ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9f20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483857.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
2dbj|AK067161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3dbj|AK061692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
5dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
6dbj|AP006848.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
7gb|AY109581.1| Zea mays CL32255_1 mRNA sequence 127 4e-26
8ref|NM_111321.2| Arabidopsis thaliana RNA binding / nucleic acid... 76 1e-10
9gb|BT005571.1| Arabidopsis thaliana clone U50875 putative RRM-co... 76 1e-10
10dbj|AK118315.1| Arabidopsis thaliana At3g04500 mRNA for unknown ... 76 1e-10
11gb|BT012859.1| Lycopersicon esculentum clone 113947R, mRNA sequence 56 1e-04
12gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC... 50 0.008
13emb|BX824315.1|CNS0A7R6 Arabidopsis thaliana Full-length cDNA Co... 50 0.008
14ref|XM_477174.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
15ref|XM_477173.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
17dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
18dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
19dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
20dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
21gb|AY677110.2| Didelphis virginiana homeobox A11 (HoxA-11) gene,... 44 0.48
22gb|AY523972.1|AY523972S1 Azospirillum brasilense plasmid 90 MDa,... 44 0.48
23emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 44 0.48
24emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 i... 44 0.48
25emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in... 44 0.48
26gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.9
27gb|AC131185.4| Mus musculus BAC clone RP23-402H1 from chromosome... 42 1.9
28gb|AC124556.4| Mus musculus BAC clone RP23-246K11 from chromosom... 42 1.9
29emb|CR456637.3| Platypus DNA sequence from clone XX-104A18, comp... 42 1.9
30emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 42 1.9
31dbj|AK172144.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.9
32gb|AC009182.4|AC009182 Drosophila melanogaster, chromosome 2R, r... 42 1.9
33gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 42 1.9
34gb|AC005267.1|AC005267 Drosophila melanogaster DNA sequence (P1s... 42 1.9
35gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 1.9
36gb|AC133174.5| Mus musculus BAC clone RP24-314N20 from 12, compl... 42 1.9
37gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, comple... 42 1.9
38gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, com... 40 7.5
39gb|BT023935.1| Drosophila melanogaster RE53092 full insert cDNA 40 7.5
40ref|NM_212808.1| Danio rerio zgc:85696 (zgc:85696), mRNA 40 7.5
41gb|AC141927.3| Mus musculus BAC clone RP23-237F16 from chromosom... 40 7.5
42gb|BC068361.1| Danio rerio zgc:85696, mRNA (cDNA clone MGC:85696... 40 7.5
43gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
44gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
45gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, comple... 40 7.5
46ref|XM_849898.1| PREDICTED: Canis familiaris similar to Absent i... 40 7.5
47ref|XM_795361.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 7.5
48gb|AY323128.1| Glycine max putative WRKY-type DNA binding protei... 40 7.5
49gb|BT000113.1| Arabidopsis thaliana unknown protein (At2g36120) ... 40 7.5
50emb|AL808019.6| Zebrafish DNA sequence from clone CH211-258D20 i... 40 7.5
51gb|AY136328.1| Arabidopsis thaliana unknown protein (At2g36120) ... 40 7.5
52gb|DQ078120.1| Rheum australe basic helix-loop-helix transcripti... 40 7.5
53gb|AC011905.4| Drosophila melanogaster 3L BAC RP98-27A3 (Roswell... 40 7.5
54gb|AE005997.1| Caulobacter crescentus CB15 section 323 of 359 of... 40 7.5
55ref|NM_139478.1| Drosophila melanogaster CG1143-RA (CG1143), mRNA 40 7.5
56gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cance... 40 7.5
57gb|AC007135.8| Arabidopsis thaliana chromosome 2 clone F9C22 map... 40 7.5
58ref|NM_136690.2| Drosophila melanogaster CG1513-RA (CG1513), mRNA 40 7.5
59ref|XM_689209.1| PREDICTED: Danio rerio similar to RNA binding m... 40 7.5
60gb|BC056604.1| Danio rerio zgc:85696, mRNA (cDNA clone MGC:65889... 40 7.5
61gb|AC161938.2| Mus musculus 6 BAC RP24-162E3 (Roswell Park Cance... 40 7.5
62dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
63gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Can... 40 7.5
64gb|AC007330.6|AC007330 Drosophila melanogaster, chromosome 2R, r... 40 7.5
65gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, r... 40 7.5
66gb|AC092850.13| Homo sapiens 12 BAC RP11-346B9 (Roswell Park Can... 40 7.5
67emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chro... 40 7.5
68gb|AF295432.1|AF295432 Penicillium janthinellum prepropenicillop... 40 7.5
69dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.5
70gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park C... 40 7.5
71dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.5
72dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
73ref|XM_312879.2| Anopheles gambiae str. PEST ENSANGP00000014812 ... 40 7.5
74gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19... 40 7.5
75gb|AE003475.4| Drosophila melanogaster chromosome 3L, section 9 ... 40 7.5
76gb|DQ273247.1| Lycopersicon hirsutum endogenous virus LycEPRV cl... 40 7.5
77dbj|AP006097.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.5 
>ref|XM_483857.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1163

 Score =  391 bits (197), Expect = e-105
 Identities = 322/363 (88%), Gaps = 3/363 (0%)
 Strand = Plus / Plus

                                                                       
Query: 194 cagtaccagcagctgcagcaagcacatcagctcttccagcgggacgctcagaccatcacc 253
           |||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||
Sbjct: 213 cagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacc 272

                                                                       
Query: 254 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgacccctct 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 273 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgcc 332

                                                                       
Query: 314 gctgccagggccaccgc---ctcctcctccgaccctgccgccaagaagaagacaatccct 370
             |||||| ||||||||   ||||||||||||||||||||||||||||||  | ||||| 
Sbjct: 333 aatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccc 392

                                                                       
Query: 371 cgtcgagcagccggacagtcctgggaggatcccaccctcaccgagtggcccgagaatgac 430
           || || || ||||| || |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 393 cgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccgacaatgac 452

                                                                       
Query: 431 tacaggttgttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagcc 490
           ||  | || ||||| |||||||| || || ||||| |||||||| || ||||||||||| 
Sbjct: 453 tatcgcttattttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagct 512

                                                                       
Query: 491 ttttcacggttcccctccttcaatatggcaaaggttgttagagataagaggactggcaaa 550
           ||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||
Sbjct: 513 ttttcacggttcccctccttcaacatggcaagggttgttcgagataagagaactggcaaa 572

              
Query: 551 aca 553
           |||
Sbjct: 573 aca 575
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>dbj|AK067161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H15, full
           insert sequence
          Length = 1018

 Score =  391 bits (197), Expect = e-105
 Identities = 322/363 (88%), Gaps = 3/363 (0%)
 Strand = Plus / Plus

                                                                       
Query: 194 cagtaccagcagctgcagcaagcacatcagctcttccagcgggacgctcagaccatcacc 253
           |||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||
Sbjct: 70  cagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacc 129

                                                                       
Query: 254 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgacccctct 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 130 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgcc 189

                                                                       
Query: 314 gctgccagggccaccgc---ctcctcctccgaccctgccgccaagaagaagacaatccct 370
             |||||| ||||||||   ||||||||||||||||||||||||||||||  | ||||| 
Sbjct: 190 aatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccc 249

                                                                       
Query: 371 cgtcgagcagccggacagtcctgggaggatcccaccctcaccgagtggcccgagaatgac 430
           || || || ||||| || |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 250 cgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccgacaatgac 309

                                                                       
Query: 431 tacaggttgttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagcc 490
           ||  | || ||||| |||||||| || || ||||| |||||||| || ||||||||||| 
Sbjct: 310 tatcgcttattttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagct 369

                                                                       
Query: 491 ttttcacggttcccctccttcaatatggcaaaggttgttagagataagaggactggcaaa 550
           ||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||
Sbjct: 370 ttttcacggttcccctccttcaacatggcaagggttgttcgagataagagaactggcaaa 429

              
Query: 551 aca 553
           |||
Sbjct: 430 aca 432
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>dbj|AK061692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C04, full
           insert sequence
          Length = 1163

 Score =  391 bits (197), Expect = e-105
 Identities = 322/363 (88%), Gaps = 3/363 (0%)
 Strand = Plus / Plus

                                                                       
Query: 194 cagtaccagcagctgcagcaagcacatcagctcttccagcgggacgctcagaccatcacc 253
           |||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||
Sbjct: 213 cagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacc 272

                                                                       
Query: 254 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgacccctct 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 273 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgcc 332

                                                                       
Query: 314 gctgccagggccaccgc---ctcctcctccgaccctgccgccaagaagaagacaatccct 370
             |||||| ||||||||   ||||||||||||||||||||||||||||||  | ||||| 
Sbjct: 333 aatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccc 392

                                                                       
Query: 371 cgtcgagcagccggacagtcctgggaggatcccaccctcaccgagtggcccgagaatgac 430
           || || || ||||| || |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 393 cgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccgacaatgac 452

                                                                       
Query: 431 tacaggttgttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagcc 490
           ||  | || ||||| |||||||| || || ||||| |||||||| || ||||||||||| 
Sbjct: 453 tatcgcttattttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagct 512

                                                                       
Query: 491 ttttcacggttcccctccttcaatatggcaaaggttgttagagataagaggactggcaaa 550
           ||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||
Sbjct: 513 ttttcacggttcccctccttcaacatggcaagggttgttcgagataagagaactggcaaa 572

              
Query: 551 aca 553
           |||
Sbjct: 573 aca 575
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  268 bits (135), Expect = 2e-68
 Identities = 209/233 (89%), Gaps = 3/233 (1%)
 Strand = Plus / Minus

                                                                            
Query: 194      cagtaccagcagctgcagcaagcacatcagctcttccagcgggacgctcagaccatcacc 253
                |||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||
Sbjct: 28401459 cagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacc 28401400

                                                                            
Query: 254      cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgacccctct 313
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 28401399 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgcc 28401340

                                                                            
Query: 314      gctgccagggccaccg---cctcctcctccgaccctgccgccaagaagaagacaatccct 370
                  |||||| |||||||   |||||||||||||||||||||||||||||||  | ||||| 
Sbjct: 28401339 aatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccc 28401280

                                                                     
Query: 371      cgtcgagcagccggacagtcctgggaggatcccaccctcaccgagtggcccga 423
                || || || ||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 28401279 cgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccga 28401227



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 440      ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 499
                ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 28401128 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 28401069

                                      
Query: 500      ttcccctccttcaatatggcaa 521
                |||||||||||||| |||||||
Sbjct: 28401068 ttcccctccttcaacatggcaa 28401047



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 522      aggttgttagagataagaggactggcaaaaca 553
                |||||||| |||||||||| ||||||||||||
Sbjct: 28400460 aggttgttcgagataagagaactggcaaaaca 28400429



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       cctaaccctcctcctcctcc 99
                ||||||||||||||||||||
Sbjct: 26153741 cctaaccctcctcctcctcc 26153760
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0044E16
          Length = 153296

 Score =  268 bits (135), Expect = 2e-68
 Identities = 209/233 (89%), Gaps = 3/233 (1%)
 Strand = Plus / Minus

                                                                          
Query: 194    cagtaccagcagctgcagcaagcacatcagctcttccagcgggacgctcagaccatcacc 253
              |||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||
Sbjct: 130265 cagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacc 130206

                                                                          
Query: 254    cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgacccctct 313
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 130205 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgcc 130146

                                                                          
Query: 314    gctgccagggccaccg---cctcctcctccgaccctgccgccaagaagaagacaatccct 370
                |||||| |||||||   |||||||||||||||||||||||||||||||  | ||||| 
Sbjct: 130145 aatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccc 130086

                                                                   
Query: 371    cgtcgagcagccggacagtcctgggaggatcccaccctcaccgagtggcccga 423
              || || || ||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 130085 cgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccga 130033



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                          
Query: 440    ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 499
              ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 129934 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 129875

                                    
Query: 500    ttcccctccttcaatatggcaa 521
              |||||||||||||| |||||||
Sbjct: 129874 ttcccctccttcaacatggcaa 129853



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 522    aggttgttagagataagaggactggcaaaaca 553
              |||||||| |||||||||| ||||||||||||
Sbjct: 129266 aggttgttcgagataagagaactggcaaaaca 129235
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>dbj|AP006848.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
            fosmid clone:OSJNOa199K18
          Length = 39582

 Score =  268 bits (135), Expect = 2e-68
 Identities = 209/233 (89%), Gaps = 3/233 (1%)
 Strand = Plus / Minus

                                                                        
Query: 194  cagtaccagcagctgcagcaagcacatcagctcttccagcgggacgctcagaccatcacc 253
            |||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||
Sbjct: 6261 cagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacc 6202

                                                                        
Query: 254  cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgacccctct 313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 6201 cccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgcc 6142

                                                                        
Query: 314  gctgccagggccaccg---cctcctcctccgaccctgccgccaagaagaagacaatccct 370
              |||||| |||||||   |||||||||||||||||||||||||||||||  | ||||| 
Sbjct: 6141 aatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccc 6082

                                                                 
Query: 371  cgtcgagcagccggacagtcctgggaggatcccaccctcaccgagtggcccga 423
            || || || ||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 6081 cgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccga 6029



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                        
Query: 440  ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 499
            ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 5930 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 5871

                                  
Query: 500  ttcccctccttcaatatggcaa 521
            |||||||||||||| |||||||
Sbjct: 5870 ttcccctccttcaacatggcaa 5849



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 522  aggttgttagagataagaggactggcaaaaca 553
            |||||||| |||||||||| ||||||||||||
Sbjct: 5262 aggttgttcgagataagagaactggcaaaaca 5231
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>gb|AY109581.1| Zea mays CL32255_1 mRNA sequence
          Length = 1255

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                       
Query: 446 ggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccc 505
           ||||||||||| |||||||||||||| |||||||| || ||||| || |||||||| || 
Sbjct: 740 ggagatctaggcaacgaagttaatgatgatgttctatccaaagcattctcacggtttcca 681

                                                       
Query: 506 tccttcaatatggcaaaggttgttagagataagaggactggcaa 549
           |||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 680 tccttcaacatggcaagggttgttagagataagaggactggcaa 637



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 203 cagctgcagcaagcacatcagctcttccagcgggacgctcagaccatcacccccgaggcg 262
           |||||||| || || ||||||||||||||||||||||| ||||||||||     ||||||
Sbjct: 980 cagctgcatcaggcgcatcagctcttccagcgggacgcgcagaccatcannnnngaggcg 921

                                                
Query: 263 ctcgagagcgtcaaggccgccctcgccaccagcgacg 299
           ||  ||||||||||||| || ||||||||||||||||
Sbjct: 920 ctgcagagcgtcaaggctgctctcgccaccagcgacg 884
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>ref|NM_111321.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G04500
           mRNA, complete cds
          Length = 1094

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 137/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 383 ggacagtcctgggaggatcccaccctcaccgagtggcccgagaatgactacaggttgttt 442
           |||||||| ||||||||||| || ||  | || ||||| || ||||||||  |  |||| 
Sbjct: 414 ggacagtcttgggaggatcctactctttcagaatggccagaaaatgactatcgtctgttc 473

                                                                       
Query: 443 tgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttc 502
           || || ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||
Sbjct: 474 tgtggtgatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattc 533

                                                             
Query: 503 ccctccttcaatatggcaaaggttgttagagataagaggactggcaaaac 552
           ||| ||||||||||||| |||||  ||||||||||| ||||||| |||||
Sbjct: 534 cccaccttcaatatggccaaggtcattagagataagcggactggtaaaac 583
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>gb|BT005571.1| Arabidopsis thaliana clone U50875 putative RRM-containing protein
           (At3g04500) mRNA, complete cds
          Length = 769

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 137/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 383 ggacagtcctgggaggatcccaccctcaccgagtggcccgagaatgactacaggttgttt 442
           |||||||| ||||||||||| || ||  | || ||||| || ||||||||  |  |||| 
Sbjct: 361 ggacagtcttgggaggatcctactctttcagaatggccagaaaatgactatcgtctgttc 420

                                                                       
Query: 443 tgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttc 502
           || || ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||
Sbjct: 421 tgtggtgatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattc 480

                                                             
Query: 503 ccctccttcaatatggcaaaggttgttagagataagaggactggcaaaac 552
           ||| ||||||||||||| |||||  ||||||||||| ||||||| |||||
Sbjct: 481 cccaccttcaatatggccaaggtcattagagataagcggactggtaaaac 530
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>dbj|AK118315.1| Arabidopsis thaliana At3g04500 mRNA for unknown protein, complete
           cds, clone: RAFL19-59-K02
          Length = 1095

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 137/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 383 ggacagtcctgggaggatcccaccctcaccgagtggcccgagaatgactacaggttgttt 442
           |||||||| ||||||||||| || ||  | || ||||| || ||||||||  |  |||| 
Sbjct: 414 ggacagtcttgggaggatcctactctttcagaatggccagaaaatgactatcgtctgttc 473

                                                                       
Query: 443 tgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttc 502
           || || ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||
Sbjct: 474 tgtggtgatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattc 533

                                                             
Query: 503 ccctccttcaatatggcaaaggttgttagagataagaggactggcaaaac 552
           ||| ||||||||||||| |||||  ||||||||||| ||||||| |||||
Sbjct: 534 cccaccttcaatatggccaaggtcattagagataagcggactggtaaaac 583
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>gb|BT012859.1| Lycopersicon esculentum clone 113947R, mRNA sequence
          Length = 1178

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 467 aatgacgatgttctctcaaaagccttttcacggttcccctccttcaatatggcaaaggtt 526
           ||||| ||||| || ||||||||||||||| |||| ||  | || |||||||| ||||||
Sbjct: 513 aatgatgatgtcctatcaaaagccttttcaaggtttccaacttttaatatggctaaggtt 572

                               
Query: 527 gttagagataagaggactgg 546
           || ||||| ||| |||||||
Sbjct: 573 gtaagagacaagcggactgg 592
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>gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC T27C4 genomic sequence,
             complete sequence
          Length = 71616

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                         
Query: 449   gatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccctcc 508
             ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||||| ||
Sbjct: 57745 gatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattccccacc 57686

                              
Query: 509   ttcaatatggcaaaggt 525
             ||||||||||| |||||
Sbjct: 57685 ttcaatatggccaaggt 57669
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>emb|BX824315.1|CNS0A7R6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH39ZE10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 943

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 109/137 (79%)
 Strand = Plus / Plus

                                                                       
Query: 383 ggacagtcctgggaggatcccaccctcaccgagtggcccgagaatgactacaggttgttt 442
           |||||||| ||||||||||| || ||  | || ||||| || ||||||||  |  |||| 
Sbjct: 321 ggacagtcttgggaggatcctactctttcagaatggccagaaaatgactatcgtctgttc 380

                                                                       
Query: 443 tgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttc 502
           || || ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||
Sbjct: 381 tgtggtgatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattc 440

                            
Query: 503 ccctccttcaatatggc 519
           ||| |||||||||||||
Sbjct: 441 cccaccttcaatatggc 457
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>ref|XM_477174.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2015

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 77 aaccctaaccctcctcctcctcc 99
          |||||||||||||||||||||||
Sbjct: 16 aaccctaaccctcctcctcctcc 38
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>ref|XM_477173.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 751

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 77 aaccctaaccctcctcctcctcc 99
          |||||||||||||||||||||||
Sbjct: 23 aaccctaaccctcctcctcctcc 45
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 77      aaccctaaccctcctcctcctcc 99
               |||||||||||||||||||||||
Sbjct: 7267331 aaccctaaccctcctcctcctcc 7267309
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>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0016A21
          Length = 144076

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 77     aaccctaaccctcctcctcctcc 99
              |||||||||||||||||||||||
Sbjct: 107815 aaccctaaccctcctcctcctcc 107793
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>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09,
          full insert sequence
          Length = 754

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 77 aaccctaaccctcctcctcctcc 99
          |||||||||||||||||||||||
Sbjct: 20 aaccctaaccctcctcctcctcc 42
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>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20,
          full insert sequence
          Length = 2015

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 77 aaccctaaccctcctcctcctcc 99
          |||||||||||||||||||||||
Sbjct: 16 aaccctaaccctcctcctcctcc 38
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>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10,
          full insert sequence
          Length = 751

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 77 aaccctaaccctcctcctcctcc 99
          |||||||||||||||||||||||
Sbjct: 23 aaccctaaccctcctcctcctcc 45
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>gb|AY677110.2| Didelphis virginiana homeobox A11 (HoxA-11) gene, partial cds
          Length = 735

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 ggccaccgcctcctcctccgac 343
           ||||||||||||||||||||||
Sbjct: 462 ggccaccgcctcctcctccgac 483
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>gb|AY523972.1|AY523972S1 Azospirillum brasilense plasmid 90 MDa, partial sequence
          Length = 24000

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 318   ccagggccaccgcctcctcctc 339
             ||||||||||||||||||||||
Sbjct: 14914 ccagggccaccgcctcctcctc 14935
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 245    accatcacccccgaggcgctcg 266
              ||||||||||||||||||||||
Sbjct: 243200 accatcacccccgaggcgctcg 243221
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>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14,
             complete sequence
          Length = 160419

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 330   cctcctcctccgaccctgccgccaag 355
             ||||||||||| ||||||||||||||
Sbjct: 60811 cctcctcctcccaccctgccgccaag 60786
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>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14,
             complete sequence
          Length = 195499

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 330   cctcctcctccgaccctgccgccaag 355
             ||||||||||| ||||||||||||||
Sbjct: 41809 cctcctcctcccaccctgccgccaag 41784
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 255    ccgaggcgctcgagagcgtca 275
              |||||||||||||||||||||
Sbjct: 508864 ccgaggcgctcgagagcgtca 508884



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    gcgtcaaggccgccctcgcc 289
              ||||||||||||||||||||
Sbjct: 920117 gcgtcaaggccgccctcgcc 920136
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>gb|AC131185.4| Mus musculus BAC clone RP23-402H1 from chromosome 19, complete sequence
          Length = 208584

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   gccaccgcctcctcctccgac 343
             |||||||||||||||||||||
Sbjct: 70121 gccaccgcctcctcctccgac 70141
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>gb|AC124556.4| Mus musculus BAC clone RP23-246K11 from chromosome 12, complete
             sequence
          Length = 202214

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 387   agtcctgggaggatcccaccc 407
             |||||||||||||||||||||
Sbjct: 24956 agtcctgggaggatcccaccc 24976
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>emb|CR456637.3| Platypus DNA sequence from clone XX-104A18, complete sequence
          Length = 110477

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    cctcctcctcctcccggttct 106
             |||||||||||||||||||||
Sbjct: 65557 cctcctcctcctcccggttct 65577
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 277     ggccgccctcgccaccagcgacgtcctcg 305
               ||||||||||| ||||||||||| |||||
Sbjct: 1389733 ggccgccctcggcaccagcgacgccctcg 1389705
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>dbj|AK172144.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830047L18 product:meningioma expressed
           antigen 5 (hyaluronidase), full insert sequence
          Length = 2321

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 323 gccaccgcctcctcctccgac 343
           |||||||||||||||||||||
Sbjct: 388 gccaccgcctcctcctccgac 368
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>gb|AC009182.4|AC009182 Drosophila melanogaster, chromosome 2R, region 60A2-60A3, BAC clone
              BACR05F24, complete sequence
          Length = 147086

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     accctaaccctcctcctcctc 98
              |||||||||||||||||||||
Sbjct: 111531 accctaaccctcctcctcctc 111511
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     accctaaccctcctcctcctc 98
              |||||||||||||||||||||
Sbjct: 408016 accctaaccctcctcctcctc 407996
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>gb|AC005267.1|AC005267 Drosophila melanogaster DNA sequence (P1s DS03050 (D194) and DS06185
             (D246)), complete sequence
          Length = 98645

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    accctaaccctcctcctcctc 98
             |||||||||||||||||||||
Sbjct: 40215 accctaaccctcctcctcctc 40195
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    gccagggccaccgcctcctcc 337
              |||||||||||||||||||||
Sbjct: 164120 gccagggccaccgcctcctcc 164140



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 318     ccagggccaccgcctcctcc 337
               ||||||||||||||||||||
Sbjct: 1169140 ccagggccaccgcctcctcc 1169159
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>gb|AC133174.5| Mus musculus BAC clone RP24-314N20 from 12, complete sequence
          Length = 208222

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 387    agtcctgggaggatcccaccc 407
              |||||||||||||||||||||
Sbjct: 206221 agtcctgggaggatcccaccc 206241
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>gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, complete sequence
          Length = 185283

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    gccaccgcctcctcctccgac 343
              |||||||||||||||||||||
Sbjct: 156798 gccaccgcctcctcctccgac 156818
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>gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, complete sequence
          Length = 187158

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 320   agggccaccgcctcctcctccgac 343
             |||||| |||||||||||||||||
Sbjct: 58309 agggcctccgcctcctcctccgac 58332
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>gb|BT023935.1| Drosophila melanogaster RE53092 full insert cDNA
          Length = 1081

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 gccagggccaccgcctcctc 336
           ||||||||||||||||||||
Sbjct: 712 gccagggccaccgcctcctc 693
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>ref|NM_212808.1| Danio rerio zgc:85696 (zgc:85696), mRNA
          Length = 3102

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cagtaccagcagctgcagca 213
            ||||||||||||||||||||
Sbjct: 1425 cagtaccagcagctgcagca 1444
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>gb|AC141927.3| Mus musculus BAC clone RP23-237F16 from chromosome 6, complete sequence
          Length = 186452

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   accagtaccagcagctgcag 211
             ||||||||||||||||||||
Sbjct: 81109 accagtaccagcagctgcag 81090
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>gb|BC068361.1| Danio rerio zgc:85696, mRNA (cDNA clone MGC:85696 IMAGE:6962366),
            complete cds
          Length = 3102

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cagtaccagcagctgcagca 213
            ||||||||||||||||||||
Sbjct: 1425 cagtaccagcagctgcagca 1444
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>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
            complete sequence
          Length = 94286

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 519  caaaggttgttagagataag 538
            ||||||||||||||||||||
Sbjct: 9221 caaaggttgttagagataag 9240
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>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0016G07, complete sequence
          Length = 123167

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   caaaggttgttagagataag 538
             ||||||||||||||||||||
Sbjct: 76122 caaaggttgttagagataag 76141
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>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence
          Length = 182686

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    tctctcaaaagccttttcac 497
              ||||||||||||||||||||
Sbjct: 156225 tctctcaaaagccttttcac 156206
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>ref|XM_849898.1| PREDICTED: Canis familiaris similar to Absent in melanoma 1 protein
           (LOC612166), mRNA
          Length = 2784

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 gccagggccaccgcctcctcctcc 340
           |||||||||||| |||||||||||
Sbjct: 44  gccagggccacctcctcctcctcc 21
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>ref|XM_795361.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC587415 (LOC587415), partial mRNA
          Length = 298

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  cctaaccctcctcctcctcc 99
           ||||||||||||||||||||
Sbjct: 248 cctaaccctcctcctcctcc 229
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>gb|AY323128.1| Glycine max putative WRKY-type DNA binding protein (WRKY1) mRNA,
            complete cds
          Length = 2226

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cagtaccagcagctgcagca 213
            ||||||||||||||||||||
Sbjct: 1609 cagtaccagcagctgcagca 1628
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>gb|BT000113.1| Arabidopsis thaliana unknown protein (At2g36120) mRNA, complete cds
          Length = 913

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 ccagggccaccgcctcctcctccg 341
           ||||||||||| ||||||||||||
Sbjct: 302 ccagggccaccacctcctcctccg 279
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>emb|AL808019.6| Zebrafish DNA sequence from clone CH211-258D20 in linkage group 7
              Contains a gene for a novel actinin and four CpG islands,
              complete sequence
          Length = 159698

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    cagtaccagcagctgcagca 213
              ||||||||||||||||||||
Sbjct: 153644 cagtaccagcagctgcagca 153625
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>gb|AY136328.1| Arabidopsis thaliana unknown protein (At2g36120) mRNA, complete cds
          Length = 1030

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 ccagggccaccgcctcctcctccg 341
           ||||||||||| ||||||||||||
Sbjct: 333 ccagggccaccacctcctcctccg 310
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>gb|DQ078120.1| Rheum australe basic helix-loop-helix transcription factor protein
            mRNA, complete cds
          Length = 2522

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 329  gcctcctcctccgaccctgccgcc 352
            ||||||||||||| ||||||||||
Sbjct: 1071 gcctcctcctccgcccctgccgcc 1094
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>gb|AC011905.4| Drosophila melanogaster 3L BAC RP98-27A3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 192681

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    gccagggccaccgcctcctc 336
              ||||||||||||||||||||
Sbjct: 184991 gccagggccaccgcctcctc 184972
to top
>gb|AE005997.1| Caulobacter crescentus CB15 section 323 of 359 of the complete
           genome
          Length = 11386

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tcgagagcgtcaaggccgcc 283
           ||||||||||||||||||||
Sbjct: 298 tcgagagcgtcaaggccgcc 279
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>ref|NM_139478.1| Drosophila melanogaster CG1143-RA (CG1143), mRNA
          Length = 959

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 gccagggccaccgcctcctc 336
           ||||||||||||||||||||
Sbjct: 712 gccagggccaccgcctcctc 693
to top
>gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208610

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 478    tctctcaaaagccttttcac 497
              ||||||||||||||||||||
Sbjct: 185146 tctctcaaaagccttttcac 185165
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>gb|AC007135.8| Arabidopsis thaliana chromosome 2 clone F9C22 map g6825, complete
             sequence
          Length = 31733

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   ccagggccaccgcctcctcctccg 341
             ||||||||||| ||||||||||||
Sbjct: 16163 ccagggccaccacctcctcctccg 16140
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>ref|NM_136690.2| Drosophila melanogaster CG1513-RA (CG1513), mRNA
          Length = 2616

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 ggccaccgcctcctcctccg 341
           ||||||||||||||||||||
Sbjct: 255 ggccaccgcctcctcctccg 236
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>ref|XM_689209.1| PREDICTED: Danio rerio similar to RNA binding motif protein 14
            (LOC573510), mRNA
          Length = 1383

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cagtaccagcagctgcagca 213
            ||||||||||||||||||||
Sbjct: 1093 cagtaccagcagctgcagca 1112
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>gb|BC056604.1| Danio rerio zgc:85696, mRNA (cDNA clone MGC:65889 IMAGE:6801267),
            complete cds
          Length = 3047

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cagtaccagcagctgcagca 213
            ||||||||||||||||||||
Sbjct: 1396 cagtaccagcagctgcagca 1415
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>gb|AC161938.2| Mus musculus 6 BAC RP24-162E3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 163330

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   accagtaccagcagctgcag 211
             ||||||||||||||||||||
Sbjct: 35662 accagtaccagcagctgcag 35681
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 519     caaaggttgttagagataag 538
               ||||||||||||||||||||
Sbjct: 6704960 caaaggttgttagagataag 6704979
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>gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180995

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 317    gccagggccaccgcctcctcctcc 340
              |||||||||||| |||||||||||
Sbjct: 124335 gccagggccacctcctcctcctcc 124358
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>gb|AC007330.6|AC007330 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
              BACR30G11, complete sequence
          Length = 166854

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    ggccaccgcctcctcctccg 341
              ||||||||||||||||||||
Sbjct: 102632 ggccaccgcctcctcctccg 102651
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>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
             BACR01L01, complete sequence
          Length = 160301

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   ggccaccgcctcctcctccg 341
             ||||||||||||||||||||
Sbjct: 57714 ggccaccgcctcctcctccg 57733
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>gb|AC092850.13| Homo sapiens 12 BAC RP11-346B9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176733

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 317    gccagggccaccgcctcctcctcc 340
              |||||||||||| |||||||||||
Sbjct: 118793 gccagggccacctcctcctcctcc 118816
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>emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chromosome 2, complete
             sequence
          Length = 163057

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 85    ccctcctcctcctcccggttcttc 108
             |||||||||||||||| |||||||
Sbjct: 71645 ccctcctcctcctcccagttcttc 71622
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>gb|AF295432.1|AF295432 Penicillium janthinellum prepropenicillopepsin-JT3 (pepB) gene,
           complete cds
          Length = 2170

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 193 ccagtaccagcagctgcagcaagcacat 220
           |||||| ||||||| |||||||||||||
Sbjct: 793 ccagtagcagcagcagcagcaagcacat 766
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    caccagcgacgtcctcgacc 308
              ||||||||||||||||||||
Sbjct: 888190 caccagcgacgtcctcgacc 888171
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>gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188527

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    agcaagcacatcagctcttc 229
              ||||||||||||||||||||
Sbjct: 104133 agcaagcacatcagctcttc 104152
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 393    gggaggatcccaccctcacc 412
              ||||||||||||||||||||
Sbjct: 787861 gggaggatcccaccctcacc 787842
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    cctaaccctcctcctcctcc 99
             ||||||||||||||||||||
Sbjct: 97672 cctaaccctcctcctcctcc 97691
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>ref|XM_312879.2| Anopheles gambiae str. PEST ENSANGP00000014812
           (ENSANGG00000012323), partial mRNA
          Length = 689

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 366 tccctcgtcgagcagccggacagt 389
           |||| |||||||||||||||||||
Sbjct: 266 tcccgcgtcgagcagccggacagt 243
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>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete
             sequence
          Length = 275390

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   ggccaccgcctcctcctccg 341
             ||||||||||||||||||||
Sbjct: 43560 ggccaccgcctcctcctccg 43579
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>gb|AE003475.4| Drosophila melanogaster chromosome 3L, section 9 of 83 of the complete
              sequence
          Length = 301691

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    gccagggccaccgcctcctc 336
              ||||||||||||||||||||
Sbjct: 181363 gccagggccaccgcctcctc 181344
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>gb|DQ273247.1| Lycopersicon hirsutum endogenous virus LycEPRV clone IGRcLh_7
           putative transactivator protein mRNA, partial cds
          Length = 799

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcagctgcagcaagcacatc 221
           ||||||||||||||||||||
Sbjct: 103 gcagctgcagcaagcacatc 122
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>dbj|AP006097.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45O19, TM0174,
             complete sequence
          Length = 75668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    cctaaccctcctcctcctcc 99
             ||||||||||||||||||||
Sbjct: 68573 cctaaccctcctcctcctcc 68592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,454,402
Number of Sequences: 3902068
Number of extensions: 5454402
Number of successful extensions: 433490
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 432216
Number of HSP's gapped (non-prelim): 1264
length of query: 553
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 530
effective length of database: 17,143,297,704
effective search space: 9085947783120
effective search space used: 9085947783120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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