Clone Information

BLAST Search Result

Clone Name	bags9e06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (...	155	1e-37
2	PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC...	145	1e-34
3	PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransf...	142	5e-34
4	PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransf...	135	7e-32
5	KSGA_GEOSL (Q74C12) Dimethyladenosine transferase (EC 2.1.1.-) (...	36	0.063
6	KSGA_METTH (O27381) Probable dimethyladenosine transferase (EC 2...	36	0.083
7	Y912_HAEIN (P44074) Hypothetical protein HI0912	35	0.11
8	ERMJ_BACAN (Q04720) rRNA adenine N-6-methyltransferase (EC 2.1.1...	35	0.18
9	ERMD_BACLI (Q03986) rRNA adenine N-6-methyltransferase (EC 2.1.1...	35	0.18
10	KSGA_METMA (Q8PU18) Probable dimethyladenosine transferase (EC 2...	34	0.31
11	UBIG_XYLFT (Q87BG5) 3-demethylubiquinone-9 3-methyltransferase (...	33	0.41
12	KSGA_METAC (Q8TQU8) Probable dimethyladenosine transferase (EC 2...	33	0.41
13	RUMA_METCA (Q606W5) 23S rRNA (uracil-5-)-methyltransferase rumA ...	33	0.54
14	KSGA_DESPS (Q6AL71) Dimethyladenosine transferase (EC 2.1.1.-) (...	33	0.54
15	RUMA_VIBF1 (Q5E320) 23S rRNA (uracil-5-)-methyltransferase rumA ...	33	0.54
16	KSGA_ONYPE (Q6YPJ4) Dimethyladenosine transferase (EC 2.1.1.-) (...	33	0.70
17	RUMA_HAEDU (Q7VKU9) 23S rRNA (uracil-5-)-methyltransferase rumA ...	33	0.70
18	KSGA_PYRKO (Q5JI54) Probable dimethyladenosine transferase (EC 2...	32	1.2
19	BCHM_RHOCA (P26236) Magnesium-protoporphyrin O-methyltransferase...	32	1.2
20	KSGA_CHLCV (Q823V2) Dimethyladenosine transferase (EC 2.1.1.-) (...	32	1.2
21	MDG1_YEAST (P53885) Signal transduction protein MDG1 (Multicopy ...	32	1.6
22	KSGA_PYRFU (Q8TH24) Probable dimethyladenosine transferase (EC 2...	32	1.6
23	ERMK_BACLI (P45438) rRNA adenine N-6-methyltransferase (EC 2.1.1...	32	1.6
24	KSGA_LACPL (Q88Z93) Dimethyladenosine transferase (EC 2.1.1.-) (...	32	1.6
25	KSGA_THEMA (Q9X1F1) Dimethyladenosine transferase (EC 2.1.1.-) (...	31	2.0
26	KSGA_CLOPE (Q8XHG8) Dimethyladenosine transferase (EC 2.1.1.-) (...	31	2.0
27	KSGA_STRA5 (Q8DXR8) Dimethyladenosine transferase (EC 2.1.1.-) (...	31	2.0
28	KSGA_STRA3 (Q8E3D7) Dimethyladenosine transferase (EC 2.1.1.-) (...	31	2.0
29	CBIT_METJA (Q57836) Probable cobalt-precorrin-6Y C(15)-methyltra...	31	2.0
30	RUMA_PHOPR (Q6LMS7) 23S rRNA (uracil-5-)-methyltransferase rumA ...	31	2.0
31	PIMT1_METAC (Q8TT93) Protein-L-isoaspartate O-methyltransferase ...	31	2.0
32	UBIG_XYLFA (Q9PAM5) 3-demethylubiquinone-9 3-methyltransferase (...	31	2.7
33	TRMB_THET8 (Q5SHW1) tRNA (guanine-N(7)-)-methyltransferase (EC 2...	31	2.7
34	TRMB_THET2 (Q72I77) tRNA (guanine-N(7)-)-methyltransferase (EC 2...	31	2.7
35	KSGA_PYRHO (O59487) Probable dimethyladenosine transferase (EC 2...	31	2.7
36	ERMG_BACSH (P06571) rRNA adenine N-6-methyltransferase (EC 2.1.1...	31	2.7
37	Y1863_LISIN (Q92AQ7) Hypothetical RNA methyltransferase lin1863 ...	30	3.5
38	Y1145_PYRAB (Q9UZK1) Hypothetical RNA methyltransferase PYRAB114...	30	3.5
39	KSGA_LISMO (Q8YAE2) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	3.5
40	KSGA_LISMF (Q724M5) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	3.5
41	KSGA_LISIN (Q92F79) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	3.5
42	KSGA_ENTFA (Q837A7) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	3.5
43	Y3374_MYCBO (P65349) Putative methyltransferase Mb3374 (EC 2.1.1.-)	30	3.5
44	Y3342_MYCTU (P65348) Putative methyltransferase Rv3342/MT3445 (E...	30	3.5
45	KSGA_AZOSE (Q5P7J1) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	3.5
46	Y1435_CLOAB (Q97J51) Hypothetical RNA methyltransferase CAC1435 ...	30	3.5
47	NAPA_VIBCH (Q9KLR4) Periplasmic nitrate reductase precursor (EC ...	30	3.5
48	Y1172_PYRFU (Q8U1N4) Hypothetical RNA methyltransferase PF1172 (...	30	3.5
49	RUMA_VIBCH (Q9KPC1) 23S rRNA (uracil-5-)-methyltransferase rumA ...	30	3.5
50	KSGA_LACLA (Q9CHN8) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	4.5
51	Y1776_LISMF (Q71YR7) Hypothetical RNA methyltransferase LMOf2365...	30	4.5
52	Y1751_LISMO (Q8Y6D6) Hypothetical RNA methyltransferase lmo1751 ...	30	4.5
53	UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (E...	30	4.5
54	YEFA_BACSU (O31503) Hypothetical RNA methyltransferase yefA (EC ...	30	4.5
55	NAPA1_PHOPR (Q6LTV9) Periplasmic nitrate reductase 1 precursor (...	30	4.5
56	Y1137_PYRHO (O58864) Hypothetical RNA methyltransferase PH1137 (...	30	4.5
57	RUMA_VIBPA (Q87LP5) 23S rRNA (uracil-5-)-methyltransferase rumA ...	30	4.5
58	ERMG_LACRE (Q00014) rRNA adenine N-6-methyltransferase (EC 2.1.1...	30	4.5
59	VL2_HPV49 (P36762) Minor capsid protein L2	30	4.5
60	KSGA_BACSK (Q5WLW2) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	4.5
61	CARB_STRTH (P13079) rRNA methyltransferase (EC 2.1.1.-) (Carbomy...	30	5.9
62	AEF1_DROME (P39413) Adult enhancer factor 1 (AEF-1)	30	5.9
63	PIMT2_ARCFU (O27962) Protein-L-isoaspartate O-methyltransferase ...	30	5.9
64	KSGA_TREDE (Q73NS2) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	5.9
65	NAPA_PASMU (Q9CKL8) Periplasmic nitrate reductase precursor (EC ...	30	5.9
66	KSGA_BACSU (P37468) Dimethyladenosine transferase (EC 2.1.1.-) (...	30	5.9
67	VPG_BYDVP (P09513) Putative genome-linked protein precursor (VPG...	30	5.9
68	PIMT2_METAC (Q8TT94) Protein-L-isoaspartate O-methyltransferase ...	30	5.9
69	Y2287_ARATH (O81004) GTP-binding protein At2g22870	30	5.9
70	UBIE_MICLU (O66128) Menaquinone biosynthesis methyltransferase u...	29	7.8
71	KSGA_SYMTH (Q67JB9) Dimethyladenosine transferase (EC 2.1.1.-) (...	29	7.8
72	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	29	7.8
73	KSGA_DEIRA (Q9RU68) Dimethyladenosine transferase (EC 2.1.1.-) (...	29	7.8
74	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	29	7.8
75	UBIE_LISMO (P67055) Menaquinone biosynthesis methyltransferase u...	29	7.8
76	UBIE_LISMF (Q71Y84) Menaquinone biosynthesis methyltransferase u...	29	7.8
77	UBIE_LISIN (P67056) Menaquinone biosynthesis methyltransferase u...	29	7.8
78	TBLA_PSESZ (P31850) Tabtoxin biosynthesis enzyme	29	7.8
79	ERMC1_STAAU (P02979) rRNA adenine N-6-methyltransferase (EC 2.1....	29	7.8

>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)|
           (PEAMT 1) (AtNMT1)
          Length = 491

 Score =  155 bits (391), Expect(2) = 1e-37
 Identities = 76/99 (76%), Positives = 88/99 (88%)
 Frame = +3

Query: 216 EVERKVQKSYWEEHSKDLTVESMMLDSRAKDLDKEERPEVLAILPSYEGKTVLELGAGIG 395
           E ER +QK+YW EHS DLTVE+MMLDSRA DLDKEERPEVL++LP YEGK+VLELGAGIG
Sbjct: 6   EEERDIQKNYWIEHSADLTVEAMMLDSRASDLDKEERPEVLSLLPPYEGKSVLELGAGIG 65

Query: 396 RFTGELAKEAGHVIALDFIDSVIKKNEEINGHIHSNITF 512
           RFTGELA++AG +IALDFID+VIKKNE INGH + N+ F
Sbjct: 66  RFTGELAQKAGELIALDFIDNVIKKNESINGH-YKNVKF 103



 Score = 21.2 bits (43), Expect(2) = 1e-37
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 491 HPQQHHLSCAPDVTSPELKI 550
           H +     CA DVTSP+LKI
Sbjct: 97  HYKNVKFMCA-DVTSPDLKI 115

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>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)|
          Length = 494

 Score =  145 bits (365), Expect = 1e-34
 Identities = 73/97 (75%), Positives = 84/97 (86%)
 Frame = +3

Query: 222 ERKVQKSYWEEHSKDLTVESMMLDSRAKDLDKEERPEVLAILPSYEGKTVLELGAGIGRF 401
           ER+V K YW EHS DLTVE+MMLDS+A DLDK ERPEVL++LP YEGK+VLELGAGIGRF
Sbjct: 11  EREVFKKYWIEHSVDLTVEAMMLDSQASDLDKVERPEVLSMLPPYEGKSVLELGAGIGRF 70

Query: 402 TGELAKEAGHVIALDFIDSVIKKNEEINGHIHSNITF 512
           TGELA++A  VIALDFI+SVIKKNE INGH + N+ F
Sbjct: 71  TGELAEKASQVIALDFIESVIKKNESINGH-YKNVKF 106

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>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC|
           2.1.1.103)
          Length = 490

 Score =  142 bits (359), Expect = 5e-34
 Identities = 71/102 (69%), Positives = 87/102 (85%)
 Frame = +3

Query: 207 AFGEVERKVQKSYWEEHSKDLTVESMMLDSRAKDLDKEERPEVLAILPSYEGKTVLELGA 386
           ++GE ER++QK+YW+EHS  L+VE+MMLDS+A DLDKEERPE+LA LP  EG TVLE GA
Sbjct: 3   SYGE-EREIQKNYWKEHSVGLSVEAMMLDSKASDLDKEERPEILAFLPPIEGTTVLEFGA 61

Query: 387 GIGRFTGELAKEAGHVIALDFIDSVIKKNEEINGHIHSNITF 512
           GIGRFT ELA++AG VIA+DFI+SVIKKNE INGH + N+ F
Sbjct: 62  GIGRFTTELAQKAGQVIAVDFIESVIKKNENINGH-YKNVKF 102

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>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC|
           2.1.1.103)
          Length = 475

 Score =  135 bits (340), Expect(2) = 7e-32
 Identities = 66/87 (75%), Positives = 78/87 (89%)
 Frame = +3

Query: 252 EHSKDLTVESMMLDSRAKDLDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGH 431
           EHS DLTVE+MMLDS+A DLDKEERPEVL+++P YEGK+VLELGAGIGRFTGELA++AG 
Sbjct: 2   EHSSDLTVEAMMLDSKASDLDKEERPEVLSLIPPYEGKSVLELGAGIGRFTGELAQKAGE 61

Query: 432 VIALDFIDSVIKKNEEINGHIHSNITF 512
           VIALDFI+S I+KNE +NGH + NI F
Sbjct: 62  VIALDFIESAIQKNESVNGH-YKNIKF 87



 Score = 21.2 bits (43), Expect(2) = 7e-32
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 491 HPQQHHLSCAPDVTSPELKI 550
           H +     CA DVTSP+LKI
Sbjct: 81  HYKNIKFMCA-DVTSPDLKI 99

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>KSGA_GEOSL (Q74C12) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 276

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 312 DKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           D+     + A++ +  G+ +LE+G G G  T  LA++AG ++A++  D ++
Sbjct: 19  DRSVLSRIAALVSAGAGERILEIGPGKGALTSYLAEQAGQLVAVELDDRLV 69

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>KSGA_METTH (O27381) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 273

 Score = 35.8 bits (81), Expect = 0.083
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 309 LDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALD 446
           +D+ +R  +L      E   VLE+G GIG  T  +A+ AGHV A++
Sbjct: 29  IDEVKRQRILEYADLREDDRVLEIGPGIGTLTLPMAELAGHVTAIE 74

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>Y912_HAEIN (P44074) Hypothetical protein HI0912|
          Length = 254

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 321 ERPEVLAILPSYEGKTVLELGAGI-GRFTGELAKEAGHVIALDFIDSVIKKNEE 479
           E+P +L++LP+ +GK +L+LG G  G     L + A  VI  D  + ++++ E+
Sbjct: 32  EKPTMLSLLPNLKGKKLLDLGCGTGGHLQLYLERGAAKVIGTDLSEKMLEQAEK 85

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>ERMJ_BACAN (Q04720) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)|
           (Macrolide-lincosamide-streptogramin B resistance
           protein) (Erythromycin resistance protein)
          Length = 287

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = +3

Query: 366 TVLELGAGIGRFTGELAKEAGHVIALD----FIDSVIKKNEEINGHIHSN 503
           TVLELGAG G  T  L+++AG V+A++    F+D + +K  +     HSN
Sbjct: 47  TVLELGAGKGALTTVLSQKAGKVLAVENDSKFVDILTRKTAQ-----HSN 91

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>ERMD_BACLI (Q03986) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)|
           (Macrolide-lincosamide-streptogramin B resistance
           protein) (Erythromycin resistance protein)
          Length = 287

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = +3

Query: 366 TVLELGAGIGRFTGELAKEAGHVIALD----FIDSVIKKNEEINGHIHSN 503
           TVLELGAG G  T  L+++AG V+A++    F+D + +K  +     HSN
Sbjct: 47  TVLELGAGKGALTTVLSQKAGKVLAVENDSKFVDILTRKTAQ-----HSN 91

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>KSGA_METMA (Q8PU18) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 271

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +3

Query: 366 TVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           TVLE+GAGIG  T  LA+ A  VIA++   +++
Sbjct: 41  TVLEIGAGIGNLTERLARRAKKVIAVELDPALV 73

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>UBIG_XYLFT (Q87BG5) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 246

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 351 SYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIK 467
           S  G  VL++G G G  +  LA++  HV A+D +  +IK
Sbjct: 53  SLSGARVLDVGCGGGLLSEALARQGAHVTAIDLVPELIK 91

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>KSGA_METAC (Q8TQU8) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 269

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +3

Query: 366 TVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           T+LE+GAGIG  T  LA+ A  VIA++   +++
Sbjct: 41  TILEIGAGIGNLTERLARRAKKVIAVELDPALV 73

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>RUMA_METCA (Q606W5) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 443

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +3

Query: 309 LDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALD-FIDSVIKKNEEIN 485
           ++++   +V+  L     + VL+L  G+G FT  LA+ AGHV  ++   ++V +      
Sbjct: 281 INRQMIDQVMQALDPQPEERVLDLFCGLGNFTLPLARRAGHVTGVEGGAEAVARAIRNAA 340

Query: 486 GHIHSNITFHV 518
            +   N+ FHV
Sbjct: 341 DNGIGNVEFHV 351

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>KSGA_DESPS (Q6AL71) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 295

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEE 479
           E   + E+G G+G  T  +A +A HV  ++  + +IK +EE
Sbjct: 44  EDDIITEIGVGLGALTVPMAHQAKHVYGIEIDNGIIKYHEE 84

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>RUMA_VIBF1 (Q5E320) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 449

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +3

Query: 303 KDLDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI---KKN 473
           ++++++   + L+ L   E  +VL+L  G+G F+  LAK+   V+ ++ +D ++   K N
Sbjct: 286 RNVNEQMVEQALSWLDLNENDSVLDLFCGLGNFSLPLAKKVKTVVGIEGVDEMVQRAKLN 345

Query: 474 EEINGHIHSNITFH 515
            E N    SN++F+
Sbjct: 346 AERNQ--LSNVSFY 357

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>KSGA_ONYPE (Q6YPJ4) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 268

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 351 SYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEEINGHIHSNITF 512
           S   K VLE+G G G  T  +  +A HV+A + ID+ +K       H + NI +
Sbjct: 28  SITDKNVLEIGPGKGALTKIIVPQAKHVLAYE-IDATLKPFLNFENHNNVNIIY 80

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>RUMA_HAEDU (Q7VKU9) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 442

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVIKK---NEEINGHIHSNITFH 515
           +L+L  GIG F+  +A++AG V+ ++ ++ ++K+   N++ +G   +NI F+
Sbjct: 301 ILDLFCGIGNFSLPIAQQAGFVVGVEGVEEMVKQAKINQQTSG--LNNIAFY 350

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>KSGA_PYRKO (Q5JI54) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 279

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALD 446
           E  TVLE+G G+G  T  L+K AG V A++
Sbjct: 42  EKDTVLEIGPGLGVLTDPLSKRAGKVYAIE 71

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>BCHM_RHOCA (P26236) Magnesium-protoporphyrin O-methyltransferase (EC 2.1.1.11)|
           (Magnesium-protoporphyrin IX methyltransferase)
          Length = 224

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = +3

Query: 294 SRAKDLDKEERPEVLAILPS-----YEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDS 458
           S+ +   +E R  + A++ S       G  V++ G G G  T ELA+    V+A+D    
Sbjct: 35  SKVRQTVREGRDTMRAVMLSRLPDDLTGCRVMDAGCGTGLTTVELARRGADVVAVDISPQ 94

Query: 459 VIK-KNEEINGHIHSNITFHV 518
           +I    + +   +   ++FHV
Sbjct: 95  LIDIAKDRLPPELRGKVSFHV 115

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>KSGA_CHLCV (Q823V2) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 278

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 330 EVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALD 446
           ++LA+     G  VLE+G G G  T  L  +  HV+AL+
Sbjct: 37  KILAVSCVEAGDWVLEIGPGFGALTEVLVNQGAHVVALE 75

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>MDG1_YEAST (P53885) Signal transduction protein MDG1 (Multicopy suppressor of|
           defective G-protein 1)
          Length = 366

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 16/65 (24%)
 Frame = +3

Query: 186 TITVVENAFGEVERKVQKSYWEEH----------------SKDLTVESMMLDSRAKDLDK 317
           T T++EN  G  E K  K Y E H                 K  + ES + +  A+DL+K
Sbjct: 180 TTTIIENNVGVNEEKAIKPYEENHPKVNLVKSEGYVTDGLGKTQSSESRLYELSAEDLEK 239

Query: 318 EERPE 332
           EE  E
Sbjct: 240 EEEEE 244

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>KSGA_PYRFU (Q8TH24) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 273

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVIK 467
           VLE+G G G  T EL+K AG V A++    +I+
Sbjct: 46  VLEVGPGFGFLTDELSKRAGKVYAIELDKRIIE 78

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>ERMK_BACLI (P45438) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)|
           (Macrolide-lincosamide-streptogramin B resistance
           protein) (Erythromycin resistance protein)
          Length = 287

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +3

Query: 366 TVLELGAGIGRFTGELAKEAGHVIALD 446
           TVLELGAG G  T  L+++AG V+A++
Sbjct: 47  TVLELGAGKGALTTMLSQKAGKVLAVE 73

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>KSGA_LACPL (Q88Z93) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 296

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           V+E+G GIG  T  LA+ A HV+A +  D ++
Sbjct: 55  VIEIGPGIGALTEYLARAAHHVLAFEIDDRLL 86

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>KSGA_THEMA (Q9X1F1) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 279

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSV 461
           V+E+GAG G  T ELAK    VIA +  +S+
Sbjct: 63  VVEIGAGAGTLTEELAKTGARVIAYEIDESL 93

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>KSGA_CLOPE (Q8XHG8) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 285

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           E   V+E+G G+G  T +L K A  V+A++   S+I
Sbjct: 48  EDDLVIEIGPGVGTLTVQLLKRAKRVVAIELDSSLI 83

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>KSGA_STRA5 (Q8DXR8) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 290

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           +G  V+E+G GIG  T  LA+ A  V+A +  D +I
Sbjct: 46  KGVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLI 81

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>KSGA_STRA3 (Q8E3D7) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 290

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           +G  V+E+G GIG  T  LA+ A  V+A +  D +I
Sbjct: 46  KGVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLI 81

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>CBIT_METJA (Q57836) Probable cobalt-precorrin-6Y C(15)-methyltransferase|
           [decarboxylating] (EC 2.1.1.-)
          Length = 183

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEE 479
           V+++G G G  T E+AK    V A+D++D  I+  ++
Sbjct: 39  VVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQ 75

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>RUMA_PHOPR (Q6LMS7) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 466

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +3

Query: 303 KDLDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI-KKNEE 479
           +D++K+   +    L       VL+L  G+G F+  LAK A  V+ ++ ID ++ +  E 
Sbjct: 290 RDVNKKMVEQATDWLDLQPSDRVLDLFCGLGNFSLPLAKHAKAVVGVEGIDEMVHRATEN 349

Query: 480 INGHIHSNITFH 515
              +  +N TF+
Sbjct: 350 AMCNKQNNATFY 361

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>PIMT1_METAC (Q8TT93) Protein-L-isoaspartate O-methyltransferase 1 (EC 2.1.1.77)|
           (Protein-beta-aspartate methyltransferase 1) (PIMT 1)
           (Protein L-isoaspartyl methyltransferase 1)
           (L-isoaspartyl protein carboxyl methyltransferase 1)
          Length = 251

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = +3

Query: 342 ILPSYEGKTVLELGAGIG---RFTGELAKEAGHVIALDFIDSVIK-KNEEINGHIHSNIT 509
           +L   EG  VLE+GAG G      GEL  ++GHV  ++ I+ ++    E +    + N+T
Sbjct: 109 LLELSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYENVT 168

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>UBIG_XYLFA (Q9PAM5) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 246

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 360 GKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIK 467
           G  VL++G G G  +  LA++  HV A+D    +IK
Sbjct: 56  GARVLDVGCGGGLLSEALARQGAHVTAIDLAPELIK 91

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>TRMB_THET8 (Q5SHW1) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 311

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAK 419
           EG  VLE+G G GRFT ELA+
Sbjct: 22  EGPLVLEIGFGDGRFTAELAR 42

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>TRMB_THET2 (Q72I77) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 311

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAK 419
           EG  VLE+G G GRFT ELA+
Sbjct: 22  EGPLVLEIGFGDGRFTAELAR 42

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>KSGA_PYRHO (O59487) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 268

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIK 467
           E   +LE+G G+G  T ELAK A  V  ++    +I+
Sbjct: 42  ENDVILEVGPGLGFLTDELAKRAKKVYTIEIDQKIIE 78

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>ERMG_BACSH (P06571) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)|
           (Macrolide-lincosamide-streptogramin B resistance
           protein) (Erythromycin resistance protein)
          Length = 244

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDS 458
           E   + E+GAG G FT EL K    V A++ IDS
Sbjct: 30  EKDNIFEIGAGKGHFTAELVKRCNFVTAIE-IDS 62

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>Y1863_LISIN (Q92AQ7) Hypothetical RNA methyltransferase lin1863 (EC 2.1.1.-)|
          Length = 453

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +3

Query: 363 KTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI---KKNEEINGHIHSNITF 512
           +TV++   GIG  +  LAK+A HV  ++ +D  I   + N E+N    +N TF
Sbjct: 308 ETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNN--LTNTTF 358

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>Y1145_PYRAB (Q9UZK1) Hypothetical RNA methyltransferase PYRAB11450 (EC 2.1.1.-)|
          Length = 410

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
 Frame = +3

Query: 327 PEVLAILPSY-EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDS---VIKKNEEIN 485
           P +L  + S+ EG  VL+L +G+G F+  LAK+   V  ++  +    V KK+ E+N
Sbjct: 260 PILLKAVESFAEGSKVLDLYSGVGTFSLYLAKKGFEVTGVEVNEESVRVAKKSAEVN 316

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>KSGA_LISMO (Q8YAE2) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 295

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALD 446
           V+E+G GIG  T +LAK A  V+A +
Sbjct: 52  VIEIGPGIGALTEQLAKTANEVVAFE 77

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>KSGA_LISMF (Q724M5) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 295

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALD 446
           V+E+G GIG  T +LAK A  V+A +
Sbjct: 52  VIEIGPGIGALTEQLAKTANEVVAFE 77

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>KSGA_LISIN (Q92F79) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 295

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALD 446
           V+E+G GIG  T +LAK A  V+A +
Sbjct: 52  VIEIGPGIGALTEQLAKTANEVVAFE 77

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>KSGA_ENTFA (Q837A7) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 295

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           V+E+G GIG  T +LA  A  V+A +  D +I
Sbjct: 54  VVEVGPGIGALTEQLAMNAAQVVAFEIDDRLI 85

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>Y3374_MYCBO (P65349) Putative methyltransferase Mb3374 (EC 2.1.1.-)|
          Length = 243

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 327 PEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           PE +  L     + VL+LGAG G+ T  L +    V+A+D I  ++
Sbjct: 28  PEAIDWLLPAAARRVLDLGAGTGKLTTRLVERGLDVVAVDPIPEML 73

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>Y3342_MYCTU (P65348) Putative methyltransferase Rv3342/MT3445 (EC 2.1.1.-)|
          Length = 243

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 327 PEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI 464
           PE +  L     + VL+LGAG G+ T  L +    V+A+D I  ++
Sbjct: 28  PEAIDWLLPAAARRVLDLGAGTGKLTTRLVERGLDVVAVDPIPEML 73

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>KSGA_AZOSE (Q5P7J1) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 265

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 360 GKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEE 479
           G+TV+E+G G+G  T  L +  GH+  ++    +I +  E
Sbjct: 33  GETVVEIGPGLGAMTDPLVERLGHLHVVEIDRDLIARLHE 72

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>Y1435_CLOAB (Q97J51) Hypothetical RNA methyltransferase CAC1435 (EC 2.1.1.-)|
          Length = 456

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 330 EVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI---KKNEEIN 485
           EVL  L     KTV +L  G G      +K+A  VI ++ I+  +   K+N ++N
Sbjct: 301 EVLEFLGDVSNKTVFDLYCGTGTIGQLASKKAEKVIGIELIEEAVEAAKENTKLN 355

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>NAPA_VIBCH (Q9KLR4) Periplasmic nitrate reductase precursor (EC 1.7.99.4)|
          Length = 829

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +3

Query: 201 ENAFGEVERKVQ------KSYWEEHSKDLTVESMMLDSRAKDLDKEERPEVLAILPSYEG 362
           E A+G  ER+ Q      K+  E HS    V       + +D+  EE   +LA  P Y G
Sbjct: 534 EGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEE---LLAKAPQYRG 590

Query: 363 KTVLEL 380
           KT+ ++
Sbjct: 591 KTLYDV 596

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>Y1172_PYRFU (Q8U1N4) Hypothetical RNA methyltransferase PF1172 (EC 2.1.1.-)|
          Length = 411

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALD---FIDSVIKKNEEIN 485
           EG+ V+++ +G+G F   LAK+   V+  D   F   +  KN EIN
Sbjct: 272 EGEKVVDMYSGVGTFGVYLAKKGMKVVGFDSNAFAIEMANKNAEIN 317

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>RUMA_VIBCH (Q9KPC1) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 440

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVIK 467
           VL+L  G+G FT  LAK+A  V+ ++ +D +++
Sbjct: 297 VLDLFCGLGNFTLPLAKQAQAVVGVEGVDEMVQ 329

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>KSGA_LACLA (Q9CHN8) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 294

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEE 479
           V+E+G GIG  T  L +EA  V+A +   S+I   EE
Sbjct: 56  VIEIGPGIGSLTQYLLEEAAEVMAFEIDKSLIPILEE 92

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>Y1776_LISMF (Q71YR7) Hypothetical RNA methyltransferase LMOf2365_1776 (EC|
           2.1.1.-)
          Length = 453

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 363 KTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI---KKNEEIN 485
           +TV++   GIG  +  LAK+A HV  ++ +D  I   + N E+N
Sbjct: 308 ETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELN 351

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>Y1751_LISMO (Q8Y6D6) Hypothetical RNA methyltransferase lmo1751 (EC 2.1.1.-)|
          Length = 453

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 363 KTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI---KKNEEIN 485
           +TV++   GIG  +  LAK+A HV  ++ +D  I   + N E+N
Sbjct: 308 ETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELN 351

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>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 42)
            (Ubiquitin-specific-processing protease 42)
            (Deubiquitinating enzyme 42)
          Length = 1325

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +2

Query: 419  GGRPRHRAGLHRQRHQE----ERGDQWAHPQQHHLSCAPDVTSP 538
            GGR   RAGLH + H++     RG + A  ++ H   +P   +P
Sbjct: 1079 GGREHERAGLHERPHKDHNRGRRGCEPARERERHRPSSPRAGAP 1122

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>YEFA_BACSU (O31503) Hypothetical RNA methyltransferase yefA (EC 2.1.1.-)|
          Length = 459

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +3

Query: 363 KTVLELGAGIGRFTGELAKEAGHVIALDFIDSVI---KKNEEINGHIHS 500
           +TV++   GIG  +  LAK+A  V  ++ +   I   K+N E+NG+ ++
Sbjct: 313 ETVIDAYCGIGTISLFLAKQAKKVYGVEIVPEAIEDAKRNAELNGNTNA 361

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>NAPA1_PHOPR (Q6LTV9) Periplasmic nitrate reductase 1 precursor (EC 1.7.99.4)|
          Length = 828

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +3

Query: 201 ENAFGEVERKVQKSYWEEHSK-DLTVESMMLDSRAKDLDKEE--RPEVLAILPSYEGKTV 371
           E A+G  ER+ Q  Y +  S+ D   +   L   +K    EE    ++LA +P Y GKT+
Sbjct: 534 EGAYGNAERRTQAWYQQVKSQGDSKSDLWQLMEFSKRFKIEEVWGEDLLAQMPEYRGKTM 593

Query: 372 LEL 380
            E+
Sbjct: 594 YEV 596

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>Y1137_PYRHO (O58864) Hypothetical RNA methyltransferase PH1137 (EC 2.1.1.-)|
          Length = 407

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALD---FIDSVIKKNEEIN 485
           EG+ VL++ +G+G F   LAK    V+  D   F   + +KN +IN
Sbjct: 271 EGERVLDMYSGVGTFGIYLAKRGFKVVGFDSNEFAIEMARKNAKIN 316

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>RUMA_VIBPA (Q87LP5) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 439

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVIKK 470
           VL+L  G+G F+  +AK A HV+ ++ +  +++K
Sbjct: 297 VLDLFCGLGNFSLPIAKRAKHVVGVEGVAEMVEK 330

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>ERMG_LACRE (Q00014) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)|
           (Macrolide-lincosamide-streptogramin B resistance
           protein) (Erythromycin resistance protein)
          Length = 244

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 291 DSRAKDLDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALD 446
           DS+     K    E+L  +       ++E+G+G G F+ ELAK   +V A++
Sbjct: 8   DSQNFITSKHHINEILRNVHLNTNDNIIEIGSGKGHFSFELAKRCNYVTAIE 59

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>VL2_HPV49 (P36762) Minor capsid protein L2|
          Length = 521

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 216 EVERKVQKSYWEEHSKDLTVESMMLDSRAKDLDKEERPEVLAILP 350
           + E  ++ S   EHS D T+    ++S   DL+ +E P+V+ + P
Sbjct: 372 DAEESIELSLLGEHSGDATIVQGPVESSFVDLNVQELPQVIEVDP 416

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>KSGA_BACSK (Q5WLW2) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 296

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEE 479
           ++E+G GIG  T +LAK+A  V+A +    +I   E+
Sbjct: 54  IVEIGPGIGALTEQLAKKADKVVAFEIDGRLIPVLED 90

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>CARB_STRTH (P13079) rRNA methyltransferase (EC 2.1.1.-) (Carbomycin-resistance|
           protein)
          Length = 299

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 309 LDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALD 446
           +D+E     +       G+ VLE+GAG G  T ELA+    V+A +
Sbjct: 58  VDRETVQRFVRFADPDPGEVVLEVGAGNGAITRELARLCRRVVAYE 103

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>AEF1_DROME (P39413) Adult enhancer factor 1 (AEF-1)|
          Length = 308

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 416 QGGRPRHRAGLHRQRHQEERGDQWAHPQQHHLSCAPDVTSP 538
           Q   P H A + +Q+ Q+++  Q  H QQ   S  P    P
Sbjct: 45  QATHPAHMAAVQQQQQQQQQQQQQHHQQQQQQSSGPPSVPP 85

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>PIMT2_ARCFU (O27962) Protein-L-isoaspartate O-methyltransferase 2 (EC 2.1.1.77)|
           (Protein-beta-aspartate methyltransferase 2) (PIMT 2)
           (Protein L-isoaspartyl methyltransferase 2)
           (L-isoaspartyl protein carboxyl methyltransferase 2)
          Length = 219

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +3

Query: 342 ILPSYEGKTVLELGAGIG---RFTGELAKEAGHVIALDFIDSVIKKNEEI 482
           +L   EG  VLE+G G G     T E+  ++G VI++++I  + ++   I
Sbjct: 71  LLDLREGDKVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAERARAI 120

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>KSGA_TREDE (Q73NS2) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 293

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +3

Query: 309 LDKEERPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAGHVIALD 446
           +DK+ R  +++ L   +G  V E+G G+G  T  L ++  H+ A +
Sbjct: 39  IDKKTRENLISFLTLDKGTRVWEVGPGLGAMTYLLLEKGVHLTAFE 84

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>NAPA_PASMU (Q9CKL8) Periplasmic nitrate reductase precursor (EC 1.7.99.4)|
          Length = 828

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +3

Query: 201 ENAFGEVERKVQKSYWEEHSK-----DLTVESMMLDSRAKDLDKEERPEVLAILPSYEGK 365
           E A+G  ER+ Q  +W +  K        V  ++  S+    D+    EVLA  P Y+GK
Sbjct: 532 EGAYGNAERRTQ--FWYQQVKAPGESKSDVWQLVEFSKYFTTDEMWPAEVLAANPEYKGK 589

Query: 366 TVLEL 380
           T+ E+
Sbjct: 590 TLYEV 594

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>KSGA_BACSU (P37468) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 292

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALD 446
           V+E+G GIG  T +LAK A  V+A +
Sbjct: 52  VIEIGPGIGALTEQLAKRAKKVVAFE 77

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>VPG_BYDVP (P09513) Putative genome-linked protein precursor (VPG) (17 kDa|
           protein)
          Length = 153

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 487 PLISSFFLMTLSMKSSAMTWPASLASSPVKRPMPAPSSSTVL 362
           P+  +  L++ + ++S   W A+L  SP  RP P PS    L
Sbjct: 103 PIRQALSLLSSTPRASNQPWVATLIPSPSARPPPRPSGQRQL 144

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>PIMT2_METAC (Q8TT94) Protein-L-isoaspartate O-methyltransferase 2 (EC 2.1.1.77)|
           (Protein-beta-aspartate methyltransferase 2) (PIMT 2)
           (Protein L-isoaspartyl methyltransferase 2)
           (L-isoaspartyl protein carboxyl methyltransferase 2)
          Length = 238

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
 Frame = +3

Query: 342 ILPSYEGKTVLELGAGIG---RFTGELAKEAGHVIALDFIDSVI---KKNEEINGHIHSN 503
           IL   EG  VLE+G G G       EL  + GH+ +++ I+ ++   +KN E  G  + N
Sbjct: 93  ILELSEGHKVLEIGTGSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNLEQMG--YDN 150

Query: 504 IT 509
           +T
Sbjct: 151 VT 152

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>Y2287_ARATH (O81004) GTP-binding protein At2g22870|
          Length = 300

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 255 HSKDLTVESMMLDSRAKDLDKEERPEVLAILPSYEGKTVL 374
           HS+   VE +   +RA+D  K++RPE+  +  S  GK+ L
Sbjct: 97  HSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSL 136

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>UBIE_MICLU (O66128) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 246

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAG---HVIALDFIDSVIKKNEEINGHIHSNITFH 515
           +G   L++  G G +T ++A+  G   HVI LDF ++++   +    HI +    H
Sbjct: 58  KGSKALDVCCGTGDWTIQMAQAVGKNGHVIGLDFSENMLSVAQGKTNHIQNIELIH 113

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>KSGA_SYMTH (Q67JB9) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 285

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 369 VLELGAGIGRFTGELAKEAGHVIALD 446
           VLE+G G+G  T  LA +AG V+ ++
Sbjct: 50  VLEIGPGLGTLTQRLAAKAGRVVCVE 75

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>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 348 PSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEEINGHIHSNI 506
           P    K   E  + + +   E  K A  +I +D IDS+  K E+ NG +   I
Sbjct: 275 PEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI 327

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>KSGA_DEIRA (Q9RU68) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 292

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 360 GKTVLELGAGIGRFTGELAKEAGHVIALD 446
           G+ VLE+G G+G  T E+A     V AL+
Sbjct: 66  GENVLEIGPGLGVLTREVASRGARVTALE 94

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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 348 PSYEGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEEINGHIHSNI 506
           P    K   E  + + +   E  K A  +I +D IDS+  K E+ NG +   I
Sbjct: 275 PEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI 327

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>UBIE_LISMO (P67055) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 237

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +3

Query: 324 RPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAG---HVIALDFIDSVIKKNEE 479
           R E + ++   +G  VL++  G   ++  +A+E G   HV  LDF ++++K   E
Sbjct: 36  RKETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGRE 90

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>UBIE_LISMF (Q71Y84) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 237

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +3

Query: 324 RPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAG---HVIALDFIDSVIKKNEE 479
           R E + ++   +G  VL++  G   ++  +A+E G   HV  LDF ++++K   E
Sbjct: 36  RKETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGRE 90

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>UBIE_LISIN (P67056) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 237

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +3

Query: 324 RPEVLAILPSYEGKTVLELGAGIGRFTGELAKEAG---HVIALDFIDSVIKKNEE 479
           R E + ++   +G  VL++  G   ++  +A+E G   HV  LDF ++++K   E
Sbjct: 36  RKETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGRE 90

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>TBLA_PSESZ (P31850) Tabtoxin biosynthesis enzyme|
          Length = 252

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNEEINGHIHSNITFHVRP 524
           EG  +  +G G G   G+L +    V+A+DF D  +  + +     ++   F + P
Sbjct: 86  EGAIIFSIGCGNGFVEGDLVQAKRRVLAIDFNDEAVALSRKKGVDAYTADFFELEP 141

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>ERMC1_STAAU (P02979) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)|
           (Macrolide-lincosamide-streptogramin B resistance
           protein) (Erythromycin resistance protein)
          Length = 244

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 357 EGKTVLELGAGIGRFTGELAKEAGHVIALDFIDSVIKKNE 476
           E   + E+G+G G FT EL K    V A++    + K  E
Sbjct: 30  EHDNIFEIGSGKGHFTLELVKRCNFVTAIEIDHKLCKTTE 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,061,052
Number of Sequences: 219361
Number of extensions: 832175
Number of successful extensions: 4459
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 4159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4439
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result