ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalj24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through... 74 4e-10
2gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase g... 58 3e-05
3gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein... 56 1e-04
4gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 54 4e-04
5gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 54 4e-04
6gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 54 4e-04
7gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99)... 54 4e-04
8gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) ... 54 4e-04
9gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL... 52 0.002
10gb|AY821693.1| Australopyrum velutinum beta amylase gene, partia... 50 0.006
11gb|AY821692.1| Australopyrum retrofractum beta amylase gene, par... 50 0.006
12gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 50 0.006
13gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 50 0.006
14gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 50 0.006
15gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme... 48 0.025
16gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 46 0.099
17gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p... 46 0.099
18gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcript... 46 0.099
19gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex sub... 46 0.099
20gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote... 46 0.099
21gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 46 0.099
22gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) g... 46 0.099
23gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, co... 46 0.099
24dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1... 46 0.099
25gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 44 0.39
26gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 44 0.39
27emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B r... 44 0.39
28gb|AF474923.1| Hordeum vulgare subsp. vulgare chalcone isomerase... 44 0.39
29gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 44 0.39
30emb|CR626934.1| Triticum aestivum 42 1.5
31emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin ... 42 1.5
32gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinas... 42 1.5
33gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds 42 1.5
34emb|AL627125.8| Mouse DNA sequence from clone RP23-466N19 on chr... 42 1.5
35gb|BT023934.1| Drosophila melanogaster RE25404 full insert cDNA 40 6.1
36gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BA... 40 6.1
37gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch s... 40 6.1
38gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosom... 40 6.1
39emb|AL512522.1|SPBPB2B2 S.pombe chromosome II BAC pB2B2 40 6.1
40emb|AL358912.2|SPBC1348 S.pombe chromosome II cosmid c1348 40 6.1
41emb|AL137130.1|SPAC977 S.pombe chromosome I cosmid c977 40 6.1
42emb|BX901942.6| Zebrafish DNA sequence from clone DKEY-121B10 in... 40 6.1
43emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in ... 40 6.1
44gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence 40 6.1
45gb|AC110742.4| Homo sapiens chromosome 11, clone CTD-2026G22, co... 40 6.1
46ref|NM_206727.1| Drosophila melanogaster scalloped CG8544-RC, tr... 40 6.1
47ref|NM_167465.1| Drosophila melanogaster scalloped CG8544-RA, tr... 40 6.1
48ref|NM_078614.3| Drosophila melanogaster scalloped CG8544-RB, tr... 40 6.1
49gb|AC044893.5| Homo sapiens chromosome 8, clone RP11-696E24, com... 40 6.1
50gb|AC008501.5| Homo sapiens chromosome 5 clone CTC-439N6, comple... 40 6.1
51emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in... 40 6.1
52gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, comp... 40 6.1
53gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, r... 40 6.1
54gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, r... 40 6.1
55dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
56gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 40 6.1
57dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
58gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Can... 40 6.1
59emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-8... 40 6.1
60dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
61gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, r... 40 6.1
62gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 ... 40 6.1
63emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-7... 40 6.1
64emb|AL954322.4| Zebrafish DNA sequence from clone CH211-229G11, ... 40 6.1
65emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, comp... 40 6.1
66gb|M83787.1|DROSCLLPD Drosophila melanogaster scalloped protein ... 40 6.1 
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds;
            and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH)
            gene, complete cds
          Length = 13878

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 337  gttcctaaatacaagtctttttagagattacactacggactacgtacatagtaaaat 393
            ||||||||||| ||||||||||||||||||||||| ||||||| |||| || |||||
Sbjct: 7564 gttcctaaatataagtctttttagagattacactatggactacatacaaagcaaaat 7508



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 338  ttcctaaatacaagtctttttagagattacactacggactac 379
            |||||||||| | ||||||||||||||| ||||||| |||||
Sbjct: 7424 ttcctaaatataggtctttttagagattccactacgaactac 7465
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>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds,
           alternatively spliced
          Length = 2512

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 337 gttcctaaatacaagtctttttagagatt 365
           |||||||||||||||||||||||||||||
Sbjct: 537 gttcctaaatacaagtctttttagagatt 509
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>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene,
             complete cds
          Length = 25080

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 50/56 (89%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                     
Query: 339   tcctaaatacaagtctttttagagattacactacg-gactacgtacatagtaaaat 393
             ||||||||| ||||||||||||||||| ||||| | |||||| ||| |||||||||
Sbjct: 22008 tcctaaatataagtctttttagagatttcactaagtgactacatacgtagtaaaat 21953
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 337    gttcctaaatacaagtctttttagagattacactacggactac 379
              ||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 260168 gttcctaaatataagtctttttagagatttcaatatggactac 260210
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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 327   tactttctcggttcctaaatacaagtctttttagagatt 365
             |||| |||| ||||||||||| |||||||||||||||||
Sbjct: 83465 tactctctccgttcctaaatataagtctttttagagatt 83503



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| |||||||| |||||||| |||||
Sbjct: 89296 gttcctaaatataagtctttctagagatttcacta 89262



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| |||||||| |||||||| |||||
Sbjct: 14500 gttcctaaatataagtctttgtagagatttcacta 14534



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 327   tactttctcggttcctaaatacaagtctttttagagattacacta 371
             ||||| ||| ||||||||||| ||||||||| |||| || |||||
Sbjct: 81300 tacttcctccgttcctaaatataagtcttttaagaggtttcacta 81256



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 337   gttcctaaatacaagtctttttaga 361
             ||||||||||| |||||||||||||
Sbjct: 81146 gttcctaaatataagtctttttaga 81170
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>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 325   tatactttctcggttcctaaatacaagtctttttagagattacacta 371
             ||||||| ||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 23274 tatacttcctccgttcctaaatataagtctttgtagagatttcacta 23228



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 337   gttcctaaatacaagtctttttagagatt 365
             ||||||||||| |||||||| ||||||||
Sbjct: 51922 gttcctaaatataagtctttctagagatt 51894



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 337   gttcctaaatacaagtctttttaga 361
             ||||||||||| |||||||||||||
Sbjct: 51778 gttcctaaatataagtctttttaga 51802
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>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds
          Length = 12034

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 337  gttcctaaatacaagtctttttagagattacactacggactac 379
            |||||||||||||||||||||| || ||| ||||| |||||||
Sbjct: 3710 gttcctaaatacaagtctttttcgacattccactatggactac 3668
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>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete
            cds
          Length = 15688

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 337  gttcctaaatacaagtctttttagagattacacta 371
            ||||||||||| ||||||||||||||||| |||||
Sbjct: 8731 gttcctaaatataagtctttttagagattccacta 8765
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>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds
          Length = 13757

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 333   ctcggttcctaaatacaagtctttttagagattacactacggactacgtacatagtaaaa 392
             ||||||||||||||   ||||||||||||||||  |||||| || || |||| |||||||
Sbjct: 11558 ctcggttcctaaatgttagtctttttagagattttactacgaacaacatacaaagtaaaa 11499

               
Query: 393   ta 394
             ||
Sbjct: 11498 ta 11497
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>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway
            MITE, complete sequence
          Length = 1595

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 337  gttcctaaatacaagtctttttagagatt 365
            ||||||||||| |||||||||||||||||
Sbjct: 1367 gttcctaaatataagtctttttagagatt 1339



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 337  gttcctaaatacaagtctttttagagatt 365
            ||||||||||| |||||||||||||||||
Sbjct: 1226 gttcctaaatataagtctttttagagatt 1254
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>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and
            Stowaway MITE, complete sequence
          Length = 1602

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 337  gttcctaaatacaagtctttttagagatt 365
            ||||||||||| |||||||||||||||||
Sbjct: 1373 gttcctaaatataagtctttttagagatt 1345



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 337  gttcctaaatacaagtctttttagagatt 365
            ||||||||||| |||||||||||||||||
Sbjct: 1232 gttcctaaatataagtctttttagagatt 1260
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>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 337  gttcctaaatacaagtctttttagagatt 365
            ||||||||||| |||||||||||||||||
Sbjct: 4743 gttcctaaatataagtctttttagagatt 4771



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| |||||||| |||||||| |||||
Sbjct: 67938 gttcctaaatataagtctttgtagagatttcacta 67904



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 337  gttcctaaatacaagtctttttagagattacactacggactac 379
            |||| |||||| |||||||| ||||| || |||||||||||||
Sbjct: 4884 gttcttaaatataagtctttgtagaggttccactacggactac 4842



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 37/41 (90%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                      
Query: 344   aatacaagtctttttagagattacacta-cggactacgtac 383
             |||| ||||||||||||||||| |||||  |||||||||||
Sbjct: 93875 aatataagtctttttagagattgcactagaggactacgtac 93835
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 337   gttcctaaatacaagtctttttagagatt 365
             ||||||||||| |||||||||||||||||
Sbjct: 76965 gttcctaaatataagtctttttagagatt 76937



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| |||||||||||||| || |||||
Sbjct: 76822 gttcctaaatataagtctttttagaggtttcacta 76856
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 337 gttcctaaatacaagtctttttagagatt 365
           ||||||||||||||||||||| |||||||
Sbjct: 158 gttcctaaatacaagtcttttaagagatt 186



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 337 gttcctaaatacaagtctttttagagattacactacggactacgtac 383
           ||||||||||| ||||||||| ||| ||| |||||| ||||| ||||
Sbjct: 299 gttcctaaatataagtcttttaagaaatttcactacagactatgtac 253



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 327    tactttctcggttcctaaatacaagtctttttagagattacacta 371
              ||||| ||| ||||||||||| ||||||||| || |||| |||||
Sbjct: 194500 tacttcctccgttcctaaatataagtcttttaagcgatttcacta 194456



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 337    gttcctaaatacaagtctttttagagat 364
              ||||||||||| ||||||||||| ||||
Sbjct: 136694 gttcctaaatataagtctttttaaagat 136721



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 337   gttcctaaatacaagtctttttagagat 364
             ||||||||||| ||||||||||| ||||
Sbjct: 96981 gttcctaaatataagtctttttaaagat 97008
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>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds
          Length = 11475

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 337  gttcctaaatacaagtctttttagagattacactacggac 376
            ||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 8577 gttcctaaatataagtctttgtagagattccactatggac 8616



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 337  gttcctaaatacaagtctttttagagattacactacggactac 379
            ||||||||||| |||||| | |||||||| ||||| |||||||
Sbjct: 8713 gttcctaaatataagtctctgtagagatttcactatggactac 8671
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>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| |||||||| |||||||| |||||
Sbjct: 90884 gttcctaaatataagtctttgtagagatttcacta 90850



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| |||||||| |||||||| |||||
Sbjct: 71844 gttcctaaatataagtctttctagagatttcacta 71810



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 337   gttcctaaatacaagtctttttaga 361
             ||||||||||| |||||||||||||
Sbjct: 71701 gttcctaaatataagtctttttaga 71725
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>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC
           1b) pseudogene, complete sequence
          Length = 1147

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 337 gttcctaaatacaagtctttttagagattacacta 371
           ||||||||||| |||||||| |||||||| |||||
Sbjct: 430 gttcctaaatataagtctttgtagagatttcacta 396
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>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1
           gene, complete cds
          Length = 4098

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 337 gttcctaaatacaagtctttttagagattacacta 371
           ||||||||||| ||| | |||||||||||||||||
Sbjct: 713 gttcctaaatataagaccttttagagattacacta 747



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 326 atactttctcggttcctaaatacaagtctttttagagattacacta 371
           |||||| ||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 864 atacttcctccgttcctaaatataagacattttagagattccacta 819
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>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098
           cyclic nucleotide-gated ion channel 4 (Nec1) gene,
           complete cds
          Length = 9090

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 337 gttcctaaatacaagtctttttagagattacacta 371
           ||||||||||| ||| ||||||||||||| |||||
Sbjct: 336 gttcctaaatataagactttttagagattgcacta 302
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>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
             intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
             complete cds
          Length = 65979

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| ||||||||| ||||||| |||||
Sbjct: 47290 gttcctaaatataagtcttttaagagatttcacta 47324
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>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 337   gttcctaaatacaagtctttttagagattacacta 371
             ||||||||||| |||||||||||||| || |||||
Sbjct: 91691 gttcctaaatataagtctttttagaggtttcacta 91725
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>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds
          Length = 8387

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 337 gttcctaaatacaagtctttttagagattacacta 371
           ||||||||||| |||||||| |||||||| |||||
Sbjct: 406 gttcctaaatataagtctttctagagattccacta 372
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>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds
          Length = 11462

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 337  gttcctaaatacaagtctttttagagattacactacggactac 379
            ||||||||||| |||||||||| || ||| ||||| |||||||
Sbjct: 3650 gttcctaaatataagtctttttcgacattccactatggactac 3608
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>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds,
            cultivar:Igri
          Length = 11684

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 337  gttcctaaatacaagtctttttagagattacacta 371
            ||||||||||||||||| ||||| ||||| |||||
Sbjct: 7412 gttcctaaatacaagtccttttaaagatttcacta 7446



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 337  gttcctaaatacaagtc-tttttagagattacactacggactacgtaca 384
            ||||||||||| ||||| ||||| |||||| ||||| ||||||| ||||
Sbjct: 7554 gttcctaaatataagtctttttttgagattccactatggactacataca 7506
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>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 337   gttcctaaatacaagtctttttagag 362
             ||||||||||| ||||||||||||||
Sbjct: 57354 gttcctaaatataagtctttttagag 57379



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 337   gttcctaaatacaagtctttttaga 361
             ||||||||||| |||||||||||||
Sbjct: 52464 gttcctaaatataagtctttttaga 52440
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>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 340  cctaaatacaagtctttttagagatt 365
            |||||||| |||||||||||||||||
Sbjct: 8573 cctaaatataagtctttttagagatt 8598
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>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant
          Length = 4946

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 337  gttcctaaatacaagtctttttagagattacactacggacta 378
            ||||||||||| ||| | ||||| ||||||||||| ||||||
Sbjct: 1227 gttcctaaatataagaccttttaaagattacactatggacta 1268
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>gb|AF474923.1| Hordeum vulgare subsp. vulgare chalcone isomerase (CHI) gene, complete
             cds
          Length = 11475

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 338   ttcctaaatacaagtctttttagagattacacta 371
             |||||||||||||| | ||||||||||| |||||
Sbjct: 10863 ttcctaaatacaagaccttttagagatttcacta 10896
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>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 340   cctaaatacaagtctttttagagatt 365
             |||||||| |||||||||||||||||
Sbjct: 17181 cctaaatataagtctttttagagatt 17206
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>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 337   gttcctaaatacaagtctttttaga 361
             ||||||||||| |||||||||||||
Sbjct: 49922 gttcctaaatataagtctttttaga 49946
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>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene)
          Length = 2039

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 337  gttcctaaatacaagtctttttaga 361
            ||||||||||| |||||||||||||
Sbjct: 1916 gttcctaaatataagtctttttaga 1940
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>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene,
            partial cds; nuclear gene for plastid product
          Length = 1535

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 337  gttcctaaatacaagtctttttaga 361
            ||||||||||| |||||||||||||
Sbjct: 1367 gttcctaaatataagtctttttaga 1343
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>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds
          Length = 3686

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 37/41 (90%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                     
Query: 344  aatacaagtctttttagagattacacta-cggactacgtac 383
            |||| ||||||||||||||||| |||||  |||||||||||
Sbjct: 2034 aatataagtctttttagagattgcactagaggactacgtac 2074
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>emb|AL627125.8| Mouse DNA sequence from clone RP23-466N19 on chromosome 4, complete
             sequence
          Length = 179068

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 385   tagtaaaatagtaaaatgagt 405
             |||||||||||||||||||||
Sbjct: 64472 tagtaaaatagtaaaatgagt 64492
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>gb|BT023934.1| Drosophila melanogaster RE25404 full insert cDNA
          Length = 3022

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 236  ttgcattttgattttcgcctggat 259
            ||||| ||||||||||||||||||
Sbjct: 1161 ttgcactttgattttcgcctggat 1138
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>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region
          Length = 12998

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 344   aatacaagtctttttagagattacacta 371
             |||| ||||||||||||||||| |||||
Sbjct: 12815 aatataagtctttttagagatttcacta 12788
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>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1
            through 8
          Length = 4976

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 338  ttcctaaatacaagtctttttagagatt 365
            |||||||||| ||||||||||| |||||
Sbjct: 2219 ttcctaaatataagtctttttatagatt 2246
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>gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosome 10, complete sequence
          Length = 195384

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    acatagtaaaatagtaaaat 401
              ||||||||||||||||||||
Sbjct: 156718 acatagtaaaatagtaaaat 156737
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>emb|AL512522.1|SPBPB2B2 S.pombe chromosome II BAC pB2B2
          Length = 51715

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   atttatattcgtatgtaatt 432
             ||||||||||||||||||||
Sbjct: 36795 atttatattcgtatgtaatt 36814
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>emb|AL358912.2|SPBC1348 S.pombe chromosome II cosmid c1348
          Length = 39186

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   atttatattcgtatgtaatt 432
             ||||||||||||||||||||
Sbjct: 18862 atttatattcgtatgtaatt 18843
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>emb|AL137130.1|SPAC977 S.pombe chromosome I cosmid c977
          Length = 40815

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  atttatattcgtatgtaatt 432
            ||||||||||||||||||||
Sbjct: 8888 atttatattcgtatgtaatt 8869
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>emb|BX901942.6| Zebrafish DNA sequence from clone DKEY-121B10 in linkage group 1,
             complete sequence
          Length = 166521

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   tacatagtaaaatagtaaaa 400
             ||||||||||||||||||||
Sbjct: 27115 tacatagtaaaatagtaaaa 27134
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>emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in linkage group 2,
             complete sequence
          Length = 172284

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   atagtaaaatagtaaaatga 403
             ||||||||||||||||||||
Sbjct: 95924 atagtaaaatagtaaaatga 95943
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>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence
          Length = 160275

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    atgtaatttttattggaatc 444
              ||||||||||||||||||||
Sbjct: 105449 atgtaatttttattggaatc 105468
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>gb|AC110742.4| Homo sapiens chromosome 11, clone CTD-2026G22, complete sequence
          Length = 129095

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 382   acatagtaaaatagtaaaatgagt 405
             ||||||||||| ||||||||||||
Sbjct: 63188 acatagtaaaaaagtaaaatgagt 63165
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>ref|NM_206727.1| Drosophila melanogaster scalloped CG8544-RC, transcript variant C
           (sd), mRNA
          Length = 2849

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 236 ttgcattttgattttcgcctggat 259
           ||||| ||||||||||||||||||
Sbjct: 763 ttgcactttgattttcgcctggat 740
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>ref|NM_167465.1| Drosophila melanogaster scalloped CG8544-RA, transcript variant A
           (sd), mRNA
          Length = 2689

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 236 ttgcattttgattttcgcctggat 259
           ||||| ||||||||||||||||||
Sbjct: 603 ttgcactttgattttcgcctggat 580
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>ref|NM_078614.3| Drosophila melanogaster scalloped CG8544-RB, transcript variant B
            (sd), mRNA
          Length = 3207

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 236  ttgcattttgattttcgcctggat 259
            ||||| ||||||||||||||||||
Sbjct: 1106 ttgcactttgattttcgcctggat 1083
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>gb|AC044893.5| Homo sapiens chromosome 8, clone RP11-696E24, complete sequence
          Length = 190121

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 425  atgtaatttttattggaatc 444
            ||||||||||||||||||||
Sbjct: 2810 atgtaatttttattggaatc 2829
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>gb|AC008501.5| Homo sapiens chromosome 5 clone CTC-439N6, complete sequence
          Length = 176903

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   cattttgattttcgcctgga 258
             ||||||||||||||||||||
Sbjct: 73284 cattttgattttcgcctgga 73265
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>emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in linkage group 5,
             complete sequence
          Length = 191453

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   tacatagtaaaatagtaaaa 400
             ||||||||||||||||||||
Sbjct: 41954 tacatagtaaaatagtaaaa 41973
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>gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, complete sequence
          Length = 165604

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    cattttgattttcgcctgga 258
              ||||||||||||||||||||
Sbjct: 141327 cattttgattttcgcctgga 141346
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>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone
             BACR13P06, complete sequence
          Length = 180699

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   atagtaaaatagtaaaatga 403
             ||||||||||||||||||||
Sbjct: 70499 atagtaaaatagtaaaatga 70518
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>gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone
              BACR39E09, complete sequence
          Length = 163990

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    atagtaaaatagtaaaatga 403
              ||||||||||||||||||||
Sbjct: 114324 atagtaaaatagtaaaatga 114343
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 384      atagtaaaatagtaaaatga 403
                ||||||||||||||||||||
Sbjct: 26157635 atagtaaaatagtaaaatga 26157616



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 384      atagtaaaatagtaaaatga 403
                ||||||||||||||||||||
Sbjct: 26157481 atagtaaaatagtaaaatga 26157462



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 230      ctgtatttgcattttgattttcgc 253
                |||||||||||||||||| |||||
Sbjct: 22741633 ctgtatttgcattttgatgttcgc 22741656
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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 344  aatacaagtctttttagagattacactacggactac 379
            |||| ||||| ||||||||||| ||||| |||||||
Sbjct: 6216 aatataagtcattttagagatttcactaaggactac 6251
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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1092_A07
          Length = 137081

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   ctgtatttgcattttgattttcgc 253
             |||||||||||||||||| |||||
Sbjct: 60975 ctgtatttgcattttgatgttcgc 60998
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>gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 177129

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  acatagtaaaatagtaaaat 401
            ||||||||||||||||||||
Sbjct: 4121 acatagtaaaatagtaaaat 4140
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>emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-818K5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175210

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    taaaatatgattctgtattt 237
              ||||||||||||||||||||
Sbjct: 171244 taaaatatgattctgtattt 171225
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   atagtaaaatagtaaaatga 403
             ||||||||||||||||||||
Sbjct: 49493 atagtaaaatagtaaaatga 49474



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   atagtaaaatagtaaaatga 403
             ||||||||||||||||||||
Sbjct: 49339 atagtaaaatagtaaaatga 49320
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>gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, region 42A8-42A16, P1 clones
             DS06954 and DS05325, complete sequence
          Length = 135182

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   atagtaaaatagtaaaatga 403
             ||||||||||||||||||||
Sbjct: 74443 atagtaaaatagtaaaatga 74424
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>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete
              sequence
          Length = 305162

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    atagtaaaatagtaaaatga 403
              ||||||||||||||||||||
Sbjct: 132986 atagtaaaatagtaaaatga 133005
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>emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-747H7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200853

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   taaaatatgattctgtattt 237
             ||||||||||||||||||||
Sbjct: 67226 taaaatatgattctgtattt 67207
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>emb|AL954322.4| Zebrafish DNA sequence from clone CH211-229G11, complete sequence
          Length = 149122

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   atagtaaaatagtaaaatga 403
             ||||||||||||||||||||
Sbjct: 33564 atagtaaaatagtaaaatga 33545
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>emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, complete sequence
          Length = 110834

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   atagtaaaatagtaaaatga 403
             ||||||||||||||||||||
Sbjct: 57969 atagtaaaatagtaaaatga 57988
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>gb|M83787.1|DROSCLLPD Drosophila melanogaster scalloped protein mRNA, complete cds
          Length = 2936

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 236  ttgcattttgattttcgcctggat 259
            ||||| ||||||||||||||||||
Sbjct: 1105 ttgcactttgattttcgcctggat 1082


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,341,136
Number of Sequences: 3902068
Number of extensions: 4341136
Number of successful extensions: 79347
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79153
Number of HSP's gapped (non-prelim): 194
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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