ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltransferase mRNA, complete cds Length = 1782 Score = 569 bits (287), Expect = e-159 Identities = 355/375 (94%), Gaps = 2/375 (0%) Strand = Plus / Plus Query: 177 aagatggagaccatcaccgtcgtcgagaatgcgttcggggaggtggagcgcaaggtgcag 236 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 48 aagatggacaccatcaccgtcgtcgagaatgtgttcggggaggtggagcgcaaggtgcag 107 Query: 237 aagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatgctcgactcc 296 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 108 aagagctactgggaggagcactccaaggacctcaccgtggagtccatgatgctcgactcc 167 Query: 297 cgcgccaaggacctcgacaaggaggagcgcccagaggtgctggccatcctcccgtcctat 356 ||||||||||||||||||||||||||| | || ||||||||||||||||||||||| || Sbjct: 168 cgcgccaaggacctcgacaaggaggagaggcctgaggtgctggccatcctcccgtcgtac 227 Query: 357 gagggcaagactgtgctggagctcggcgccggcatcggccgctttaccggcgagctggcc 416 | ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 228 gcgggcaagacggtgctggagctcggcgccggcatcggccgcttcaccggcgagctggcc 287 Query: 417 aaggaggccggccacgtcatcgcgctggacttcatcgacagcgtcatcaagaagaacgag 476 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 288 aaggaggccggccacgtcatcgcgctcgacttcatcgacagcgtcatcaagaagaacgag 347 Query: 477 gagatcaatgggcacatccacagcaacatcacctttcatgtgcgcccgacgtgacgtcgc 536 |||||||||||| ||||| ||| ||||||||| |||||||||| ||||||| || |||| Sbjct: 348 gagatcaatggggacatctacaagaacatcacc-ttcatgtgcg-ccgacgtcacctcgc 405 Query: 537 cggagctcaagatcg 551 ||||||||||||||| Sbjct: 406 cggagctcaagatcg 420
>emb|AJ234432.1|HVU234432 Hordeum vulgare partial mRNA; clone cMWG0706 Length = 724 Score = 505 bits (255), Expect = e-140 Identities = 281/287 (97%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 266 cctcaccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 cctcaccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcg 62 Query: 326 cccagaggtgctggccatcctcccgtcctatgagggcaagactgtgctggagctcggcgc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 cccagaggtgctggccatcctcccgtcctatgagggcaagactgtgctggagctcggcgc 122 Query: 386 cggcatcggccgctttaccg-gcgagctggccaaggaggccggccacgtcatcgcgctgg 444 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 123 cggcatcggccgctttaccgsgcgagctggccaaggaggscggccacgtcatcgcgctgg 182 Query: 445 acttcatcgacagcgtcatcaagaagaacgaggagatcaatgggcacatccacagcaaca 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 acttcatcgacagcgtcatcaagaagaacgaggagatcaatgggcacatccacagcaaca 242 Query: 505 tcacctttcatgtgcgcccgacgtgacgtcgccggagctcaagatcg 551 ||||| |||||||||| ||||||||||||||| |||| ||||||||| Sbjct: 243 tcacc-ttcatgtgcg-ccgacgtgacgtcgcgggagstcaagatcg 287
>gb|AY103779.1| Zea mays PCO126548 mRNA sequence Length = 2333 Score = 172 bits (87), Expect = 8e-40 Identities = 108/115 (93%) Strand = Plus / Plus Query: 211 tcggggaggtggagcgcaaggtgcagaagagctactgggaggagcactccaaggacctca 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 444 tcggggaggtggagcgcaaggtgcagaagagctactgggaggagcactccaagtgcctca 503 Query: 271 ccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcg 325 | |||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 504 ctgtcgagtccatgatgctcgactcccgcgccgccgacctcgacaaggaagagcg 558
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 168 bits (85), Expect = 1e-38 Identities = 115/125 (92%) Strand = Plus / Minus Query: 211 tcggggaggtggagcgcaaggtgcagaagagctactgggaggagcactccaaggacctca 270 |||||||||||||| | |||| |||| |||||||||||||||||||||||||||||||| Sbjct: 18141 tcggggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctca 18082 Query: 271 ccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcgcccag 330 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 18081 ccgtcgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccg 18022 Query: 331 aggtg 335 ||||| Sbjct: 18021 aggtg 18017
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 168 bits (85), Expect = 1e-38 Identities = 115/125 (92%) Strand = Plus / Minus Query: 211 tcggggaggtggagcgcaaggtgcagaagagctactgggaggagcactccaaggacctca 270 |||||||||||||| | |||| |||| |||||||||||||||||||||||||||||||| Sbjct: 43982 tcggggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctca 43923 Query: 271 ccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcgcccag 330 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 43922 ccgtcgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccg 43863 Query: 331 aggtg 335 ||||| Sbjct: 43862 aggtg 43858
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 168 bits (85), Expect = 1e-38 Identities = 115/125 (92%) Strand = Plus / Minus Query: 211 tcggggaggtggagcgcaaggtgcagaagagctactgggaggagcactccaaggacctca 270 |||||||||||||| | |||| |||| |||||||||||||||||||||||||||||||| Sbjct: 27011559 tcggggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctca 27011500 Query: 271 ccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcgcccag 330 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 27011499 ccgtcgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccg 27011440 Query: 331 aggtg 335 ||||| Sbjct: 27011439 aggtg 27011435 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cccctcttctctccctctct 29 |||||||||||||||||||| Sbjct: 2193742 cccctcttctctccctctct 2193723
>ref|XM_475841.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 167 bits (84), Expect = 5e-38 Identities = 114/124 (91%) Strand = Plus / Plus Query: 211 tcggggaggtggagcgcaaggtgcagaagagctactgggaggagcactccaaggacctca 270 |||||||||||||| | |||| |||| |||||||||||||||||||||||||||||||| Sbjct: 26 tcggggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctca 85 Query: 271 ccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcgcccag 330 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 86 ccgtcgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccg 145 Query: 331 aggt 334 |||| Sbjct: 146 aggt 149
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 159 bits (80), Expect = 1e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 228 aaggtgcagaagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatg 287 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 28733766 aaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcgaggccatgatg 28733825 Query: 288 ctcgactcccgcgccaaggacctcgacaaggaggagcgcccagaggtg 335 ||||||||||||||| || |||||||||||||||||||| |||||| Sbjct: 28733826 ctcgactcccgcgccgccgatctcgacaaggaggagcgccccgaggtg 28733873 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 gtgctggagctcggcgccggc 389 ||||||||||||||||||||| Sbjct: 42005314 gtgctggagctcggcgccggc 42005334 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 gcgtcatcaagaagaacgaggaga 480 ||||| |||||||||||||||||| Sbjct: 11705394 gcgtcgtcaagaagaacgaggaga 11705417
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 159 bits (80), Expect = 1e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 228 aaggtgcagaagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatg 287 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 116840 aaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcgaggccatgatg 116899 Query: 288 ctcgactcccgcgccaaggacctcgacaaggaggagcgcccagaggtg 335 ||||||||||||||| || |||||||||||||||||||| |||||| Sbjct: 116900 ctcgactcccgcgccgccgatctcgacaaggaggagcgccccgaggtg 116947
>ref|NM_192178.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 153 bits (77), Expect = 7e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 228 aaggtgcagaagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatg 287 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 55 aaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcgaggccatgatg 114 Query: 288 ctcgactcccgcgccaaggacctcgacaaggaggagcgccc 328 ||||||||||||||| || |||||||||||||||||||| Sbjct: 115 ctcgactcccgcgccgccgatctcgacaaggaggagcgccc 155
>gb|AY551100.1| Oryza sativa (indica cultivar-group) phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1986 Score = 153 bits (77), Expect = 7e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 228 aaggtgcagaagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatg 287 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 253 aaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcgaggccatgatg 312 Query: 288 ctcgactcccgcgccaaggacctcgacaaggaggagcgccc 328 ||||||||||||||| || |||||||||||||||||||| Sbjct: 313 ctcgactcccgcgccgccgatctcgacaaggaggagcgccc 353
>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06, full insert sequence Length = 3221 Score = 153 bits (77), Expect = 7e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 228 aaggtgcagaagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatg 287 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 305 aaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcgaggccatgatg 364 Query: 288 ctcgactcccgcgccaaggacctcgacaaggaggagcgccc 328 ||||||||||||||| || |||||||||||||||||||| Sbjct: 365 ctcgactcccgcgccgccgatctcgacaaggaggagcgccc 405
>dbj|AK069137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008P07, full insert sequence Length = 2069 Score = 153 bits (77), Expect = 7e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 228 aaggtgcagaagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatg 287 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 338 aaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcgaggccatgatg 397 Query: 288 ctcgactcccgcgccaaggacctcgacaaggaggagcgccc 328 ||||||||||||||| || |||||||||||||||||||| Sbjct: 398 ctcgactcccgcgccgccgatctcgacaaggaggagcgccc 438
>gb|AY626156.3| Zea mays putative phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1806 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 228 aaggtgcagaagagctactgggaggagcactccaaggacctcaccgtcgagtccatgatg 287 |||| |||||||||||||||||||||||||||| ||| |||| | ||||| |||| ||| Sbjct: 195 aaggcgcagaagagctactgggaggagcactccggggagctcaacctcgaggccattatg 254 Query: 288 ctcgactcccgcgccaaggacctcgacaaggaggagcgcccagaggt 334 ||||||||||| ||| || |||||||||||||||||||| ||||| Sbjct: 255 ctcgactcccgtgccgccgaactcgacaaggaggagcgccccgaggt 301
>ref|NM_062590.1| Caenorhabditis elegans ZK622.3b (ZK622.3) mRNA, complete cds Length = 1455 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 444 gacttcatcgacagcgtcatcaagaagaacgagga 478 ||||||||||||||| |||||||||||||| |||| Sbjct: 307 gacttcatcgacagcttcatcaagaagaaccagga 341
>ref|NM_182197.3| Caenorhabditis elegans ZK622.3c (ZK622.3) mRNA, complete cds Length = 1436 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 444 gacttcatcgacagcgtcatcaagaagaacgagga 478 ||||||||||||||| |||||||||||||| |||| Sbjct: 288 gacttcatcgacagcttcatcaagaagaaccagga 322
>ref|NM_182198.3| Caenorhabditis elegans ZK622.3d (ZK622.3) mRNA, complete cds Length = 1436 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 444 gacttcatcgacagcgtcatcaagaagaacgagga 478 ||||||||||||||| |||||||||||||| |||| Sbjct: 288 gacttcatcgacagcttcatcaagaagaaccagga 322
>ref|NM_062589.3| Caenorhabditis elegans ZK622.3a (ZK622.3) mRNA, complete cds Length = 1736 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 444 gacttcatcgacagcgtcatcaagaagaacgagga 478 ||||||||||||||| |||||||||||||| |||| Sbjct: 296 gacttcatcgacagcttcatcaagaagaaccagga 330
>gb|U39998.1| Caenorhabditis elegans cosmid ZK622, complete sequence Length = 31226 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 444 gacttcatcgacagcgtcatcaagaagaacgagga 478 ||||||||||||||| |||||||||||||| |||| Sbjct: 3144 gacttcatcgacagcttcatcaagaagaaccagga 3110
>gb|AC148017.3| Mus musculus BAC clone RP23-56O18 from chromosome 18, complete sequence Length = 152497 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 |||||||||||||||||||||||||| Sbjct: 89750 aaaaaccaaaccaaaacaaccaaacc 89725
>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence Length = 187090 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||||||||| Sbjct: 25545 aaaaaccaaaccaaaacaaccaaac 25569
>ref|XM_806444.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506579.110) partial mRNA Length = 2934 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 360 ggcaagactgtgctggagctcggcgccgg 388 |||||||||||||||||||| |||||||| Sbjct: 349 ggcaagactgtgctggagcttggcgccgg 377
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||||||||| Sbjct: 9780 aaaaaccaaaccaaaacaaccaaac 9756
>gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, complete sequence Length = 215485 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||||||||| Sbjct: 167596 aaaaaccaaaccaaaacaaccaaac 167572
>gb|AC107692.7| Mus musculus chromosome 3, clone RP24-387H23, complete sequence Length = 148965 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||||||| Sbjct: 135991 aaaaccaaaccaaaacaaccaaac 136014
>ref|XM_991030.1| PREDICTED: Mus musculus expressed sequence AW011738 (AW011738), mRNA Length = 2797 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaa 140 |||||||||||||||||||||||| Sbjct: 1530 aaaaaccaaaccaaaacaaccaaa 1553
>ref|XM_001001227.1| PREDICTED: Mus musculus expressed sequence AW011738 (AW011738), mRNA Length = 2798 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaa 140 |||||||||||||||||||||||| Sbjct: 1531 aaaaaccaaaccaaaacaaccaaa 1554
>gb|AC145877.3| Pan troglodytes BAC clone RP43-20I7 from 7, complete sequence Length = 192794 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||||||| Sbjct: 107548 aaaaccaaaccaaaacaaccaaac 107525
>gb|AC009196.14| Homo sapiens chromosome 7 clone RP11-49B7, complete sequence Length = 170763 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||||||| Sbjct: 63258 aaaaccaaaccaaaacaaccaaac 63281
>dbj|AK036383.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830002K14 product:unclassifiable, full insert sequence Length = 1847 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaa 140 |||||||||||||||||||||||| Sbjct: 1457 aaaaaccaaaccaaaacaaccaaa 1480
>dbj|AK085774.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830007D18 product:unclassifiable, full insert sequence Length = 1941 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaa 140 |||||||||||||||||||||||| Sbjct: 1459 aaaaaccaaaccaaaacaaccaaa 1482
>dbj|AK078660.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length enriched library, clone:7330443J04 product:unclassifiable, full insert sequence Length = 2755 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaa 140 |||||||||||||||||||||||| Sbjct: 1459 aaaaaccaaaccaaaacaaccaaa 1482
>gb|AC078844.2|AC078844 Homo sapiens chromosome 7 clone RP11-786M13, complete sequence Length = 186927 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||||||| Sbjct: 144861 aaaaccaaaccaaaacaaccaaac 144884
>gb|AC117651.8| Mus musculus chromosome 3, clone RP23-287I17, complete sequence Length = 229602 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||||||| Sbjct: 71809 aaaaccaaaccaaaacaaccaaac 71832
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||||||||| ||||| Sbjct: 153611 taaaaaccaaaccaaaacaacaaaacc 153637
>gb|AC153900.8| Mus musculus 6 BAC RP23-36I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194216 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 186825 aaaaccaaaccaaaacaaccaaa 186803
>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence Length = 169596 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 taaaaaccaaaccaaaacaaccaaacc 142 |||||||||||||||| |||||||||| Sbjct: 125151 taaaaaccaaaccaaaccaaccaaacc 125125
>gb|AC154597.2| Mus musculus BAC clone RP23-355G2 from chromosome 14, complete sequence Length = 201544 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 aaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||||||| Sbjct: 136340 aaaccaaaccaaaacaaccaaac 136362
>ref|NM_009035.3| Mus musculus recombining binding protein suppressor of hairless (Drosophila) (Rbpsuh), mRNA Length = 3991 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1849 aaaaccaaaccaaaacaaccaaa 1827
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 186105 aaaaccaaaccaaaacaaccaaa 186083
>gb|AC124742.4| Mus musculus BAC clone RP23-210N16 from 12, complete sequence Length = 208101 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 119 aaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||||||| Sbjct: 90230 aaaccaaaccaaaacaaccaaac 90208
>gb|AC112268.3| Mus musculus BAC clone RP24-114C23 from 2, complete sequence Length = 167775 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaacc 142 |||||||||||||||| |||||||||| Sbjct: 134472 taaaaaccaaaccaaaccaaccaaacc 134498
>gb|BC051387.1| Mus musculus recombining binding protein suppressor of hairless (Drosophila), mRNA (cDNA clone MGC:54902 IMAGE:4460290), complete cds Length = 4038 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1777 aaaaccaaaccaaaacaaccaaa 1755
>dbj|AK145187.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930015G21 product:recombining binding protein suppressor of hairless (Drosophila), full insert sequence Length = 4212 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1740 aaaaccaaaccaaaacaaccaaa 1718
>dbj|AK132145.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3221401K01 product:recombining binding protein suppressor of hairless (Drosophila), full insert sequence Length = 5353 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1788 aaaaccaaaccaaaacaaccaaa 1766
>dbj|AK139087.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730017C02 product:recombining binding protein suppressor of hairless (Drosophila), full insert sequence Length = 5210 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1732 aaaaccaaaccaaaacaaccaaa 1710
>dbj|AK152746.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083K15 product:recombining binding protein suppressor of hairless (Drosophila), full insert sequence Length = 4100 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1848 aaaaccaaaccaaaacaaccaaa 1826
>dbj|AK153526.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830170J24 product:recombining binding protein suppressor of hairless (Drosophila), full insert sequence Length = 2672 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 526 aaaaccaaaccaaaacaaccaaa 504
>dbj|AK153163.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830125M06 product:recombining binding protein suppressor of hairless (Drosophila), full insert sequence Length = 3989 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1736 aaaaccaaaccaaaacaaccaaa 1714
>gb|S63463.1| J kappa recombination signal sequence binding protein [mice, pre B cell line 38B9, mRNA, 3991 nt] Length = 3991 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1849 aaaaccaaaccaaaacaaccaaa 1827
>gb|BC035299.1| Mus musculus recombining binding protein suppressor of hairless (Drosophila), mRNA (cDNA clone IMAGE:3983555), partial cds Length = 3817 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1634 aaaaccaaaccaaaacaaccaaa 1612
>dbj|AK028363.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830423J02 product:recombining binding protein suppressor of hairless (Drosophila), full insert sequence Length = 4380 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 2006 aaaaccaaaccaaaacaaccaaa 1984
>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206705 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 145903 aaaaccaaaccaaaacaaccaaa 145925
>emb|AL929126.25| Mouse DNA sequence from clone RP23-424N5 on chromosome 2, complete sequence Length = 151556 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 55329 aaaaccaaaccaaaacaaccaaa 55307
>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete sequence Length = 194209 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaacc 142 |||||||||||||||| |||||||||| Sbjct: 31146 taaaaaccaaaccaaaccaaccaaacc 31172
>emb|AL772359.8| Mouse DNA sequence from clone RP23-305E10 on chromosome 11, complete sequence Length = 105736 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||||| Sbjct: 18406 aaaaaccaaaccaaaacaaccaa 18384
>emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chromosome 4, complete sequence Length = 210306 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||||| Sbjct: 182465 aaaaaccaaaccaaaacaaccaa 182443
>emb|X17459.1|MMJKRSB Mouse mRNA for J kappa RS-binding protein Length = 3986 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||||| Sbjct: 1844 aaaaccaaaccaaaacaaccaaa 1822
>emb|AL626806.14| Mouse DNA sequence from clone RP23-146I18 on chromosome 4, complete sequence Length = 165969 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 aaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||||||| Sbjct: 8498 aaaccaaaccaaaacaaccaaac 8520
>gb|AC161382.4| Mus musculus BAC clone RP23-25A17 from chromosome 9, complete sequence Length = 169123 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaac 141 |||||||||||||||| ||||||||| Sbjct: 47158 taaaaaccaaaccaaaccaaccaaac 47183
>gb|AC145398.2| Rattus norvegicus chromosome 1 clone RP32-604H24 map q35-q36, complete sequence Length = 165235 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaac 141 |||||||||||||||| ||||||||| Sbjct: 132443 taaaaaccaaaccaaaccaaccaaac 132468
>gb|AC145397.1| Rattus norvegicus chromosome 1 clone RP32-96B07 map q35-q36, complete sequence Length = 156967 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaac 141 |||||||||||||||| ||||||||| Sbjct: 92196 taaaaaccaaaccaaaccaaccaaac 92221
>gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complete sequence Length = 176278 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 cttccttccttccaaacaaaca 67 |||||||||||||||||||||| Sbjct: 71136 cttccttccttccaaacaaaca 71115
>gb|AC073230.8| Homo sapiens BAC clone RP11-682N22 from 7, complete sequence Length = 183523 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 115 gtaaaaaccaaaccaaaacaac 136 |||||||||||||||||||||| Sbjct: 21712 gtaaaaaccaaaccaaaacaac 21733
>emb|AL606462.5| Human DNA sequence from clone CTD-2090I13 on chromosome 1 Contains a novel gene, a nuclear ubiquitous casein kinase and cyclin-dependent kinase substrate (NUCKS) pseudogene, a ribosomal protein S18 (RPS18) pseudogene and a pseudogene similar to part ofbasic transcription factor 3 (BTF3), complete sequence Length = 112401 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||| ||||| Sbjct: 90025 taaaaaccaaaccaaaacaaacaaac 90050
>gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromosome 7, complete sequence Length = 219717 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||| |||||||||| Sbjct: 141049 aaaaaccaaaccaaaccaaccaaacc 141024
>emb|AL591136.20| Mouse DNA sequence from clone RP23-273P3 on chromosome 11 Contains the 5' end of a novel gene, two novel genes, the Taok1 gene for TAO kinase 1, a eukaryotic translation initiation factor 2 subunit 1 alpha (Eif2s1) pseudogene, a ribosomal protein S2 (Rps2) pseudogene, the Cryba1 gene for crystallin beta A1 and two CpG islands, complete sequence Length = 220230 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 |||||||||||||||| ||||||||| Sbjct: 188642 aaaaaccaaaccaaaaaaaccaaacc 188617
>emb|AJ006226.1|TCR6226 Trypanosoma cruzi mpx gene encoding mitochondrial peroxiredoxin Length = 1241 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 cttccttccttccaaacaaaca 67 |||||||||||||||||||||| Sbjct: 1197 cttccttccttccaaacaaaca 1176
>gb|AC026712.7| Homo sapiens chromosome 5 clone CTD-2121K20, complete sequence Length = 112085 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||||||| |||||| Sbjct: 44381 aaaaaccaaaccaaaacaaacaaacc 44406
>gb|AC022132.6| Homo sapiens chromosome 5 clone CTD-2201J22, complete sequence Length = 112085 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||||||| |||||| Sbjct: 44381 aaaaaccaaaccaaaacaaacaaacc 44406
>gb|AC008768.8| Homo sapiens chromosome 5 clone CTD-2005G16, complete sequence Length = 139111 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||||||| |||||| Sbjct: 87135 aaaaaccaaaccaaaacaaacaaacc 87160
>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence Length = 168521 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 gtaaaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||| |||| Sbjct: 94744 gtaaaaaccaaaccaaaacaagcaaa 94719
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 gaacaagatggagaccatcacc 194 |||||||||||||||||||||| Sbjct: 570898 gaacaagatggagaccatcacc 570877
>gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, complete sequence Length = 223552 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacca 138 |||||||||||||||||||||| Sbjct: 97347 aaaaaccaaaccaaaacaacca 97326
>gb|AC154395.4| Mus musculus chromosome 3, clone RP23-373G12, complete sequence Length = 255105 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacca 138 |||||||||||||||||||||| Sbjct: 226532 aaaaaccaaaccaaaacaacca 226511
>gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A15, complete sequence Length = 193254 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 gtaaaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||| |||| Sbjct: 156095 gtaaaaaccaaaccaaaacaagcaaa 156120
>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence Length = 155354 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 gtaaaaaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||| |||| Sbjct: 116237 gtaaaaaccaaaccaaaacaagcaaa 116212
>gb|AC093732.3| Homo sapiens BAC clone RP11-15I20 from 2, complete sequence Length = 133209 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 aaccaaaccaaaacaaccaaac 141 |||||||||||||||||||||| Sbjct: 112347 aaccaaaccaaaacaaccaaac 112326
>gb|AC158665.3| Mus musculus 6 BAC RP23-102M16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207904 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 116 taaaaaccaaaccaaaacaaccaaac 141 |||||||||||||||| ||||||||| Sbjct: 98848 taaaaaccaaaccaaaccaaccaaac 98823
>emb|BX005171.9| Mouse DNA sequence from clone RP23-234H6 on chromosome X, complete sequence Length = 172077 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||| ||||| Sbjct: 19331 taaaaaccaaaccaaaacaaacaaac 19356
>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence Length = 179789 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaacca 138 |||||||||||||||||||||| Sbjct: 167627 aaaaaccaaaccaaaacaacca 167648
>emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on chromosome 2, complete sequence Length = 192345 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 aaaccccctcttctctccctct 27 |||||||||||||||||||||| Sbjct: 49642 aaaccccctcttctctccctct 49663
>emb|CT033751.4| Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence Length = 171391 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||| |||||||||| Sbjct: 10580 aaaaaccaaaccaaaccaaccaaacc 10605
>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence Length = 149387 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 ttcttccttccttccaaacaaa 65 |||||||||||||||||||||| Sbjct: 19438 ttcttccttccttccaaacaaa 19459
>emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on chromosome 11, complete sequence Length = 199634 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||| |||||||||| Sbjct: 88686 aaaaaccaaaccaaaccaaccaaacc 88711
>emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on chromosome 4, complete sequence Length = 214456 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||| |||||||||| Sbjct: 80307 aaaaaccaaaccaaaccaaccaaacc 80332
>gb|AC102324.9| Mus musculus chromosome 1, clone RP24-476A18, complete sequence Length = 129634 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaac 136 ||||||||||||||||||||| Sbjct: 70758 taaaaaccaaaccaaaacaac 70778
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 219924 aaaaaccaaaccaaaccaaccaaac 219900
>gb|AC116759.13| Mus musculus chromosome 18, clone RP23-383E12, complete sequence Length = 203049 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 166647 aaaaaccaaaccaaaccaaccaaac 166623
>gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, complete sequence Length = 201027 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 123657 aaaaaccaaaccaaaacaaacaaac 123633
>gb|AC164069.9| Mus musculus chromosome 15, clone RP23-422H17, complete sequence Length = 216364 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 138841 aaaaaccaaaccaaaacaaacaaac 138817
>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence Length = 205525 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 155462 aaaaaccaaaccaaaacaaacaaac 155438
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 73429 aaaaaccaaaccaaaccaaccaaac 73405
>gb|AC111071.8| Mus musculus chromosome 15, clone RP24-298N6, complete sequence Length = 157812 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 90589 aaaaaccaaaccaaaccaaccaaac 90613
>gb|AC109196.12| Mus musculus chromosome 5, clone RP23-313F5, complete sequence Length = 205369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 taaaaaccaaaccaaaacaac 136 ||||||||||||||||||||| Sbjct: 202635 taaaaaccaaaccaaaacaac 202615
>gb|AC162799.4| Mus musculus BAC clone RP24-392E13 from chromosome 3, complete sequence Length = 177586 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 144641 aaaaaccaaaccaaaccaaccaaac 144617
>gb|AC154737.3| Mus musculus BAC clone RP24-390A6 from chromosome 9, complete sequence Length = 113204 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 29733 aaaaaccaaaccaaaccaaccaaac 29709
>gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome 16, complete sequence Length = 206814 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 134903 aaaaaccaaaccaaaccaaccaaac 134879
>gb|AC162898.10| Mus musculus chromosome 5, clone RP23-391P21, complete sequence Length = 202279 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 67881 aaaaaccaaaccaaaccaaccaaac 67905
>ref|NM_189783.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 gtgctggagctcggcgccggc 389 ||||||||||||||||||||| Sbjct: 172 gtgctggagctcggcgccggc 192
>gb|AC102794.8| Mus musculus chromosome 3, clone RP23-235G13, complete sequence Length = 166028 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaacc 142 |||| |||||||||||||||||||| Sbjct: 7179 aaaaacaaaccaaaacaaccaaacc 7155
>gb|AC115789.9| Mus musculus chromosome 18, clone RP23-398N2, complete sequence Length = 206108 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 31663 aaaaaccaaaccaaaccaaccaaac 31639
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 cccgcgccaaggacctcgaca 315 ||||||||||||||||||||| Sbjct: 497938 cccgcgccaaggacctcgaca 497918
>gb|AC093473.6| Mus musculus chromosome 5, clone RP23-54H12, complete sequence Length = 208876 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 aaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||| Sbjct: 166005 aaaccaaaccaaaacaaccaa 166025
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 cggcgagctggccaaggaggccggc 428 |||||||||||| |||||||||||| Sbjct: 83634 cggcgagctggcgaaggaggccggc 83610
>gb|AC161484.4| Mus musculus chromosome 5, clone RP23-6C10, complete sequence Length = 249620 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||| ||||||||||||| Sbjct: 60 aaaaaccaaacaaaaacaaccaaac 84
>gb|AC111126.16| Mus musculus chromosome 5, clone RP23-336F4, complete sequence Length = 236880 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 194464 aaaaaccaaaccaaaacaaacaaac 194488
>gb|AF016663.1| Caenorhabditis elegans cosmid F21E9, complete sequence Length = 28067 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ccccctcttctctccctctct 29 ||||||||||||||||||||| Sbjct: 11965 ccccctcttctctccctctct 11985
>gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, complete sequence Length = 173767 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 65279 aaaaaccaaaccaaaacaaacaaac 65303
>gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, complete sequence Length = 176113 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 62825 aaaaaccaaaccaaaacaaacaaac 62801
>gb|AC120339.18| Mus musculus chromosome 14, clone RP23-126A8, complete sequence Length = 228458 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 116610 aaaaaccaaaccaaaacaaacaaac 116634
>gb|BC018552.1| Mus musculus DDHD domain containing 1, mRNA (cDNA clone IMAGE:3675746), partial cds Length = 1712 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 1438 aaaaaccaaaccaaaacaaacaaac 1414
>gb|AC116500.13| Mus musculus chromosome 5, clone RP24-297N9, complete sequence Length = 177689 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 67356 aaaaaccaaaccaaaacaaacaaac 67332 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||| ||||| Sbjct: 101766 aaaaccaaaccaaaacaaacaaac 101789
>gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome 18, complete sequence Length = 238060 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 165397 aaaaaccaaaccaaaccaaccaaac 165421
>gb|AC127266.4| Mus musculus BAC clone RP24-347B12 from chromosome 5, complete sequence Length = 185232 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 aaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||| Sbjct: 98906 aaaccaaaccaaaacaaccaa 98926
>gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome 5, complete sequence Length = 216207 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 63823 aaaaaccaaaccaaaacaaacaaac 63847
>gb|AC115045.13| Mus musculus chromosome 6, clone RP24-315D19, complete sequence Length = 177917 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 139510 aaaaaccaaaccaaaccaaccaaac 139486
>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete sequence Length = 185010 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaac 136 ||||||||||||||||||||| Sbjct: 179393 taaaaaccaaaccaaaacaac 179413
>gb|BC017129.1| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 6, mRNA (cDNA clone MGC:27628 IMAGE:4506255), complete cds Length = 2280 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 aaaccaaaacaaccaaacctt 144 ||||||||||||||||||||| Sbjct: 2043 aaaccaaaacaaccaaacctt 2063
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 38916 aaaaaccaaaccaaaccaaccaaac 38940
>gb|AC167135.3| Mus musculus chromosome 1, clone RP24-335L18, complete sequence Length = 157775 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 134300 aaaaaccaaaccaaaacaaacaaac 134276
>gb|AC146437.3| Pan troglodytes BAC clone RP43-15J3 from 7, complete sequence Length = 163637 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 94109 aaaaaccaaaccaaaccaaccaaac 94133
>gb|AC099415.4| Mus musculus BAC clone RP23-122D8 from chromosome 8, complete sequence Length = 215488 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 136586 aaaaaccaaaccaaaacaaacaaac 136610
>gb|AC140317.2| Mus musculus BAC clone RP23-396O18 from chromosome 5, complete sequence Length = 211953 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 114401 aaaaaccaaaccaaaacaaacaaac 114377
>gb|AC126023.3| Mus musculus BAC clone RP24-422I18 from chromosome 16, complete sequence Length = 198296 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 aaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||| Sbjct: 147431 aaccaaaccaaaacaaccaaa 147411
>ref|NM_001029842.1| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 6 (Slc16a6), transcript variant 1, mRNA Length = 4217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 aaaccaaaacaaccaaacctt 144 ||||||||||||||||||||| Sbjct: 2109 aaaccaaaacaaccaaacctt 2129
>ref|NM_134038.2| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 6 (Slc16a6), transcript variant 2, mRNA Length = 4160 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 aaaccaaaacaaccaaacctt 144 ||||||||||||||||||||| Sbjct: 2052 aaaccaaaacaaccaaacctt 2072
>gb|BT014099.1| Lycopersicon esculentum clone 133203F, mRNA sequence Length = 1992 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 267 ctcaccgtcgagtccatgatgctcgactc 295 ||||| |||||| |||||||||||||||| Sbjct: 398 ctcactgtcgaggccatgatgctcgactc 426
>gb|AC160458.4| Mus musculus chromosome 5, clone RP23-14C20, complete sequence Length = 253338 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 6265 aaaaaccaaaccaaaacaacc 6245
>gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome 16, complete sequence Length = 191050 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 178126 aaaaaccaaaccaaaacaaacaaac 178150
>gb|AC124978.19| Mus musculus chromosome 5, clone RP24-107D19, complete sequence Length = 182405 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 97000 aaaaaccaaaccaaaacaaacaaac 97024
>gb|AC120150.9| Mus musculus chromosome 16, clone RP24-241C15, complete sequence Length = 166172 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 116015 aaaaaccaaaccaaaccaaccaaac 115991
>gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, complete sequence Length = 208480 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 aaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||| Sbjct: 130646 aaccaaaccaaaacaaccaaa 130666
>gb|AC121266.25| Mus musculus chromosome 1, clone RP24-320G2, complete sequence Length = 111692 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 15655 aaaaaccaaaccaaaacaaacaaac 15631
>gb|AC153360.6| Mus musculus BAC clone RP23-321I6 from chromosome 10, complete sequence Length = 233014 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 46203 aaaaaccaaaccaaaccaaccaaac 46179
>gb|AC123719.10| Mus musculus chromosome 13, clone RP23-412A14, complete sequence Length = 202533 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 64325 aaaaaccaaaccaaaacaaacaaac 64349
>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence Length = 236510 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 159828 aaaaaccaaaccaaaccaaccaaac 159852
>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence Length = 174557 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||| ||||||||| Sbjct: 93290 aaaaccaaaccaaaaaaaccaaacc 93314
>gb|AC160101.7| Mus musculus chromosome 1, clone RP24-126E20, complete sequence Length = 159705 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 17981 aaaaaccaaaccaaaacaaacaaac 18005
>gb|AC163444.3| Mus musculus chromosome 1, clone RP23-85E22, complete sequence Length = 225533 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 123592 aaaaaccaaaccaaaacaaacaaac 123568
>gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209869 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 18840 aaaaaccaaaccaaaacaaacaaac 18816
>ref|XM_978609.1| PREDICTED: Mus musculus guanylate cyclase 2f (Gucy2f), mRNA Length = 9930 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 5966 aaaaaccaaaccaaaccaaccaaac 5942
>gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complete sequence Length = 176109 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gtaaaaaccaaaccaaaacaa 135 ||||||||||||||||||||| Sbjct: 39354 gtaaaaaccaaaccaaaacaa 39334
>gb|AC004451.2| Homo sapiens PAC clone RP4-789N1 from 7, complete sequence Length = 108642 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 98910 aaaaaccaaaccaaaccaaccaaac 98934
>gb|AC103615.8| Mus musculus chromosome 5, clone RP24-174D16, complete sequence Length = 201693 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 127697 aaaaaccaaaccaaaacaacc 127717
>gb|AY442914.1| Homo sapiens doublesex and mab-3 related transcription factor 1 b (DMRT1) mRNA, complete cds, alternatively spliced Length = 1763 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 1609 aaaaaccaaaccaaaacaaacaaac 1585
>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence Length = 157067 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 aaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||| Sbjct: 33438 aaaccaaaccaaaacaaccaa 33458
>gb|AC129324.4| Mus musculus BAC clone RP23-253G24 from chromosome 18, complete sequence Length = 166990 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 aaaccaaaccaaaacaaccaaacct 143 |||||||||||||||| |||||||| Sbjct: 122553 aaaccaaaccaaaacacccaaacct 122529
>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete sequence Length = 202398 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 gtaaaaaccaaaccaaaacaaccaa 139 ||||||||||||||||| ||||||| Sbjct: 64958 gtaaaaaccaaaccaaaccaaccaa 64934
>emb|CT025158.5| Mouse DNA sequence from clone RP23-178N11 on chromosome 16, complete sequence Length = 194555 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 16788 aaaaaccaaaccaaaacaaacaaac 16812
>emb|AJ632303.1| Sus scrofa partial ICAM3 gene, TYK2, CDC37, PDE4A, KEAP1, EDG8 and APG4D genes and partial FLJ12949 gene Length = 185331 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 43777 aaaaaccaaaccaaaacaaacaaac 43801
>ref|XM_568654.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l17 (CNN01720) partial mRNA Length = 624 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 cccgcgccaaggacctcgaca 315 ||||||||||||||||||||| Sbjct: 503 cccgcgccaaggacctcgaca 523
>gb|AC107711.13| Mus musculus chromosome 14, clone RP23-291I12, complete sequence Length = 228302 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 97502 aaaaaccaaaccaaaacaaacaaac 97526
>gb|AC127560.4| Mus musculus BAC clone RP24-267I18 from chromosome 5, complete sequence Length = 186768 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 11664 aaaaaccaaaccaaaccaaccaaac 11688
>gb|AC132099.3| Mus musculus BAC clone RP24-292F6 from chromosome 16, complete sequence Length = 160650 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaaccttc 145 ||||||||||||||||||| |||||||| Sbjct: 15525 aaaaaccaaaccaaaacaaaaaaaccttc 15553
>gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosome 18, complete sequence Length = 158065 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 120633 aaaaaccaaaccaaaccaaccaaac 120609
>gb|AC127344.3| Mus musculus BAC clone RP23-212H18 from chromosome 7, complete sequence Length = 182487 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 12257 aaaaaccaaaccaaaccaaccaaac 12281
>gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, complete sequence Length = 218657 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 52088 aaaaaccaaaccaaaacaaacaaac 52064
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 199340 aaaaaccaaaccaaaacaacc 199320
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 43 cttcttccttccttccaaacaaaca 67 ||||||||||| ||||||||||||| Sbjct: 87865 cttcttccttcattccaaacaaaca 87889
>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence Length = 175796 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 172928 aaaaaccaaaccaaaacaacc 172948
>gb|AC121985.3| Mus musculus BAC clone RP24-293C3 from chromosome 8, complete sequence Length = 150444 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 70095 aaaaaccaaaccaaaacaaacaaac 70119
>gb|AC125521.4| Mus musculus BAC clone RP24-290D7 from chromosome 15, complete sequence Length = 185147 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 27481 aaaaaccaaaccaaaacaaacaaac 27457
>gb|AC122332.4| Mus musculus BAC clone RP23-346G14 from chromosome 10, complete sequence Length = 214728 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 104323 aaaaaccaaaccaaaccaaccaaac 104299
>gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosome 17, complete sequence Length = 207817 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 69345 aaaaaccaaaccaaaacaaacaaac 69321
>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence Length = 250866 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 76395 aaaaaccaaaccaaaacaaacaaac 76419
>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence Length = 183554 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 48478 aaaaaccaaaccaaaccaaccaaac 48454
>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence Length = 209359 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 22221 aaaaaccaaaccaaaccaaccaaac 22245
>gb|AC127332.3| Mus musculus BAC clone RP23-136I1 from 5, complete sequence Length = 230629 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 230556 aaaaaccaaaccaaaacaaacaaac 230532
>gb|AC122296.4| Mus musculus BAC clone RP23-265P8 from 6, complete sequence Length = 211697 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 197566 aaaaaccaaaccaaaacaaacaaac 197590
>gb|AC124195.4| Mus musculus BAC clone RP23-285G17 from 16, complete sequence Length = 196102 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 aaccaaaccaaaacaaccaaa 140 ||||||||||||||||||||| Sbjct: 182811 aaccaaaccaaaacaaccaaa 182831
>gb|AC124531.5| Mus musculus BAC clone RP23-299D2 from 7, complete sequence Length = 191228 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 175898 aaaaaccaaaccaaaacaaacaaac 175922
>gb|AC116178.4| Mus musculus BAC clone RP23-28O18 from 14, complete sequence Length = 195306 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 77985 aaaaaccaaaccaaaccaaccaaac 78009
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence Length = 172114 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 149441 aaaaaccaaaccaaaccaaccaaac 149417
>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence Length = 192092 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 5898 aaaaaccaaaccaaaacaaacaaac 5922
>gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complete sequence Length = 131476 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||| ||||||||||||| Sbjct: 54804 aaaaaccaaacaaaaacaaccaaac 54780
>gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complete sequence Length = 234326 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 106392 aaaaaccaaaccaaaccaaccaaac 106368
>gb|AC146849.1| Pan troglodytes BAC clone RP43-163I11 from 7, complete sequence Length = 147837 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gtaaaaaccaaaccaaaacaa 135 ||||||||||||||||||||| Sbjct: 16329 gtaaaaaccaaaccaaaacaa 16309
>gb|AY425004.1| Homo sapiens estrogen receptor 1 (ESR1) gene, complete cds Length = 299637 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 157020 aaaaaccaaaccaaaccaaccaaac 157044
>gb|AC107744.8| Mus musculus chromosome 5, clone RP23-325M7, complete sequence Length = 152515 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 taaaaaccaaaccaaaacaac 136 ||||||||||||||||||||| Sbjct: 10031 taaaaaccaaaccaaaacaac 10011
>gb|AC113501.7| Mus musculus chromosome 6, clone RP23-367E20, complete sequence Length = 196932 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 78296 aaaaaccaaaccaaaccaaccaaac 78272
>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence Length = 188853 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 23174 aaaaaccaaaccaaaccaaccaaac 23198
>gb|AC165355.3| Mus musculus BAC clone RP23-129P10 from chromosome 6, complete sequence Length = 199100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 144602 aaaaaccaaaccaaaacaaacaaac 144578
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 aaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||| Sbjct: 130149 aaaccaaaccaaaacaaccaa 130169
>gb|AC160757.3| Mus musculus chromosome 3, clone RP23-200C3, complete sequence Length = 228862 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaacc 142 |||| |||||||||||||||||||| Sbjct: 88574 aaaaacaaaccaaaacaaccaaacc 88598
>gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosome 17, complete sequence Length = 178703 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 94911 aaaaaccaaaccaaaccaaccaaac 94935
>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence Length = 228750 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 174168 aaaaaccaaaccaaaacaaacaaac 174192
>gb|AC084274.14| Mus musculus strain 129S6/SvEvTac clone rp22-445a10 map 16, complete sequence Length = 156624 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 40322 aaaaaccaaaccaaaacaaacaaac 40346
>gb|AC105304.24| Mus musculus strain C57BL/6J clone rp23-71k5 map 17, complete sequence Length = 229816 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 56632 aaaaaccaaaccaaaacaaacaaac 56656
>gb|AC158778.4| Mus musculus chromosome 19, clone RP24-90P13, complete sequence Length = 167819 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 110169 aaaaaccaaaccaaaacaaacaaac 110145
>gb|AC135197.1| Rattus norvegicus BAC CH230-348O5 (Children's Hospital Oakland Research Institute) complete sequence Length = 176608 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 52817 aaaaaccaaaccaaaacaaacaaac 52793
>gb|BC103803.1| Mus musculus collagen and calcium binding EGF domains 1, mRNA (cDNA clone MGC:118667 IMAGE:30088062), complete cds Length = 5322 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 1786 aaaaaccaaaccaaaacaaacaaac 1762
>gb|BC043475.1| Mus musculus DDHD domain containing 1, mRNA (cDNA clone MGC:49378 IMAGE:5365658), complete cds Length = 2826 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 2729 aaaaaccaaaccaaaacaaacaaac 2705
>emb|AL590993.14| Human DNA sequence from clone RP11-450E24 on chromosome 6 Contains the part of the ESR1 gene for estrogen receptor 1 and a CpG island, complete sequence Length = 139687 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 138942 aaaaaccaaaccaaaccaaccaaac 138966
>emb|AL359542.13| Human DNA sequence from clone RP6-190D15 on chromosome Xq25-26.1 Contains the 3' end of the ZDHHC9 gene for zinc finger, DHHC domain containing 9 (CGI-89, ZNF379), complete sequence Length = 28858 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 26582 aaaaaccaaaccaaaacaaacaaac 26558
>emb|AL353804.22| Human DNA sequence from clone RP13-216E22 on chromosome Xq13.1-21.1 Note the TSIX gene (see AmJHumGenet 69, 951) is known to overlap the XIST locus however this transcript has not been submitted to the databases and therefore it is not possible at this stage to annotate the locus, complete sequence Length = 167668 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaaccaaa 140 |||||||||||| |||||||||||| Sbjct: 121859 taaaaaccaaacaaaaacaaccaaa 121883
>emb|AL353683.7| Human DNA sequence from clone RP11-450P11 on chromosome 9 Contains part of the 5' UTR of a novel gene (FLJ31810), complete sequence Length = 198463 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 accccctcttctctccctctc 28 ||||||||||||||||||||| Sbjct: 10412 accccctcttctctccctctc 10392
>emb|AL159974.21| Human DNA sequence from clone RP11-255E21 on chromosome 13 Contains the 3' end of the C13orf10 gene for chromosome 13 open reading frame 10, complete sequence Length = 165326 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 40868 aaaaaccaaaccaaaacaacc 40848
>emb|AL161421.11| Human DNA sequence from clone RP11-156K23 on chromosome 13 Contains the 5' end of a novel gene (containd FLJ31509 and KIAA0970), a RAD17 homolog (S. pombe) pseudogene and a CpG island, complete sequence Length = 151445 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gtaaaaaccaaaccaaaacaa 135 ||||||||||||||||||||| Sbjct: 44511 gtaaaaaccaaaccaaaacaa 44491
>emb|AL136365.9| Human DNA sequence from clone RP11-143M15 on chromosome 9p23-24.3 Contains the DMRT1 gene for doublesex and mab-3 related transcription factor 1, the DMRT3 gene for doublesex and mab-3 related transcription factor 3 and four CpG islands, complete sequence Length = 179006 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 72685 aaaaaccaaaccaaaacaaacaaac 72661
>gb|AY319479.1| Brassica napus phosphoethanolamine N-methyltransferase mRNA, complete cds Length = 1750 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 444 gacttcatcgacagcgtcatcaagaagaa 472 |||||||| || ||||||||||||||||| Sbjct: 491 gacttcattgatagcgtcatcaagaagaa 519
>emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A17 on chromosome 22q13.2-13.33, complete sequence Length = 105104 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 40081 aaaaaccaaaccaaaacaaacaaac 40105
>emb|AL049821.6|HSDJ63I5 Human DNA sequence from clone RP1-63I5 on chromosome 6q25.1-26 Contains part of the ESR1 gene for estrogen receptor 1, complete sequence Length = 87705 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 1255 aaaaaccaaaccaaaccaaccaaac 1279
>emb|AL031296.1|HS888M10 Human DNA sequence from clone RP5-888M10 on chromosome 1p36.11-36.31 Contains the 3' end of the VPS13D gene for vacuolar protein sorting 13D (yeast) and a novel gene, complete sequence Length = 124874 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 118345 aaaaaccaaaccaaaccaaccaaac 118321
>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence Length = 175716 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 165294 aaaaaccaaaccaaaccaaccaaac 165318
>emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in linkage group 18, complete sequence Length = 200732 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 78927 aaaaaccaaaccaaaacaaacaaac 78903
>gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, complete sequence Length = 152934 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 96085 aaaaaccaaaccaaaccaaccaaac 96061
>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete Sequence, complete sequence Length = 220143 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 57060 aaaaaccaaaccaaaacaacc 57040
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 205078 aaaaaccaaaccaaaccaaccaaac 205102
>gb|AC154318.3| Mus musculus BAC clone RP23-316D19 from chromosome 12, complete sequence Length = 176391 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gtaaaaaccaaaccaaaacaa 135 ||||||||||||||||||||| Sbjct: 76711 gtaaaaaccaaaccaaaacaa 76691
>gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosome 14, complete sequence Length = 197531 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 45683 aaaaaccaaaccaaaccaaccaaac 45659
>emb|AL845484.9| Mouse DNA sequence from clone RP23-336L14 on chromosome 11 Contains the 3' end of the Sez6 gene for seizure related gene 6, complete sequence Length = 47702 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 47331 aaaaaccaaaccaaaccaaccaaac 47307
>emb|AL732570.12| Mouse DNA sequence from clone RP23-464J2 on chromosome 11 Contains the gene for a novel protein (C630032K07Rik), a novel gene, the 3' end of the gene for a novel protein (1700019F09Rik) and a CpG island, complete sequence Length = 102563 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 |||||||||||||||||||| |||| Sbjct: 54100 aaaaaccaaaccaaaacaacaaaac 54124
>emb|AL672160.11| Mouse DNA sequence from clone RP23-144K18 on chromosome 4, complete sequence Length = 146373 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 145629 aaaaaccaaaccaaaccaaccaaac 145605
>emb|AL731800.11| Mouse DNA sequence from clone RP23-358E7 on chromosome 11 Contains the gene for a novel protein, complete sequence Length = 204888 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 190479 aaaaaccaaaccaaaccaaccaaac 190503
>emb|AL645747.11| Mouse DNA sequence from clone RP23-436D9 on chromosome 11 Contains a novel gene and a signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam) pseudogene, complete sequence Length = 172052 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 18602 aaaaaccaaaccaaaacaaacaaac 18626
>emb|AL662910.6| Mouse DNA sequence from clone RP23-351G6 on chromosome 11 Contains the 3' end of the Tbx2 gene for T-box 2 and a novel gene, complete sequence Length = 33419 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 26422 aaaaaccaaaccaaaacaaacaaac 26398
>emb|AL669840.5| Mouse DNA sequence from clone RP23-43J1 on chromosome 11, complete sequence Length = 103555 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 1629 aaaaaccaaaccaaaccaaccaaac 1605
>gb|AC108727.6| Homo sapiens 3 BAC RP11-231L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155898 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 cccctcttctctccctctctt 30 ||||||||||||||||||||| Sbjct: 36694 cccctcttctctccctctctt 36674
>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete sequence Length = 199961 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 aaaaccaaaccaaaacaaccaaacc 142 ||||||||||||||||||| ||||| Sbjct: 53829 aaaaccaaaccaaaacaacaaaacc 53805
>emb|AL590380.9| Mouse DNA sequence from clone RP23-146D23 on chromosome 2, complete sequence Length = 197008 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 aaaaccaaaccaaaacaaccaaacc 142 |||||||||||||| |||||||||| Sbjct: 16764 aaaaccaaaccaaaccaaccaaacc 16788
>emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chromosome 3 Contains a Saccharomyces cerevisiae Nip7p homolog (pEachy) homolog pseudogene, a tumor protein translationally-controlled 1 (Tpt1) pseudogene, a high mobility group box 2 (Hmgb2) pseudogene and the Cd2 gene for CD2 antigen, complete sequence Length = 169010 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 124174 aaaaaccaaaccaaaacaacc 124154
>gb|AC157542.11| Mus musculus chromosome 1, clone RP23-115I1, complete sequence Length = 211677 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaac 136 ||||||||||||||||||||| Sbjct: 123186 taaaaaccaaaccaaaacaac 123206
>emb|AL607131.15| Mouse DNA sequence from clone RP23-372H19 on chromosome 13 Contains the Agtr1a gene for angiotensin receptor 1a, a novel pseudogene and a CpG island, complete sequence Length = 172871 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 131210 aaaaaccaaaccaaaacaaacaaac 131186
>gb|AC101986.10| Mus musculus chromosome 7, clone RP24-353K18, complete sequence Length = 187803 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 aaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||| Sbjct: 16067 aaaccaaaccaaaacaaccaa 16087
>gb|AC158574.6| Mus musculus chromosome 7, clone RP24-275O6, complete sequence Length = 160525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 aaaccaaaccaaaacaaccaa 139 ||||||||||||||||||||| Sbjct: 68343 aaaccaaaccaaaacaaccaa 68323
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ccccctcttctctccctctct 29 ||||||||||||||||||||| Sbjct: 145866 ccccctcttctctccctctct 145846
>gb|AC104982.7| Homo sapiens chromosome 17, clone RP11-338L22, complete sequence Length = 164107 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 91679 aaaaaccaaaccaaaacaaacaaac 91703
>dbj|AK098211.1| Homo sapiens cDNA FLJ40892 fis, clone UTERU2001281, highly similar to Homo sapiens mRNA for neurexin II Length = 2344 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaac 136 ||||||||||||||||||||| Sbjct: 6 taaaaaccaaaccaaaacaac 26
>gb|AC090578.6| Homo sapiens chromosome 8, clone RP11-642C5, complete sequence Length = 187209 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 103288 aaaaaccaaaccaaaacaaacaaac 103312
>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence Length = 187364 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 48447 aaaaaccaaaccaaaacaaacaaac 48423
>gb|AC092278.3| Homo sapiens chromosome 5 clone CTD-2012B7, complete sequence Length = 123469 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 99112 aaaaaccaaaccaaaacaaacaaac 99136
>gb|AC091237.6| Mus musculus Strain C57BL7/J Chromosome 14 RP23-470F15, complete sequence Length = 177104 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 2572 aaaaaccaaaccaaaacaaacaaac 2596
>gb|AC090869.7| Mus Musculus Chromosome 14 RP23-413P13, complete sequence Length = 184810 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 121055 aaaaaccaaaccaaaacaaacaaac 121079
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ccccctcttctctccctctct 29 ||||||||||||||||||||| Sbjct: 2976214 ccccctcttctctccctctct 2976194
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 411 ctggccaaggaggccggccacgtcatcgcgctg 443 |||||||| ||| ||||||||||||||||||| Sbjct: 775801 ctggccaacaaggtcggccacgtcatcgcgctg 775833
>gb|AC110775.3| Homo sapiens BAC clone RP11-290O12 from 4, complete sequence Length = 210300 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 tcttccttccttccaaacaaa 65 ||||||||||||||||||||| Sbjct: 1308 tcttccttccttccaaacaaa 1288
>dbj|AK133601.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330413D18 product:hypothetical protein, full insert sequence Length = 2834 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaacc 137 ||||||||||||||||||||| Sbjct: 2263 aaaaaccaaaccaaaacaacc 2243
>gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, complete sequence Length = 143034 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 141908 aaaaaccaaaccaaaacaaacaaac 141932
>gb|AC097638.2| Homo sapiens chromosome 3 clone RP11-353H3, complete sequence Length = 170330 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 113038 aaaaaccaaaccaaaacaaacaaac 113014
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ccccctcttctctccctctct 29 ||||||||||||||||||||| Sbjct: 141295 ccccctcttctctccctctct 141315
>dbj|AK155294.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630215O16 product:Probable phospholipase DDHD1 (EC 3.1.1.-) (DDHD domain protein 1) (Phosphatidic acid-preferring phospholipase A1 homolog) (PA-PLA1), full insert sequence Length = 3580 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 3507 aaaaaccaaaccaaaacaaacaaac 3483
>gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome 12, complete sequence Length = 198927 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 102825 aaaaaccaaaccaaaacaaacaaac 102801
>dbj|AK162749.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130022D03 product:unclassifiable, full insert sequence Length = 4171 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 3872 aaaaaccaaaccaaaccaaccaaac 3848
>dbj|AK170472.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630104O08 product:solute carrier family 16 (monocarboxylic acid transporters), member 6, full insert sequence Length = 2196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 aaaccaaaacaaccaaacctt 144 ||||||||||||||||||||| Sbjct: 1975 aaaccaaaacaaccaaacctt 1995
>gb|AC159982.4| Mus musculus chromosome 19, clone RP24-383P9, complete sequence Length = 198886 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 24100 aaaaaccaaaccaaaacaaacaaac 24124
>dbj|AK146451.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920003M13 product:hypothetical Zn-finger, RING/Zinc finger RING-type profile containing protein, full insert sequence Length = 2033 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||||||| ||||| Sbjct: 1549 aaaaaccaaaccaaaacaaacaaac 1525
>gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosome 10, complete sequence Length = 206712 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 87306 aaaaaccaaaccaaaccaaccaaac 87282
>gb|AC154606.2| Mus musculus BAC clone RP23-252E10 from chromosome 16, complete sequence Length = 181697 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 aaaaaccaaaccaaaacaaccaaac 141 ||||||||||||||| ||||||||| Sbjct: 35761 aaaaaccaaaccaaaccaaccaaac 35737
>gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosome 9, complete sequence Length = 195151 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 taaaaaccaaaccaaaacaac 136 ||||||||||||||||||||| Sbjct: 81814 taaaaaccaaaccaaaacaac 81834 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,615,338 Number of Sequences: 3902068 Number of extensions: 5615338 Number of successful extensions: 221536 Number of sequences better than 10.0: 865 Number of HSP's better than 10.0 without gapping: 868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 216078 Number of HSP's gapped (non-prelim): 5455 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
