ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9f17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480163.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 466 bits (235), Expect = e-128 Identities = 364/409 (88%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 169 ccgtgcccatgacggtcttctggctcatcccgcagnnnnnnnnngtcggcgccggcgagg 228 ||||||||||||| || |||||||| ||||||||| |||||||||||||||| Sbjct: 1406 ccgtgcccatgaccgtgttctggctgatcccgcagttcctgttcgtcggcgccggcgagg 1465 Query: 229 ccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaaga 288 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1466 cgttcacctacatcggccagctcgacttcttcctccgcgagtgccccaaggggatgaaga 1525 Query: 289 ccatgagcacggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgc 348 | |||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 1526 cgatgagcacggggctgttcctgagcacgctctcgctggggttcttcgtcagctcggcgc 1585 Query: 349 tcgtcaccgtcgtacacaagatcaccggtgaccgccggccgtggatcgccgacgacctca 408 ||||| ||| ||| |||||| ||||||| ||||||| || ||| ||||||||||||||| Sbjct: 1586 tcgtcgccgccgtccacaagctcaccggcgaccgccacccctggctcgccgacgacctca 1645 Query: 409 acaagggcgagctctacaagttctactggctgctcgccggggtctgcctcgccaacctcg 468 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 1646 acaagggccagctccacaagttctactggctcctcgccggcgtctgcctcgccaacctcc 1705 Query: 469 tcgtctacctcttcgccgccaggtggtacaagtacaaggccggccgccccggcgccgacg 528 |||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||| || Sbjct: 1706 tcgtatacctcgtcgccgccaggtggtacaagtacaaggccggccgcgccgccgccgccg 1765 Query: 529 gcagcgtaacggcgtcgagatggccgacgccgagccgtgccttcactga 577 || || ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1766 gcgacg--gcggcgtcgagatggccgacgccgagccatgcctccactga 1812 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 29 ggcaacccgcacgggctcaccccgctccagcggnatcggcatcggtctcgtgctctccat 88 ||||||||||||||||||||||||||||||| | |||||| |||| || ||||| ||||| Sbjct: 1267 ggcaacccgcacgggctcaccccgctccagc-gcatcggcgtcgggctggtgctgtccat 1325 Query: 89 ccttgccatg 98 | | |||||| Sbjct: 1326 cgtcgccatg 1335
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 466 bits (235), Expect = e-128 Identities = 364/409 (88%), Gaps = 2/409 (0%) Strand = Plus / Minus Query: 169 ccgtgcccatgacggtcttctggctcatcccgcagnnnnnnnnngtcggcgccggcgagg 228 ||||||||||||| || |||||||| ||||||||| |||||||||||||||| Sbjct: 3176815 ccgtgcccatgaccgtgttctggctgatcccgcagttcctgttcgtcggcgccggcgagg 3176756 Query: 229 ccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaaga 288 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3176755 cgttcacctacatcggccagctcgacttcttcctccgcgagtgccccaaggggatgaaga 3176696 Query: 289 ccatgagcacggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgc 348 | |||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 3176695 cgatgagcacggggctgttcctgagcacgctctcgctggggttcttcgtcagctcggcgc 3176636 Query: 349 tcgtcaccgtcgtacacaagatcaccggtgaccgccggccgtggatcgccgacgacctca 408 ||||| ||| ||| |||||| ||||||| ||||||| || ||| ||||||||||||||| Sbjct: 3176635 tcgtcgccgccgtccacaagctcaccggcgaccgccacccctggctcgccgacgacctca 3176576 Query: 409 acaagggcgagctctacaagttctactggctgctcgccggggtctgcctcgccaacctcg 468 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 3176575 acaagggccagctccacaagttctactggctcctcgccggcgtctgcctcgccaacctcc 3176516 Query: 469 tcgtctacctcttcgccgccaggtggtacaagtacaaggccggccgccccggcgccgacg 528 |||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||| || Sbjct: 3176515 tcgtatacctcgtcgccgccaggtggtacaagtacaaggccggccgcgccgccgccgccg 3176456 Query: 529 gcagcgtaacggcgtcgagatggccgacgccgagccgtgccttcactga 577 || || ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 3176455 gcgacg--gcggcgtcgagatggccgacgccgagccatgcctccactga 3176409 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 29 ggcaacccgcacgggctcaccccgctccagcggnatcggcatcggtctcgtgctctccat 88 ||||||||||||||||||||||||||||||| | |||||| |||| || ||||| ||||| Sbjct: 3176954 ggcaacccgcacgggctcaccccgctccagc-gcatcggcgtcgggctggtgctgtccat 3176896 Query: 89 ccttgccatg 98 | | |||||| Sbjct: 3176895 cgtcgccatg 3176886 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Minus Query: 389 gtggatcgccgacgacctcaacaagggcgagctctacaagttctactggctgctcgccgg 448 |||| |||||||||||||| || ||| | ||| || | |||||||||||||||||||| Sbjct: 26262507 gtggttcgccgacgacctcgaccgcggccacctcgactacttctactggctgctcgccgg 26262448
>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1177_E11 Length = 92375 Score = 466 bits (235), Expect = e-128 Identities = 364/409 (88%), Gaps = 2/409 (0%) Strand = Plus / Minus Query: 169 ccgtgcccatgacggtcttctggctcatcccgcagnnnnnnnnngtcggcgccggcgagg 228 ||||||||||||| || |||||||| ||||||||| |||||||||||||||| Sbjct: 32895 ccgtgcccatgaccgtgttctggctgatcccgcagttcctgttcgtcggcgccggcgagg 32836 Query: 229 ccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaaga 288 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32835 cgttcacctacatcggccagctcgacttcttcctccgcgagtgccccaaggggatgaaga 32776 Query: 289 ccatgagcacggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgc 348 | |||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 32775 cgatgagcacggggctgttcctgagcacgctctcgctggggttcttcgtcagctcggcgc 32716 Query: 349 tcgtcaccgtcgtacacaagatcaccggtgaccgccggccgtggatcgccgacgacctca 408 ||||| ||| ||| |||||| ||||||| ||||||| || ||| ||||||||||||||| Sbjct: 32715 tcgtcgccgccgtccacaagctcaccggcgaccgccacccctggctcgccgacgacctca 32656 Query: 409 acaagggcgagctctacaagttctactggctgctcgccggggtctgcctcgccaacctcg 468 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 32655 acaagggccagctccacaagttctactggctcctcgccggcgtctgcctcgccaacctcc 32596 Query: 469 tcgtctacctcttcgccgccaggtggtacaagtacaaggccggccgccccggcgccgacg 528 |||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||| || Sbjct: 32595 tcgtatacctcgtcgccgccaggtggtacaagtacaaggccggccgcgccgccgccgccg 32536 Query: 529 gcagcgtaacggcgtcgagatggccgacgccgagccgtgccttcactga 577 || || ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 32535 gcgacg--gcggcgtcgagatggccgacgccgagccatgcctccactga 32489 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 29 ggcaacccgcacgggctcaccccgctccagcggnatcggcatcggtctcgtgctctccat 88 ||||||||||||||||||||||||||||||| | |||||| |||| || ||||| ||||| Sbjct: 33034 ggcaacccgcacgggctcaccccgctccagc-gcatcggcgtcgggctggtgctgtccat 32976 Query: 89 ccttgccatg 98 | | |||||| Sbjct: 32975 cgtcgccatg 32966
>dbj|AK120196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036I24, full insert sequence Length = 3511 Score = 466 bits (235), Expect = e-128 Identities = 364/409 (88%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 169 ccgtgcccatgacggtcttctggctcatcccgcagnnnnnnnnngtcggcgccggcgagg 228 ||||||||||||| || |||||||| ||||||||| |||||||||||||||| Sbjct: 2869 ccgtgcccatgaccgtgttctggctgatcccgcagttcctgttcgtcggcgccggcgagg 2928 Query: 229 ccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaaga 288 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2929 cgttcacctacatcggccagctcgacttcttcctccgcgagtgccccaaggggatgaaga 2988 Query: 289 ccatgagcacggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgc 348 | |||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 2989 cgatgagcacggggctgttcctgagcacgctctcgctggggttcttcgtcagctcggcgc 3048 Query: 349 tcgtcaccgtcgtacacaagatcaccggtgaccgccggccgtggatcgccgacgacctca 408 ||||| ||| ||| |||||| ||||||| ||||||| || ||| ||||||||||||||| Sbjct: 3049 tcgtcgccgccgtccacaagctcaccggcgaccgccacccctggctcgccgacgacctca 3108 Query: 409 acaagggcgagctctacaagttctactggctgctcgccggggtctgcctcgccaacctcg 468 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 3109 acaagggccagctccacaagttctactggctcctcgccggcgtctgcctcgccaacctcc 3168 Query: 469 tcgtctacctcttcgccgccaggtggtacaagtacaaggccggccgccccggcgccgacg 528 |||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||| || Sbjct: 3169 tcgtatacctcgtcgccgccaggtggtacaagtacaaggccggccgcgccgccgccgccg 3228 Query: 529 gcagcgtaacggcgtcgagatggccgacgccgagccgtgccttcactga 577 || || ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 3229 gcgacg--gcggcgtcgagatggccgacgccgagccatgcctccactga 3275 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 29 ggcaacccgcacgggctcaccccgctccagcggnatcggcatcggtctcgtgctctccat 88 ||||||||||||||||||||| ||||||||| | |||||| |||| || ||||| ||||| Sbjct: 2730 ggcaacccgcacgggctcaccacgctccagc-gcatcggcgtcgggctggtgctgtccat 2788 Query: 89 ccttgccatg 98 | | |||||| Sbjct: 2789 cgtcgccatg 2798
>dbj|AK070077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045B01, full insert sequence Length = 1991 Score = 466 bits (235), Expect = e-128 Identities = 364/409 (88%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 169 ccgtgcccatgacggtcttctggctcatcccgcagnnnnnnnnngtcggcgccggcgagg 228 ||||||||||||| || |||||||| ||||||||| |||||||||||||||| Sbjct: 1173 ccgtgcccatgaccgtgttctggctgatcccgcagttcctgttcgtcggcgccggcgagg 1232 Query: 229 ccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaaga 288 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 cgttcacctacatcggccagctcgacttcttcctccgcgagtgccccaaggggatgaaga 1292 Query: 289 ccatgagcacggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgc 348 | |||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 1293 cgatgagcacggggctgttcctgagcacgctctcgctggggttcttcgtcagctcggcgc 1352 Query: 349 tcgtcaccgtcgtacacaagatcaccggtgaccgccggccgtggatcgccgacgacctca 408 ||||| ||| ||| |||||| ||||||| ||||||| || ||| ||||||||||||||| Sbjct: 1353 tcgtcgccgccgtccacaagctcaccggcgaccgccacccctggctcgccgacgacctca 1412 Query: 409 acaagggcgagctctacaagttctactggctgctcgccggggtctgcctcgccaacctcg 468 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 1413 acaagggccagctccacaagttctactggctcctcgccggcgtctgcctcgccaacctcc 1472 Query: 469 tcgtctacctcttcgccgccaggtggtacaagtacaaggccggccgccccggcgccgacg 528 |||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||| || Sbjct: 1473 tcgtatacctcgtcgccgccaggtggtacaagtacaaggccggccgcgccgccgccgccg 1532 Query: 529 gcagcgtaacggcgtcgagatggccgacgccgagccgtgccttcactga 577 || || ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1533 gcgacg--gcggcgtcgagatggccgacgccgagccatgcctccactga 1579 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 29 ggcaacccgcacgggctcaccccgctccagcggnatcggcatcggtctcgtgctctccat 88 ||||||||||||||||||||||||||||||| | |||||| |||| || ||||| ||||| Sbjct: 1034 ggcaacccgcacgggctcaccccgctccagc-gcatcggcgtcgggctggtgctgtccat 1092 Query: 89 ccttgccatg 98 | | |||||| Sbjct: 1093 cgtcgccatg 1102
>dbj|AK061227.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A01, full insert sequence Length = 1014 Score = 458 bits (231), Expect = e-125 Identities = 363/409 (88%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 169 ccgtgcccatgacggtcttctggctcatcccgcagnnnnnnnnngtcggcgccggcgagg 228 ||||||||||||| || |||||||| ||||||||| |||||||||||||||| Sbjct: 196 ccgtgcccatgaccgtgttctggctgatcccgcagttcctgttcgtcggcgccggcgagg 255 Query: 229 ccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaaga 288 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 cgttcacctacatcggccagctcgacttcttcctccgcgagtgccccaaggggatgaaga 315 Query: 289 ccatgagcacggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgc 348 | |||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 316 cgatgagcacggggctgttcctgagcacgctctcgctggggttcttcgtcagctcggcgc 375 Query: 349 tcgtcaccgtcgtacacaagatcaccggtgaccgccggccgtggatcgccgacgacctca 408 ||||| ||| ||| |||||| ||||||| ||||||| || ||| ||||||||||||||| Sbjct: 376 tcgtcgccgccgtccacaagctcaccggcgaccgccacccctggctcgccgacgacctca 435 Query: 409 acaagggcgagctctacaagttctactggctgctcgccggggtctgcctcgccaacctcg 468 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 436 acaagggccagctccacaagttctactggctcctcgccggcgtctgcctcgccaacctcc 495 Query: 469 tcgtctacctcttcgccgccaggtggtacaagtacaaggccggccgccccggcgccgacg 528 |||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||| || Sbjct: 496 tcgtatacctcgtcgccgccaggtggtacaagtacaaggccggccgcgccgccgccgccg 555 Query: 529 gcagcgtaacggcgtcgagatggccgacgccgagccgtgccttcactga 577 || || |||||||||||||||||||||| |||| ||||| |||||| Sbjct: 556 gcgacg--gcggcgtcgagatggccgacgccaagccatgcctccactga 602 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 29 ggcaacccgcacgggctcaccccgctccagcggnatcggcatcggtctcgtgctctccat 88 ||||||||||||||||||||||||||||||| | |||||| |||| || ||||| ||||| Sbjct: 57 ggcaacccgcacgggctcaccccgctccagc-gcatcggcgtcgggctggtgctgtccat 115 Query: 89 ccttgccatg 98 | | |||||| Sbjct: 116 cgtcgccatg 125
>gb|AY107863.1| Zea mays PCO098705 mRNA sequence Length = 806 Score = 369 bits (186), Expect = 7e-99 Identities = 337/389 (86%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 170 cgtgcccatgacggtcttctggctcatcccgcagnnnnnnnnngtcggcgccggcgaggc 229 |||||||||| | || |||||||||||||||||| || || || |||||||| Sbjct: 50 cgtgcccatgtccgtgttctggctcatcccgcagttcttcctcgtgggggcgggcgaggc 109 Query: 230 cttcacctacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaagac 289 ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 110 gttcacgtacatcggccagctcgacttcttcctgcgcgagtgccccaaggggatgaagac 169 Query: 290 catgagcacggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgct 349 ||||||||||||||| ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 170 catgagcacggggctgttcctcagcaccctgtcgctgggattcttcgtcagctccgcgct 229 Query: 350 cgtcaccgtcgtacacaagatcaccggtgaccgccggccgtggatcgccgacgacctcaa 409 |||| ||| ||| |||| | |||| || ||||||| || ||||||||| |||||||||| Sbjct: 230 cgtcgccgccgtgcacagggtcacgggcgaccgccacccctggatcgccaacgacctcaa 289 Query: 410 caagggcgagctctacaagttctactggctgctcgccggggtctgcctcgccaacctcgt 469 ||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||| | Sbjct: 290 caagggccgcctcgacaacttctactggctgctcgccgccgtctgcctcgccaacctact 349 Query: 470 cgtctacctcttcgccgccaggtggtacaagtacaaggccggccgccccggcgccgacgg 529 ||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 350 agtctacctcgtcgccgcccgctggtacaagtacaaggcgggccgccccggcgccgacgg 409 Query: 530 cagcgt-aacggcgtcgagatggccgacg 557 |||||| |||||||||||||||||||||| Sbjct: 410 cagcgtcaacggcgtcgagatggccgacg 438
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 210 bits (106), Expect = 4e-51 Identities = 145/158 (91%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 183487 ggcgccggcgaggccttcacctacatcgggcagctggacttcttcctgcgcgagtgcccc 183546 Query: 276 aaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttcttc 335 |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 183547 aaggggatgaagaccatgagcacgggcctgttcctgagcacgctctcgctgggcttcttc 183606 Query: 336 gtcagctcggcgctcgtcaccgtcgtacacaagatcac 373 ||||| ||||||| |||||||| || |||||| |||| Sbjct: 183607 ttcagcacggcgctggtcaccgtggtgcacaaggtcac 183644 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 34270828 ttctactggcttctcgcctgcatcggcgtcgccaacctcgtcttctac 34270781
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 210 bits (106), Expect = 4e-51 Identities = 145/158 (91%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 20554 ggcgccggcgaggccttcacctacatcgggcagctggacttcttcctgcgcgagtgcccc 20613 Query: 276 aaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttcttc 335 |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 20614 aaggggatgaagaccatgagcacgggcctgttcctgagcacgctctcgctgggcttcttc 20673 Query: 336 gtcagctcggcgctcgtcaccgtcgtacacaagatcac 373 ||||| ||||||| |||||||| || |||||| |||| Sbjct: 20674 ttcagcacggcgctggtcaccgtggtgcacaaggtcac 20711
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 210 bits (106), Expect = 4e-51 Identities = 145/158 (91%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 117487 ggcgccggcgaggccttcacctacatcgggcagctggacttcttcctgcgcgagtgcccc 117546 Query: 276 aaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttcttc 335 |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 117547 aaggggatgaagaccatgagcacgggcctgttcctgagcacgctctcgctgggcttcttc 117606 Query: 336 gtcagctcggcgctcgtcaccgtcgtacacaagatcac 373 ||||| ||||||| |||||||| || |||||| |||| Sbjct: 117607 ttcagcacggcgctggtcaccgtggtgcacaaggtcac 117644
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 210 bits (106), Expect = 4e-51 Identities = 145/158 (91%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 183487 ggcgccggcgaggccttcacctacatcgggcagctggacttcttcctgcgcgagtgcccc 183546 Query: 276 aaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttcttc 335 |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 183547 aaggggatgaagaccatgagcacgggcctgttcctgagcacgctctcgctgggcttcttc 183606 Query: 336 gtcagctcggcgctcgtcaccgtcgtacacaagatcac 373 ||||| ||||||| |||||||| || |||||| |||| Sbjct: 183607 ttcagcacggcgctggtcaccgtggtgcacaaggtcac 183644 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 34361300 ttctactggcttctcgcctgcatcggcgtcgccaacctcgtcttctac 34361253
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 210 bits (106), Expect = 4e-51 Identities = 145/158 (91%) Strand = Plus / Minus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 79167 ggcgccggcgaggccttcacctacatcgggcagctggacttcttcctgcgcgagtgcccc 79108 Query: 276 aaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttcttc 335 |||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 79107 aaggggatgaagaccatgagcacgggcctgttcctgagcacgctctcgctgggcttcttc 79048 Query: 336 gtcagctcggcgctcgtcaccgtcgtacacaagatcac 373 ||||| ||||||| |||||||| || |||||| |||| Sbjct: 79047 ttcagcacggcgctggtcaccgtggtgcacaaggtcac 79010
>ref|NM_197689.1| Oryza sativa (japonica cultivar-group) putative nitrate transporter (OSJNBb0014I11.9), mRNA Length = 2288 Score = 182 bits (92), Expect = 9e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 213 gtcggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc 272 ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1417 gtcggcgccggcgaggcgttcacctacatgggccagctcgacttcttcctccgcgagtgc 1476 Query: 273 cccaaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttc 332 ||||||||||||||||||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 1477 cccaaggggatgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttc 1536 Query: 333 ttcgtcagctcggcgctcgtcaccgtcgtacacaagatcaccgg 376 ||| ||||| || |||||||||| |||| |||||| ||||||| Sbjct: 1537 ttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccgg 1580 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 31 caacccgcacgggctcaccccgctccagcg 60 |||||||||||| ||||||||||||||||| Sbjct: 1251 caacccgcacggcctcaccccgctccagcg 1280
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 182 bits (92), Expect = 9e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 213 gtcggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc 272 ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 94887 gtcggcgccggcgaggcgttcacctacatgggccagctcgacttcttcctccgcgagtgc 94946 Query: 273 cccaaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttc 332 ||||||||||||||||||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 94947 cccaaggggatgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttc 95006 Query: 333 ttcgtcagctcggcgctcgtcaccgtcgtacacaagatcaccgg 376 ||| ||||| || |||||||||| |||| |||||| ||||||| Sbjct: 95007 ttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccgg 95050 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 31 caacccgcacgggctcaccccgctccagcg 60 |||||||||||| ||||||||||||||||| Sbjct: 94721 caacccgcacggcctcaccccgctccagcg 94750
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 182 bits (92), Expect = 9e-43 Identities = 146/164 (89%) Strand = Plus / Minus Query: 213 gtcggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc 272 ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 21239472 gtcggcgccggcgaggcgttcacctacatgggccagctcgacttcttcctccgcgagtgc 21239413 Query: 273 cccaaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttc 332 ||||||||||||||||||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 21239412 cccaaggggatgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttc 21239353 Query: 333 ttcgtcagctcggcgctcgtcaccgtcgtacacaagatcaccgg 376 ||| ||||| || |||||||||| |||| |||||| ||||||| Sbjct: 21239352 ttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccgg 21239309 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 31 caacccgcacgggctcaccccgctccagcg 60 |||||||||||| ||||||||||||||||| Sbjct: 21239638 caacccgcacggcctcaccccgctccagcg 21239609 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 390 tggatcgccgacgacctcaacaaggg 415 |||||| ||||||||||||||||||| Sbjct: 767262 tggatccccgacgacctcaacaaggg 767237
>dbj|AK068409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147D24, full insert sequence Length = 2149 Score = 182 bits (92), Expect = 9e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 213 gtcggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc 272 ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1516 gtcggcgccggcgaggcgttcacctacatgggccagctcgacttcttcctccgcgagtgc 1575 Query: 273 cccaaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttc 332 ||||||||||||||||||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 1576 cccaaggggatgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttc 1635 Query: 333 ttcgtcagctcggcgctcgtcaccgtcgtacacaagatcaccgg 376 ||| ||||| || |||||||||| |||| |||||| ||||||| Sbjct: 1636 ttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccgg 1679 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 31 caacccgcacgggctcaccccgctccagcg 60 |||||||||||| ||||||||||||||||| Sbjct: 1350 caacccgcacggcctcaccccgctccagcg 1379
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 182 bits (92), Expect = 9e-43 Identities = 146/164 (89%) Strand = Plus / Minus Query: 213 gtcggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc 272 ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 21250736 gtcggcgccggcgaggcgttcacctacatgggccagctcgacttcttcctccgcgagtgc 21250677 Query: 273 cccaaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttc 332 ||||||||||||||||||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 21250676 cccaaggggatgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttc 21250617 Query: 333 ttcgtcagctcggcgctcgtcaccgtcgtacacaagatcaccgg 376 ||| ||||| || |||||||||| |||| |||||| ||||||| Sbjct: 21250616 ttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccgg 21250573 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 31 caacccgcacgggctcaccccgctccagcg 60 |||||||||||| ||||||||||||||||| Sbjct: 21250902 caacccgcacggcctcaccccgctccagcg 21250873 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 390 tggatcgccgacgacctcaacaaggg 415 |||||| ||||||||||||||||||| Sbjct: 767259 tggatccccgacgacctcaacaaggg 767234
>dbj|AK105765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E01, full insert sequence Length = 2001 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 213 gtcggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc 272 ||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||| Sbjct: 1123 gtcggcgccggcgaggcgttcacctacatgggccagctcggcttcttcctccgcgagtgc 1182 Query: 273 cccaaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttc 332 ||||||||| ||||||||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 1183 cccaagggggtgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttc 1242 Query: 333 ttcgtcagctcggcgctcgtcaccgtcgtacacaagatcaccgg 376 ||| ||||| || |||||||||| |||| |||||| ||||||| Sbjct: 1243 ttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccgg 1286 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 31 caacccgcacgggctcaccccgctccagcg 60 |||||||||||| ||||||||||||||||| Sbjct: 957 caacccgcacggcctcaccccgctccagcg 986
>ref|NM_193465.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1701 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc-cc 274 |||||||||||||| |||| ||||| || ||||| ||||||||| || |||| | || Sbjct: 1357 ggcgccggcgaggcgttcatctacacggggcagctggacttcttcatca-cgaggtcgcc 1415 Query: 275 caaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttctt 334 ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1416 caaggggatgaagacgatgagcacggggctcttcctgacgacgctctcgctcggcttctt 1475 Query: 335 cgtcagc 341 | ||||| Sbjct: 1476 cttcagc 1482 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 63 atcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgctcgtcgagatc 122 ||||||||||| |||| ||||||||||| | |||| || ||||||||||| ||||| Sbjct: 1210 atcggcatcggcctcgccctctccatcctcggcatggccgccgccgcgctctgcgagaag 1269 Query: 123 aagcgcctc 131 ||||||||| Sbjct: 1270 aagcgcctc 1278
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc-cc 274 |||||||||||||| |||| ||||| || ||||| ||||||||| || |||| | || Sbjct: 21036587 ggcgccggcgaggcgttcatctacacggggcagctggacttcttcatca-cgaggtcgcc 21036645 Query: 275 caaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttctt 334 ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 21036646 caaggggatgaagacgatgagcacggggctcttcctgacgacgctctcgctcggcttctt 21036705 Query: 335 cgtcagc 341 | ||||| Sbjct: 21036706 cttcagc 21036712 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | ||||| |||||||| ||| || ||||||| || ||| Sbjct: 39303468 ttcttctggctgctcgccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgca 39303527 Query: 489 aggtggtacaagtacaag 506 ||||||||| ||||||| Sbjct: 39303528 cggtggtacacgtacaag 39303545 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 63 atcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgctcgtcgagatc 122 ||||||||||| |||| ||||||||||| | |||| || ||||||||||| ||||| Sbjct: 21036440 atcggcatcggcctcgccctctccatcctcggcatggccgccgccgcgctctgcgagaag 21036499 Query: 123 aagcgcctc 131 ||||||||| Sbjct: 21036500 aagcgcctc 21036508 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | || ||||| |||| ||| |||||||||| || |||| Sbjct: 2296842 ttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgcc 2296901 Query: 489 aggtggtaca 498 || ||||||| Sbjct: 2296902 agctggtaca 2296911 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 16209711 ttctactggcttctcgcctgcatcggcatcgccaacctcgtcttctac 16209758
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc-cc 274 |||||||||||||| |||| ||||| || ||||| ||||||||| || |||| | || Sbjct: 4132 ggcgccggcgaggcgttcatctacacggggcagctggacttcttcatca-cgaggtcgcc 4190 Query: 275 caaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttctt 334 ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 4191 caaggggatgaagacgatgagcacggggctcttcctgacgacgctctcgctcggcttctt 4250 Query: 335 cgtcagc 341 | ||||| Sbjct: 4251 cttcagc 4257 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 63 atcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgctcgtcgagatc 122 ||||||||||| |||| ||||||||||| | |||| || ||||||||||| ||||| Sbjct: 3985 atcggcatcggcctcgccctctccatcctcggcatggccgccgccgcgctctgcgagaag 4044 Query: 123 aagcgcctc 131 ||||||||| Sbjct: 4045 aagcgcctc 4053
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgc-cc 274 |||||||||||||| |||| ||||| || ||||| ||||||||| || |||| | || Sbjct: 99789 ggcgccggcgaggcgttcatctacacggggcagctggacttcttcatca-cgaggtcgcc 99847 Query: 275 caaggggatgaagaccatgagcacggggctcttccttagcacgctctcgctcggcttctt 334 ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 99848 caaggggatgaagacgatgagcacggggctcttcctgacgacgctctcgctcggcttctt 99907 Query: 335 cgtcagc 341 | ||||| Sbjct: 99908 cttcagc 99914 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 63 atcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgctcgtcgagatc 122 ||||||||||| |||| ||||||||||| | |||| || ||||||||||| ||||| Sbjct: 99642 atcggcatcggcctcgccctctccatcctcggcatggccgccgccgcgctctgcgagaag 99701 Query: 123 aagcgcctc 131 ||||||||| Sbjct: 99702 aagcgcctc 99710
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 222 ggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaagggg 281 |||||||||||||| |||||||| ||||| ||||||||| | | ||||||||||||||| Sbjct: 5522560 ggcgaggccttcacatacatcgg-cagctagacttcttcttgcacgagtgccccaagggc 5522502 Query: 282 atgaagaccatgagca 297 |||||||||||||||| Sbjct: 5522501 atgaagaccatgagca 5522486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| |||| ||||| || |||||| |||||||| || Sbjct: 22390001 ggcgccggcgaggcgttcgcgtacgtcgggcagctggagttcttcatccgcgaggcgccg 22389942 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| | |||||||||||||||||||| Sbjct: 22389941 gagcggatgaagtcgatgagcacggggctcttcct 22389907 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 28771094 gtggatctccgacgacctcaaccagggc 28771121
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 87.7 bits (44), Expect = 4e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 222 ggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaagggg 281 |||||||||||||| |||||||| ||||| ||||||||| | | ||||||||||||||| Sbjct: 67295 ggcgaggccttcacatacatcgg-cagctagacttcttcttgcacgagtgccccaagggc 67237 Query: 282 atgaagaccatgagca 297 |||||||||||||||| Sbjct: 67236 atgaagaccatgagca 67221
>dbj|AB128925.1| Prunus persica PpNRT1 gene for nitrate transporter, partial cds Length = 3608 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 220 ccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaagg 279 |||| ||||||||||| || || || ||||| |||||||||||| | |||||||| |||| Sbjct: 3267 ccggggaggccttcacatatattgggcagcttgacttcttcctcagggagtgccctaagg 3326 Query: 280 ggatgaagaccatgagcac 298 ||||||||||||||||||| Sbjct: 3327 ggatgaagaccatgagcac 3345
>dbj|AB089677.1| Prunus persica PpNRT1 mRNA for nitrate transporter, complete cds Length = 2093 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 220 ccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgccccaagg 279 |||| ||||||||||| || || || ||||| |||||||||||| | |||||||| |||| Sbjct: 1528 ccggggaggccttcacatatattgggcagcttgacttcttcctcagggagtgccctaagg 1587 Query: 280 ggatgaagaccatgagcac 298 ||||||||||||||||||| Sbjct: 1588 ggatgaagaccatgagcac 1606
>gb|AF420016.1| Narcissus pseudonarcissus putative low-affinity nitrate transporter mRNA, partial cds Length = 371 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 237 tacatcggacagctcgacttcttcctccgcgagtgccccaaggggatgaagaccatgagc 296 |||||||||||| | || |||||| | | ||||||||||||||||||||||| |||||| Sbjct: 68 tacatcggacagttggatttcttcttgagggagtgccccaaggggatgaagactatgagc 127 Query: 297 acggggctcttccttagcacgctctcgctcggcttcttcgtcagctcggcgctcgtcacc 356 || ||| | || |||||||| || || | || |||||| | |||||||||||||| ||| Sbjct: 128 accgggatgtttcttagcacactatctttaggtttcttccttagctcggcgctcgtgacc 187 Query: 357 gtcgt 361 |||| Sbjct: 188 atcgt 192
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| |||| ||||| || |||||| |||||||| || Sbjct: 148645 ggcgccggcgaggcgttcgcgtacgtcgggcagctggagttcttcatccgcgaggcgccg 148586 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| | |||||||||||||||||||| Sbjct: 148585 gagcggatgaagtcgatgagcacggggctcttcct 148551
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| |||| ||||| || |||||| |||||||| || Sbjct: 46220 ggcgccggcgaggcgttcgcgtacgtcgggcagctggagttcttcatccgcgaggcgccg 46161 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| | |||||||||||||||||||| Sbjct: 46160 gagcggatgaagtcgatgagcacggggctcttcct 46126
>dbj|AK120486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113P19, full insert sequence Length = 2206 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| |||| ||||| || |||||| |||||||| || Sbjct: 1528 ggcgccggcgaggcgttcgcgtacgtcgggcagctggagttcttcatccgcgaggcgccg 1587 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| | |||||||||||||||||||| Sbjct: 1588 gagcggatgaagtcgatgagcacggggctcttcct 1622
>dbj|AK072036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106D24, full insert sequence Length = 1500 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| |||| ||||| || |||||| |||||||| || Sbjct: 877 ggcgccggcgaggcgttcgcgtacgtcgggcagctggagttcttcatccgcgaggcgccg 936 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| | |||||||||||||||||||| Sbjct: 937 gagcggatgaagtcgatgagcacggggctcttcct 971
>ref|NM_190326.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1674 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | ||||| |||||||| ||| || ||||||| || ||| Sbjct: 1582 ttcttctggctgctcgccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgca 1641 Query: 489 aggtggtacaagtacaag 506 ||||||||| ||||||| Sbjct: 1642 cggtggtacacgtacaag 1659
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | ||||| |||||||| ||| || ||||||| || ||| Sbjct: 105174 ttcttctggctgctcgccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgca 105233 Query: 489 aggtggtacaagtacaag 506 ||||||||| ||||||| Sbjct: 105234 cggtggtacacgtacaag 105251
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | ||||| |||||||| ||| || ||||||| || ||| Sbjct: 84714 ttcttctggctgctcgccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgca 84773 Query: 489 aggtggtacaagtacaag 506 ||||||||| ||||||| Sbjct: 84774 cggtggtacacgtacaag 84791
>emb|AJ495773.1|HVU495773 Hordeum vulgare partial mRNA for putative peptide transporter protein Length = 411 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||||||||| Sbjct: 49 gtggatctccgacgacctcaacaagggc 76
>ref|XM_472779.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1779 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Plus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| | || ||||| || |||||| || | ||| |||| Sbjct: 1405 ggcgccggcgaggcgttcgcgtacgtggggcagctggagttcttcatcagggaggccccc 1464 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| ||||||||||||| || ||||| Sbjct: 1465 gagcggatgaagtccatgagcacgggcctgttcct 1499
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Minus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| | || ||||| || |||||| || | ||| |||| Sbjct: 43880 ggcgccggcgaggcgttcgcgtacgtggggcagctggagttcttcatcagggaggccccc 43821 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| ||||||||||||| || ||||| Sbjct: 43820 gagcggatgaagtccatgagcacgggcctgttcct 43786
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Minus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| | || ||||| || |||||| || | ||| |||| Sbjct: 23153688 ggcgccggcgaggcgttcgcgtacgtggggcagctggagttcttcatcagggaggccccc 23153629 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| ||||||||||||| || ||||| Sbjct: 23153628 gagcggatgaagtccatgagcacgggcctgttcct 23153594 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccgg 448 |||||||||||||||||||| Sbjct: 35398331 ttctactggctgctcgccgg 35398350
>dbj|AK111143.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E04, full insert sequence Length = 1039 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Minus Query: 216 ggcgccggcgaggccttcacctacatcggacagctcgacttcttcctccgcgagtgcccc 275 |||||||||||||| ||| | ||| | || ||||| || |||||| || | ||| |||| Sbjct: 440 ggcgccggcgaggcgttcgcgtacgtggggcagctggagttcttcatcagggaggccccc 381 Query: 276 aaggggatgaagaccatgagcacggggctcttcct 310 || |||||||| ||||||||||||| || ||||| Sbjct: 380 gagcggatgaagtccatgagcacgggcctgttcct 346
>gb|AY112123.1| Zea mays CL32673_1 mRNA sequence Length = 611 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 429 ttctactggctgctcgccggggtctgc 455 ||||||||||||||||||||| ||||| Sbjct: 327 ttctactggctgctcgccgggctctgc 301
>ref|NM_194571.1| Oryza sativa (japonica cultivar-group) putative LeOPT1 - oligopeptide transporter (OSJNBb0012A20.8), mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 390 tggatcgccgacgacctcaacaaggg 415 |||||| ||||||||||||||||||| Sbjct: 1606 tggatccccgacgacctcaacaaggg 1631
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 390 tggatcgccgacgacctcaacaaggg 415 |||||| ||||||||||||||||||| Sbjct: 48119 tggatccccgacgacctcaacaaggg 48094
>ref|XM_773982.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_49_97404_97033) partial mRNA Length = 372 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 409 acaagggcgagctctacaagttctac 434 |||||| ||||||||||||||||||| Sbjct: 110 acaaggccgagctctacaagttctac 85
>ref|XM_773983.1| Giardia lamblia ATCC 50803 splicing factor (GLP_49_97129_97710) partial mRNA Length = 582 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 acaagggcgagctctacaagttctac 434 |||||| ||||||||||||||||||| Sbjct: 167 acaaggccgagctctacaagttctac 192
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 390 tggatcgccgacgacctcaacaaggg 415 |||||| ||||||||||||||||||| Sbjct: 767262 tggatccccgacgacctcaacaaggg 767237
>ref|NM_184319.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1984 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | || ||||| |||| ||| |||||||||| || |||| Sbjct: 1718 ttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgcc 1777 Query: 489 aggtggtaca 498 || ||||||| Sbjct: 1778 agctggtaca 1787
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 541 cgtcgagatggccgacgccgagccgt 566 |||||||||||| ||||||||||||| Sbjct: 826734 cgtcgagatggcagacgccgagccgt 826709
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | || ||||| |||| ||| |||||||||| || |||| Sbjct: 25892 ttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgcc 25951 Query: 489 aggtggtaca 498 || ||||||| Sbjct: 25952 agctggtaca 25961
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | || ||||| |||| ||| |||||||||| || |||| Sbjct: 80426 ttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgcc 80485 Query: 489 aggtggtaca 498 || ||||||| Sbjct: 80486 agctggtaca 80495
>dbj|AK102216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L04, full insert sequence Length = 3090 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | || ||||| |||| ||| |||||||||| || |||| Sbjct: 2837 ttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgcc 2896 Query: 489 aggtggtaca 498 || ||||||| Sbjct: 2897 agctggtaca 2906
>ref|NM_210314.1| Eremothecium gossypii AER100Cp (AER100C), mRNA Length = 465 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 541 cgtcgagatggccgacgccgagccgt 566 |||||||||||| ||||||||||||| Sbjct: 420 cgtcgagatggcagacgccgagccgt 445
>dbj|AK070036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E09, full insert sequence Length = 2307 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | || ||||| |||| ||| |||||||||| || |||| Sbjct: 1820 ttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgcc 1879 Query: 489 aggtggtaca 498 || ||||||| Sbjct: 1880 agctggtaca 1889
>dbj|AK068679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C22, full insert sequence Length = 1879 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 390 tggatcgccgacgacctcaacaaggg 415 |||||| ||||||||||||||||||| Sbjct: 1534 tggatccccgacgacctcaacaaggg 1559
>dbj|AK058745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H02, full insert sequence Length = 1984 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacctcttcgccgcc 488 |||| |||||||||||||| | || ||||| |||| ||| |||||||||| || |||| Sbjct: 1718 ttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgcc 1777 Query: 489 aggtggtaca 498 || ||||||| Sbjct: 1778 agctggtaca 1787
>gb|AF023472.1|AF023472 Hordeum vulgare peptide transporter (ptr1) mRNA, complete cds Length = 2260 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctacct 478 |||| |||||||||||||| | || |||||| |||| ||| ||||||||| Sbjct: 1887 ttcttctggctgctcgccgcgctcagcctcgtcaacttcgccgtctacct 1936
>gb|DQ275145.1| Petromyzon marinus sodium channel 2 mRNA, partial cds Length = 1911 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 cggccgccccggcgccgacggcagcg 534 |||| ||||||||||||||||||||| Sbjct: 195 cggcggccccggcgccgacggcagcg 220
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 gccgacggcagcgtaacggcgtcga 546 |||||| |||||||||||||||||| Sbjct: 801333 gccgacagcagcgtaacggcgtcga 801309
>ref|XM_741225.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g01395) partial mRNA Length = 1227 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 gccgtcccggagggcgcccccgtgc 174 |||| |||||||||||||||||||| Sbjct: 784 gccgacccggagggcgcccccgtgc 808
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tccgccgtcccggagggcgcc 167 ||||||||||||||||||||| Sbjct: 7076762 tccgccgtcccggagggcgcc 7076782
>ref|NM_106099.2| Arabidopsis thaliana exonuclease AT1G74390 mRNA, complete cds Length = 1765 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 agctcgacttcttcctccgcgagt 270 |||||||||||||||||| ||||| Sbjct: 685 agctcgacttcttcctcctcgagt 708
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 cggcgccgacggcagcgtaa 537 |||||||||||||||||||| Sbjct: 1361067 cggcgccgacggcagcgtaa 1361048
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 cggcgtcgagatggccgacg 557 |||||||||||||||||||| Sbjct: 2168071 cggcgtcgagatggccgacg 2168052
>ref|XM_483444.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1530 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggcgagctctacaagttctactggctgctcgccgg 448 |||| |||||||||||||| || ||| | ||| || | |||||||||||||||||||| Sbjct: 1356 gtggttcgccgacgacctcgaccgcggccacctcgactacttctactggctgctcgccgg 1415
>ref|XM_474472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccgg 448 |||||||||||||||||||| Sbjct: 1375 ttctactggctgctcgccgg 1394
>ref|NM_185156.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1758 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 1597 ttctactggcttctcgcctgcatcggcgtcgccaacctcgtcttctac 1644
>ref|XM_467305.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1934 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 1740 gtggatctccgacgacctcaaccagggc 1767
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 cgcgctcgtcgagatcaagc 126 |||||||||||||||||||| Sbjct: 2241285 cgcgctcgtcgagatcaagc 2241304
>ref|NM_184563.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 649 ttctactggcttctcgcctgcatcggcatcgccaacctcgtcttctac 696
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 cgcgctcgtcgagatcaagc 126 |||||||||||||||||||| Sbjct: 1482161 cgcgctcgtcgagatcaagc 1482180
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 cgcgctcgtcgagatcaagc 126 |||||||||||||||||||| Sbjct: 2712684 cgcgctcgtcgagatcaagc 2712703
>gb|AE009268.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 38 of 187 of the complete sequence Length = 11208 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gctcgtcgagatcaagcgcc 129 |||||||||||||||||||| Sbjct: 718 gctcgtcgagatcaagcgcc 737
>gb|AE008344.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 148 of 187 of the complete sequence Length = 12819 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gctcgtcgagatcaagcgcc 129 |||||||||||||||||||| Sbjct: 10492 gctcgtcgagatcaagcgcc 10473
>gb|AY456034.1| Gibberella moniliformis putative histidine kinase HHK1p (HHK1) gene, complete cds Length = 7240 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cgacctcaacaagggcgagc 420 |||||||||||||||||||| Sbjct: 5206 cgacctcaacaagggcgagc 5225
>ref|XM_810113.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510747.130) partial mRNA Length = 3426 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 gccccggcgccgacggcagc 533 |||||||||||||||||||| Sbjct: 2275 gccccggcgccgacggcagc 2294
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ccgcgctcgtcgagatcaag 125 |||||||||||||||||||| Sbjct: 2359680 ccgcgctcgtcgagatcaag 2359661
>ref|XM_965770.1| PREDICTED: Tribolium castaneum similar to CG11033-PA (LOC659466), mRNA Length = 3027 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ggtcttctggctcatcccgc 201 |||||||||||||||||||| Sbjct: 711 ggtcttctggctcatcccgc 730
>gb|BT000288.1| Arabidopsis thaliana putative exonuclease (At1g74390) mRNA, complete cds Length = 1725 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 agctcgacttcttcctccgcgagt 270 |||||||||||||||||| ||||| Sbjct: 664 agctcgacttcttcctcctcgagt 687
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 cgcgctcgtcgagatcaagc 126 |||||||||||||||||||| Sbjct: 1670785 cgcgctcgtcgagatcaagc 1670766
>emb|AL807369.1|NCG15D1 Neurospora crassa DNA linkage group V cosmid contig G15D1 Length = 62178 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 caacctcgtcgtctacctct 480 |||||||||||||||||||| Sbjct: 60233 caacctcgtcgtctacctct 60214
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccgg 448 |||||||||||||||||||| Sbjct: 23134 ttctactggctgctcgccgg 23153
>emb|AL451022.1|NC2E4 Neurospora crassa DNA linkage group V Cosmid contig 2E4 Length = 62070 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 caacctcgtcgtctacctct 480 |||||||||||||||||||| Sbjct: 14115 caacctcgtcgtctacctct 14096
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8 Length = 98192 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgacctccgccgcgctcgt 115 |||||||||||||||||||| Sbjct: 83189 atgacctccgccgcgctcgt 83208
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcggcgccggcgaggccttc 233 |||||||||||||||||||| Sbjct: 377269 tcggcgccggcgaggccttc 377250
>gb|AY099717.1| Arabidopsis thaliana putative exonuclease (At1g74390) mRNA, complete cds Length = 1765 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 agctcgacttcttcctccgcgagt 270 |||||||||||||||||| ||||| Sbjct: 685 agctcgacttcttcctcctcgagt 708
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 gccccggcgccgacggcagc 533 |||||||||||||||||||| Sbjct: 90329 gccccggcgccgacggcagc 90348
>ref|XM_623385.1| PREDICTED: Apis mellifera similar to CG5701-PA (LOC413034), mRNA Length = 2225 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 atgaagaccatgagcacggg 301 |||||||||||||||||||| Sbjct: 2132 atgaagaccatgagcacggg 2113
>ref|XM_396485.2| PREDICTED: Apis mellifera similar to ENSANGP00000013437 (LOC413034), mRNA Length = 3152 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 atgaagaccatgagcacggg 301 |||||||||||||||||||| Sbjct: 3059 atgaagaccatgagcacggg 3040
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gttctactggctgctcgccg 447 |||||||||||||||||||| Sbjct: 7169484 gttctactggctgctcgccg 7169503
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 29310462 gtggatccccgacgacctcaacgagggc 29310489 Score = 40.1 bits (20), Expect = 8.1 Identities = 57/68 (83%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 52 gctccagcggnatcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgc 111 |||||||||| |||||| |||| | |||||||||||| | |||||| | |||||||| Sbjct: 7261245 gctccagcgg-atcggcgtcgggatggtgctctccatcgtcgccatggcggtcgccgcgc 7261303 Query: 112 tcgtcgag 119 |||||||| Sbjct: 7261304 tcgtcgag 7261311
>emb|BX816736.1|CNS0ADE2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1680 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 agctcgacttcttcctccgcgagt 270 |||||||||||||||||| ||||| Sbjct: 649 agctcgacttcttcctcctcgagt 672
>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete sequence Length = 134402 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 agctcgacttcttcctccgcgagt 270 |||||||||||||||||| ||||| Sbjct: 19030 agctcgacttcttcctcctcgagt 19007
>gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, complete sequence Length = 183991 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cagctcgacttcttcctccg 265 |||||||||||||||||||| Sbjct: 139083 cagctcgacttcttcctccg 139102
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 64170 ttctactggcttctcgcctgcatcggcgtcgccaacctcgtcttctac 64217
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 gtcggcgccggcgaggccttcacc 236 |||||||||||||| ||||||||| Sbjct: 75524 gtcggcgccggcgacgccttcacc 75547
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 87667 gtggatctccgacgacctcaaccagggc 87694
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 21343 gtggatccccgacgacctcaacgagggc 21370
>dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0676G08 Length = 153154 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 86118 ttctactggcttctcgcctgcatcggcatcgccaacctcgtcttctac 86165
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 73260 gtggatccccgacgacctcaacgagggc 73287
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 40.1 bits (20), Expect = 8.1 Identities = 57/68 (83%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 52 gctccagcggnatcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgc 111 |||||||||| |||||| |||| | |||||||||||| | |||||| | |||||||| Sbjct: 138656 gctccagcgg-atcggcgtcgggatggtgctctccatcgtcgccatggcggtcgccgcgc 138714 Query: 112 tcgtcgag 119 |||||||| Sbjct: 138715 tcgtcgag 138722
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 40.1 bits (20), Expect = 8.1 Identities = 57/68 (83%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 52 gctccagcggnatcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgc 111 |||||||||| |||||| |||| | |||||||||||| | |||||| | |||||||| Sbjct: 96249 gctccagcgg-atcggcgtcgggatggtgctctccatcgtcgccatggcggtcgccgcgc 96307 Query: 112 tcgtcgag 119 |||||||| Sbjct: 96308 tcgtcgag 96315
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Minus Query: 389 gtggatcgccgacgacctcaacaagggcgagctctacaagttctactggctgctcgccgg 448 |||| |||||||||||||| || ||| | ||| || | |||||||||||||||||||| Sbjct: 95432 gtggttcgccgacgacctcgaccgcggccacctcgactacttctactggctgctcgccgg 95373
>dbj|AK120737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003I19, full insert sequence Length = 2281 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gttctactggctgctcgccg 447 |||||||||||||||||||| Sbjct: 1725 gttctactggctgctcgccg 1744
>dbj|AK119527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B05, full insert sequence Length = 1762 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 1627 gtggatccccgacgacctcaacgagggc 1654
>dbj|AK109931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-B06, full insert sequence Length = 1934 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 gtggatcgccgacgacctcaacaagggc 416 ||||||| |||||||||||||| ||||| Sbjct: 1740 gtggatctccgacgacctcaaccagggc 1767
>dbj|AK099193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109G05, full insert sequence Length = 2088 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 1751 ttctactggcttctcgcctgcatcggcgtcgccaacctcgtcttctac 1798
>dbj|AK064959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A13, full insert sequence Length = 1765 Score = 40.1 bits (20), Expect = 8.1 Identities = 57/68 (83%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 52 gctccagcggnatcggcatcggtctcgtgctctccatccttgccatgacctccgccgcgc 111 |||||||||| |||||| |||| | |||||||||||| | |||||| | |||||||| Sbjct: 1195 gctccagcgg-atcggcgtcgggatggtgctctccatcgtcgccatggcggtcgccgcgc 1253 Query: 112 tcgtcgag 119 |||||||| Sbjct: 1254 tcgtcgag 1261
>dbj|AK058972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D02, full insert sequence Length = 2129 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccggggtctgcctcgccaacctcgtcgtctac 476 ||||||||||| |||||| | || || |||||||||||||| ||||| Sbjct: 1750 ttctactggcttctcgcctgcatcggcgtcgccaacctcgtcttctac 1797
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ttctactggctgctcgccgg 448 |||||||||||||||||||| Sbjct: 30041 ttctactggctgctcgccgg 30060
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 cgcgctcgtcgagatcaagc 126 |||||||||||||||||||| Sbjct: 2430730 cgcgctcgtcgagatcaagc 2430711 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 543 tcgagatggccgacgccgagccgtgcct 570 |||||||| |||||||||||||||||| Sbjct: 2045646 tcgagatgagcgacgccgagccgtgcct 2045673
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gttctactggctgctcgccg 447 |||||||||||||||||||| Sbjct: 7169363 gttctactggctgctcgccg 7169382
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gttctactggctgctcgccg 447 |||||||||||||||||||| Sbjct: 86631 gttctactggctgctcgccg 86612
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gttctactggctgctcgccg 447 |||||||||||||||||||| Sbjct: 25797 gttctactggctgctcgccg 25816
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 aggccggccgccccggcgccgacg 528 ||||||||||| |||||||||||| Sbjct: 740849 aggccggccgctccggcgccgacg 740826
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gggctcaccccgctccagcg 60 |||||||||||||||||||| Sbjct: 1219540 gggctcaccccgctccagcg 1219559 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,284,002 Number of Sequences: 3902068 Number of extensions: 3284002 Number of successful extensions: 70015 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 66401 Number of HSP's gapped (non-prelim): 3610 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
