Clone Name	baalj19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|NM_192736.1| Oryza sativa (japonica cultivar-group), predic...	349	7e-93
2	dbj|AK102292.1| Oryza sativa (japonica cultivar-group) cDNA clon...	349	7e-93
3	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	230	4e-57
4	dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic D...	230	4e-57
5	emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 ...	58	4e-05
6	gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete se...	50	0.009
7	emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, c...	42	2.2
8	gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete...	42	2.2
9	emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in...	42	2.2
10	emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chrom...	42	2.2
11	emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chro...	42	2.2
12	ref|NM_117262.2| Arabidopsis thaliana signal transducer AT4G1192...	40	8.6
13	gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, com...	40	8.6
14	gb|AY233385.1| Zygophyllum atriplicoides tRNA-Leu (trnL) gene, i...	40	8.6
15	gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome...	40	8.6
16	gb|AC102285.7| Mus musculus chromosome 19, clone RP24-329P13, co...	40	8.6
17	gb|AY300791.1| Zygophyllum rosowii chloroplast tRNA-Leu gene, in...	40	8.6
18	gb|AY300787.1| Zygophyllum gontscharovii chloroplast tRNA-Leu ge...	40	8.6
19	gb|AY300781.1| Roepera morgsana chloroplast tRNA-Leu gene, intron	40	8.6
20	gb|AY300780.1| Roepera leptopetala chloroplast tRNA-Leu gene, in...	40	8.6
21	gb|AY300779.1| Roepera iodocarpa chloroplast tRNA-Leu gene, intron	40	8.6
22	gb|AY300778.1| Roepera foetida chloroplast tRNA-Leu gene, intron	40	8.6
23	gb|AY300776.1| Roepera compressa chloroplast tRNA-Leu gene, intron	40	8.6
24	gb|AC147048.2| Mus musculus BAC clone RP23-91H23 from chromosome...	40	8.6
25	gb|AC160517.3| Mus musculus chromosome 8, clone RP23-279A11, com...	40	8.6
26	gb|AC145425.5| Homo sapiens 3 BAC RP11-411F5 (Roswell Park Cance...	40	8.6
27	gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, comp...	40	8.6
28	gb|AC131786.3| Mus musculus BAC clone RP24-397H7 from chromosome...	40	8.6
29	gb|AY233384.1| Roepera apiculata tRNA-Leu (trnL) gene, intron; c...	40	8.6
30	emb|AL592435.2| Human DNA sequence from clone RP11-77M5 on chrom...	40	8.6
31	emb|AL138969.16| Human DNA sequence from clone RP1-110C15 on chr...	40	8.6
32	emb|AL138756.23| Human DNA sequence from clone RP11-4O1 on chrom...	40	8.6
33	gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, com...	40	8.6
34	gb|AY091235.1| Arabidopsis thaliana putative Srw1 protein (At4g1...	40	8.6
35	gb|AY063875.1| Arabidopsis thaliana putative Srw1 protein (At4g1...	40	8.6
36	emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, ...	40	8.6
37	emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, B...	40	8.6
38	emb|AJ630364.1| Canis familiaris major histocompatibility comple...	40	8.6
39	gb|AC103560.2| Homo sapiens chromosome 3 clone RP11-673E20, comp...	40	8.6
40	gb|AC024102.19| Homo sapiens 3 BAC RP11-252O10 (Roswell Park Can...	40	8.6
41	gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cance...	40	8.6
42	gb|AC079768.8| Homo sapiens BAC clone RP11-205M3 from 4, complet...	40	8.6
43	gb|AC152161.4| Mus musculus chromosome 19, clone RP23-162O21, co...	40	8.6
44	emb|BX826598.1|CNS0A42I Arabidopsis thaliana Full-length cDNA Co...	40	8.6
45	gb|AC109354.4| Homo sapiens BAC clone RP11-536N13 from 2, comple...	40	8.6
46	gb|AC013445.8| Homo sapiens BAC clone RP11-489J10 from 2, comple...	40	8.6
47	gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, comple...	40	8.6
48	gb|AC084499.1|CBRG12M22 Caenorhabditis briggsae cosmid G12M22, c...	40	8.6
49	gb|AC116764.10| Mus musculus chromosome 15, clone RP23-388P12, c...	40	8.6
50	gb|AC009044.3|AC009044 Homo sapiens chromosome 16 clone RP11-190...	40	8.6
51	gb|AC140552.3| Mus musculus BAC clone RP24-372G15 from 8, comple...	40	8.6
52	emb|CT737308.2| Pan troglodytes chromosome X clone CH251-63C08 m...	40	8.6
53	emb|CT737235.2| Pan troglodytes chromosome X clone PTB-029K08 ma...	40	8.6
54	dbj|AP002961.2| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	8.6
55	emb|AL845418.17| Mouse DNA sequence from clone RP23-207F4 on chr...	40	8.6
56	gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone hRPK.2...	40	8.6
57	gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complet...	40	8.6
58	gb|AF051897.1|AF051897 Oryctolagus cuniculus sterol carrier prot...	40	8.6
59	gb|AC171004.2| Mus musculus BAC clone RP23-67N16 from chromosome...	40	8.6
60	emb|AJ387973.1|ZRU387973 Zygophyllum hirticaule chloroplast tRNA...	40	8.6
61	emb|AJ387970.1|ZGL387970 Zygophyllum glaucum chloroplast tRNA-Le...	40	8.6
62	emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chro...	40	8.6
63	gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome	40	8.6

---

>ref|NM_192736.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1524

 Score =  349 bits (176), Expect = 7e-93
 Identities = 355/415 (85%)
 Strand = Plus / Plus

                                                                       
Query: 4   tccttcacctttgncaatgtgaagtactcactgtatgactgtgtatatctttttaaaaat 63
           |||||||| |||| |||||||||||||||||||||||||  ||||||||||||||| | |
Sbjct: 88  tccttcacatttgacaatgtgaagtactcactgtatgacaatgtatatctttttaagagt 147

                                                                       
Query: 64  ggagaacctgaaccatacattggaaagatagtaaagatatggcagcaaaatgaagctaag 123
           || ||  ||||||| ||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct: 148 ggtgagtctgaaccttacattggaaagataataaagatatggcagcaaaatcaggctaag 207

                                                                       
Query: 124 aaagtaaagattctttggtttttcaccccggatgagatcagaaattatttagaaggcccc 183
           |||||||||||||||||||||||   ||||||||||||  ||||  |||||   ||||| 
Sbjct: 208 aaagtaaagattctttggttttttctcccggatgagattcgaaaacatttaagtggccct 267

                                                                       
Query: 184 gtggtggagaatgagatatttcttgcttctggtgatggcactggccttgccgatatcaac 243
           ||  |||| || |||||||||||||||| |||||| |||  ||||||||| |||||||||
Sbjct: 268 gtaatggaaaaggagatatttcttgcttgtggtgaaggcgttggccttgctgatatcaac 327

                                                                       
Query: 244 ccactggaatctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaat 303
           ||||||||| |||||| ||| |||||||| ||  ||||||||||||||||||| ||||||
Sbjct: 328 ccactggaagctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaat 387

                                                                       
Query: 304 cgccagcctaccccaaaggaacaaacggtcgctgattatatcttctataggttttttgat 363
           || || ||| |||| | ||||| | |  | ||||||||||||||||| ||||||||||||
Sbjct: 388 cgtcaaccttcccccagggaactagcaatggctgattatatcttctacaggttttttgat 447

                                                                  
Query: 364 gttggaaactgcacactttctgagcaagtacctgagaaaattgtagggctggaag 418
           |||   |  |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 448 gttaacagttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 502



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 589 atggaggatgaaattcctgttgctgcagttcccctt 624
           ||||||||||||| ||| |||||||||||| |||||
Sbjct: 619 atggaggatgaaagtccagttgctgcagtttccctt 654

---

>dbj|AK102292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089K24, full
           insert sequence
          Length = 2163

 Score =  349 bits (176), Expect = 7e-93
 Identities = 355/415 (85%)
 Strand = Plus / Plus

                                                                       
Query: 4   tccttcacctttgncaatgtgaagtactcactgtatgactgtgtatatctttttaaaaat 63
           |||||||| |||| |||||||||||||||||||||||||  ||||||||||||||| | |
Sbjct: 272 tccttcacatttgacaatgtgaagtactcactgtatgacaatgtatatctttttaagagt 331

                                                                       
Query: 64  ggagaacctgaaccatacattggaaagatagtaaagatatggcagcaaaatgaagctaag 123
           || ||  ||||||| ||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct: 332 ggtgagtctgaaccttacattggaaagataataaagatatggcagcaaaatcaggctaag 391

                                                                       
Query: 124 aaagtaaagattctttggtttttcaccccggatgagatcagaaattatttagaaggcccc 183
           |||||||||||||||||||||||   ||||||||||||  ||||  |||||   ||||| 
Sbjct: 392 aaagtaaagattctttggttttttctcccggatgagattcgaaaacatttaagtggccct 451

                                                                       
Query: 184 gtggtggagaatgagatatttcttgcttctggtgatggcactggccttgccgatatcaac 243
           ||  |||| || |||||||||||||||| |||||| |||  ||||||||| |||||||||
Sbjct: 452 gtaatggaaaaggagatatttcttgcttgtggtgaaggcgttggccttgctgatatcaac 511

                                                                       
Query: 244 ccactggaatctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaat 303
           ||||||||| |||||| ||| |||||||| ||  ||||||||||||||||||| ||||||
Sbjct: 512 ccactggaagctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaat 571

                                                                       
Query: 304 cgccagcctaccccaaaggaacaaacggtcgctgattatatcttctataggttttttgat 363
           || || ||| |||| | ||||| | |  | ||||||||||||||||| ||||||||||||
Sbjct: 572 cgtcaaccttcccccagggaactagcaatggctgattatatcttctacaggttttttgat 631

                                                                  
Query: 364 gttggaaactgcacactttctgagcaagtacctgagaaaattgtagggctggaag 418
           |||   |  |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 632 gttaacagttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 686



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 589 atggaggatgaaattcctgttgctgcagttcccctt 624
           ||||||||||||| ||| |||||||||||| |||||
Sbjct: 803 atggaggatgaaagtccagttgctgcagtttccctt 838

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  230 bits (116), Expect = 4e-57
 Identities = 214/247 (86%)
 Strand = Plus / Plus

                                                                            
Query: 4        tccttcacctttgncaatgtgaagtactcactgtatgactgtgtatatctttttaaaaat 63
                |||||||| |||| |||||||||||||||||||||||||  ||||||||||||||| | |
Sbjct: 24134985 tccttcacatttgacaatgtgaagtactcactgtatgacaatgtatatctttttaagagt 24135044

                                                                            
Query: 64       ggagaacctgaaccatacattggaaagatagtaaagatatggcagcaaaatgaagctaag 123
                || ||  ||||||| ||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct: 24135045 ggtgagtctgaaccttacattggaaagataataaagatatggcagcaaaatcaggctaag 24135104

                                                                            
Query: 124      aaagtaaagattctttggtttttcaccccggatgagatcagaaattatttagaaggcccc 183
                |||||||||||||||||||||||   ||||||||||||  ||||  |||||   ||||| 
Sbjct: 24135105 aaagtaaagattctttggttttttctcccggatgagattcgaaaacatttaagtggccct 24135164

                                                                            
Query: 184      gtggtggagaatgagatatttcttgcttctggtgatggcactggccttgccgatatcaac 243
                ||  |||| || |||||||||||||||| |||||| |||  ||||||||| |||||||||
Sbjct: 24135165 gtaatggaaaaggagatatttcttgcttgtggtgaaggcgttggccttgctgatatcaac 24135224

                       
Query: 244      ccactgg 250
                |||||||
Sbjct: 24135225 ccactgg 24135231



 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                            
Query: 249      ggaatctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaatcgcca 308
                |||| |||||| ||| |||||||| ||  ||||||||||||||||||| |||||||| ||
Sbjct: 24136016 ggaagctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaatcgtca 24136075

                                                                            
Query: 309      gcctaccccaaaggaacaaacggtcgctgattatatcttctataggttttttgatgttgg 368
                 ||| |||| | ||||| | |  | ||||||||||||||||| |||||||||||||||  
Sbjct: 24136076 accttcccccagggaactagcaatggctgattatatcttctacaggttttttgatgttaa 24136135

                                                                  
Query: 369      aaactgcacactttctgagcaagtacctgagaaaattgtagggctggaag 418
                 |  |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 24136136 cagttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 24136185



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 589      atggaggatgaaattcctgttgctgcagttcccctt 624
                ||||||||||||| ||| |||||||||||| |||||
Sbjct: 24136415 atggaggatgaaagtccagttgctgcagtttccctt 24136450

---

>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E03
          Length = 164839

 Score =  230 bits (116), Expect = 4e-57
 Identities = 214/247 (86%)
 Strand = Plus / Plus

                                                                          
Query: 4      tccttcacctttgncaatgtgaagtactcactgtatgactgtgtatatctttttaaaaat 63
              |||||||| |||| |||||||||||||||||||||||||  ||||||||||||||| | |
Sbjct: 110807 tccttcacatttgacaatgtgaagtactcactgtatgacaatgtatatctttttaagagt 110866

                                                                          
Query: 64     ggagaacctgaaccatacattggaaagatagtaaagatatggcagcaaaatgaagctaag 123
              || ||  ||||||| ||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct: 110867 ggtgagtctgaaccttacattggaaagataataaagatatggcagcaaaatcaggctaag 110926

                                                                          
Query: 124    aaagtaaagattctttggtttttcaccccggatgagatcagaaattatttagaaggcccc 183
              |||||||||||||||||||||||   ||||||||||||  ||||  |||||   ||||| 
Sbjct: 110927 aaagtaaagattctttggttttttctcccggatgagattcgaaaacatttaagtggccct 110986

                                                                          
Query: 184    gtggtggagaatgagatatttcttgcttctggtgatggcactggccttgccgatatcaac 243
              ||  |||| || |||||||||||||||| |||||| |||  ||||||||| |||||||||
Sbjct: 110987 gtaatggaaaaggagatatttcttgcttgtggtgaaggcgttggccttgctgatatcaac 111046

                     
Query: 244    ccactgg 250
              |||||||
Sbjct: 111047 ccactgg 111053



 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                          
Query: 249    ggaatctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaatcgcca 308
              |||| |||||| ||| |||||||| ||  ||||||||||||||||||| |||||||| ||
Sbjct: 111838 ggaagctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaatcgtca 111897

                                                                          
Query: 309    gcctaccccaaaggaacaaacggtcgctgattatatcttctataggttttttgatgttgg 368
               ||| |||| | ||||| | |  | ||||||||||||||||| |||||||||||||||  
Sbjct: 111898 accttcccccagggaactagcaatggctgattatatcttctacaggttttttgatgttaa 111957

                                                                
Query: 369    aaactgcacactttctgagcaagtacctgagaaaattgtagggctggaag 418
               |  |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 111958 cagttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 112007



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 589    atggaggatgaaattcctgttgctgcagttcccctt 624
              ||||||||||||| ||| |||||||||||| |||||
Sbjct: 112237 atggaggatgaaagtccagttgctgcagtttccctt 112272

---

>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3,
             complete sequence
          Length = 97738

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 249   ggaatctattgctggtaaatgcacagttgtttgcatttcaaagga 293
             |||| |||||||||| |||||||  ||||||||||||||||||||
Sbjct: 39899 ggaagctattgctggaaaatgcaatgttgtttgcatttcaaagga 39855

---

>gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete sequence
          Length = 130703

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 249    ggaatctattgctggtaaatgcacagttgtttgcatttcaaagga 293
              ||||||||||||||| |||||||   ||||||||||||| |||||
Sbjct: 128740 ggaatctattgctggaaaatgcaacattgtttgcatttctaagga 128784

---

>emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, complete sequence
          Length = 212403

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    tgcacagttgtttgcatttca 288
              |||||||||||||||||||||
Sbjct: 151797 tgcacagttgtttgcatttca 151777

---

>gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete sequence
          Length = 198005

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 56     ttaaaaatggagaacctgaac 76
              |||||||||||||||||||||
Sbjct: 158293 ttaaaaatggagaacctgaac 158313

---

>emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in linkage group 18,
              complete sequence
          Length = 182116

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 268    tgcacagttgtttgcatttca 288
              |||||||||||||||||||||
Sbjct: 126495 tgcacagttgtttgcatttca 126515

---

>emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chromosome 11, complete
             sequence
          Length = 210163

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 124   aaagtaaagattctttggtttttca 148
             |||| ||||||||||||||||||||
Sbjct: 37121 aaaggaaagattctttggtttttca 37145

---

>emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chromosome X, complete
             sequence
          Length = 201897

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   gcttctggtgatggcactggc 228
             |||||||||||||||||||||
Sbjct: 48397 gcttctggtgatggcactggc 48417

---

>ref|NM_117262.2| Arabidopsis thaliana signal transducer AT4G11920 mRNA, complete cds
          Length = 1895

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 203  ttcttgcttctggtgatggcactg 226
            ||||||||||||||| ||||||||
Sbjct: 1171 ttcttgcttctggtggtggcactg 1194

---

>gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, complete sequence
          Length = 200303

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tgtatatctttttaaaaatg 64
              ||||||||||||||||||||
Sbjct: 192735 tgtatatctttttaaaaatg 192754

---

>gb|AY233385.1| Zygophyllum atriplicoides tRNA-Leu (trnL) gene, intron; chloroplast
           gene for chloroplast product
          Length = 430

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 365 tatatctttttaaaaatgga 384

---

>gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome 13, complete sequence
          Length = 208578

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tgtatatctttttaaaaatg 64
             ||||||||||||||||||||
Sbjct: 42097 tgtatatctttttaaaaatg 42116

---

>gb|AC102285.7| Mus musculus chromosome 19, clone RP24-329P13, complete sequence
          Length = 174894

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 602   ttcctgttgctgcagttccc 621
             ||||||||||||||||||||
Sbjct: 24990 ttcctgttgctgcagttccc 25009

---

>gb|AY300791.1| Zygophyllum rosowii chloroplast tRNA-Leu gene, intron
          Length = 416

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 346 tatatctttttaaaaatgga 365

---

>gb|AY300787.1| Zygophyllum gontscharovii chloroplast tRNA-Leu gene, intron
          Length = 418

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 353 tatatctttttaaaaatgga 372

---

>gb|AY300781.1| Roepera morgsana chloroplast tRNA-Leu gene, intron
          Length = 385

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 320 tatatctttttaaaaatgga 339

---

>gb|AY300780.1| Roepera leptopetala chloroplast tRNA-Leu gene, intron
          Length = 393

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 328 tatatctttttaaaaatgga 347

---

>gb|AY300779.1| Roepera iodocarpa chloroplast tRNA-Leu gene, intron
          Length = 382

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 317 tatatctttttaaaaatgga 336

---

>gb|AY300778.1| Roepera foetida chloroplast tRNA-Leu gene, intron
          Length = 392

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 327 tatatctttttaaaaatgga 346

---

>gb|AY300776.1| Roepera compressa chloroplast tRNA-Leu gene, intron
          Length = 382

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 317 tatatctttttaaaaatgga 336

---

>gb|AC147048.2| Mus musculus BAC clone RP23-91H23 from chromosome 8, complete sequence
          Length = 124152

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   tgttggaaactgcacacttt 382
             ||||||||||||||||||||
Sbjct: 81006 tgttggaaactgcacacttt 81025

---

>gb|AC160517.3| Mus musculus chromosome 8, clone RP23-279A11, complete sequence
          Length = 169477

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tgtatatctttttaaaaatg 64
             ||||||||||||||||||||
Sbjct: 42380 tgtatatctttttaaaaatg 42399

---

>gb|AC145425.5| Homo sapiens 3 BAC RP11-411F5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 135894

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   aaaatgaagctaagaaagtaaaga 133
             ||||||||||||||||||| ||||
Sbjct: 23490 aaaatgaagctaagaaagtgaaga 23513

---

>gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, complete sequence
          Length = 208461

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 602    ttcctgttgctgcagttccc 621
              ||||||||||||||||||||
Sbjct: 195118 ttcctgttgctgcagttccc 195137

---

>gb|AC131786.3| Mus musculus BAC clone RP24-397H7 from chromosome 5, complete sequence
          Length = 176338

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gtatatctttttaaaaatgg 65
             ||||||||||||||||||||
Sbjct: 66152 gtatatctttttaaaaatgg 66133

---

>gb|AY233384.1| Roepera apiculata tRNA-Leu (trnL) gene, intron; chloroplast gene
           for chloroplast product
          Length = 387

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 322 tatatctttttaaaaatgga 341

---

>emb|AL592435.2| Human DNA sequence from clone RP11-77M5 on chromosome 1 Contains a
             novel gene, the 5' end of a novel gene and the CDCA1 gene
             for cell division cycle associated 1, complete sequence
          Length = 161679

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   tggaatctattgctggtaaa 267
             ||||||||||||||||||||
Sbjct: 53971 tggaatctattgctggtaaa 53952

---

>emb|AL138969.16| Human DNA sequence from clone RP1-110C15 on chromosome X, complete
             sequence
          Length = 144658

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    cactgtatgactgtgtatat 51
             ||||||||||||||||||||
Sbjct: 75635 cactgtatgactgtgtatat 75654

---

>emb|AL138756.23| Human DNA sequence from clone RP11-4O1 on chromosome 9q31.3-33.1 Contains
              the 3' end of gene DKFZP761E1824, complete sequence
          Length = 189156

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    aattgtagggctggaagtca 421
              ||||||||||||||||||||
Sbjct: 147001 aattgtagggctggaagtca 146982

---

>gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, complete genome
          Length = 131526

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    ggaaactgcacactttctga 386
              ||||||||||||||||||||
Sbjct: 126103 ggaaactgcacactttctga 126084

---

>gb|AY091235.1| Arabidopsis thaliana putative Srw1 protein (At4g11920) mRNA, complete
            cds
          Length = 1459

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 203  ttcttgcttctggtgatggcactg 226
            ||||||||||||||| ||||||||
Sbjct: 1046 ttcttgcttctggtggtggcactg 1069

---

>gb|AY063875.1| Arabidopsis thaliana putative Srw1 protein (At4g11920) mRNA, complete
            cds
          Length = 1911

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 203  ttcttgcttctggtgatggcactg 226
            ||||||||||||||| ||||||||
Sbjct: 1171 ttcttgcttctggtggtggcactg 1194

---

>emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 33
          Length = 190026

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 203   ttcttgcttctggtgatggcactg 226
             ||||||||||||||| ||||||||
Sbjct: 18531 ttcttgcttctggtggtggcactg 18508

---

>emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, BAC clone T26M18 (ESSA project)
          Length = 90824

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 203   ttcttgcttctggtgatggcactg 226
             ||||||||||||||| ||||||||
Sbjct: 75019 ttcttgcttctggtggtggcactg 74996

---

>emb|AJ630364.1| Canis familiaris major histocompatibility complex class II region on
             chromosome CFA12, partial sequence, BAC clone 58o15,
             containing DLA-DRB1 and RPS27 pseudogenes, DLA-DOB, TAP2,
             PSMB8, TAP1 and PSMB9 genes, and RPS15A and ATP6V0D2
             pseudogenes
          Length = 139950

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    atatctttttaaaaatggag 67
             ||||||||||||||||||||
Sbjct: 93335 atatctttttaaaaatggag 93354

---

>gb|AC103560.2| Homo sapiens chromosome 3 clone RP11-673E20, complete sequence
          Length = 186241

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     cactgtatgactgtgtatatcttt 55
              |||||||||||||||||| |||||
Sbjct: 125405 cactgtatgactgtgtatgtcttt 125428

---

>gb|AC024102.19| Homo sapiens 3 BAC RP11-252O10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148163

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    cactgtatgactgtgtatatcttt 55
             |||||||||||||||||| |||||
Sbjct: 13053 cactgtatgactgtgtatgtcttt 13076

---

>gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 162919

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   ttggaaactgcacactttct 384
             ||||||||||||||||||||
Sbjct: 97005 ttggaaactgcacactttct 96986

---

>gb|AC079768.8| Homo sapiens BAC clone RP11-205M3 from 4, complete sequence
          Length = 134004

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tgtgtatatctttttaaaaa 62
             ||||||||||||||||||||
Sbjct: 19816 tgtgtatatctttttaaaaa 19797

---

>gb|AC152161.4| Mus musculus chromosome 19, clone RP23-162O21, complete sequence
          Length = 194652

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 602    ttcctgttgctgcagttccc 621
              ||||||||||||||||||||
Sbjct: 114899 ttcctgttgctgcagttccc 114918

---

>emb|BX826598.1|CNS0A42I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB45ZF08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1713

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 203  ttcttgcttctggtgatggcactg 226
            ||||||||||||||| ||||||||
Sbjct: 1160 ttcttgcttctggtggtggcactg 1183

---

>gb|AC109354.4| Homo sapiens BAC clone RP11-536N13 from 2, complete sequence
          Length = 34533

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cactgtatgactgtgtatat 51
            ||||||||||||||||||||
Sbjct: 9790 cactgtatgactgtgtatat 9771

---

>gb|AC013445.8| Homo sapiens BAC clone RP11-489J10 from 2, complete sequence
          Length = 183960

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    tatttcttgcttctggtgat 219
              ||||||||||||||||||||
Sbjct: 100022 tatttcttgcttctggtgat 100041

---

>gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, complete sequence
          Length = 171468

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tatggcagcaaaatgaagct 120
             ||||||||||||||||||||
Sbjct: 44102 tatggcagcaaaatgaagct 44121

---

>gb|AC084499.1|CBRG12M22 Caenorhabditis briggsae cosmid G12M22, complete sequence
          Length = 35466

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    atctttttaaaaatggagaa 69
             ||||||||||||||||||||
Sbjct: 16287 atctttttaaaaatggagaa 16306

---

>gb|AC116764.10| Mus musculus chromosome 15, clone RP23-388P12, complete sequence
          Length = 217156

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    atttcttgcttctggtgatg 220
              ||||||||||||||||||||
Sbjct: 182757 atttcttgcttctggtgatg 182776

---

>gb|AC009044.3|AC009044 Homo sapiens chromosome 16 clone RP11-190D6, complete sequence
          Length = 167195

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   caggatgtgcaaggcatgaa 488
             ||||||||||||||||||||
Sbjct: 61081 caggatgtgcaaggcatgaa 61100

---

>gb|AC140552.3| Mus musculus BAC clone RP24-372G15 from 8, complete sequence
          Length = 130431

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    tgttggaaactgcacacttt 382
              ||||||||||||||||||||
Sbjct: 126513 tgttggaaactgcacacttt 126532

---

>emb|CT737308.2| Pan troglodytes chromosome X clone CH251-63C08 map Xq28, complete
              sequence
          Length = 166183

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     cactgtatgactgtgtatat 51
              ||||||||||||||||||||
Sbjct: 138369 cactgtatgactgtgtatat 138388

---

>emb|CT737235.2| Pan troglodytes chromosome X clone PTB-029K08 map Xq28, complete
             sequence
          Length = 179483

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    cactgtatgactgtgtatat 51
             ||||||||||||||||||||
Sbjct: 37880 cactgtatgactgtgtatat 37899

---

>dbj|AP002961.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-2I22, complete
              sequence
          Length = 157903

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tgtatatctttttaaaaatg 64
              ||||||||||||||||||||
Sbjct: 113910 tgtatatctttttaaaaatg 113929

---

>emb|AL845418.17| Mouse DNA sequence from clone RP23-207F4 on chromosome 2, complete
              sequence
          Length = 165376

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 395    ctgagaaaattgtagggctggaag 418
              ||||||||||||||||| ||||||
Sbjct: 132702 ctgagaaaattgtagggatggaag 132725

---

>gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone  hRPK.264_B_14, complete sequence
          Length = 120187

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   ctgttgcaccctttctgcaa 576
             ||||||||||||||||||||
Sbjct: 56502 ctgttgcaccctttctgcaa 56483

---

>gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complete sequence
          Length = 228955

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   tgttggaaactgcacacttt 382
             ||||||||||||||||||||
Sbjct: 48360 tgttggaaactgcacacttt 48379

---

>gb|AF051897.1|AF051897 Oryctolagus cuniculus sterol carrier protein X (SCP2) mRNA, complete
            cds
          Length = 2661

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  gcacagttgtttgcatttca 288
            ||||||||||||||||||||
Sbjct: 1906 gcacagttgtttgcatttca 1887

---

>gb|AC171004.2| Mus musculus BAC clone RP23-67N16 from chromosome 13, complete sequence
          Length = 213660

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tgtatatctttttaaaaatg 64
              ||||||||||||||||||||
Sbjct: 164550 tgtatatctttttaaaaatg 164569

---

>emb|AJ387973.1|ZRU387973 Zygophyllum hirticaule chloroplast tRNA-Leu intron and trnL-trnF
           intergenic spacer
          Length = 726

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 320 tatatctttttaaaaatgga 339

---

>emb|AJ387970.1|ZGL387970 Zygophyllum glaucum chloroplast tRNA-Leu intron and trnL-trnF
           intergenic spacer
          Length = 705

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  tatatctttttaaaaatgga 66
           ||||||||||||||||||||
Sbjct: 328 tatatctttttaaaaatgga 347

---

>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete
              sequence
          Length = 151967

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 23     tgaagtactcactgtatgactgtgtata 50
              |||||||||| ||| |||||||||||||
Sbjct: 131673 tgaagtactcgctgaatgactgtgtata 131700

---

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 602    ttcctgttgctgcagttccc 621
              ||||||||||||||||||||
Sbjct: 781920 ttcctgttgctgcagttccc 781939


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,496,896
Number of Sequences: 3902068
Number of extensions: 7496896
Number of successful extensions: 148814
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148597
Number of HSP's gapped (non-prelim): 205
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---