ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9f23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 1189 bits (600), Expect = 0.0 Identities = 622/628 (99%), Gaps = 1/628 (0%) Strand = Plus / Plus Query: 1 tgttgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgaccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 tgttgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgaccc 103 Query: 61 aggnacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaag 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 agg-acttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaag 162 Query: 121 accggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagc 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 163 accggcgtcggcgcgggggacttctactaccacggtctcgccgccgcgggcaacaccagc 222 Query: 181 aacctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacggg 240 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 aacctcatcaaggcggtcgtaaccccggccttcgtcggccagttccccggcgtgaacggg 282 Query: 241 ctcggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacc 300 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ctcggcatctccgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacc 342 Query: 301 cacccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatc 360 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 343 cacccggccgcctctgagctcctcttcgtcaccgagggcaccatcttggcgggcttcatc 402 Query: 361 agctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 agctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttc 462 Query: 421 ccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgtt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgtt 522 Query: 481 gcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaac 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 gcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaac 582 Query: 541 ctgccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctc 600 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 ctgccatccgccgtcgttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctc 642 Query: 601 aagtccgtgctcggcggcagcggctaat 628 |||||||||||||||||||||||||||| Sbjct: 643 aagtccgtgctcggcggcagcggctaat 670
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 1179 bits (595), Expect = 0.0 Identities = 620/627 (98%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 1 tgttgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgaccc 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tgttgctccctgtcctcgtctccttcctcgtcctgcccttctccgccatggccctgaccc 73 Query: 61 aggnacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaag 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 agg-acttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaag 132 Query: 121 accggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 accggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagc 192 Query: 181 aacctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 aacctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacggg 252 Query: 241 ctcggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ctcggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacc 312 Query: 301 cacccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatc 360 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 313 cacccggccgcctctgagctcctcttcgtcactgagggcaccatcttggcgggcttcatc 372 Query: 361 agctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 agctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttc 432 Query: 421 ccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgtt 480 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 433 ccccagggcctgctccactaccagtacaacggtggcagctcctccgcggtagcgctcgtt 492 Query: 481 gcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaac 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 gcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaac 552 Query: 541 ctgccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctc 600 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 ctgccatccgccgtcgttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctc 612 Query: 601 aagtccgtgctcggcggcagcggctaa 627 ||||||||||||||||||||||||||| Sbjct: 613 aagtccgtgctcggcggcagcggctaa 639
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 997 bits (503), Expect = 0.0 Identities = 597/627 (95%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 1 tgttgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgaccc 60 |||||||||| || |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 17 tgttgctccccgtgctcatctccttccttatcatgcccttctccgccatggccctgaccc 76 Query: 61 aggnacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaag 120 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 77 agg-acttctgcgtcgccgacctgtcctgcagcgacacaccggcggggtacccgtgcaag 135 Query: 121 accggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagc 180 |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 gccggcgtcagcgcaggggacttctactaccacggcctcgccgccgcgggcaacaccagc 195 Query: 181 aacctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacggg 240 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 196 aacctcatcaaggcggccgtgaccccggccttcgtcgggcagttccccggcgtgaacggg 255 Query: 241 ctcggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacc 300 ||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 256 ctcggcatctccgcagcgaggctcgacatcgccatgggcggcgtcgtgccgctgcacacc 315 Query: 301 cacccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatc 360 ||||||||||||||||||||||| || || ||||||||||||||| |||||||||||||| Sbjct: 316 cacccggccgcctctgagctcctgtttgtcaccgagggcaccatcctggcgggcttcatc 375 Query: 361 agctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttc 420 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 376 agctcctcctccaacaccgtgtacaccaagacactctacaagggcgacatcatggtgttc 435 Query: 421 ccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgtt 480 |||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||| Sbjct: 436 ccccagggcctgctccactaccagtacaacggcggcggctcggcagcggtggcgctcgtt 495 Query: 481 gcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaac 540 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 496 gcgttcagcggccccaaccccggcctgcagatcactgactacgcgctcttcgccaacaac 555 Query: 541 ctgccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctc 600 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 ctgccgtccgccgtcgttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctc 615 Query: 601 aagtccgtgctcggcggcagcggctaa 627 ||||||||||||||||||||||||||| Sbjct: 616 aagtccgtgctcggcggcagcggctaa 642
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 706 bits (356), Expect = 0.0 Identities = 555/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 123 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 182 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 183 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 241 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 242 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 301 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 ctcatcaaggccgccgtgaccccggccttcgtcggccagttccccggcgtgaacgggctc 361 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 362 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 421 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 422 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 481 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 482 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 541 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 542 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 601 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 602 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 661 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 721 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 722 tccgtcctcggcggtagcgg 741
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 121 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 180 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 181 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 239 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 240 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 299 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 359 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 360 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 419 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 420 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 479 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 480 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 539 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 540 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 599 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 600 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 659 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 719 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 720 tccgtcctcggcggtagcgg 739
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 110 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 169 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 170 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 228 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 229 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 288 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 348 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 349 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 408 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 409 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 468 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 469 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 528 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 529 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 588 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 589 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 648 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 708 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 709 tccgtcctcggcggtagcgg 728
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Minus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 22551683 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 22551624 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 22551623 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 22551565 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 22551564 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 22551505 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 22551504 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 22551445 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 22551444 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 22551385 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 22551384 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 22551325 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 22551324 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 22551265 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 22551264 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 22551205 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 22551204 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 22551145 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22551144 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 22551085 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 22551084 tccgtcctcggcggtagcgg 22551065 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 415 gtgttcccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcg 474 |||||||| |||||||||||||||| |||||||||| ||| | | ||||||| ||| Sbjct: 22546312 gtgttcccgcagggcctgctccacttccagtacaacaccggcgacacgacggcggtggcg 22546253 Query: 475 ctcgttgcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgcc 534 ||| |||| |||| || | ||||| ||||| |||||| |||||||||||||||||| Sbjct: 22546252 ttcgcggcgtacagcagctcgaaccccggcctgcagatcctcgactacgcgctcttcgcc 22546193 Query: 535 aacaacctgcc 545 ||||||||||| Sbjct: 22546192 aacaacctgcc 22546182 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 277 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 325 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 22546450 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 22546402
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Minus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 25184 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 25125 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 25124 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 25066 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 25065 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 25006 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 25005 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 24946 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 24945 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 24886 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 24885 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 24826 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 24825 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 24766 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 24765 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 24706 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 24705 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 24646 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24645 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 24586 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 24585 tccgtcctcggcggtagcgg 24566 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 415 gtgttcccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcg 474 |||||||| |||||||||||||||| |||||||||| ||| | | ||||||| ||| Sbjct: 19813 gtgttcccgcagggcctgctccacttccagtacaacaccggcgacacgacggcggtggcg 19754 Query: 475 ctcgttgcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgcc 534 ||| |||| |||| || | ||||| ||||| |||||| |||||||||||||||||| Sbjct: 19753 ttcgcggcgtacagcagctcgaaccccggcctgcagatcctcgactacgcgctcttcgcc 19694 Query: 535 aacaacctgcc 545 ||||||||||| Sbjct: 19693 aacaacctgcc 19683 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 277 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 325 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 19951 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 19903
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Minus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 146611 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 146552 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 146551 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 146493 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 146492 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 146433 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 146432 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 146373 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 146372 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 146313 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 146312 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 146253 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 146252 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 146193 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 146192 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 146133 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 146132 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 146073 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146072 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 146013 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 146012 tccgtcctcggcggtagcgg 145993 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 415 gtgttcccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcg 474 |||||||| |||||||||||||||| |||||||||| ||| | | ||||||| ||| Sbjct: 141240 gtgttcccgcagggcctgctccacttccagtacaacaccggcgacacgacggcggtggcg 141181 Query: 475 ctcgttgcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgcc 534 ||| |||| |||| || | ||||| ||||| |||||| |||||||||||||||||| Sbjct: 141180 ttcgcggcgtacagcagctcgaaccccggcctgcagatcctcgactacgcgctcttcgcc 141121 Query: 535 aacaacctgcc 545 ||||||||||| Sbjct: 141120 aacaacctgcc 141110 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 277 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 325 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 141378 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 141330
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 121 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 180 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 181 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 239 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 240 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 299 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 359 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 360 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 419 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 420 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 479 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 480 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 539 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 540 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 599 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 600 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 659 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 719 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 720 tccgtcctcggcggtagcgg 739
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 110 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 169 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 170 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 228 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 229 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 288 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 348 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 349 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 408 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 409 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 468 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 469 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 528 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 529 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 588 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 589 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 648 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 708 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 709 tccgtcctcggcggtagcgg 728
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 20 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 79 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 80 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 138 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 139 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 198 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 199 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 258 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 259 ggtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccac 318 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 319 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 378 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 379 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 438 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 439 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 498 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 499 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 558 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 618 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 619 tccgtcctcggcggtagcgg 638
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 682 bits (344), Expect = 0.0 Identities = 552/620 (89%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 102 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 161 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 162 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 220 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 221 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 280 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 340 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||| ||| ||||||||||| ||||||||||||||| | ||||||||| Sbjct: 341 ggtatctccgcggcgaagctggacatcgccgtcggcggcgtcgtgccgctccacacccac 400 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| | |||||| || || || ||||||| | Sbjct: 401 ccggccgcctccgagctcctgttcgtcacccaaggcaccgtcgccgccgggttcatcacc 460 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 461 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 520 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| || Sbjct: 521 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcgcc 580 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 581 ttcagcggccccaaccccggcctccagatcaccgactacgccctcttcgccaacaacctg 640 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 700 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 701 tccgtcctcggcggtagcgg 720
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 650 bits (328), Expect = 0.0 Identities = 548/620 (88%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 4 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 63 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 122 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 181 Query: 64 nacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagacc 123 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 182 -atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcc 240 Query: 124 ggcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaac 183 |||||||||| || |||||| ||||||||||||||| || |||||||||||||||||| Sbjct: 241 agcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaac 300 Query: 184 ctcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctc 243 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctc 360 Query: 244 ggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccac 303 || ||||| ||||||||||| ||||||||||| || |||||||||||| | ||||||||| Sbjct: 361 ggtatctccgcggcgaggctggacatcgccgtcgggggcgtcgtgccgctccacacccac 420 Query: 304 ccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagc 363 ||||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| | Sbjct: 421 ccggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacc 480 Query: 364 tcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttcccc 423 ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 481 tcctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttcccc 540 Query: 424 cagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcgctcgttgcg 483 |||||||| || |||||||||||||||| ||| || |||||||| |||||||| | Sbjct: 541 cagggcctcctgcactaccagtacaacgccggccagtcggcggcggtggcgctcgtcggc 600 Query: 484 ttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgccaacaacctg 543 ||||||||||||||||| || || ||||| | |||||||| |||||||||||||||||| Sbjct: 601 ttcagcggccccaaccccgggcttcagattaacgactacgccctcttcgccaacaacctg 660 Query: 544 ccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 603 || |||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 ccgtccgccatcgtcgagaaggtcaccttcttggacgacgcgcaggtgaagaagctcaag 720 Query: 604 tccgtgctcggcggcagcgg 623 ||||| |||||||| ||||| Sbjct: 721 tccgtcctcggcggtagcgg 740
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 517 bits (261), Expect = e-143 Identities = 496/573 (86%), Gaps = 1/573 (0%) Strand = Plus / Plus Query: 51 gccctgacccaggnacttctgcgtcgccgacctgtcctgcagcgacacgccggcggggta 110 |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1518 gccctgacgcagg-acttctgcgtcgccgacctgacctgcagcgacacgccggcggggta 1576 Query: 111 cccgtgcaagaccggcgtcggcgcgggggacttctactaccacggcctcgccgccgcggg 170 |||||||||| || ||||| ||| |||||||||| ||||||||| |||| | ||| Sbjct: 1577 cccgtgcaagtccagcgtcaccgccaacgacttctacttccacggcctggccggccaggg 1636 Query: 171 caacaccagcaacctcatcaaggcggccgtaaccccggccttcgtcggccagttccccgg 230 ||| | | | ||||||||||| ||||| |||||||||||||| ||||||||||| || Sbjct: 1637 caaaataaacccactcatcaaggccgccgtgaccccggccttcgtgggccagttcccggg 1696 Query: 231 cgtgaacgggctcggcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgcc 290 ||| |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1697 cgtcaacgggcttggcatctctgcggccaggctcgacatcgaggtgggcggcgtcgtgcc 1756 Query: 291 gatgcacacccacccggccgcctctgagctcctcttcgtaaccgagggcaccatcttggc 350 | |||||||||||||||| | ||| |||||||||||||| ||| |||||||| || || Sbjct: 1757 gctgcacacccacccggcgggctcagagctcctcttcgtgacccagggcaccgtcgccgc 1816 Query: 351 gggcttcatcagctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacat 410 ||||||||||||||| |||||||||||| ||||||||||| || ||| |||||||| Sbjct: 1817 cggcttcatcagctccggctccaacaccgtctacaccaagacactgtacgccggcgacat 1876 Query: 411 catggtgttcccccagggcctgctccactaccagtacaacggtggcagctccgcggcggt 470 ||||||||||||||||||||||||||||||||||||||||| |||| | ||| || || Sbjct: 1877 catggtgttcccccagggcctgctccactaccagtacaacgccggcaccggcgctgccgt 1936 Query: 471 agcgctcgttgcgttcagcggccccaacccaggcctccagatcactgactacgcgctctt 530 | ||||| || |||||| |||||||||| ||||| |||||||| |||| |||||||| Sbjct: 1937 gggcctcgtcgccttcagcagccccaaccccggcctgcagatcaccgactttgcgctctt 1996 Query: 531 cgccaacaacctgccatccgccgtggttgagaaggtcaccttcttggacgacgcgcaggt 590 ||||||||||| || |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1997 tgccaacaacctcccgtccgccgtcgtggagaaggtcaccttcttggacgacgcgcaggt 2056 Query: 591 gaagaagctcaagtccgtgctcggcggcagcgg 623 ||||||||||||| ||||||||||||||||| Sbjct: 2057 gaagaagctcaagagtgtgctcggcggcagcgg 2089
>gb|AY112552.1| Zea mays CL11523_1 mRNA sequence Length = 544 Score = 143 bits (72), Expect = 8e-31 Identities = 151/179 (84%) Strand = Plus / Minus Query: 408 catcatggtgttcccccagggcctgctccactaccagtacaacggtggcagctccgcggc 467 |||||||||||| ||||||||||||||||||||||||||| |||| | ||| || Sbjct: 544 catcatggtgttnnnnnagggcctgctccactaccagtacaacgccggcaccggcgctgc 485 Query: 468 ggtagcgctcgttgcgttcagcggccccaacccaggcctccagatcactgactacgcgct 527 || | ||||| || |||||| |||||||||| ||||| |||||||| |||| ||||| Sbjct: 484 cgtgggcctcgtcgccttcagcagccccaaccccggcctgcagatcaccgactttgcgct 425 Query: 528 cttcgccaacaacctgccatccgccgtggttgagaaggtcaccttcttggacgacgcgc 586 ||| ||||||||||| || |||||||| || |||||||||||||||||||||||||||| Sbjct: 424 ctttgccaacaacctcccgtccgccgtcgtggagaaggtcaccttcttggacgacgcgc 366
>ref|XM_482785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 415 gtgttcccccagggcctgctccactaccagtacaacggtggcagctccgcggcggtagcg 474 |||||||| |||||||||||||||| |||||||||| ||| | | ||||||| ||| Sbjct: 448 gtgttcccgcagggcctgctccacttccagtacaacaccggcgacacgacggcggtggcg 507 Query: 475 ctcgttgcgttcagcggccccaacccaggcctccagatcactgactacgcgctcttcgcc 534 ||| |||| |||| || | ||||| ||||| |||||| |||||||||||||||||| Sbjct: 508 ttcgcggcgtacagcagctcgaaccccggcctgcagatcctcgactacgcgctcttcgcc 567 Query: 535 aacaacctgcc 545 ||||||||||| Sbjct: 568 aacaacctgcc 578 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 277 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 325 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 310 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 358
>ref|XM_471594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 49 tggccctgacccaggnacttctgcgtcgccgacctgtcctgcagcgacacgccggcgggg 108 ||||||||| ||||| |||||||||||| ||||||| || || ||||||||||||| || Sbjct: 62 tggccctgaaccagg-acttctgcgtcggcgacctggcccgcggcgacacgccggccggc 120 Query: 109 tacccgtgcaag 120 |||||||||||| Sbjct: 121 tacccgtgcaag 132 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 355 ttcatcagctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatg 414 ||||||||||| | ||||||| |||||||||| |||||| |||||||||| ||||| Sbjct: 373 ttcatcagctctacatccaacaaggtgtacaccagcacgctccgcaagggcgacctcatg 432 Query: 415 gtgttccc 422 |||||||| Sbjct: 433 gtgttccc 440 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 508 cagatcactgactacgcgctcttcgccaacaacct 542 ||||||| |||| ||||||||||||||||||||| Sbjct: 547 cagatcatggacttcgcgctcttcgccaacaacct 581
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03, complete sequence Length = 144146 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 49 tggccctgacccaggnacttctgcgtcgccgacctgtcctgcagcgacacgccggcgggg 108 ||||||||| ||||| |||||||||||| ||||||| || || ||||||||||||| || Sbjct: 37464 tggccctgaaccagg-acttctgcgtcggcgacctggcccgcggcgacacgccggccggc 37522 Query: 109 tacccgtgcaag 120 |||||||||||| Sbjct: 37523 tacccgtgcaag 37534 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 355 ttcatcagctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatg 414 ||||||||||| | ||||||| |||||||||| |||||| |||||||||| ||||| Sbjct: 37976 ttcatcagctctacatccaacaaggtgtacaccagcacgctccgcaagggcgacctcatg 38035 Query: 415 gtgttccc 422 |||||||| Sbjct: 38036 gtgttccc 38043 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 508 cagatcactgactacgcgctcttcgccaacaacct 542 ||||||| |||| ||||||||||||||||||||| Sbjct: 38150 cagatcatggacttcgcgctcttcgccaacaacct 38184
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 49 tggccctgacccaggnacttctgcgtcgccgacctgtcctgcagcgacacgccggcgggg 108 ||||||||| ||||| |||||||||||| ||||||| || || ||||||||||||| || Sbjct: 12556761 tggccctgaaccagg-acttctgcgtcggcgacctggcccgcggcgacacgccggccggc 12556703 Query: 109 tacccgtgcaag 120 |||||||||||| Sbjct: 12556702 tacccgtgcaag 12556691 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 355 ttcatcagctcctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatg 414 ||||||||||| | ||||||| |||||||||| |||||| |||||||||| ||||| Sbjct: 12556249 ttcatcagctctacatccaacaaggtgtacaccagcacgctccgcaagggcgacctcatg 12556190 Query: 415 gtgttccc 422 |||||||| Sbjct: 12556189 gtgttccc 12556182 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 508 cagatcactgactacgcgctcttcgccaacaacct 542 ||||||| |||| ||||||||||||||||||||| Sbjct: 12556075 cagatcatggacttcgcgctcttcgccaacaacct 12556041
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 cggcctcgccgccgcgggcaaca 175 ||||||||||||||||||||||| Sbjct: 2543186 cggcctcgccgccgcgggcaaca 2543208
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 cggcctcgccgccgcgggcaaca 175 ||||||||||||||||||||||| Sbjct: 3495737 cggcctcgccgccgcgggcaaca 3495759
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 153 cggcctcgccgccgcgggcaaca 175 ||||||||||||||||||||||| Sbjct: 1370699 cggcctcgccgccgcgggcaaca 1370677 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 acgacgcgcaggtgaagaag 597 |||||||||||||||||||| Sbjct: 2421499 acgacgcgcaggtgaagaag 2421518
>gb|AC007242.3| Homo sapiens BAC clone RP11-182H9 from 2, complete sequence Length = 112748 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctccctgtcctcatctccttcc 27 |||||||||||||||||||||| Sbjct: 68375 ctccctgtcctcatctccttcc 68354
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 597 gctcaagtccgtgctcggcggcagcg 622 ||||||| |||||||||||||||||| Sbjct: 7137020 gctcaaggccgtgctcggcggcagcg 7136995
>gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome Length = 44373 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 cgacgcgcaggtgaagaagct 599 ||||||||||||||||||||| Sbjct: 10638 cgacgcgcaggtgaagaagct 10658
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel gene, the FOXP4 gene for forkhead box P4 and five CpG islands, complete sequence Length = 180547 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 gccgcctctgagctcctcttc 327 ||||||||||||||||||||| Sbjct: 166376 gccgcctctgagctcctcttc 166396
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24 Length = 314450 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 394 ctctacaagggcgacatcatggtgt 418 |||||||||||| |||||||||||| Sbjct: 172615 ctctacaagggcaacatcatggtgt 172639
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 576 ggacgacgcgcaggtgaagaagctc 600 |||||||||| |||||||||||||| Sbjct: 305507 ggacgacgcgaaggtgaagaagctc 305483
>gb|BC101772.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126821 IMAGE:8069278), complete cds Length = 3675 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1224 cttcatcagctcctcctcca 1205
>gb|BC101774.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126823 IMAGE:8069280), complete cds Length = 3675 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1224 cttcatcagctcctcctcca 1205
>ref|NM_183572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cagctcctcctccaacaccg 379 |||||||||||||||||||| Sbjct: 768 cagctcctcctccaacaccg 787
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tcccccagggcctgctccac 438 |||||||||||||||||||| Sbjct: 1620032 tcccccagggcctgctccac 1620051
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 agctcctcctccaacaccgt 380 |||||||||||||||||||| Sbjct: 2064376 agctcctcctccaacaccgt 2064395
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 acgacgcgcaggtgaagaag 597 |||||||||||||||||||| Sbjct: 2254734 acgacgcgcaggtgaagaag 2254715
>ref|XM_515467.1| PREDICTED: Pan troglodytes LOC459223 (LOC459223), mRNA Length = 3820 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1267 cttcatcagctcctcctcca 1248
>ref|NM_172311.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor (SALF), mRNA Length = 3824 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1311 cttcatcagctcctcctcca 1292
>gb|AC125255.15| Mus musculus chromosome 5, clone RP24-332C17, complete sequence Length = 173258 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctgtcctcatctccttcctc 29 |||||||||||||||||||| Sbjct: 43657 ctgtcctcatctccttcctc 43676
>gb|AY441676.1| Galago senegalensis SINE element Mad3 Length = 528 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 acaccaagacgctctacaagggcgacat 410 |||||| | ||||||||||||||||||| Sbjct: 304 acaccagggcgctctacaagggcgacat 331
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 197507 ccccaacccaggcctccaga 197488
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 77567 ccccaacccaggcctccaga 77548
>gb|AY424891.1| Toxoplasma gondii UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase T2 gene, complete cds Length = 10000 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 cttcctcgtcctgcccttctccgc 46 |||||||||||||||| ||||||| Sbjct: 8749 cttcctcgtcctgcccctctccgc 8726
>gb|AY136814.1| Toxoplasma gondii UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase T2 mRNA, complete cds Length = 2079 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 cttcctcgtcctgcccttctccgc 46 |||||||||||||||| ||||||| Sbjct: 1921 cttcctcgtcctgcccctctccgc 1898
>ref|XR_002034.1| PREDICTED: Mus musculus similar to Cytochrome P450 XXI (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) (LOC632302), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 898 ccccaacccaggcctccaga 917
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 tcagctcctcctccaacaccgtgt 382 ||||||||||||||| |||||||| Sbjct: 172484 tcagctcctcctccagcaccgtgt 172507
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ccgtgctcggcggcagcggc 624 |||||||||||||||||||| Sbjct: 2457712 ccgtgctcggcggcagcggc 2457731
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcttcatcagctcctcctcc 372 |||||||||||||||||||| Sbjct: 2528913 gcttcatcagctcctcctcc 2528932
>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence Length = 205684 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 tcagctcctcctccaacaccgtgt 382 |||||| ||||||||||||||||| Sbjct: 72857 tcagctactcctccaacaccgtgt 72880
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 tcagctcctcctccaacaccgtgt 382 ||||||||| |||||||||||||| Sbjct: 172232 tcagctccttctccaacaccgtgt 172255
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence Length = 178746 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacaccgtgt 382 ||||||||| |||||||||||||| Sbjct: 138414 tcagctccttctccaacaccgtgt 138391
>ref|NM_013137.1| Rattus norvegicus discoidin domain receptor family, member 1 (Ddr1), mRNA Length = 2733 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 1369 tcagctcctcctccaacacc 1350
>emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromosome Xq21, complete sequence Length = 129249 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 tctccttcctcgtcctgcccttct 42 ||||||||||| |||||||||||| Sbjct: 59426 tctccttcctcctcctgcccttct 59449
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 63450 tcagctcctcctccaacacc 63469
>emb|AL137793.16| Human DNA sequence from clone RP5-1065P14 on chromosome 1q41-42.2 Contains a novel pseudogene and a novel gene, complete sequence Length = 138419 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 cccggccgcctctgagctcc 322 |||||||||||||||||||| Sbjct: 114020 cccggccgcctctgagctcc 114001
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 cccggccttcgtcggccagttccccggc 231 ||||||||||| |||||| ||||||||| Sbjct: 4472214 cccggccttcgccggccatttccccggc 4472241
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 265279 tcagctcctcctccaacacc 265298
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcgccgccgcgggcaacacc 177 |||||||||||||||||||| Sbjct: 134930 tcgccgccgcgggcaacacc 134911
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 acttctgcgtcgccgacctg 84 |||||||||||||||||||| Sbjct: 89 acttctgcgtcgccgacctg 108
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 acttctgcgtcgccgacctg 84 |||||||||||||||||||| Sbjct: 89 acttctgcgtcgccgacctg 108
>emb|CR936807.1| Homo sapiens mRNA; cDNA DKFZp781K2462 (from clone DKFZp781K2462) Length = 5620 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1392 cttcatcagctcctcctcca 1373
>emb|CR859409.1| Pongo pygmaeus mRNA; cDNA DKFZp469K176 (from clone DKFZp469K176) Length = 5526 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1287 cttcatcagctcctcctcca 1268
>gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of the complete genome Length = 11137 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gctcgacatcgccgtgggcg 280 |||||||||||||||||||| Sbjct: 2330 gctcgacatcgccgtgggcg 2311
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 66588 ccccaacccaggcctccaga 66569
>dbj|AK146565.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920026N02 product:cytochrome P450, family 21, subfamily a, polypeptide 1, full insert sequence Length = 2053 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 803 ccccaacccaggcctccaga 822
>ref|NM_006873.2| Homo sapiens stonin 1 (STON1), mRNA Length = 5822 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1207 cttcatcagctcctcctcca 1188
>gb|S77556.1| Ptk-3S=radiation-induced gene {alternatively spliced} [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 549 nt] Length = 549 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 169 tcagctcctcctccaacacc 150
>gb|S77585.1| Ptk-3L=radiation-induced gene [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 660 nt] Length = 660 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 169 tcagctcctcctccaacacc 150
>gb|AC154448.2| Mus musculus BAC clone RP23-185F24 from chromosome 16, complete sequence Length = 203269 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 181384 tcagctcctcctccaacacc 181403
>gb|AF255310.1|AF255310 Homo sapiens stonin 1 mRNA, complete cds Length = 2509 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1207 cttcatcagctcctcctcca 1188
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cacccacccggccgcctctg 316 |||||||||||||||||||| Sbjct: 21271687 cacccacccggccgcctctg 21271706 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cagctcctcctccaacaccg 379 |||||||||||||||||||| Sbjct: 10365254 cagctcctcctccaacaccg 10365273
>gb|AY613781.1| Mus musculus strain C57BL/10J truncated steroid 21-hydroxylase (Cyp21a1) gene, complete cds Length = 3261 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 1492 ccccaacccaggcctccaga 1511
>gb|AY026319.1| Homo sapiens stoned B-like factor SBLF (SBLF) mRNA, complete cds Length = 2208 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1197 cttcatcagctcctcctcca 1178
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 ggccccaacccaggcctcca 509 |||||||||||||||||||| Sbjct: 10515 ggccccaacccaggcctcca 10496
>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence Length = 176299 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 153415 tcagctcctcctccaacacc 153396
>gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, complete sequence Length = 177047 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 122668 cttcatcagctcctcctcca 122687
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cggcgtgaacgggctcggca 247 |||||||||||||||||||| Sbjct: 70720 cggcgtgaacgggctcggca 70701
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cagctcctcctccaacaccg 379 |||||||||||||||||||| Sbjct: 10214 cagctcctcctccaacaccg 10233
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cacccacccggccgcctctg 316 |||||||||||||||||||| Sbjct: 169196 cacccacccggccgcctctg 169215
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tcgtcggccagttccccggc 231 |||||||||||||||||||| Sbjct: 6983636 tcgtcggccagttccccggc 6983655
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cagctcctcctccaacaccg 379 |||||||||||||||||||| Sbjct: 71974 cagctcctcctccaacaccg 71993
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 246749 tcagctcctcctccaacacc 246730
>gb|DQ341430.1| Lynx lynx steroid 21-hydroxylase gene, complete cds Length = 2955 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 1316 ccccaacccaggcctccaga 1335
>emb|Z84816.1|HS2A2B Human DNA sequence from PAC 2A2 on chromosome X contains ESTs Length = 96355 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 tctccttcctcgtcctgcccttct 42 ||||||||||| |||||||||||| Sbjct: 36930 tctccttcctcctcctgcccttct 36907
>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence Length = 173474 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ccttctccgccatggccctg 56 |||||||||||||||||||| Sbjct: 114913 ccttctccgccatggccctg 114932
>gb|AF026169.1|AF026169 Homo sapiens SALF (SALF) mRNA, complete cds Length = 3824 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcatcagctcctcctcca 373 |||||||||||||||||||| Sbjct: 1311 cttcatcagctcctcctcca 1292
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 197528 ccccaacccaggcctccaga 197509
>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete sequence Length = 171682 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 31094 ccccaacccaggcctccaga 31075
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 59117 ccccaacccaggcctccaga 59098
>ref|NM_009995.1| Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1 (Cyp21a1), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 639 ccccaacccaggcctccaga 658
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcttcatcagctcctcctcc 372 |||||||||||||||||||| Sbjct: 111960 gcttcatcagctcctcctcc 111941
>emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence Length = 220201 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 99872 tcagctcctcctccaacacc 99853
>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete sequence Length = 195413 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 64819 tcagctcctcctccaacacc 64838
>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21) genes, complete cds Length = 26307 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 24339 ccccaacccaggcctccaga 24358
>gb|M73820.1|MUSSLPSEXA Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome P-450 (Cyp21(w7A)) gene, exons 1-7 Length = 12544 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 12110 ccccaacccaggcctccaga 12129
>gb|M15008.1|MUS21OHA2 Mouse steroid 21-hydroxylase B (21-OHase B) gene, complete cds Length = 3163 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 1273 ccccaacccaggcctccaga 1292
>gb|M15009.1|MUS21OHA1 Mouse steroid 21-hydroxylase A (21-OHase A) gene, complete cds Length = 3307 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccccaacccaggcctccaga 511 |||||||||||||||||||| Sbjct: 1497 ccccaacccaggcctccaga 1516
>gb|L26525.1|RATPTK3D Rattus norvegicus tyrosine kinase receptor (Ptk-3) gene, complete cds Length = 3743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagctcctcctccaacacc 378 |||||||||||||||||||| Sbjct: 1546 tcagctcctcctccaacacc 1527 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,346,405 Number of Sequences: 3902068 Number of extensions: 4346405 Number of successful extensions: 106614 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104763 Number of HSP's gapped (non-prelim): 1815 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
