Clone Name | baalh20 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_196313.1| Oryza sativa (japonica cultivar-group) putative protein-tyrosine-phosphatase (OSJNBa0011L09.21), mRNA Length = 1134 Score = 355 bits (179), Expect = 1e-94 Identities = 351/407 (86%), Gaps = 1/407 (0%) Strand = Plus / Plus Query: 197 atcatcgtctccggggacccgcccacgttcgtctccgcccccggccgccgcattgtcgct 256 |||| |||| |||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 211 atcaccgtcgccggtgacccgcccacgttcgtcaccgcgcccggccgccgcatcgtcgcc 270 Query: 257 gttggggacctccatggtgatctccaccaaacgagggctgctctagtgatggccggcgtc 316 || || |||||||| |||||||| ||||||||||||| || ||||||||||| || || Sbjct: 271 gtcggtgacctccacggtgatctaaaccaaacgagggcggcgctagtgatggctggtctc 330 Query: 317 ctgagcgcggaatcagattgtcatgtgtggacaggcgggcagacggttctggttcaagtt 376 |||||| ||||||| ||| | ||||| |||||||| ||||||||||| |||||||||||| Sbjct: 331 ctgagctcggaatcggatggccatgtatggacaggagggcagacggtgctggttcaagtt 390 Query: 377 ggggatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcactg 436 || |||||||||||||| || |||||||||||||| ||||| || || || ||||||||| Sbjct: 391 ggagatatccttgaccgtggcgaagatgaaatcgcgatactatctctcttaagttcactg 450 Query: 437 aatgtgcaagcaaaatctcaaggcggtgctgtgtttcaggtaaacgggaatcatgaaacc 496 ||| |||| || ||||||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 451 aatatgcaggcgaaatctcaagggggtgctgtgtttcaggttaatggaaatcacgaaacc 510 Query: 497 atgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgatgagtgtatacgc 556 || ||||||||||| |||| ||||| || ||||||||| ||||||| ||||| |||||| Sbjct: 511 ataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgcatacgc 570 Query: 557 ttcctggaatacctggaggaaatttgatggcaactgggatgatgctt 603 ||| |||| || |||| | ||| ||||||||||||||||||||||| Sbjct: 571 ttcatggagtatttggatg-aatgtgatggcaactgggatgatgctt 616
>dbj|AK066208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058D12, full insert sequence Length = 1984 Score = 355 bits (179), Expect = 1e-94 Identities = 351/407 (86%), Gaps = 1/407 (0%) Strand = Plus / Plus Query: 197 atcatcgtctccggggacccgcccacgttcgtctccgcccccggccgccgcattgtcgct 256 |||| |||| |||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 322 atcaccgtcgccggtgacccgcccacgttcgtcaccgcgcccggccgccgcatcgtcgcc 381 Query: 257 gttggggacctccatggtgatctccaccaaacgagggctgctctagtgatggccggcgtc 316 || || |||||||| |||||||| ||||||||||||| || ||||||||||| || || Sbjct: 382 gtcggtgacctccacggtgatctaaaccaaacgagggcggcgctagtgatggctggtctc 441 Query: 317 ctgagcgcggaatcagattgtcatgtgtggacaggcgggcagacggttctggttcaagtt 376 |||||| ||||||| ||| | ||||| |||||||| ||||||||||| |||||||||||| Sbjct: 442 ctgagctcggaatcggatggccatgtatggacaggagggcagacggtgctggttcaagtt 501 Query: 377 ggggatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcactg 436 || |||||||||||||| || |||||||||||||| ||||| || || || ||||||||| Sbjct: 502 ggagatatccttgaccgtggcgaagatgaaatcgcgatactatctctcttaagttcactg 561 Query: 437 aatgtgcaagcaaaatctcaaggcggtgctgtgtttcaggtaaacgggaatcatgaaacc 496 ||| |||| || ||||||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 562 aatatgcaggcgaaatctcaagggggtgctgtgtttcaggttaatggaaatcacgaaacc 621 Query: 497 atgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgatgagtgtatacgc 556 || ||||||||||| |||| ||||| || ||||||||| ||||||| ||||| |||||| Sbjct: 622 ataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgcatacgc 681 Query: 557 ttcctggaatacctggaggaaatttgatggcaactgggatgatgctt 603 ||| |||| || |||| | ||| ||||||||||||||||||||||| Sbjct: 682 ttcatggagtatttggatg-aatgtgatggcaactgggatgatgctt 727
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 365 ctggttcaagttggggatatccttgaccggggagaagatgaaatcgcaatactgtccctg 424 |||||||||||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 126431 ctggttcaagttggagatatccttgaccgtggcgaagatgaaatcgcgatactatctctc 126490 Query: 425 ttgagttcactgaatgtgcaagcaaaatctcaaggcggtgctgtgtttcaggta 478 || |||||||||||| |||| || ||||||||||| |||||||||||||||||| Sbjct: 126491 ttaagttcactgaatatgcaggcgaaatctcaagggggtgctgtgtttcaggta 126544 Score = 93.7 bits (47), Expect = 6e-16 Identities = 102/119 (85%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 485 aatcatgaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgat 544 ||||| |||||||| ||||||||||| |||| ||||| || ||||||||| ||||||| Sbjct: 126642 aatcacgaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgac 126701 Query: 545 gagtgtatacgcttcctggaatacctggaggaaatttgatggcaactgggatgatgctt 603 ||||| ||||||||| |||| || |||| | ||| ||||||||||||||||||||||| Sbjct: 126702 gagtgcatacgcttcatggagtatttggatg-aatgtgatggcaactgggatgatgctt 126759 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 263 gacctccatggtgatctccaccaaacgagggctgctctagtgatggccggcgtcctgagc 322 |||||||| |||||||| ||||||||||||| || ||||||||||| || |||||||| Sbjct: 126008 gacctccacggtgatctaaaccaaacgagggcggcgctagtgatggctggtctcctgagc 126067 Query: 323 gcggaatcagattgtcatgtgtggacaggcgggcagacggt 363 ||||||| ||| | ||||| |||||||| ||||||||||| Sbjct: 126068 tcggaatcggatggccatgtatggacaggagggcagacggt 126108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 197 atcatcgtctccggggacccgcccacgttcgtctccgcccccggccgccgcattgtcgc 255 |||| |||| |||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 125085 atcaccgtcgccggtgacccgcccacgttcgtcaccgcgcccggccgccgcatcgtcgc 125143
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 365 ctggttcaagttggggatatccttgaccggggagaagatgaaatcgcaatactgtccctg 424 |||||||||||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 12637131 ctggttcaagttggagatatccttgaccgtggcgaagatgaaatcgcgatactatctctc 12637072 Query: 425 ttgagttcactgaatgtgcaagcaaaatctcaaggcggtgctgtgtttcaggta 478 || |||||||||||| |||| || ||||||||||| |||||||||||||||||| Sbjct: 12637071 ttaagttcactgaatatgcaggcgaaatctcaagggggtgctgtgtttcaggta 12637018 Score = 93.7 bits (47), Expect = 6e-16 Identities = 102/119 (85%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 485 aatcatgaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgat 544 ||||| |||||||| ||||||||||| |||| ||||| || ||||||||| ||||||| Sbjct: 12636920 aatcacgaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgac 12636861 Query: 545 gagtgtatacgcttcctggaatacctggaggaaatttgatggcaactgggatgatgctt 603 ||||| ||||||||| |||| || |||| | ||| ||||||||||||||||||||||| Sbjct: 12636860 gagtgcatacgcttcatggagtatttggatg-aatgtgatggcaactgggatgatgctt 12636803 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 263 gacctccatggtgatctccaccaaacgagggctgctctagtgatggccggcgtcctgagc 322 |||||||| |||||||| ||||||||||||| || ||||||||||| || |||||||| Sbjct: 12637554 gacctccacggtgatctaaaccaaacgagggcggcgctagtgatggctggtctcctgagc 12637495 Query: 323 gcggaatcagattgtcatgtgtggacaggcgggcagacggt 363 ||||||| ||| | ||||| |||||||| ||||||||||| Sbjct: 12637494 tcggaatcggatggccatgtatggacaggagggcagacggt 12637454 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 197 atcatcgtctccggggacccgcccacgttcgtctccgcccccggccgccgcattgtcgc 255 |||| |||| |||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 12638477 atcaccgtcgccggtgacccgcccacgttcgtcaccgcgcccggccgccgcatcgtcgc 12638419
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 365 ctggttcaagttggggatatccttgaccggggagaagatgaaatcgcaatactgtccctg 424 |||||||||||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 12644471 ctggttcaagttggagatatccttgaccgtggcgaagatgaaatcgcgatactatctctc 12644412 Query: 425 ttgagttcactgaatgtgcaagcaaaatctcaaggcggtgctgtgtttcaggta 478 || |||||||||||| |||| || ||||||||||| |||||||||||||||||| Sbjct: 12644411 ttaagttcactgaatatgcaggcgaaatctcaagggggtgctgtgtttcaggta 12644358 Score = 93.7 bits (47), Expect = 6e-16 Identities = 102/119 (85%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 485 aatcatgaaaccatgaatgtggaaggtgatttccggtacgtcgatccaggatcatttgat 544 ||||| |||||||| ||||||||||| |||| ||||| || ||||||||| ||||||| Sbjct: 12644260 aatcacgaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgac 12644201 Query: 545 gagtgtatacgcttcctggaatacctggaggaaatttgatggcaactgggatgatgctt 603 ||||| ||||||||| |||| || |||| | ||| ||||||||||||||||||||||| Sbjct: 12644200 gagtgcatacgcttcatggagtatttggatg-aatgtgatggcaactgggatgatgctt 12644143 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 263 gacctccatggtgatctccaccaaacgagggctgctctagtgatggccggcgtcctgagc 322 |||||||| |||||||| ||||||||||||| || ||||||||||| || |||||||| Sbjct: 12644894 gacctccacggtgatctaaaccaaacgagggcggcgctagtgatggctggtctcctgagc 12644835 Query: 323 gcggaatcagattgtcatgtgtggacaggcgggcagacggt 363 ||||||| ||| | ||||| |||||||| ||||||||||| Sbjct: 12644834 tcggaatcggatggccatgtatggacaggagggcagacggt 12644794 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 197 atcatcgtctccggggacccgcccacgttcgtctccgcccccggccgccgcattgtcgc 255 |||| |||| |||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 12645817 atcaccgtcgccggtgacccgcccacgttcgtcaccgcgcccggccgccgcatcgtcgc 12645759
>emb|CT033764.1| Medicago truncatula chromosome 5 clone mth2-62e18, COMPLETE SEQUENCE Length = 127491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 474 aggtaaacgggaatcatgaaaccatgaatgtggaaggtgatttc 517 ||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 57285 aggtaaatggaaaccatgaaaccatgaatgtggaaggggatttc 57328
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 245 cgcattgtcgctgttggggacctc 268 |||||||||||||||||||||||| Sbjct: 523885 cgcattgtcgctgttggggacctc 523862
>gb|BC033140.1| Homo sapiens thrombospondin, type I, domain containing 3, mRNA (cDNA clone IMAGE:3844836), partial cds Length = 2783 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 1858 gtcccagcaggcagcagaggga 1837
>emb|AL133257.17| Human DNA sequence from clone RP1-166D18 on chromosome 6q22.1-22.33 Contains part of the TRDN gene for triadin (TDN, TRIADIN), complete sequence Length = 130748 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 560 ctggaatacctggaggaaattt 581 |||||||||||||||||||||| Sbjct: 7259 ctggaatacctggaggaaattt 7238
>gb|BC101019.1| Homo sapiens thrombospondin, type I, domain containing 3, mRNA (cDNA clone MGC:119414 IMAGE:40007143), complete cds Length = 2096 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2040 gtcccagcaggcagcagaggga 2019
>gb|BC101022.1| Homo sapiens thrombospondin, type I, domain containing 3, mRNA (cDNA clone MGC:119417 IMAGE:40007147), complete cds Length = 2096 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2040 gtcccagcaggcagcagaggga 2019
>gb|BC101020.1| Homo sapiens thrombospondin, type I, domain containing 3, mRNA (cDNA clone MGC:119415 IMAGE:40007145), complete cds Length = 2096 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2040 gtcccagcaggcagcagaggga 2019
>emb|CR749863.1| Homo sapiens mRNA; cDNA DKFZp686E0215 (from clone DKFZp686E0215) Length = 3009 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2040 gtcccagcaggcagcagaggga 2019
>emb|CR621416.1| full-length cDNA clone CS0DI085YH01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 989 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 86 gtcccagcaggcagcagaggga 65
>emb|CR618365.1| full-length cDNA clone CS0DI014YE07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1386 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 512 gtcccagcaggcagcagaggga 491
>emb|CR609209.1| full-length cDNA clone CS0DI066YI17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1980 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 1130 gtcccagcaggcagcagaggga 1109
>emb|CR604661.1| full-length cDNA clone CS0DI009YJ17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1627 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 768 gtcccagcaggcagcagaggga 747
>emb|CR606820.1| full-length cDNA clone CS0DI066YF03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1309 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 431 gtcccagcaggcagcagaggga 410
>emb|CR606304.1| full-length cDNA clone CS0DE014YF13 of Placenta of Homo sapiens (human) Length = 1336 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 433 gtcccagcaggcagcagaggga 412
>dbj|AK075445.1| Homo sapiens cDNA PSEC0137 fis, clone PLACE1005047 Length = 2981 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2074 gtcccagcaggcagcagaggga 2053
>emb|CR601544.1| full-length cDNA clone CS0DI033YN19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1419 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 544 gtcccagcaggcagcagaggga 523
>dbj|AK056709.1| Homo sapiens cDNA FLJ32147 fis, clone PLACE5000116 Length = 3052 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2145 gtcccagcaggcagcagaggga 2124
>emb|CR597238.1| full-length cDNA clone CS0DI085YF10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1392 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 530 gtcccagcaggcagcagaggga 509
>emb|CR593679.1| full-length cDNA clone CS0DI009YL19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1632 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 768 gtcccagcaggcagcagaggga 747
>gb|AE012239.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 147 of 460 of the complete genome Length = 11095 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 gctgcggctgcgcacggcggcc 94 |||||||||||||||||||||| Sbjct: 2631 gctgcggctgcgcacggcggcc 2652
>emb|AJ583024.1| Homo sapiens mRNA for Tail1 protein Length = 2883 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2041 gtcccagcaggcagcagaggga 2020
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 gctgcggctgcgcacggcggcc 94 |||||||||||||||||||||| Sbjct: 3418406 gctgcggctgcgcacggcggcc 3418385
>ref|NM_199265.1| Homo sapiens thrombospondin, type I, domain containing 3 (THSD3), transcript variant 2, mRNA Length = 3047 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2134 gtcccagcaggcagcagaggga 2113
>ref|NM_182509.2| Homo sapiens thrombospondin, type I, domain containing 3 (THSD3), transcript variant 3, mRNA Length = 2596 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 1683 gtcccagcaggcagcagaggga 1662
>ref|NM_199296.1| Homo sapiens thrombospondin, type I, domain containing 3 (THSD3), transcript variant 1, mRNA Length = 2942 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 2029 gtcccagcaggcagcagaggga 2008
>gb|AF111168.2|AF111168 Homo sapiens serine palmitoyl transferase, subunit II gene, complete cds; and unknown genes Length = 231464 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 77900 gtcccagcaggcagcagaggga 77921
>gb|BC101021.2| Homo sapiens thrombospondin, type I, domain containing 3, mRNA (cDNA clone IMAGE:40007146), complete cds Length = 1739 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gtcccagcaggcagcagaggga 150 |||||||||||||||||||||| Sbjct: 1683 gtcccagcaggcagcagaggga 1662
>ref|XM_482587.1| Oryza sativa (japonica cultivar-group), mRNA Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcagccggggga 193 ||||||||||||||||||||| Sbjct: 200 gcggcggcggcagccggggga 220
>ref|XM_475408.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2427 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcagccggggga 193 ||||||||||||||||||||| Sbjct: 93 gcggcggcggcagccggggga 73
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcagccggggga 193 ||||||||||||||||||||| Sbjct: 50659 gcggcggcggcagccggggga 50639
>ref|NM_176400.1| Drosophila melanogaster CG31534-RB, transcript variant B (CG31534), mRNA Length = 4163 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggatatccttgaccggggag 398 ||||||||||||||||||||| Sbjct: 2188 gggatatccttgaccggggag 2168
>ref|NM_141231.3| Drosophila melanogaster CG31534-RA, transcript variant A (CG31534), mRNA Length = 4058 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggatatccttgaccggggag 398 ||||||||||||||||||||| Sbjct: 2188 gggatatccttgaccggggag 2168
>gb|AY069217.1| Drosophila melanogaster GH26442 full length cDNA Length = 3911 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggatatccttgaccggggag 398 ||||||||||||||||||||| Sbjct: 2165 gggatatccttgaccggggag 2145
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tgcggcggcggcagccggggg 192 ||||||||||||||||||||| Sbjct: 1617357 tgcggcggcggcagccggggg 1617377
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcagccggggga 193 ||||||||||||||||||||| Sbjct: 21273669 gcggcggcggcagccggggga 21273689
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcagccggggga 193 ||||||||||||||||||||| Sbjct: 22851955 gcggcggcggcagccggggga 22851935
>gb|AC008189.3|AC008189 Drosophila melanogaster, chromosome 3R, region 82C-82D, BAC clone BACR02C19, complete sequence Length = 188359 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggatatccttgaccggggag 398 ||||||||||||||||||||| Sbjct: 54122 gggatatccttgaccggggag 54102
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcagccggggga 193 ||||||||||||||||||||| Sbjct: 99946 gcggcggcggcagccggggga 99966
>dbj|AK107904.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F11, full insert sequence Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcagccggggga 193 ||||||||||||||||||||| Sbjct: 200 gcggcggcggcagccggggga 220
>gb|AE003605.3| Drosophila melanogaster chromosome 3R, section 3 of 118 of the complete sequence Length = 273418 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggatatccttgaccggggag 398 ||||||||||||||||||||| Sbjct: 141023 gggatatccttgaccggggag 141003
>dbj|AP003124.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-447G14, complete sequence Length = 177483 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 tgcggcggcggcagccgggggaccg 196 ||||||||| ||||||||||||||| Sbjct: 83635 tgcggcggcagcagccgggggaccg 83659
>gb|U63518.1|SAU63518 Streptomyces arenae malate synthase (aceB) gene, complete cds Length = 3147 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 gcgcacggcggccgtctccgg 102 ||||||||||||||||||||| Sbjct: 1710 gcgcacggcggccgtctccgg 1690
>ref|NM_100574.3| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT1G07010 mRNA, complete cds Length = 1982 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 380 gatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcact 435 ||||| ||||| || || || ||||||||||||||||| ||| | ||||| ||||| Sbjct: 366 gatatacttgatcgcggtgatgatgaaatcgcaatactctccttattgaggtcact 421
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 cgcacggcggccgtctccggcctgacct 110 |||||||||||| ||| ||||||||||| Sbjct: 1219213 cgcacggcggccttcttcggcctgacct 1219186
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tgatggccggcgtcctgagc 322 |||||||||||||||||||| Sbjct: 2446513 tgatggccggcgtcctgagc 2446494
>gb|AF310645.1| Partula mirabilis 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 910 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 450 tcctgccgtgcggcggcggc 431
>gb|AF310644.1| Partula tristis 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 923 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 445 tcctgccgtgcggcggcggc 426
>gb|AF310641.1| Samoana attenuata 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1382 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 418 tcctgccgtgcggcggcggc 399
>gb|AF310640.1| Samoana ganymedes 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1376 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 411 tcctgccgtgcggcggcggc 392
>gb|AF310638.1| Samoana strigata 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1381 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 421 tcctgccgtgcggcggcggc 402
>gb|AF310634.1| Partula langfordi 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1423 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 447 tcctgccgtgcggcggcggc 428
>gb|AF310632.1| Partula radiolata 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1431 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 454 tcctgccgtgcggcggcggc 435
>gb|AF310631.1| Partula suturalis 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1434 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 454 tcctgccgtgcggcggcggc 435
>emb|AM048836.1| Ageratum yellow vein China virus-associated DNA beta c1 gene for SatC1 protein, isolate Hn12 Length = 1324 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1204 ccgatcatcgtctccgggga 1185
>emb|AM048835.1| Ageratum yellow vein China virus-associated DNA beta c1 gene for SatC1 protein, isolate Hn9 Length = 1323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1203 ccgatcatcgtctccgggga 1184
>emb|AM048834.1| Ageratum yellow vein China virus-associated DNA beta c1 gene for SatC1 protein, isolate Hn2 Length = 1323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1203 ccgatcatcgtctccgggga 1184
>emb|AJ971262.1| Ageratum yellow vein China virus-associated DNA beta complete genome, isolate G98 Length = 1322 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1202 ccgatcatcgtctccgggga 1183
>emb|AJ971261.1| Ageratum yellow vein China virus-associated DNA beta complete genome, isolate G96 Length = 1323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1203 ccgatcatcgtctccgggga 1184
>emb|AJ971260.1| Ageratum yellow vein China virus-associated DNA beta complete genome, isolate G95 Length = 1323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1203 ccgatcatcgtctccgggga 1184
>emb|AJ971259.1| Ageratum yellow vein China virus-associated DNA beta complete genome, isolate G86 Length = 1315 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1194 ccgatcatcgtctccgggga 1175
>emb|AJ971258.1| Ageratum yellow vein China virus-associated DNA beta complete genome, isolate G69 Length = 1323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1203 ccgatcatcgtctccgggga 1184
>emb|AJ971257.1| Ageratum yellow vein China virus-associated DNA beta complete genome, isolate G66 Length = 1323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1203 ccgatcatcgtctccgggga 1184
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tgatggccggcgtcctgagc 322 |||||||||||||||||||| Sbjct: 1938045 tgatggccggcgtcctgagc 1938064
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 ggctgcggctgcgcacggcggccg 95 ||||||||||||||||||| |||| Sbjct: 34514 ggctgcggctgcgcacggccgccg 34491
>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of glycopeptide antibiotic A40926, strain ATCC 39727 Length = 89153 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 ttcctggaatacctggagga 576 |||||||||||||||||||| Sbjct: 69176 ttcctggaatacctggagga 69195
>gb|BT008476.1| Arabidopsis thaliana At1g07010 gene, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 380 gatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcact 435 ||||| ||||| || || || ||||||||||||||||| ||| | ||||| ||||| Sbjct: 304 gatatacttgatcgcggtgatgatgaaatcgcaatactctccttattgaggtcact 359
>gb|AY136428.1| Arabidopsis thaliana unknown protein (At1g07010) mRNA, complete cds Length = 1430 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 380 gatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcact 435 ||||| ||||| || || || ||||||||||||||||| ||| | ||||| ||||| Sbjct: 314 gatatacttgatcgcggtgatgatgaaatcgcaatactctccttattgaggtcact 369
>emb|AJ542491.1|TLE542491 Tomato leaf curl virus-associated DNA beta C1 gene, clone l171-1 Length = 1348 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ccgatcatcgtctccgggga 213 |||||||||||||||||||| Sbjct: 1226 ccgatcatcgtctccgggga 1207
>dbj|AK125543.1| Homo sapiens cDNA FLJ43555 fis, clone PROST2018437, highly similar to Homo sapiens RAB35, member RAS oncogene family (RAB35) Length = 2449 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tcaggctgcggctgcgcacggcgg 92 |||||||||||||||||| ||||| Sbjct: 600 tcaggctgcggctgcgcaaggcgg 623
>gb|AY014045.1| Samoana conica 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1385 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 414 tcctgccgtgcggcggcggc 395
>gb|AY014042.1| Partula suturalis 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1459 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 465 tcctgccgtgcggcggcggc 446
>gb|AY014034.1| Buliminus labrosus 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1400 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 428 tcctgccgtgcggcggcggc 409
>gb|AY014026.1| Vallonia eccentrica 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1414 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 445 tcctgccgtgcggcggcggc 426
>gb|AY014025.1| Vallonia costata 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1418 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcctgccgtgcggcggcggc 183 |||||||||||||||||||| Sbjct: 445 tcctgccgtgcggcggcggc 426
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcagccggggg 192 |||||||||||||||||||| Sbjct: 16698915 gcggcggcggcagccggggg 16698896
>emb|BX815748.1|CNS0AANF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZA04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1453 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 380 gatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcact 435 ||||| ||||| || || || ||||||||||||||||| ||| | ||||| ||||| Sbjct: 373 gatatacttgatcgcggtgatgatgaaatcgcaatactctccttattgaggtcact 428
>emb|BX815035.1|CNS0ABDE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1399 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 380 gatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcact 435 ||||| ||||| || || || ||||||||||||||||| ||| | ||||| ||||| Sbjct: 295 gatatacttgatcgcggtgatgatgaaatcgcaatactctccttattgaggtcact 350
>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111464 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 380 gatatccttgaccggggagaagatgaaatcgcaatactgtccctgttgagttcact 435 ||||| ||||| || || || ||||||||||||||||| ||| | ||||| ||||| Sbjct: 88050 gatatacttgatcgcggtgatgatgaaatcgcaatactctccttattgaggtcact 87995
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcagccggggg 192 |||||||||||||||||||| Sbjct: 47609 gcggcggcggcagccggggg 47590
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcagccggggg 192 |||||||||||||||||||| Sbjct: 107054 gcggcggcggcagccggggg 107035
>emb|AL954707.18| Mouse DNA sequence from clone RP23-359C15 on chromosome 2, complete sequence Length = 205927 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 ggtgctgtgtttcaggtaaa 480 |||||||||||||||||||| Sbjct: 159137 ggtgctgtgtttcaggtaaa 159156
>ref|XM_307969.2| Anopheles gambiae str. PEST ENSANGP00000006286 (ENSANGG00000004784), partial mRNA Length = 6147 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 gctgcgcacggcggccgtctccggcctg 106 |||||||| ||||||||||||| ||||| Sbjct: 3171 gctgcgcaaggcggccgtctcctgcctg 3198
>ref|XM_307970.2| Anopheles gambiae str. PEST ENSANGP00000024185 (ENSANGG00000004784), partial mRNA Length = 6312 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 gctgcgcacggcggccgtctccggcctg 106 |||||||| ||||||||||||| ||||| Sbjct: 3375 gctgcgcaaggcggccgtctcctgcctg 3402
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cggccgccgcattgtcgctg 257 |||||||||||||||||||| Sbjct: 1392889 cggccgccgcattgtcgctg 1392870
>gb|AC004812.1|AC004812 Homo sapiens PAC clone 267D11 from 12, complete sequence Length = 138532 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 tcaggctgcggctgcgcacggcgg 92 |||||||||||||||||| ||||| Sbjct: 62955 tcaggctgcggctgcgcaaggcgg 62932
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ccccggccgccgcattgtcg 254 |||||||||||||||||||| Sbjct: 2641263 ccccggccgccgcattgtcg 2641282
>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete sequence Length = 226754 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 caaaatctcaaggcggtgct 466 |||||||||||||||||||| Sbjct: 147908 caaaatctcaaggcggtgct 147927 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,885,127 Number of Sequences: 3902068 Number of extensions: 4885127 Number of successful extensions: 108671 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107464 Number of HSP's gapped (non-prelim): 1202 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)