ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baalk05 | 523 | AV933997 | not_full | gb|AF262984.1|AF262984 Triticum aestivum cyclophilin A-3 (CyP3) mRNA, complete cds Length = 869 | 500 | not_full | CYPH_MAIZE (P21569) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) Length = 172 | 210 | -- | --- | - | -- | --- | - |
| baalk04 | 685 | AV933996 | not_full | dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 | 398 | not_full | CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) Length = 807 | 500 | -- | --- | - | -- | --- | - |
| baalj24 | 454 | AV933995 | not_full | gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 | 66 | not_full | KPCD2_HUMAN (Q9BZL6) Serine/threonine-protein kinase D2 (EC 2.7.11.13) (nPKC-D2) Length = 878 | 3 | -- | --- | - | -- | --- | - |
| baalj23 | 617 | AV933994 | full | gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform mRNA, partial cds Length = 911 | 149 | not_full | CRYL1_PONPY (Q5RDZ2) Lambda-crystallin homolog Length = 318 | 17 | -- | --- | - | -- | --- | - |
| baalj22 | 265 | AV933993 | not_full | gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 | 14 | not_full | AOTC_XYLFT (Q87EL4) N-acetylornithine carbamoyltransferase (EC 2.1.3.9) (AOTCase) Length = 336 | 5 | -- | --- | - | -- | --- | - |
| baalj21 | 597 | AV933992 | not_full | gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA sequence Length = 1878 | 125 | full | GLYM_FLAPR (P49357) Serine hydroxymethyltransferase 1, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) Length = 517 | 360 | -- | --- | - | -- | --- | - |
| baalj19 | 632 | AV933991 | not_full | ref|NM_192736.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1524 | 63 | not_full | PB1_HUMAN (Q86U86) Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated factor 180) (BAF180) Length = 1689 | 22 | -- | --- | - | -- | --- | - |
| baalj18 | 628 | AV933990 | not_full | ref|XM_476668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1435 | 116 | not_full | FER_HUMAN (P16591) Proto-oncogene tyrosine-protein kinase FER (EC 2.7.10.2) (p94-FER) (c-FER) Length = 822 | 5 | -- | --- | - | -- | --- | - |
| baalj17 | 574 | AV933989 | not_full | ref|NM_187937.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 | 500 | not_full | PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1) (AvrPphB susceptible protein 1) Length = 456 | 118 | -- | --- | - | -- | --- | - |
| baalj16 | 650 | AV933988 | not_full | ref|XM_468533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2511 | 58 | not_full | OPDA_HAEIN (P44573) Oligopeptidase A (EC 3.4.24.70) Length = 681 | 46 | -- | --- | - | -- | --- | - |
| baalj14 | 577 | AV933987 | not_full | gb|AY220735.1| Hordeum vulgare ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 758 | 274 | not_full | UBC4_LYCES (P35135) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) Length = 148 | 187 | -- | --- | - | -- | --- | - |
| baalj10 | 678 | AV933986 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 435 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 162 | -- | --- | - | -- | --- | - |
| baalj08 | 588 | AV933985 | not_full | gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 | 7 | not_full | FIMF_SALTY (P37926) Fimbrial-like protein fimF precursor Length = 172 | 20 | -- | --- | - | -- | --- | - |
| baalj07 | 590 | AV933984 | not_full | gb|M90077.1|WHTTEF1X Wheat translation elongation factor 1 alpha-subunit (TEF1) mRNA, complete cds Length = 2062 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 449 | -- | --- | - | -- | --- | - |
| baalj06 | 622 | AV933983 | not_full | gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein mRNA, complete cds; nuclear gene for chloroplast product Length = 909 | 52 | full | THF1_ORYSA (Q84PB7) Protein THYLAKOID FORMATION1, chloroplast precursor Length = 287 | 32 | -- | --- | - | -- | --- | - |
| baalj04 | 623 | AV933982 | not_full | gb|BT024079.1| Zea mays clone EL01N0525A10 mRNA sequence Length = 2294 | 149 | not_full | KC1_TOXGO (Q6QNM1) Casein kinase I (EC 2.7.11.1) Length = 324 | 500 | -- | --- | - | -- | --- | - |
| baalj03 | 506 | AV933981 | not_full | ref|NM_188678.1| Oryza sativa (japonica cultivar-group), Ozsa8281 predicted mRNA Length = 1323 | 36 | not_full | AMYB_IPOBA (P10537) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) Length = 498 | 22 | -- | --- | - | -- | --- | - |
| baalj02 | 652 | AV933980 | not_full | ref|XM_475203.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 | 30 | not_full | SECY_CYACA (P46249) Preprotein translocase secY subunit Length = 410 | 69 | -- | --- | - | -- | --- | - |
| baali24 | 203 | AV933979 | not_full | emb|AL157695.14| Human DNA sequence from clone RP11-42I11 on chromosome 13, complete sequence Length = 65252 | 14 | not_full | YKZ7_YEAST (P36113) RING finger protein YKR017C Length = 551 | 1 | -- | --- | - | -- | --- | - |
| baali23 | 231 | AV933978 | not_full | gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 | 17 | not_full | YKZ7_YEAST (P36113) RING finger protein YKR017C Length = 551 | 2 | -- | --- | - | -- | --- | - |
| baali22 | 587 | AV933977 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 79 | not_full | Y417_CHLTR (O84422) Probable metal transport system membrane protein CT_417 Length = 293 | 1 | -- | --- | - | -- | --- | - |
| baali19 | 613 | AV933976 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 105 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 249 | -- | --- | - | -- | --- | - |
| baali18 | 559 | AV933975 | full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 179 | not_full | MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C Length = 162 | 7 | -- | --- | - | -- | --- | - |
| baali14 | 636 | AV933974 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 127 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 39 | -- | --- | - | -- | --- | - |
| baali11 | 584 | AV933973 | not_full | ref|XM_467483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1230 | 94 | not_full | ZN496_HUMAN (Q96IT1) Zinc finger protein 496 Length = 587 | 26 | -- | --- | - | -- | --- | - |
| baali09 | 604 | AV832848 | not_full | gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 | 50 | not_full | YDDP_ECOLI (P77268) Hypothetical ABC transporter ATP-binding protein yddP Length = 328 | 500 | -- | --- | - | -- | --- | - |
| baali07 | 682 | AV933972 | not_full | ref|NM_192647.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 | 36 | not_full | DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor Length = 372 | 211 | -- | --- | - | -- | --- | - |
| baali05 | 545 | AV933971 | not_full | ref|XM_480480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1185 | 71 | not_full | LGUL_ORYSA (Q948T6) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) Length = 291 | 41 | -- | --- | - | -- | --- | - |
| baali04 | 542 | AV933970 | not_full | ref|XM_468292.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1238 | 22 | not_full | DCP2_YEAST (P53550) mRNA decapping enzyme 2 (EC 3.-.-.-) (Protein PSU1) Length = 970 | 63 | -- | --- | - | -- | --- | - |
| baali03 | 578 | AV933969 | full | emb|AJ234400.1|HVU234400 Hordeum vulgare partial mRNA; clone cMWG0645 Length = 1050 | 500 | not_full | ACT13_SOLTU (P30173) Actin-101 Length = 377 | 399 | -- | --- | - | -- | --- | - |
| baali02 | 653 | AV933968 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 116 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 41 | -- | --- | - | -- | --- | - |
| baali01 | 654 | AV933967 | not_full | gb|AY108897.1| Zea mays PCO080076 mRNA sequence Length = 1774 | 81 | not_full | CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 | 32 | -- | --- | - | -- | --- | - |
| baalh23 | 596 | AV933966 | not_full | emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase Length = 1800 | 97 | not_full | ASPR_HORVU (P42210) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase) [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] Length = 508 | 105 | -- | --- | - | -- | --- | - |
| baalh22 | 735 | AV933965 | full | ref|XM_474305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 | 500 | not_full | PFPI_PYRHO (O59413) Intracellular protease 1 (EC 3.2.-.-) (Intracellular protease I) Length = 166 | 98 | -- | --- | - | -- | --- | - |
| baalh21 | 595 | AV933964 | not_full | dbj|AK111521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M10, full insert sequence Length = 1479 | 63 | not_full | IFRH_ARATH (P52577) Isoflavone reductase homolog P3 (EC 1.3.1.-) Length = 310 | 63 | -- | --- | - | -- | --- | - |
| baalh20 | 603 | AV933963 | not_full | ref|NM_196313.1| Oryza sativa (japonica cultivar-group) putative protein-tyrosine-phosphatase (OSJNBa0011L09.21), mRNA Length = 1134 | 92 | not_full | PP2A_PARTE (P48726) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) (PPN) Length = 315 | 141 | -- | --- | - | -- | --- | - |
| baalh19 | 586 | AV933962 | not_full | ref|XM_472773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 | 54 | not_full | NOT4_YEAST (P34909) General negative regulator of transcription subunit 4 Length = 587 | 34 | -- | --- | - | -- | --- | - |
| baalh18 | 399 | AV933961 | not_full | dbj|AK102691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103D10, full insert sequence Length = 2549 | 30 | not_full | HIF1A_ONCMY (Q98SW2) Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1 alpha) Length = 766 | 6 | -- | --- | - | -- | --- | - |
| baalh13 | 614 | AV933960 | not_full | ref|NM_189035.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3246 | 35 | not_full | BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum protein MSE55) Length = 391 | 42 | -- | --- | - | -- | --- | - |
| baalh12 | 594 | AV933959 | not_full | gb|BT016584.1| Zea mays clone Contig417 mRNA sequence Length = 1300 | 62 | not_full | PCY1A_HUMAN (P49585) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15) (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 | 21 | -- | --- | - | -- | --- | - |
| baalh08 | 531 | AV933958 | not_full | emb|AJ555613.1|HVU555613 Hordeum vulgare subsp. vulgare mRNA for metallothionein-like protein type 3 (mt-3a gene) Length = 334 | 120 | not_full | MT3_MUSAC (Q40256) Metallothionein-like protein type 3 (MT-3) (MWMT3) Length = 65 | 10 | -- | --- | - | -- | --- | - |
| baalh06 | 614 | AV933957 | not_full | ref|NM_184115.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1421 | 173 | not_full | ALFD_PEA (Q01517) Fructose-bisphosphate aldolase 2, chloroplast (EC 4.1.2.13) Length = 349 | 78 | -- | --- | - | -- | --- | - |
| baalh04 | 588 | AV933956 | not_full | ref|NM_192647.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 | 36 | not_full | DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor Length = 372 | 207 | -- | --- | - | -- | --- | - |
| baalh03 | 531 | AV933955 | not_full | gb|AY107731.1| Zea mays PCO069957 mRNA sequence Length = 925 | 71 | not_full | FMRA_CALPA (Q01133) Antho-RFamide neuropeptides precursor [Contains: Antho-RFamide] Length = 334 | 36 | -- | --- | - | -- | --- | - |
| baalh02 | 644 | AV933954 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 417 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 162 | -- | --- | - | -- | --- | - |
| baalg24 | 651 | AV933953 | not_full | gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 | 500 | not_full | NHR71_CAEEL (Q9GTD4) Nuclear hormone receptor family member nhr-71 Length = 579 | 4 | -- | --- | - | -- | --- | - |
| baalg23 | 509 | AV933952 | full | ref|XM_474267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 | 500 | not_full | R1A3_SOLDE (Q6L440) Putative late blight resistance protein homolog R1A-3 Length = 760 | 19 | -- | --- | - | -- | --- | - |
| baalg21 | 625 | AV933951 | not_full | gb|AF059600.1|AF059600 Hordeum vulgare acetohydroxyacid synthase (AHAS) mRNA, partial cds Length = 1626 | 204 | not_full | ILV1_ORYSA (Q6K2E8) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetohydroxy-acid synthase 1) Length = 644 | 107 | -- | --- | - | -- | --- | - |
| baalg20 | 293 | AV933950 | not_full | emb|CR626934.1| Triticum aestivum Length = 94398 | 5 | not_full | CBX6_HUMAN (O95503) Chromobox protein homolog 6 Length = 412 | 21 | -- | --- | - | -- | --- | - |
| baalg18 | 524 | AV933949 | not_full | ref|XM_472665.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 654 | 64 | not_full | POLG_ENMGO (P12296) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D)] (Fragment) Length = 834 | 8 | -- | --- | - | -- | --- | - |
