Clone Name | bags9f01 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_188250.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 392 bits (198), Expect = e-106 Identities = 284/312 (91%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 1 aggggcatctgatccccaaggnn-ggtgcgtgttcatgtacttccggtcggtccacctcg 59 ||||||| || |||||||||| |||||||||| ||||||||||||| |||||||||| Sbjct: 1145 aggggcacctcatccccaaggggtggtgcgtgtttgtgtacttccggtcagtccacctcg 1204 Query: 60 acgacatgctctacgaggatccctgcaagttcaatccatggaggtggaaggagaaggacg 119 | || | ||||||||| || |||| ||||||||| |||||||||||||||||||||||| Sbjct: 1205 atgatacgctctacgatgagccctacaagttcaacccatggaggtggaaggagaaggaca 1264 Query: 120 tgagcgctagcagcttcaccccttttggtggtgggcagaggctgtgcccgggcctggatc 179 ||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1265 tgagcaatggcagcttcactccttttggtggtgggcagaggctgtgcccaggcctggatc 1324 Query: 180 tggccaggctggaagcttccatctttctccaccacttggtcaccagcttcagttgggtgg 239 ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 1325 tggccaggctggaagcttccatcttccttcaccacttggtcaccagcttcaggtgggtgg 1384 Query: 240 ccgaggaggaccacatcgtcaacttccccaccgtgcgcctcaagggaggcatgcccatca 299 | ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 1385 cggaggaggaccacatcgtcaacttccccaccgtgcggctcaagcggggcatgcccatca 1444 Query: 300 gggtcaccgcca 311 |||||||||||| Sbjct: 1445 gggtcaccgcca 1456
>gb|AY108747.1| Zea mays PCO149427 mRNA sequence Length = 500 Score = 260 bits (131), Expect = 3e-66 Identities = 176/191 (92%) Strand = Plus / Plus Query: 132 gcttcaccccttttggtggtgggcagaggctgtgcccgggcctggatctggccaggctgg 191 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 24 gcttcaccccttttggcggtgggcagaggctgtgcccaggcctggatctggccaggctgg 83 Query: 192 aagcttccatctttctccaccacttggtcaccagcttcagttgggtggccgaggaggacc 251 ||||||||||||||||||| ||| |||| ||||||||||| |||||||| |||||||||| Sbjct: 84 aagcttccatctttctccatcacctggtgaccagcttcaggtgggtggcggaggaggacc 143 Query: 252 acatcgtcaacttccccaccgtgcgcctcaagggaggcatgcccatcagggtcaccgcca 311 |||||||||||||||| |||||||| |||||| ||||||||||| ||||| ||||| || Sbjct: 144 acatcgtcaacttcccaaccgtgcggctcaagcgaggcatgcccgtcaggctcaccagca 203 Query: 312 gagactagcta 322 |||||||||| Sbjct: 204 aagactagcta 214
>dbj|AK101929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072F08, full insert sequence Length = 2717 Score = 232 bits (117), Expect = 8e-58 Identities = 168/185 (90%) Strand = Plus / Plus Query: 47 tcggtccacctcgacgacatgctctacgaggatccctgcaagttcaatccatggaggtgg 106 |||||||||||||| || ||||||||||| || |||| ||||||||| ||||| |||| | Sbjct: 1835 tcggtccacctcgatgatatgctctacgatgagccctacaagttcaacccatgaaggtcg 1894 Query: 107 aaggagaaggacgtgagcgctagcagcttcaccccttttggtggtgggcagaggctgtgc 166 |||||||||||| ||||| | |||||||||| || |||||||||||||||||||||||| Sbjct: 1895 aaggagaaggacatgagcaatggcagcttcactccatttggtggtgggcagaggctgtgc 1954 Query: 167 ccgggcctggatctggccaggctggaagcttccatctttctccaccacttggtcaccagc 226 || |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1955 ccaggcctggatctggccaggctggaagcttccatcttttttcaccacttggtcaccagc 2014 Query: 227 ttcag 231 ||||| Sbjct: 2015 ttcag 2019
>dbj|AK073763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G07, full insert sequence Length = 3775 Score = 232 bits (117), Expect = 8e-58 Identities = 168/185 (90%) Strand = Plus / Plus Query: 47 tcggtccacctcgacgacatgctctacgaggatccctgcaagttcaatccatggaggtgg 106 |||||||||||||| || ||||||||||| || |||| ||||||||| ||||| |||| | Sbjct: 1780 tcggtccacctcgatgatatgctctacgatgagccctacaagttcaacccatgaaggtcg 1839 Query: 107 aaggagaaggacgtgagcgctagcagcttcaccccttttggtggtgggcagaggctgtgc 166 |||||||||||| ||||| | |||||||||| || |||||||||||||||||||||||| Sbjct: 1840 aaggagaaggacatgagcaatggcagcttcactccatttggtggtgggcagaggctgtgc 1899 Query: 167 ccgggcctggatctggccaggctggaagcttccatctttctccaccacttggtcaccagc 226 || |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1900 ccaggcctggatctggccaggctggaagcttccatcttttttcaccacttggtcaccagc 1959 Query: 227 ttcag 231 ||||| Sbjct: 1960 ttcag 1964
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 182 bits (92), Expect = 6e-43 Identities = 116/124 (93%) Strand = Plus / Plus Query: 108 aggagaaggacgtgagcgctagcagcttcaccccttttggtggtgggcagaggctgtgcc 167 ||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct: 5239475 aggagaaggacatgagcaatggcagcttcactccttttggtggtgggcagaggctgtgcc 5239534 Query: 168 cgggcctggatctggccaggctggaagcttccatctttctccaccacttggtcaccagct 227 | ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 5239535 caggcctggatctggccaggctggaagcttccatcttccttcaccacttggtcaccagct 5239594 Query: 228 tcag 231 |||| Sbjct: 5239595 tcag 5239598 Score = 125 bits (63), Expect = 1e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 233 tgggtggccgaggaggaccacatcgtcaacttccccaccgtgcgcctcaagggaggcatg 292 |||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| Sbjct: 5242916 tgggtggcggaggaggaccacatcgtcaacttccccaccgtgcggctcaagcggggcatg 5242975 Query: 293 cccatcagggtcaccgcca 311 ||||||||||||||||||| Sbjct: 5242976 cccatcagggtcaccgcca 5242994 Score = 97.6 bits (49), Expect = 3e-17 Identities = 96/111 (86%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 1 aggggcatctgatccccaaggnn-ggtgcgtgttcatgtacttccggtcggtccacctcg 59 ||||||| || |||||||||| |||||||||| ||||||||||||| |||||||||| Sbjct: 5238857 aggggcacctcatccccaaggggtggtgcgtgtttgtgtacttccggtcagtccacctcg 5238916 Query: 60 acgacatgctctacgaggatccctgcaagttcaatccatggaggtggaagg 110 | || | ||||||||| || |||| ||||||||| |||||||||||||||| Sbjct: 5238917 atgatacgctctacgatgagccctacaagttcaacccatggaggtggaagg 5238967
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 182 bits (92), Expect = 6e-43 Identities = 116/124 (93%) Strand = Plus / Plus Query: 108 aggagaaggacgtgagcgctagcagcttcaccccttttggtggtgggcagaggctgtgcc 167 ||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct: 34726 aggagaaggacatgagcaatggcagcttcactccttttggtggtgggcagaggctgtgcc 34785 Query: 168 cgggcctggatctggccaggctggaagcttccatctttctccaccacttggtcaccagct 227 | ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 34786 caggcctggatctggccaggctggaagcttccatcttccttcaccacttggtcaccagct 34845 Query: 228 tcag 231 |||| Sbjct: 34846 tcag 34849 Score = 125 bits (63), Expect = 1e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 233 tgggtggccgaggaggaccacatcgtcaacttccccaccgtgcgcctcaagggaggcatg 292 |||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| Sbjct: 38167 tgggtggcggaggaggaccacatcgtcaacttccccaccgtgcggctcaagcggggcatg 38226 Query: 293 cccatcagggtcaccgcca 311 ||||||||||||||||||| Sbjct: 38227 cccatcagggtcaccgcca 38245 Score = 97.6 bits (49), Expect = 3e-17 Identities = 96/111 (86%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 1 aggggcatctgatccccaaggnn-ggtgcgtgttcatgtacttccggtcggtccacctcg 59 ||||||| || |||||||||| |||||||||| ||||||||||||| |||||||||| Sbjct: 34108 aggggcacctcatccccaaggggtggtgcgtgtttgtgtacttccggtcagtccacctcg 34167 Query: 60 acgacatgctctacgaggatccctgcaagttcaatccatggaggtggaagg 110 | || | ||||||||| || |||| ||||||||| |||||||||||||||| Sbjct: 34168 atgatacgctctacgatgagccctacaagttcaacccatggaggtggaagg 34218
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 174 bits (88), Expect = 2e-40 Identities = 115/124 (92%) Strand = Plus / Plus Query: 108 aggagaaggacgtgagcgctagcagcttcaccccttttggtggtgggcagaggctgtgcc 167 ||||||||||| ||||| | |||||||||| || ||||||||||||||||||||||||| Sbjct: 1986470 aggagaaggacatgagcaatggcagcttcactccatttggtggtgggcagaggctgtgcc 1986529 Query: 168 cgggcctggatctggccaggctggaagcttccatctttctccaccacttggtcaccagct 227 | |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 1986530 caggcctggatctggccaggctggaagcttccatcttttttcaccacttggtcaccagct 1986589 Query: 228 tcag 231 |||| Sbjct: 1986590 tcag 1986593 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 47 tcggtccacctcgacgacatgctctacgaggatccctgcaagttcaatccatggaggtgg 106 |||||||||||||| || ||||||||||| || |||| ||||||||| ||||| |||| | Sbjct: 1985906 tcggtccacctcgatgatatgctctacgatgagccctacaagttcaacccatgaaggtcg 1985965 Query: 107 aagg 110 |||| Sbjct: 1985966 aagg 1985969
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 174 bits (88), Expect = 2e-40 Identities = 115/124 (92%) Strand = Plus / Plus Query: 108 aggagaaggacgtgagcgctagcagcttcaccccttttggtggtgggcagaggctgtgcc 167 ||||||||||| ||||| | |||||||||| || ||||||||||||||||||||||||| Sbjct: 70767 aggagaaggacatgagcaatggcagcttcactccatttggtggtgggcagaggctgtgcc 70826 Query: 168 cgggcctggatctggccaggctggaagcttccatctttctccaccacttggtcaccagct 227 | |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 70827 caggcctggatctggccaggctggaagcttccatcttttttcaccacttggtcaccagct 70886 Query: 228 tcag 231 |||| Sbjct: 70887 tcag 70890 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 47 tcggtccacctcgacgacatgctctacgaggatccctgcaagttcaatccatggaggtgg 106 |||||||||||||| || ||||||||||| || |||| ||||||||| ||||| |||| | Sbjct: 70203 tcggtccacctcgatgatatgctctacgatgagccctacaagttcaacccatgaaggtcg 70262 Query: 107 aagg 110 |||| Sbjct: 70263 aagg 70266
>ref|XM_476110.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1422 Score = 71.9 bits (36), Expect = 2e-09 Identities = 144/180 (80%) Strand = Plus / Plus Query: 127 tagcagcttcaccccttttggtggtgggcagaggctgtgcccgggcctggatctggccag 186 |||| ||||||| || ||||| || ||||| ||||| |||||||| || || ||||||| Sbjct: 1230 tagcggcttcactccctttgggggcgggcaaaggctatgcccggggctagacttggccag 1289 Query: 187 gctggaagcttccatctttctccaccacttggtcaccagcttcagttgggtggccgagga 246 ||| | | |||||||||||||||||| | ||||| | |||| |||||||| ||| Sbjct: 1290 gctccagacctccatctttctccaccacctcgtcactaatttcacgtgggtggcacaggg 1349 Query: 247 ggaccacatcgtcaacttccccaccgtgcgcctcaagggaggcatgcccatcagggtcac 306 |||| | ||||||||||||| || ||||| ||||| |||| |||||||||| |||||| Sbjct: 1350 ggacgtcgtcgtcaacttcccaacagtgcggctcaaacgaggaatgcccatcaaggtcac 1409
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 255 tcgtcaacttccccaccgtgcgcctcaagggaggcatgcccatcagggtcac 306 ||||||||||||| || ||||| ||||| |||| |||||||||| |||||| Sbjct: 138369 tcgtcaacttcccaacagtgcggctcaaacgaggaatgcccatcaaggtcac 138420 Score = 48.1 bits (24), Expect = 0.024 Identities = 72/88 (81%) Strand = Plus / Plus Query: 127 tagcagcttcaccccttttggtggtgggcagaggctgtgcccgggcctggatctggccag 186 |||| ||||||| || ||||| || ||||| ||||| |||||||| || || ||||||| Sbjct: 137601 tagcggcttcactccctttgggggcgggcaaaggctatgcccggggctagacttggccag 137660 Query: 187 gctggaagcttccatctttctccaccac 214 ||| | | |||||||||||||||||| Sbjct: 137661 gctccagacctccatctttctccaccac 137688
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 255 tcgtcaacttccccaccgtgcgcctcaagggaggcatgcccatcagggtcac 306 ||||||||||||| || ||||| ||||| |||| |||||||||| |||||| Sbjct: 21155 tcgtcaacttcccaacagtgcggctcaaacgaggaatgcccatcaaggtcac 21206 Score = 48.1 bits (24), Expect = 0.024 Identities = 72/88 (81%) Strand = Plus / Plus Query: 127 tagcagcttcaccccttttggtggtgggcagaggctgtgcccgggcctggatctggccag 186 |||| ||||||| || ||||| || ||||| ||||| |||||||| || || ||||||| Sbjct: 20387 tagcggcttcactccctttgggggcgggcaaaggctatgcccggggctagacttggccag 20446 Query: 187 gctggaagcttccatctttctccaccac 214 ||| | | |||||||||||||||||| Sbjct: 20447 gctccagacctccatctttctccaccac 20474
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 289 catgcccatcagggtcaccgccag 312 |||||||||||||||||||||||| Sbjct: 1255794 catgcccatcagggtcaccgccag 1255817
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 255 tcgtcaacttccccaccgtgcgcctcaagggaggcatgcccatcagggtcac 306 ||||||||||||| || ||||| ||||| |||| |||||||||| |||||| Sbjct: 6190800 tcgtcaacttcccaacagtgcggctcaaacgaggaatgcccatcaaggtcac 6190851 Score = 48.1 bits (24), Expect = 0.024 Identities = 72/88 (81%) Strand = Plus / Plus Query: 127 tagcagcttcaccccttttggtggtgggcagaggctgtgcccgggcctggatctggccag 186 |||| ||||||| || ||||| || ||||| ||||| |||||||| || || ||||||| Sbjct: 6190032 tagcggcttcactccctttgggggcgggcaaaggctatgcccggggctagacttggccag 6190091 Query: 187 gctggaagcttccatctttctccaccac 214 ||| | | |||||||||||||||||| Sbjct: 6190092 gctccagacctccatctttctccaccac 6190119
>gb|AC126459.3| Mus musculus BAC clone RP23-181A8 from chromosome 9, complete sequence Length = 217068 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gcccgggcctggatctggccaggct 189 |||| |||||||||||||||||||| Sbjct: 137190 gccctggcctggatctggccaggct 137214
>gb|AC008362.5|AC008362 Drosophila melanogaster, chromosome 3R, region 90D-90E, BAC clone BACR01C15, complete sequence Length = 153048 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 361 ccacagcagtcaagccagccaaagc 385 |||||||||||||| |||||||||| Sbjct: 122511 ccacagcagtcaagtcagccaaagc 122535
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ggccgaggaggaccacatcgt 258 ||||||||||||||||||||| Sbjct: 5641395 ggccgaggaggaccacatcgt 5641415
>gb|AE003720.3| Drosophila melanogaster chromosome 3R, section 58 of 118 of the complete sequence Length = 228842 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 361 ccacagcagtcaagccagccaaagc 385 |||||||||||||| |||||||||| Sbjct: 167942 ccacagcagtcaagtcagccaaagc 167966
>gb|AC101719.10| Mus musculus chromosome 7, clone RP23-294K15, complete sequence Length = 179321 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 30601 tacatgtgcatatatataat 30620
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 catgcccatcagggtcaccgccag 312 |||||||||||| ||||||||||| Sbjct: 1187971 catgcccatcagcgtcaccgccag 1187994
>gb|AC149488.1| Solanum demissum chromosome 11 clone PGEC542 map MAP_LOC, complete sequence Length = 117252 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 26501 tacatgtgcatatatataat 26520
>gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome 7, complete sequence Length = 220916 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ccccttttggtggtgggcagaggc 161 |||||||||||| ||||||||||| Sbjct: 153185 ccccttttggtgctgggcagaggc 153208
>gb|AC145120.1| Solanum demissum chromosome 5 BAC PGEC446O19 genomic sequence, complete sequence Length = 122450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 43222 tacatgtgcatatatataat 43241
>ref|NM_010927.1| Mus musculus nitric oxide synthase 2, inducible, macrophage (Nos2), mRNA Length = 3991 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 651 atctggccaggctggaagct 670
>ref|XM_717445.1| Candida albicans SC5314 putative cell surface flocculin (CaO19_1490), mRNA Length = 4230 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tggaggtggaaggagaagga 117 |||||||||||||||||||| Sbjct: 511 tggaggtggaaggagaagga 492
>ref|XM_717308.1| Candida albicans SC5314 putative cell surface flocculin (CaO19_9067), mRNA Length = 4230 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tggaggtggaaggagaagga 117 |||||||||||||||||||| Sbjct: 511 tggaggtggaaggagaagga 492
>gb|AC124433.4| Mus musculus BAC clone RP24-248P14 from chromosome 13, complete sequence Length = 169876 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gaggatccctgcaagttcaa 93 |||||||||||||||||||| Sbjct: 20532 gaggatccctgcaagttcaa 20551
>ref|XM_001004823.1| PREDICTED: Mus musculus similar to Nitric oxide synthase, inducible (NOS type II) (Inducible NO synthase) (Inducible NOS) (iNOS) (Macrophage NOS) (MAC-NOS) (LOC673161), mRNA Length = 900 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 377 atctggccaggctggaagct 396
>gb|BC062378.1| Mus musculus nitric oxide synthase 2, inducible, macrophage, mRNA (cDNA clone MGC:68162 IMAGE:4978648), complete cds Length = 4112 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 659 atctggccaggctggaagct 678
>gb|AC139576.3| Mus musculus BAC clone RP23-364L23 from chromosome 7, complete sequence Length = 152489 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 54516 tacatgtgcatatatataat 54497
>gb|AC128698.4| Mus musculus BAC clone RP24-127J4 from chromosome 9, complete sequence Length = 148461 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 agcttccatctttctccacc 212 |||||||||||||||||||| Sbjct: 17746 agcttccatctttctccacc 17765
>emb|CR956613.2|RP43043M20 Pan troglodytes chromosome X BAC RP43-043M20, complete sequence Length = 81986 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 73095 tacatgtgcatatatataat 73114
>gb|AC114826.6| Mus musculus BAC clone RP24-156O12 from chromosome 5, complete sequence Length = 179886 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 gaggtggaaggagaaggacgtgag 123 |||||||| ||||||||||||||| Sbjct: 44846 gaggtggatggagaaggacgtgag 44869
>gb|AC099609.8| Mus musculus chromosome 7, clone RP23-376D24, complete sequence Length = 226284 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gcttccatctttctccacca 213 |||||||||||||||||||| Sbjct: 63159 gcttccatctttctccacca 63178
>gb|AC120124.9| Mus musculus chromosome 7, clone RP23-21A23, complete sequence Length = 237001 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gaggatccctgcaagttcaa 93 |||||||||||||||||||| Sbjct: 134468 gaggatccctgcaagttcaa 134487
>emb|AL353733.14| Human DNA sequence from clone RP11-143N16 on chromosome 9, complete sequence Length = 95442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 ttacatgtgcatatatataa 410 |||||||||||||||||||| Sbjct: 6241 ttacatgtgcatatatataa 6260
>emb|AL109609.5|HSJ556A22 Human DNA sequence from clone RP4-556A22 on chromosome Xp21.1-21.3 Contains part of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), complete sequence Length = 109098 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 11034 tacatgtgcatatatataat 11015
>emb|AJ223999.1|AOPCZA363 Amycolatopsis orientalis cosmid PCZA363 Length = 34244 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cccatcagggtcaccgccag 312 |||||||||||||||||||| Sbjct: 23780 cccatcagggtcaccgccag 23761
>emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on chromosome 11 Contains a novel gene, the Nos2 gene for inducible macrophage nitric oxide synthase 2 and the 3' end of the Lgals9 gene for soluble galactose binding lectin 9, complete sequence Length = 178443 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 144009 atctggccaggctggaagct 144028
>gb|AC131566.1| Homo sapiens chromosome 16 clone RP11-141N14, complete sequence Length = 91907 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cctggatctggccaggctggaagcttcc 199 ||||||||| ||||||||||||| |||| Sbjct: 38482 cctggatctagccaggctggaagattcc 38509
>emb|AL512589.4| Mouse DNA sequence from clone RP23-431C3 on chromosome 2, complete sequence Length = 170352 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gaggatccctgcaagttcaa 93 |||||||||||||||||||| Sbjct: 43839 gaggatccctgcaagttcaa 43820
>dbj|AP007163.1| Aspergillus oryzae RIB40 genomic DNA, SC166 Length = 338231 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 atatataatgctactgctaa 422 |||||||||||||||||||| Sbjct: 163688 atatataatgctactgctaa 163707
>gb|AY090567.1| Mus musculus strain ICR inducible nitric oxide synthase (Nos2) mRNA, complete cds Length = 3447 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 470 atctggccaggctggaagct 489
>gb|AC007596.7| Homo sapiens chromosome 16 clone RP11-116B6, complete sequence Length = 186210 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cctggatctggccaggctggaagcttcc 199 ||||||||| ||||||||||||| |||| Sbjct: 10979 cctggatctagccaggctggaagattcc 11006
>gb|AF427516.1|AF427516 Mus musculus inducible nitric oxide synthase gene, complete cds Length = 38817 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 14399 atctggccaggctggaagct 14418
>gb|AC020732.4|AC020732 Homo sapiens BAC clone RP11-556H16 from X, complete sequence Length = 181559 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 148339 tacatgtgcatatatataat 148320
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 taatgctactgctaaaagtatgtg 431 ||||||||||||||||| |||||| Sbjct: 9923098 taatgctactgctaaaattatgtg 9923075
>gb|AF065922.2|AF065922 Mus musculus strain SJL/J nitric oxide synthase 2 (Nos2) mRNA, complete cds Length = 3515 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 520 atctggccaggctggaagct 539
>gb|AC149053.3| Mus musculus BAC clone RP24-502E20 from chromosome 7, complete sequence Length = 221785 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gaggatccctgcaagttcaa 93 |||||||||||||||||||| Sbjct: 193280 gaggatccctgcaagttcaa 193261
>gb|AC133565.5| Homo sapiens chromosome 16 clone RP11-895K13, complete sequence Length = 168538 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 cctggatctggccaggctggaagcttcc 199 ||||||||| ||||||||||||| |||| Sbjct: 37046 cctggatctagccaggctggaagattcc 37019
>gb|AF249327.1|AF249327 Rattus norvegicus TGF-beta 1 gene, promoter sequence Length = 4595 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gaggatccctgcaagttcaa 93 |||||||||||||||||||| Sbjct: 2060 gaggatccctgcaagttcaa 2041
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 taatgctactgctaaaagtatgtg 431 ||||||||||||||||| |||||| Sbjct: 119733 taatgctactgctaaaattatgtg 119710
>gb|AF170704.1|AF170704 Streptomyces spectabilis SpcC (spcC) gene, partial cds; SpcB (spcB), SpcA (spcA), SpcT (spcT), SpcN (spcN), and SpcZ (spcZ) genes, complete cds; and unknown gene, partial cds Length = 6682 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgtcaacttccccaccgtgc 275 |||||||||||||||||||| Sbjct: 3957 cgtcaacttccccaccgtgc 3976
>gb|AF065923.2|AF065923 Mus musculus strain NOD/LtJ nitric oxide synthase 2 (Nos2) mRNA, complete cds Length = 3515 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 520 atctggccaggctggaagct 539
>gb|AF065921.2|AF065921 Mus musculus strain B10.S/J nitric oxide synthase 2 (Nos2) mRNA, complete cds Length = 3642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 647 atctggccaggctggaagct 666
>gb|AC101221.11| Mus musculus chromosome 13, clone RP23-96E4, complete sequence Length = 258193 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gaggatccctgcaagttcaa 93 |||||||||||||||||||| Sbjct: 106767 gaggatccctgcaagttcaa 106748
>gb|U43428.1|MMU43428 Mus musculus inducible nitric oxide synthase mRNA, complete cds Length = 3721 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 538 atctggccaggctggaagct 557
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cctcgacgacatgctctacg 74 |||||||||||||||||||| Sbjct: 2396929 cctcgacgacatgctctacg 2396948
>gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosome 7, complete sequence Length = 202422 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gaggatccctgcaagttcaa 93 |||||||||||||||||||| Sbjct: 169086 gaggatccctgcaagttcaa 169105
>gb|AF065920.1|AF065920 Mus musculus strain DBA/2J nitric oxide synthase 2 (Nos2) mRNA, complete cds Length = 3642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 647 atctggccaggctggaagct 666
>gb|AF065919.1|AF065919 Mus musculus strain BALB/cByJ nitric oxide synthase 2 (Nos2) mRNA, complete cds Length = 3642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 647 atctggccaggctggaagct 666
>gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, complete sequence Length = 190996 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggtggaaggagaaggacgtgag 123 |||||||| ||||||||||||||| Sbjct: 62041 gaggtggatggagaaggacgtgag 62018
>gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome 7, complete sequence Length = 221010 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ccccttttggtggtgggcagaggc 161 |||||||||||| ||||||||||| Sbjct: 59624 ccccttttggtgctgggcagaggc 59647
>emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chromosome 4, complete sequence Length = 179035 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tacatgtgcatatatataat 411 |||||||||||||||||||| Sbjct: 169822 tacatgtgcatatatataat 169803
>gb|M92649.1|MUSNTRCOX Mus musculus nitric oxide synthase mRNA Length = 4110 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 658 atctggccaggctggaagct 677
>gb|M84373.1|MUSNOSA Murine nitric oxide synthase (MAC-NOS) gene, complete cds Length = 3991 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 651 atctggccaggctggaagct 670
>gb|M87039.1|MUSINOSL Mus musculus nitric oxide synthase (iNOSl) mRNA, complete cds Length = 3690 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atctggccaggctggaagct 196 |||||||||||||||||||| Sbjct: 722 atctggccaggctggaagct 741 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,499,675 Number of Sequences: 3902068 Number of extensions: 4499675 Number of successful extensions: 85771 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85429 Number of HSP's gapped (non-prelim): 341 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)