Clone Name | bags9d11 |
---|---|
Clone Library Name | barley_pub |
>CAS1_ARATH (P38605) Cycloartenol synthase (EC 5.4.99.8)| (2,3-epoxysqualene--cycloartenol cyclase) Length = 759 Score = 171 bits (433), Expect(2) = 2e-54 Identities = 77/154 (50%), Positives = 112/154 (72%) Frame = +2 Query: 194 RFEKRESQDLLMRMQYAKLNPLPAIVPKVHLDDNAEVTEEIISASLRQALNQYCTLQAHD 373 RF ++ S DLLMR+Q+++ N + ++P+V ++D +VTEE++ +L++ L+ Y T+QAHD Sbjct: 52 RFVQKHSADLLMRLQFSRENLISPVLPQVKIEDTDDVTEEMVETTLKRGLDFYSTIQAHD 111 Query: 374 GHWPGDNSGIMFLMPMFIFSLYVTENLHSVISSDHQREICRHIYNHQNEDGGWGTHVIGP 553 GHWPGD G MFL+P I +L +T L++V+S H++E+ R++YNHQNEDGGWG H+ GP Sbjct: 112 GHWPGDYGGPMFLLPGLIITLSITGALNTVLSEQHKQEMRRYLYNHQNEDGGWGLHIEGP 171 Query: 554 SNMLCSCLNYAALRLLGEMLDCDNGALAKGRAWI 655 S M S LNY LRLLGE + +G + KGR WI Sbjct: 172 STMFGSVLNYVTLRLLGEGPNDGDGDMEKGRDWI 205 Score = 61.2 bits (147), Expect(2) = 2e-54 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +1 Query: 40 MWRLKVSEGGSPWLRSPSSFLGRAVWEFDPELGTP 144 MW+LK++EGGSPWLR+ ++ +GR WEFDP LGTP Sbjct: 1 MWKLKIAEGGSPWLRTTNNHVGRQFWEFDPNLGTP 35
>ERG7_PNECA (Q96WJ0) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 719 Score = 74.7 bits (182), Expect = 2e-13 Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%) Frame = +2 Query: 326 SLRQALNQYCTLQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSVISSDHQR-EICRHI 502 S R+ + Y LQ DG+W + G+MFL+P I ++Y+++ + D R E+ R++ Sbjct: 70 SARKGFSFYKHLQTSDGNWACEYGGVMFLLPGLIIAMYISK----IEFPDEMRIEVIRYL 125 Query: 503 YNHQN-EDGGWGTHVIGPSNMLCSCLNYAALRLLG 604 NH N EDGGWG H+ G S + + LNY LR+LG Sbjct: 126 VNHANPEDGGWGIHIEGKSTVFGTALNYVVLRILG 160 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +2 Query: 317 ISASLRQALNQYCTLQAHDGHWPGDNSGIMFLMPMFIF-SLYVTENLHSVISSDHQREIC 493 I+ S++ A+ Q DG W + MF SL ++ + +S H R C Sbjct: 551 INKSVKNAIQFIKESQRPDGSWYESWAICFTYATMFALESLSCVKDFYE--NSFHSRRAC 608 Query: 494 RHIYNHQNEDGGW 532 + N Q EDGGW Sbjct: 609 DFLVNKQEEDGGW 621
>ERG7_MOUSE (Q8BLN5) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 733 Score = 73.2 bits (178), Expect = 6e-13 Identities = 33/85 (38%), Positives = 52/85 (61%) Frame = +2 Query: 350 YCTLQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSVISSDHQREICRHIYNHQNEDGG 529 Y LQA DGHW GD G +FL+P + + +++ H + + ++ E+ R++ + Q DGG Sbjct: 85 YAKLQAEDGHWAGDYGGPLFLLPGLLITCHIS---HISLPAGYREEMVRYLRSVQLPDGG 141 Query: 530 WGTHVIGPSNMLCSCLNYAALRLLG 604 WG H+ S + + LNY ALR+LG Sbjct: 142 WGLHIEDKSTVFGTALNYVALRILG 166
>ERG7_RAT (P48450) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 733 Score = 69.7 bits (169), Expect = 7e-12 Identities = 31/85 (36%), Positives = 51/85 (60%) Frame = +2 Query: 350 YCTLQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSVISSDHQREICRHIYNHQNEDGG 529 Y LQA DGHW GD G +FL+P + + ++ H + + ++ E+ R++ + Q DGG Sbjct: 85 YAKLQAEDGHWAGDYGGPLFLLPGLLITCHIA---HIPLPAGYREEMVRYLRSVQLPDGG 141 Query: 530 WGTHVIGPSNMLCSCLNYAALRLLG 604 WG H+ S + + L+Y +LR+LG Sbjct: 142 WGLHIEDKSTVFGTALSYVSLRILG 166
>ERG7_HUMAN (P48449) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 732 Score = 69.3 bits (168), Expect = 9e-12 Identities = 33/85 (38%), Positives = 50/85 (58%) Frame = +2 Query: 350 YCTLQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSVISSDHQREICRHIYNHQNEDGG 529 Y LQA DGHW GD G +FL+P + + +V + + ++ EI R++ + Q DGG Sbjct: 84 YVGLQAEDGHWTGDYGGPLFLLPGLLITCHVAR---IPLPAGYREEIVRYLRSVQLPDGG 140 Query: 530 WGTHVIGPSNMLCSCLNYAALRLLG 604 WG H+ S + + LNY +LR+LG Sbjct: 141 WGLHIEDKSTVFGTALNYVSLRILG 165
>ERG7_SCHPO (Q10231) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 721 Score = 65.9 bits (159), Expect = 1e-10 Identities = 31/82 (37%), Positives = 46/82 (56%) Frame = +2 Query: 359 LQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSVISSDHQREICRHIYNHQNEDGGWGT 538 LQ DGHW G MFL+ +F+ Y+++ + EI +++ NH N+DGGWG Sbjct: 84 LQLPDGHWASPYEGPMFLICGAVFAFYISQ---TPFPKGWAPEIIQYLINHTNDDGGWGI 140 Query: 539 HVIGPSNMLCSCLNYAALRLLG 604 H G S + + +NY LR+LG Sbjct: 141 HTEGVSTVFGTSMNYVVLRILG 162
>ERG7_CANAL (Q04782) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 728 Score = 50.8 bits (120), Expect = 3e-06 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 3/99 (3%) Frame = +2 Query: 359 LQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSV--ISSDHQREICRHIYNHQNE-DGG 529 LQ +G +P G PMF+ YVT N +S I ++ E+ R+I N + DGG Sbjct: 80 LQLDNGIFPCQYKG-----PMFMTIGYVTANYYSKTEIPEPYRVEMIRYIVNTAHPVDGG 134 Query: 530 WGTHVIGPSNMLCSCLNYAALRLLGEMLDCDNGALAKGR 646 WG H + S + +NY LRLLG ++ D+ L K R Sbjct: 135 WGLHSVDKSTCFGTTMNYVCLRLLG--MEKDHPVLVKAR 171
>ERG7_YEAST (P38604) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 730 Score = 47.4 bits (111), Expect = 4e-05 Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 3/81 (3%) Frame = +2 Query: 416 PMFIFSLYVTENLHSVIS-SDHQR-EICRHIYNHQNE-DGGWGTHVIGPSNMLCSCLNYA 586 PMF+ YV N + I +H+R E+ R+I N + DGGWG H + S + + LNY Sbjct: 101 PMFMTIGYVAVNYIAGIEIPEHERIELIRYIVNTAHPVDGGWGLHSVDKSTVFGTVLNYV 160 Query: 587 ALRLLGEMLDCDNGALAKGRA 649 LRLLG L D+ AK R+ Sbjct: 161 ILRLLG--LPKDHPVCAKARS 179 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Frame = +2 Query: 308 EEIISASLRQALNQYCTLQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSV----ISSD 475 +E I +R A+ Q DG W G + GI F ++ E LH+V +S Sbjct: 558 KEEIRTRIRIAIEFIKKSQLPDGSWYG-SWGICFTYA----GMFALEALHTVGETYENSS 612 Query: 476 HQREICRHIYNHQNEDGGWG 535 R+ C + + Q +DGGWG Sbjct: 613 TVRKGCDFLVSKQMKDGGWG 632
>SQHC_ALIAC (P33247) Squalene--hopene cyclase (EC 5.4.99.17)| Length = 630 Score = 38.5 bits (88), Expect = 0.018 Identities = 21/97 (21%), Positives = 45/97 (46%) Frame = +2 Query: 326 SLRQALNQYCTLQAHDGHWPGDNSGIMFLMPMFIFSLYVTENLHSVISSDHQREICRHIY 505 +L +A+ + Q +G+W G + + ++ ++ + + D +I R++ Sbjct: 13 TLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDR----VDRDRMEKIRRYLL 68 Query: 506 NHQNEDGGWGTHVIGPSNMLCSCLNYAALRLLGEMLD 616 + Q EDG W + GP ++ + Y AL+ +G D Sbjct: 69 HEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRD 105
>Y984_THEMA (Q9X079) Hypothetical UPF0192 protein TM0984 precursor| Length = 1536 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +2 Query: 446 ENLHSVISSDHQREICRHIYNHQNEDGGWGTHVIGPSNMLCSC 574 ENL +I QR + + +Y++Q+ DGGWG G S+ +C Sbjct: 941 ENLEEII----QRGLFK-LYSYQHNDGGWGWFRFGESDDFMTC 978
>Y1503_PASMU (Q9CKV2) Hypothetical protein PM1503| Length = 289 Score = 29.6 bits (65), Expect = 8.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +3 Query: 9 LLPPYAGHLXXVEAEGVGGRQPVAAFPE 92 +L PYA HL V AE G P+A FP+ Sbjct: 1 MLTPYAYHLVNVFAETYFGGNPLAVFPQ 28
>ASPX_VULVU (P53353) Sperm acrosomal protein FSA-ACR.1 precursor (Fragment)| Length = 349 Score = 29.6 bits (65), Expect = 8.2 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -3 Query: 197 NGTACSLGATSQPLRXXXXXXXXXSNSHTALPRKLLGERSHGLPPSDTFS 48 +G S+ S ++S A K LGE+ G+PPS TFS Sbjct: 219 SGEQASIEKASSEQASAEQASAEQASSEQASGEKPLGEQPSGIPPSSTFS 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,048,847 Number of Sequences: 219361 Number of extensions: 2145588 Number of successful extensions: 5143 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4932 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5133 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)