>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      tgcatgggggcgatttcctggggc 32
              |||||| |||||||||||||||||
Sbjct: 557064 tgcatgagggcgatttcctggggc 557041

>emb|AL157695.14| Human DNA sequence from clone RP11-42I11 on chromosome 13, complete
             sequence
          Length = 65252

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tgaataatactaatatgtgt 200
             ||||||||||||||||||||
Sbjct: 41178 tgaataatactaatatgtgt 41159

>gb|AC010186.6| Homo sapiens 12p12-21.3-21.8 BAC RP11-705C15 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 74801

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tgaataatactaatatgtgt 200
             ||||||||||||||||||||
Sbjct: 29582 tgaataatactaatatgtgt 29563

>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome
          Length = 280334

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     cttgatttctgccatttatg 87
              ||||||||||||||||||||
Sbjct: 121009 cttgatttctgccatttatg 120990

>gb|AF269475.1|AF269475 Staphylococcus epidermidis strain SR1 clone step.1005c05 genomic
            sequence
          Length = 2986

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 177  ttgctgaataatactaatatgtgt 200
            |||||| |||||||||||||||||
Sbjct: 1530 ttgctgcataatactaatatgtgt 1507

>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   ttgctgaataatactaatatgtgt 200
             |||||| |||||||||||||||||
Sbjct: 84299 ttgctgcataatactaatatgtgt 84276

>gb|AC098586.3| Homo sapiens BAC clone RP11-109F18 from 4, complete sequence
          Length = 150172

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tgaataatactaatatgtgt 200
             ||||||||||||||||||||
Sbjct: 82928 tgaataatactaatatgtgt 82909

>gb|AC069275.3|AC069275 Homo sapiens chromosome 3 clone RP11-194C9 map 3p, complete sequence
          Length = 151142

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tgaataatactaatatgtgt 200
              ||||||||||||||||||||
Sbjct: 112535 tgaataatactaatatgtgt 112516

>gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B21 map 3p, complete sequence
          Length = 167220

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tgaataatactaatatgtgt 200
             ||||||||||||||||||||
Sbjct: 75820 tgaataatactaatatgtgt 75801

>gb|AC083810.16| Homo sapiens 12 BAC RP11-809N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 95838

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tgaataatactaatatgtgt 200
             ||||||||||||||||||||
Sbjct: 25803 tgaataatactaatatgtgt 25822

>gb|AF270186.1|AF270186 Staphylococcus epidermidis strain SR1 clone step.1052f10 genomic
            sequence
          Length = 2920

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 177  ttgctgaataatactaatatgtgt 200
            |||||| |||||||||||||||||
Sbjct: 2857 ttgctgcataatactaatatgtgt 2834

>gb|AF270089.1|AF270089 Staphylococcus epidermidis strain SR1 clone step.1048c06 genomic
           sequence
          Length = 2965

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 177 ttgctgaataatactaatatgtgt 200
           |||||| |||||||||||||||||
Sbjct: 575 ttgctgcataatactaatatgtgt 598

>gb|AF269995.1|AF269995 Staphylococcus epidermidis strain SR1 clone step.1039c09 genomic
            sequence
          Length = 3633

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 177  ttgctgaataatactaatatgtgt 200
            |||||| |||||||||||||||||
Sbjct: 3621 ttgctgcataatactaatatgtgt 3598

>gb|DQ163920.1| Bacteriophage SD1-M, complete genome
          Length = 281083

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     cttgatttctgccatttatg 87
              ||||||||||||||||||||
Sbjct: 122103 cttgatttctgccatttatg 122084

>emb|AL136332.5|CNS01DW4 Human chromosome 14 DNA sequence BAC R-807G16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209157

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tgaataatactaatatgtgt 200
              ||||||||||||||||||||
Sbjct: 133260 tgaataatactaatatgtgt 133279

>emb|AL159141.5|CNS01RGQ Human chromosome 14 DNA sequence BAC R-828K24 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174318

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tgaataatactaatatgtgt 200
              ||||||||||||||||||||
Sbjct: 142934 tgaataatactaatatgtgt 142915

>gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p, complete sequence
          Length = 185496

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tgaataatactaatatgtgt 200
             ||||||||||||||||||||
Sbjct: 41485 tgaataatactaatatgtgt 41466


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,977,441
Number of Sequences: 3902068
Number of extensions: 1977441
Number of successful extensions: 34787
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34749
Number of HSP's gapped (non-prelim): 38
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)