Clone Name | baalh08 |
---|---|
Clone Library Name | barley_pub |
>MT3_MUSAC (Q40256) Metallothionein-like protein type 3 (MT-3) (MWMT3)| Length = 65 Score = 38.5 bits (88), Expect(2) = 1e-04 Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 4/34 (11%) Frame = +2 Query: 62 QCVKKGDSYGIVMVDTEKSHLE----VHETAEND 151 QCVKKG+SYGI +V+TEKS+++ E AE+D Sbjct: 14 QCVKKGNSYGIDIVETEKSYVDEVIVAAEAAEHD 47 Score = 26.2 bits (56), Expect(2) = 1e-04 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +1 Query: 31 CGNCDCADK 57 CGNCDC DK Sbjct: 4 CGNCDCVDK 12
>MT3_CARPA (Q96386) Metallothionein-like protein type 3 (MT-3)| Length = 65 Score = 32.0 bits (71), Expect(2) = 3e-04 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 19 MADKCGNCDCADK 57 M+D CGNCDCADK Sbjct: 1 MSDTCGNCDCADK 13 Score = 31.6 bits (70), Expect(2) = 3e-04 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 3/33 (9%) Frame = +2 Query: 62 QCVKKGDSYGIVMVDTEKSHLEV---HETAEND 151 QCVKKG SY +++TEKS + V AEND Sbjct: 15 QCVKKGSSYTADIIETEKSIMTVVMDAPAAEND 47
>MT3_ACTCH (P43389) Metallothionein-like protein type 3 PKIWI503| Length = 63 Score = 32.3 bits (72), Expect(2) = 0.004 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +1 Query: 19 MADKCGNCDCAD 54 M+DKCGNCDCAD Sbjct: 1 MSDKCGNCDCAD 12 Score = 27.3 bits (59), Expect(2) = 0.004 Identities = 13/22 (59%), Positives = 19/22 (86%) Frame = +2 Query: 62 QCVKKGDSYGIVMVDTEKSHLE 127 QCVKKG+S I +V+T+KS++E Sbjct: 15 QCVKKGNS--IDIVETDKSYIE 34
>MT3_MALDO (O24059) Metallothionein-like protein type 3 (MT-3)| Length = 66 Score = 31.6 bits (70), Expect(2) = 0.008 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = +2 Query: 62 QCVKKGDSYGIVMVDTEKSHLE 127 QCVKKG+SY +V+V+TE ++ Sbjct: 15 QCVKKGNSYDLVIVETENRSMD 36 Score = 26.9 bits (58), Expect(2) = 0.008 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +1 Query: 19 MADKCGNCDCAD 54 M+ KC NCDCAD Sbjct: 1 MSGKCDNCDCAD 12
>MT3_PRUAV (O48951) Metallothionein-like protein 1 (MT-1)| Length = 64 Score = 26.9 bits (58), Expect(2) = 0.21 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +2 Query: 62 QCVKKGDSYGIVMVDTEKSHLE 127 QC KKG S+ +V+V+TE ++ Sbjct: 15 QCTKKGYSFDLVIVETENRSMD 36 Score = 26.6 bits (57), Expect(2) = 0.21 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 19 MADKCGNCDCAD 54 M+ KC NCDC+D Sbjct: 1 MSSKCSNCDCSD 12
>GLYA_BRUSU (Q8G1F1) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 438 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 473 EMKSHATTRTSSA-HNHIVIVVQT*SSATGYRGTRDRGRSDILCTHHQLSF 324 E+KSH S NH+++V +ATG R GR++I C + + F Sbjct: 312 ELKSHGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPF 362
>GLYA_BRUME (Q8YGG7) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 438 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 473 EMKSHATTRTSSA-HNHIVIVVQT*SSATGYRGTRDRGRSDILCTHHQLSF 324 E+KSH S NH+++V +ATG R GR++I C + + F Sbjct: 312 ELKSHGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPF 362
>GLYA_BRUAB (Q57DY5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 438 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 473 EMKSHATTRTSSA-HNHIVIVVQT*SSATGYRGTRDRGRSDILCTHHQLSF 324 E+KSH S NH+++V +ATG R GR++I C + + F Sbjct: 312 ELKSHGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPF 362
>GLYA_BRUA2 (Q2YN95) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 438 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 473 EMKSHATTRTSSA-HNHIVIVVQT*SSATGYRGTRDRGRSDILCTHHQLSF 324 E+KSH S NH+++V +ATG R GR++I C + + F Sbjct: 312 ELKSHGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPF 362
>MT3_PICGL (Q40854) Metallothionein-like protein EMB30| Length = 60 Score = 29.6 bits (65), Expect = 5.4 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +1 Query: 19 MADKCGNCDCADK 57 M+ CGNCDCADK Sbjct: 1 MSSDCGNCDCADK 13 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,446,160 Number of Sequences: 219361 Number of extensions: 955808 Number of successful extensions: 2190 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2190 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)