ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baalj04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT024079.1| Zea mays clone EL01N0525A10 mRNA sequence Length = 2294 Score = 331 bits (167), Expect = 2e-87 Identities = 302/347 (87%) Strand = Plus / Plus Query: 276 gctcttggaggtactcacggcgtgcccaaggtgcattataaaggccggcagggtgactac 335 ||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 402 gctcttggaggcacacacggcgtgcccaaggtgcattataaaggtcgtcagggtgactac 461 Query: 336 tatgtcatgattatggatatgctggggcctagcttgtgggattcctggaatttagcaggg 395 |||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| Sbjct: 462 tatgtcatgattatggatatgctggggcctagtttgtgggattcatggaattcattaggc 521 Query: 396 cagactatgtcatcagaaatggtagcttgtattgctgcagaggccatctctatcctggaa 455 || | ||| |||| |||||||| ||||| ||||| ||| |||| || ||| ||||| Sbjct: 522 caatccatgccatcggaaatggtggcttgcattgccatggagtccatttccatcttggaa 581 Query: 456 agcatgcattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggt 515 ||||||||||||||||||||||| |||||||| |||||||||||||| || ||||| || Sbjct: 582 agcatgcattctaaaggatatgtgcatggagacgtcaaacctgagaactttcttctgggg 641 Query: 516 cagcctggaactcctcaagaaaagaaactttttcttgtagatcttggattagcaacaaag 575 |||||| ||| ||||| ||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 642 cagccttcaacgcctcatgaaaagaaactttatcttgtggatcttggattagcaacaaag 701 Query: 576 tggaaagatcctgctactcaacagcatgttgattatgatcaacgtcc 622 |||| |||| |||||| | ||||||||| ||||||||||||||| Sbjct: 702 tggagagatactgctaatgggcagcatgttagttatgatcaacgtcc 748 Score = 111 bits (56), Expect = 3e-21 Identities = 120/140 (85%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 9 tcagcgccaacaacgccgccgccggcaacgacgacgaggnagggcaacaccgcccctttc 68 |||||||| |||||||||| |||| ||||||||||| | | |||||| || |||||| Sbjct: 127 tcagcgccgacaacgccgcggccgctaacgacgacgacg-acaccaacacggcgcctttc 185 Query: 69 cccgacacggtccagataggagggtctcccgagtacagggtcgagaggaagctcggcaaa 128 ||||||||||||||| | ||||| ||||||||||||| ||||||||||||||| |||||| Sbjct: 186 cccgacacggtccaggtcggaggatctcccgagtacaaggtcgagaggaagcttggcaaa 245 Query: 129 ggcgggtttggccacgtctt 148 || || || ||||| ||||| Sbjct: 246 ggtggcttcggccatgtctt 265
>gb|AY105752.1| Zea mays PCO066784 mRNA sequence Length = 2154 Score = 331 bits (167), Expect = 2e-87 Identities = 302/347 (87%) Strand = Plus / Plus Query: 276 gctcttggaggtactcacggcgtgcccaaggtgcattataaaggccggcagggtgactac 335 ||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 307 gctcttggaggcacacacggcgtgcccaaggtgcattataaaggtcgtcagggtgactac 366 Query: 336 tatgtcatgattatggatatgctggggcctagcttgtgggattcctggaatttagcaggg 395 |||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| Sbjct: 367 tatgtcatgattatggatatgctggggcctagtttgtgggattcatggaattcattaggc 426 Query: 396 cagactatgtcatcagaaatggtagcttgtattgctgcagaggccatctctatcctggaa 455 || | ||| |||| |||||||| ||||| ||||| ||| |||| || ||| ||||| Sbjct: 427 caatccatgccatcggaaatggtggcttgcattgccatggagtccatttccatcttggaa 486 Query: 456 agcatgcattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggt 515 ||||||||||||||||||||||| |||||||| |||||||||||||| || ||||| || Sbjct: 487 agcatgcattctaaaggatatgtgcatggagacgtcaaacctgagaactttcttctgggg 546 Query: 516 cagcctggaactcctcaagaaaagaaactttttcttgtagatcttggattagcaacaaag 575 |||||| ||| ||||| ||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 547 cagccttcaacgcctcatgaaaagaaactttatcttgtggatcttggattagcaacaaag 606 Query: 576 tggaaagatcctgctactcaacagcatgttgattatgatcaacgtcc 622 |||| |||| |||||| | ||||||||| ||||||||||||||| Sbjct: 607 tggagagatactgctaatgggcagcatgttagttatgatcaacgtcc 653 Score = 111 bits (56), Expect = 3e-21 Identities = 120/140 (85%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 9 tcagcgccaacaacgccgccgccggcaacgacgacgaggnagggcaacaccgcccctttc 68 |||||||| |||||||||| |||| ||||||||||| | | |||||| || |||||| Sbjct: 30 tcagcgccgacaacgccgcggccgctaacgacgacgacg-acaccaacacggcgcctttc 88 Query: 69 cccgacacggtccagataggagggtctcccgagtacagggtcgagaggaagctcggcaaa 128 ||||||||||||||| | ||||| ||||||||||||| ||||||||||||||| |||||| Sbjct: 89 cccgacacggtccaggtcggaggatctcccgagtacaaggtcgagaggaagcttggcaaa 148 Query: 129 ggcgggtttggccacgtctt 148 || || || ||||| ||||| Sbjct: 149 ggtggcttcggccatgtctt 168
>ref|NM_112214.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT3G13670 mRNA, complete cds Length = 2779 Score = 81.8 bits (41), Expect = 2e-12 Identities = 209/265 (78%) Strand = Plus / Plus Query: 315 aaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagcttgtgg 374 |||||| |||| || ||||| ||||||||| ||||||| ||||| ||||||||||| ||| Sbjct: 840 aaaggcaggcaaggagactattatgtcatggttatggacatgcttgggcctagcttatgg 899 Query: 375 gattcctggaatttagcagggcagactatgtcatcagaaatggtagcttgtattgctgca 434 |||| |||||| ||||||| | ||||| || |||||||||||||| ||||| | Sbjct: 900 gatttatggaatacttcagggcaagcaatgtcctcggaaatggtagcttgcattgcggtt 959 Query: 435 gaggccatctctatcctggaaagcatgcattctaaaggatatgtacatggagatgtcaaa 494 || | | || ||||| |||| |||||| | ||||| ||||| ||||| ||||| || Sbjct: 960 gaatcactttccatccttgaaaagatgcatgcaaaaggttatgtgcatggggatgttaag 1019 Query: 495 cctgagaatttccttctcggtcagcctggaactcctcaagaaaagaaactttttcttgta 554 || || |||||| | ||||| |||||| ||| ||||||| || ||||| |||||||| Sbjct: 1020 ccagaaaatttcttactcggccagccttcaacgtctcaagagaaaaaactgtttcttgtt 1079 Query: 555 gatcttggattagcaacaaagtgga 579 ||| | ||| |||| |||||||||| Sbjct: 1080 gatttgggactagctacaaagtgga 1104
>gb|AY117204.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2143 Score = 81.8 bits (41), Expect = 2e-12 Identities = 209/265 (78%) Strand = Plus / Plus Query: 315 aaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagcttgtgg 374 |||||| |||| || ||||| ||||||||| ||||||| ||||| ||||||||||| ||| Sbjct: 628 aaaggcaggcaaggagactattatgtcatggttatggacatgcttgggcctagcttatgg 687 Query: 375 gattcctggaatttagcagggcagactatgtcatcagaaatggtagcttgtattgctgca 434 |||| |||||| ||||||| | ||||| || |||||||||||||| ||||| | Sbjct: 688 gatttatggaatacttcagggcaagcaatgtcctcggaaatggtagcttgcattgcggtt 747 Query: 435 gaggccatctctatcctggaaagcatgcattctaaaggatatgtacatggagatgtcaaa 494 || | | || ||||| |||| |||||| | ||||| ||||| ||||| ||||| || Sbjct: 748 gaatcactttccatccttgaaaagatgcatgcaaaaggttatgtgcatggggatgttaag 807 Query: 495 cctgagaatttccttctcggtcagcctggaactcctcaagaaaagaaactttttcttgta 554 || || |||||| | ||||| |||||| ||| ||||||| || ||||| |||||||| Sbjct: 808 ccagaaaatttcttactcggccagccttcaacgtctcaagagaaaaaactgtttcttgtt 867 Query: 555 gatcttggattagcaacaaagtgga 579 ||| | ||| |||| |||||||||| Sbjct: 868 gatttgggactagctacaaagtgga 892
>gb|AY080703.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2653 Score = 81.8 bits (41), Expect = 2e-12 Identities = 209/265 (78%) Strand = Plus / Plus Query: 315 aaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagcttgtgg 374 |||||| |||| || ||||| ||||||||| ||||||| ||||| ||||||||||| ||| Sbjct: 840 aaaggcaggcaaggagactattatgtcatggttatggacatgcttgggcctagcttatgg 899 Query: 375 gattcctggaatttagcagggcagactatgtcatcagaaatggtagcttgtattgctgca 434 |||| |||||| ||||||| | ||||| || |||||||||||||| ||||| | Sbjct: 900 gatttatggaatacttcagggcaagcaatgtcctcggaaatggtagcttgcattgcggtt 959 Query: 435 gaggccatctctatcctggaaagcatgcattctaaaggatatgtacatggagatgtcaaa 494 || | | || ||||| |||| |||||| | ||||| ||||| ||||| ||||| || Sbjct: 960 gaatcactttccatccttgaaaagatgcatgcaaaaggttatgtgcatggggatgttaag 1019 Query: 495 cctgagaatttccttctcggtcagcctggaactcctcaagaaaagaaactttttcttgta 554 || || |||||| | ||||| |||||| ||| ||||||| || ||||| |||||||| Sbjct: 1020 ccagaaaatttcttactcggccagccttcaacgtctcaagagaaaaaactgtttcttgtt 1079 Query: 555 gatcttggattagcaacaaagtgga 579 ||| | ||| |||| |||||||||| Sbjct: 1080 gatttgggactagctacaaagtgga 1104
>ref|NM_128136.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.1 mRNA, complete cds Length = 2604 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 459 atgcattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcag 518 |||||||||| ||||||||| ||||| ||||| ||||| |||||||| || || || | Sbjct: 957 atgcattctagaggatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcct 1016 Query: 519 cctggaactcctcaagaaaagaaactttttcttgtagatcttggattagca 569 |||||||||||| |||| || |||||||| |||||||| || || |||||| Sbjct: 1017 cctggaactcctgaagagaaaaaacttttccttgtagacctcggcttagca 1067 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 346 ttatggatatgctggggcctagcttgtgggat 377 |||||||||| || ||||||||||| |||||| Sbjct: 844 ttatggatatccttgggcctagcttatgggat 875
>ref|NM_201803.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.2 mRNA, complete cds Length = 2613 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 459 atgcattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcag 518 |||||||||| ||||||||| ||||| ||||| ||||| |||||||| || || || | Sbjct: 957 atgcattctagaggatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcct 1016 Query: 519 cctggaactcctcaagaaaagaaactttttcttgtagatcttggattagca 569 |||||||||||| |||| || |||||||| |||||||| || || |||||| Sbjct: 1017 cctggaactcctgaagagaaaaaacttttccttgtagacctcggcttagca 1067 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 346 ttatggatatgctggggcctagcttgtgggat 377 |||||||||| || ||||||||||| |||||| Sbjct: 844 ttatggatatccttgggcctagcttatgggat 875
>gb|AY070056.1| Arabidopsis thaliana At2g25760 mRNA sequence Length = 2695 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 459 atgcattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcag 518 |||||||||| ||||||||| ||||| ||||| ||||| |||||||| || || || | Sbjct: 1107 atgcattctagaggatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcct 1166 Query: 519 cctggaactcctcaagaaaagaaactttttcttgtagatcttggattagca 569 |||||||||||| |||| || |||||||| |||||||| || || |||||| Sbjct: 1167 cctggaactcctgaagagaaaaaacttttccttgtagacctcggcttagca 1217 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 346 ttatggatatgctggggcctagcttgtgggat 377 |||||||||| || ||||||||||| |||||| Sbjct: 844 ttatggatatccttgggcctagcttatgggat 875
>dbj|D29694.1|RICYK6 Oryza sativa mRNA, sequence homologous to casein kinase 1-gamma gene Length = 338 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 459 atgcattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcag 518 |||||||| ||||||||||| ||||| ||||| |||||||| |||||| | || || | Sbjct: 28 atgcattcaaaaggatatgttcatggggatgtgaaacctgaaaatttcttgctagggcct 87 Query: 519 cctggaactcctcaagaaaagaaactttttcttgtagatcttggattagcaacaaagtgg 578 |||||||||| ||||||||| ||| || ||||| |||||||| ||||| || |||||| Sbjct: 88 attggaactcctgaagaaaagagactcttccttgtcgatcttggtttagctaccaagtgg 147 Query: 579 aaagat 584 | |||| Sbjct: 148 agagat 153
>dbj|AK102819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N21, full insert sequence Length = 2398 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 459 atgcattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcag 518 |||||||| ||||||||||| ||||| ||||| |||||||| |||||| | || || | Sbjct: 739 atgcattcaaaaggatatgttcatggggatgtgaaacctgaaaatttcttgctagggcct 798 Query: 519 cctggaactcctcaagaaaagaaactttttcttgtagatcttggattagcaacaaagtgg 578 |||||||||| ||||||||| ||| || ||||| |||||||| ||||| || |||||| Sbjct: 799 attggaactcctgaagaaaagagactcttccttgtcgatcttggtttagctaccaagtgg 858 Query: 579 aaagat 584 | |||| Sbjct: 859 agagat 864
>gb|AY105933.1| Zea mays PCO139662 mRNA sequence Length = 1157 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 462 cattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcagcct 521 ||||||||||| | ||| ||||| ||||| ||||| |||||||| || || ||||||||| Sbjct: 358 cattctaaagggtttgtgcatggtgatgtgaaaccagagaattttctgcttggtcagcct 417 Query: 522 ggaactcctcaagaaaagaaactttttcttgtagatcttggattagcaacaaagtggaaa 581 ||| | ||| | || |||||||||| |||| | ||||| || |||||| | ||||||||| Sbjct: 418 ggatcgcctgacgataagaaactttatcttatcgatctcggtttagcatccaagtggaaa 477 Query: 582 ga 583 || Sbjct: 478 ga 479 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 catgttgattatgatcaacg 619 |||||||||||||||||||| Sbjct: 493 catgttgattatgatcaacg 512
>gb|BT024085.1| Zea mays clone EL01N0553E07 mRNA sequence Length = 2607 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 462 cattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcagcct 521 ||||||||||| | ||| ||||| ||||| ||||| |||||||| || || ||||||||| Sbjct: 1009 cattctaaagggtttgtgcatggtgatgtgaaaccagagaattttctgcttggtcagcct 1068 Query: 522 ggaactcctcaagaaaagaaactttttcttgtagatcttggattagcaacaaagtgga 579 ||| | ||| |||| ||||| |||| | | |||||||||| |||||| | ||||||| Sbjct: 1069 ggatcgcctgaagataagaagctttaccatatagatcttggtttagcatccaagtgga 1126 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 catgttgattatgatcaacg 619 |||||||||||||||||||| Sbjct: 1144 catgttgattatgatcaacg 1163
>ref|XM_476111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1827 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 411 gaaatggtagcttgtattgctgcagaggccatctctatcctggaaagcatgcattctaaa 470 |||||||| |||||||||||| ||| || ||||| || |||| | |||||||| ||| Sbjct: 439 gaaatggttgcttgtattgctatagaagcaatctccatattggagaagatgcattcgaaa 498 Query: 471 ggatatgtacatggagatgtcaaacctgagaattt 505 || ||||| ||||| ||||| |||||||||||||| Sbjct: 499 gggtatgttcatggtgatgtaaaacctgagaattt 533 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 540 aaactttttcttgtagatcttggattagcaacaaagtggaaaga 583 |||||||||||||| || ||||||||||| || | ||||||||| Sbjct: 568 aaactttttcttgttgaccttggattagctactaggtggaaaga 611
>dbj|AK100357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K12, full insert sequence Length = 2696 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 411 gaaatggtagcttgtattgctgcagaggccatctctatcctggaaagcatgcattctaaa 470 |||||||| |||||||||||| ||| || ||||| || |||| | |||||||| ||| Sbjct: 704 gaaatggttgcttgtattgctatagaagcaatctccatattggagaagatgcattcgaaa 763 Query: 471 ggatatgtacatggagatgtcaaacctgagaattt 505 || ||||| ||||| ||||| |||||||||||||| Sbjct: 764 gggtatgttcatggtgatgtaaaacctgagaattt 798 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 309 cattataaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagc 368 ||||||||||| ||||||| || |||||| ||||||||||||| ||| |||| || ||| Sbjct: 602 cattataaagggaggcagggggattactatatcatgattatggacatgttgggtccaagc 661 Query: 369 ttgtgggat 377 |||||||| Sbjct: 662 ctgtgggat 670 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 540 aaactttttcttgtagatcttggattagcaacaaagtggaaaga 583 |||||||||||||| || ||||||||||| || | ||||||||| Sbjct: 833 aaactttttcttgttgaccttggattagctactaggtggaaaga 876
>dbj|AK072116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126I12, full insert sequence Length = 2431 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 411 gaaatggtagcttgtattgctgcagaggccatctctatcctggaaagcatgcattctaaa 470 |||||||| |||||||||||| ||| || ||||| || |||| | |||||||| ||| Sbjct: 701 gaaatggttgcttgtattgctatagaagcaatctccatattggagaagatgcattcgaaa 760 Query: 471 ggatatgtacatggagatgtcaaacctgagaattt 505 || ||||| ||||| ||||| |||||||||||||| Sbjct: 761 gggtatgttcatggtgatgtaaaacctgagaattt 795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 309 cattataaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagc 368 ||||||||||| ||||||| || |||||| ||||||||||||| ||| |||| || ||| Sbjct: 599 cattataaagggaggcagggggattactatatcatgattatggacatgttgggtccaagc 658 Query: 369 ttgtgggat 377 |||||||| Sbjct: 659 ctgtgggat 667 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 540 aaactttttcttgtagatcttggattagcaacaaagtggaaaga 583 |||||||||||||| || ||||||||||| || | ||||||||| Sbjct: 830 aaactttttcttgttgaccttggattagctactaggtggaaaga 873
>ref|NM_188260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1866 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 537 aagaaactttttcttgtagatcttggattagcaacaaagtggaaagatcctgctactcaa 596 ||||||||||||||||| ||||||||| |||| || || ||||||||| ||| ||| | Sbjct: 652 aagaaactttttcttgttgatcttggactagctactaaatggaaagatgctggtacagga 711 Query: 597 cagcatgttgattatga 613 |||||||||| ||||| Sbjct: 712 aagcatgttgaatatga 728
>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete sequence Length = 102004 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 472 gatatgtacatggagatgtcaaacctgagaatttccttctcggtcagcctggaactcctc 531 ||||||| ||||| ||||| ||||| |||||||| || || || | |||||||||||| Sbjct: 88704 gatatgtgcatggcgatgtaaaaccagagaattttctgcttgggcctcctggaactcctg 88763 Query: 532 aagaaaagaaactttttcttgtaga 556 |||| || |||||||| |||||||| Sbjct: 88764 aagagaaaaaacttttccttgtaga 88788 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 346 ttatggatatgctggggcctagcttgtgggat 377 |||||||||| || ||||||||||| |||||| Sbjct: 88343 ttatggatatccttgggcctagcttatgggat 88374
>dbj|AK103403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128C13, full insert sequence Length = 2211 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 537 aagaaactttttcttgtagatcttggattagcaacaaagtggaaagatcctgctactcaa 596 ||||||||||||||||| ||||||||| |||| || || ||||||||| ||| ||| | Sbjct: 858 aagaaactttttcttgttgatcttggactagctactaaatggaaagatgctggtacagga 917 Query: 597 cagcatgttgattatga 613 |||||||||| ||||| Sbjct: 918 aagcatgttgaatatga 934
>dbj|AK060271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-E10, full insert sequence Length = 1581 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 537 aagaaactttttcttgtagatcttggattagcaacaaagtggaaagatcctgctactcaa 596 ||||||||||||||||| ||||||||| |||| || || ||||||||| ||| ||| | Sbjct: 249 aagaaactttttcttgttgatcttggactagctactaaatggaaagatgctggtacagga 308 Query: 597 cagcatgttgattatga 613 |||||||||| ||||| Sbjct: 309 aagcatgttgaatatga 325
>ref|XM_469960.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2723 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 465 tctaaaggatatgtacatggagatgtcaaacctgagaattt 505 |||||||| | ||||||||| ||||||||||| |||||||| Sbjct: 1045 tctaaagggtttgtacatggtgatgtcaaaccagagaattt 1085
>gb|AF443205.1|AF443205 Chlamydomonas reinhardtii serine/threonine protein kinase (Mut9) mRNA, complete cds Length = 2100 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 300 cccaaggtgcattataaaggccggcagggtgactactatgtcatgattatggatatgctg 359 ||||||||||| || || |||| ||||| ||||| ||| ||||| | ||||| ||||| Sbjct: 610 cccaaggtgcactacaagggccagcaggatgacttctacatcatggtcatggacctgctg 669 Query: 360 gggcctagcttgtggga 376 || |||||||||||||| Sbjct: 670 ggccctagcttgtggga 686
>dbj|AK121620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044P16, full insert sequence Length = 2724 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 465 tctaaaggatatgtacatggagatgtcaaacctgagaattt 505 |||||||| | ||||||||| ||||||||||| |||||||| Sbjct: 1046 tctaaagggtttgtacatggtgatgtcaaaccagagaattt 1086
>dbj|AK103407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128D14, full insert sequence Length = 2424 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 465 tctaaaggatatgtacatggagatgtcaaacctgagaattt 505 |||||||| | ||||||||| ||||||||||| |||||||| Sbjct: 993 tctaaagggtttgtacatggtgatgtcaaaccagagaattt 1033
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 cagcaaggggtgcaactacggccctccgtacgagtggcatgtgta 271 |||||||||||||||||| | ||||| ||||||||||| ||||| Sbjct: 32786 cagcaaggggtgcaactatgcacctccttacgagtggcaagtgta 32830 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 600 catgttgattatgatcaacgtccg 623 |||||||| ||||||||||||||| Sbjct: 35505 catgttgactatgatcaacgtccg 35528
>ref|XM_476765.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2368 Score = 48.1 bits (24), Expect = 0.035 Identities = 87/108 (80%) Strand = Plus / Plus Query: 462 cattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcagcct 521 ||||||||||| | ||| ||||| ||||| ||||| ||||| || || || || |||||| Sbjct: 820 cattctaaagggtttgtgcatggtgatgtgaaaccagagaactttctgcttggccagcct 879 Query: 522 ggaactcctcaagaaaagaaactttttcttgtagatcttggattagca 569 ||| | ||| | || ||||| |||| |||| | |||||||| |||||| Sbjct: 880 ggatcacctgacgagaagaagctttatcttattgatcttggtttagca 927
>ref|XM_506188.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.2 patrial mRNA Length = 2394 Score = 48.1 bits (24), Expect = 0.035 Identities = 87/108 (80%) Strand = Plus / Plus Query: 462 cattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcagcct 521 ||||||||||| | ||| ||||| ||||| ||||| ||||| || || || || |||||| Sbjct: 820 cattctaaagggtttgtgcatggtgatgtgaaaccagagaactttctgcttggccagcct 879 Query: 522 ggaactcctcaagaaaagaaactttttcttgtagatcttggattagca 569 ||| | ||| | || ||||| |||| |||| | |||||||| |||||| Sbjct: 880 ggatcacctgacgagaagaagctttatcttattgatcttggtttagca 927
>dbj|AK066357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062K19, full insert sequence Length = 2647 Score = 48.1 bits (24), Expect = 0.035 Identities = 87/108 (80%) Strand = Plus / Plus Query: 462 cattctaaaggatatgtacatggagatgtcaaacctgagaatttccttctcggtcagcct 521 ||||||||||| | ||| ||||| ||||| ||||| ||||| || || || || |||||| Sbjct: 1099 cattctaaagggtttgtgcatggtgatgtgaaaccagagaactttctgcttggccagcct 1158 Query: 522 ggaactcctcaagaaaagaaactttttcttgtagatcttggattagca 569 ||| | ||| | || ||||| |||| |||| | |||||||| |||||| Sbjct: 1159 ggatcacctgacgagaagaagctttatcttattgatcttggtttagca 1206
>ref|XM_472735.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 342 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 caacgccgccgccggcaacgacgacga 45 |||||||||||||||| |||||||||| Sbjct: 57 caacgccgccgccggcgacgacgacga 31
>gb|AF082809.1| Baboon herpesvirus 2 strain OU1-76 glycoprotein G (US4) gene, partial cds; glycoprotein gJ (US5) gene, complete cds; and glycoprotein gD (US6) gene, partial cds Length = 1134 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagcgccaacaacgccgccgccg 32 ||||||||||||||||||||||| Sbjct: 1037 cagcgccaacaacgccgccgccg 1015
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence Length = 105353 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 237 tgcaactacggccctccgtacgagtggcatgtgta 271 |||||||| |||||||| ||||||||||| ||||| Sbjct: 12720 tgcaactatggccctccttacgagtggcaagtgta 12686
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 19 caacgccgccgccggcaacgacgacga 45 |||||||||||||||| |||||||||| Sbjct: 64755 caacgccgccgccggcgacgacgacga 64781
>dbj|AB232134.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU1-76 Length = 5238 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagcgccaacaacgccgccgccg 32 ||||||||||||||||||||||| Sbjct: 36 cagcgccaacaacgccgccgccg 14
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 19 caacgccgccgccggcaacgacgacga 45 |||||||||||||||| |||||||||| Sbjct: 22855980 caacgccgccgccggcgacgacgacga 22856006 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacgagg 47 ||||||||||||| |||||||||||| Sbjct: 33960040 cgccgccgccggcgacgacgacgagg 33960065 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 24541923 cgccgccgccggcgacgacgacga 24541946
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 537 aagaaactttttcttgtagatcttgga 563 ||||||||||||||||| ||||||||| Sbjct: 5331998 aagaaactttttcttgttgatcttgga 5331972 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 596 acagcatgttgattatgatcaa 617 |||||||||||||||||||||| Sbjct: 32612688 acagcatgttgattatgatcaa 32612709 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 40899665 cgccgccgccggcaacgacg 40899646 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 36052390 cgccgccgccggcgacgacgacga 36052367 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 33210552 cgccgccgccgccaacgacgacga 33210529 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 210 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 265 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 32611486 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 32611541 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 7181056 cgccgccgccggcgacgacgacga 7181033 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 7008764 cgccgccgccggcaacgacg 7008745
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 537 aagaaactttttcttgtagatcttgga 563 ||||||||||||||||| ||||||||| Sbjct: 83342 aagaaactttttcttgttgatcttgga 83316
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 537 aagaaactttttcttgtagatcttgga 563 ||||||||||||||||| ||||||||| Sbjct: 127249 aagaaactttttcttgttgatcttgga 127223
>ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacgagg 47 ||||||||||||| |||||||||||| Sbjct: 597 cgccgccgccggcgacgacgacgagg 622
>ref|NM_191434.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2097 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 596 acagcatgttgattatgatcaa 617 |||||||||||||||||||||| Sbjct: 909 acagcatgttgattatgatcaa 930 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 210 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 265 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 523 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 578
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 cgccaacaacgccgccgccggcaacg 38 |||||||||||| ||||||||||||| Sbjct: 87038 cgccaacaacgcggccgccggcaacg 87063
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 476 tgtacatggagatgtcaaacctgagaattt 505 ||||||||| ||||||||||| |||||||| Sbjct: 45469 tgtacatggtgatgtcaaaccagagaattt 45440
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 476 tgtacatggagatgtcaaacctgagaattt 505 ||||||||| ||||||||||| |||||||| Sbjct: 32698438 tgtacatggtgatgtcaaaccagagaattt 32698467 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 caacgccgccgccggcaacgacgacgag 46 |||||||||||||| | ||||||||||| Sbjct: 24100266 caacgccgccgccgccgacgacgacgag 24100293
>ref|XM_570735.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE00360) partial mRNA Length = 2223 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 cgccaacaacgccgccgccggcaacg 38 |||||||||||| ||||||||||||| Sbjct: 1305 cgccaacaacgcggccgccggcaacg 1330
>gb|BT009329.1| Triticum aestivum clone wlm24.pk0021.h1:fis, full insert mRNA sequence Length = 2668 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacgacg 44 |||||||||||||||||||||| Sbjct: 480 gccgccgccggcaacgacgacg 501
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 gtgactactatgtcatgattat 349 |||||||||||||||||||||| Sbjct: 1199988 gtgactactatgtcatgattat 1200009
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacgagg 47 ||||||||||||| |||||||||||| Sbjct: 10937 cgccgccgccggcgacgacgacgagg 10962
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 12 gcgccaacaacgccgccgccggcaacgacgacga 45 ||||| ||||||||||||||| | |||||||||| Sbjct: 26090250 gcgccgacaacgccgccgccgccgacgacgacga 26090283 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 23566386 cgccgccgccggcgacgacgacga 23566363
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 476 tgtacatggagatgtcaaacctgagaattt 505 ||||||||| ||||||||||| |||||||| Sbjct: 32788948 tgtacatggtgatgtcaaaccagagaattt 32788977 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 caacgccgccgccggcaacgacgacgag 46 |||||||||||||| | ||||||||||| Sbjct: 24016553 caacgccgccgccgccgacgacgacgag 24016580
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 596 acagcatgttgattatgatcaa 617 |||||||||||||||||||||| Sbjct: 75483 acagcatgttgattatgatcaa 75504 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 210 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 265 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 74281 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 74336
>dbj|AK120893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029O03, full insert sequence Length = 2788 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 596 acagcatgttgattatgatcaa 617 |||||||||||||||||||||| Sbjct: 1078 acagcatgttgattatgatcaa 1099 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 210 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 265 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 692 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 747
>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full insert sequence Length = 1760 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 12 gcgccaacaacgccgccgccggcaacgacgacga 45 ||||| ||||||||||||||| | |||||||||| Sbjct: 1474 gcgccgacaacgccgccgccgccgacgacgacga 1507
>dbj|AK069612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A22, full insert sequence Length = 2851 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 596 acagcatgttgattatgatcaa 617 |||||||||||||||||||||| Sbjct: 1152 acagcatgttgattatgatcaa 1173 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 210 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 265 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 766 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 821
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 12 gcgccaacaacgccgccgccggcaacgacgacga 45 ||||| ||||||||||||||| | |||||||||| Sbjct: 26018426 gcgccgacaacgccgccgccgccgacgacgacga 26018459 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 23494577 cgccgccgccggcgacgacgacga 23494554
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 12 gcgccaacaacgccgccgccggcaacgacgacga 45 ||||| ||||||||||||||| | |||||||||| Sbjct: 21421 gcgccgacaacgccgccgccgccgacgacgacga 21388
>gb|M77475.1|BLYSIP1A Hordeum vulgare seed imbitition protein (Sip1) gene, complete cds Length = 4788 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacgacg 44 |||||||||||||||||||||| Sbjct: 1711 gccgccgccggcaacgacgacg 1732
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 519 cctggaactcctcaagaaaagaaactttttcttgtagatcttggattag 567 ||||| || ||| ||||||||||||| || ||||| |||||||| |||| Sbjct: 103224 cctgggacacctgaagaaaagaaactcttccttgttgatcttggcttag 103176
>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence Length = 124254 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 aaacctgagaatttccttctc 512 ||||||||||||||||||||| Sbjct: 66699 aaacctgagaatttccttctc 66719
>emb|AL160035.19| Human DNA sequence from clone RP11-545M8 on chromosome 13 Contains a novel pseudogene similar to HSPC123, a ribosomal protein S21 (RPS21) pseudogene and a ribosomal protein S20 (RPS20) pseudogene, complete sequence Length = 146168 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 ttccttctcggtcagcctgga 524 ||||||||||||||||||||| Sbjct: 1189 ttccttctcggtcagcctgga 1209
>emb|AL159978.14| Human DNA sequence from clone RP11-496O3 on chromosome 13 Contains the 3' end of the WASF3 gene for WAS protein family, member 3 (WASP family Verprolin-homologous protein 3 (SCAR3, Scar3, WAVE3, KIAA0900)), the GPR12 gene for G protein-coupled receptor 12 (GPCR21) and two CpG islands, complete sequence Length = 206442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 ttccttctcggtcagcctgga 524 ||||||||||||||||||||| Sbjct: 205629 ttccttctcggtcagcctgga 205649
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacgac 43 ||||||||||||||||||||| Sbjct: 3069822 gccgccgccggcaacgacgac 3069842
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 346 ttatggatatgctggggcctagcttgtgggatt 378 ||||||| ||||| ||||||||||| ||||||| Sbjct: 15365 ttatggacatgcttgggcctagcttatgggatt 15397
>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete sequence Length = 223142 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aacctgagaatttccttctc 512 |||||||||||||||||||| Sbjct: 80992 aacctgagaatttccttctc 80973 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aacctgagaatttccttctc 512 |||||||||||||||||||| Sbjct: 66229 aacctgagaatttccttctc 66210
>ref|NM_188604.1| Oryza sativa (japonica cultivar-group), Ozsa8207 predicted mRNA Length = 2448 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 1514 cgccgccgccggcgacgacgacga 1537
>ref|NM_188568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 613 cgccgccgccggcaacgacg 594
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 474 tatgtacatggagatgtcaaacctgagaattt 505 ||||| ||||| ||||| |||||||||||||| Sbjct: 142925 tatgttcatggtgatgtaaaacctgagaattt 142894 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 540 aaactttttcttgtagatcttggattag 567 |||||||||||||| || |||||||||| Sbjct: 142859 aaactttttcttgttgaccttggattag 142832
>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence Length = 186860 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aacctgagaatttccttctc 512 |||||||||||||||||||| Sbjct: 173694 aacctgagaatttccttctc 173675 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aacctgagaatttccttctc 512 |||||||||||||||||||| Sbjct: 158931 aacctgagaatttccttctc 158912
>ref|XM_468321.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||| |||||||||||||| Sbjct: 598 cgccgccgctggcaacgacgacga 575
>ref|XM_468403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 519 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 |||||||||||||||| ||||||| Sbjct: 332 cgccgccgccggcaacaacgacga 309
>ref|XM_467830.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgtcttcgtcggccgccgcc 162 |||||||||||||||||||| Sbjct: 895 cgtcttcgtcggccgccgcc 876
>ref|XM_464379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 810 cgccgccgccgccaacgacgacga 833
>ref|NM_190532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 942 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 437 cgccgccgccggcgacgacgacga 460
>ref|NM_190030.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1953 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 33 cgccgccgccggcaacgacg 52
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 caacgccgccgccggcaacgacgacgag 46 |||||||||||||| | ||||||||||| Sbjct: 270 caacgccgccgccgccgacgacgacgag 297
>ref|XM_479397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacga 42 |||||||||||||||||||| Sbjct: 628 gccgccgccggcaacgacga 647
>ref|XM_478966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 40.1 bits (20), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 25 cgccgccggcaacgacgacgaggnagg 51 |||||||||| |||||||||||| ||| Sbjct: 209 cgccgccggcgacgacgacgagggagg 235
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 170196 cgccgccgccggcgacgacgacga 170219
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 100000 cgccgccgccgacaacgacgacga 100023
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18 map near E10005S, complete sequence Length = 140920 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacgacgag 46 |||||||||| ||||||||||||| Sbjct: 94314 gccgccgccgacaacgacgacgag 94337
>gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018K14, complete sequence Length = 152725 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ccgccgccggcaacgacgacgagg 47 ||||||||| |||||||||||||| Sbjct: 51288 ccgccgccgacaacgacgacgagg 51265 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 38669 cgccgccgccgccaacgacgacga 38646
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 39732 cgccgccgccggcgacgacgacga 39755
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ccgccgccggcaacgacgacgagg 47 ||||||||| |||||||||||||| Sbjct: 140478 ccgccgccgacaacgacgacgagg 140455 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 127859 cgccgccgccgccaacgacgacga 127836
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 194800 cgccgccgccgccaacgacgacga 194777
>ref|XM_369126.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00118.4) partial mRNA Length = 3690 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gtcagcgccaacaacgccgc 27 |||||||||||||||||||| Sbjct: 777 gtcagcgccaacaacgccgc 796
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 474 tatgtacatggagatgtcaaacctgagaattt 505 ||||| ||||| ||||| |||||||||||||| Sbjct: 25711 tatgttcatggtgatgtaaaacctgagaattt 25680 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 540 aaactttttcttgtagatcttggattag 567 |||||||||||||| || |||||||||| Sbjct: 25645 aaactttttcttgttgaccttggattag 25618
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 112773 cgccgccgccggcgacgacgacga 112796
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 34155 cgccgccgccgccaacgacgacga 34132
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 caacgccgccgccggcaacgacgacgag 46 |||||||||||||| | ||||||||||| Sbjct: 123566 caacgccgccgccgccgacgacgacgag 123539
>gb|AY225133.1| Feldmannia irregularis virus a strain FirrV-1 contig A, partial sequence Length = 55981 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 caacgccgccgccggcaacg 38 |||||||||||||||||||| Sbjct: 10608 caacgccgccgccggcaacg 10589
>gb|AF144659.1| Danio rerio homeobox six6 gene, intron 1 Length = 855 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 atgtacatggagatgtcaaa 494 |||||||||||||||||||| Sbjct: 362 atgtacatggagatgtcaaa 381
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ccgccgccggcaacgacgac 43 |||||||||||||||||||| Sbjct: 896767 ccgccgccggcaacgacgac 896748
>ref|XM_390767.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10591.1) partial mRNA Length = 3825 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 catggagatgtcaaacctga 499 |||||||||||||||||||| Sbjct: 604 catggagatgtcaaacctga 623
>emb|AL583863.16| Human DNA sequence from clone RP11-118G19 on chromosome 1, complete sequence Length = 113372 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 attctaaaggatatgtacat 482 |||||||||||||||||||| Sbjct: 5759 attctaaaggatatgtacat 5740
>emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on chromosome 9 Contains part of the MPDZ gene for multiple PDZ domain protein and GSSs, complete sequence Length = 103822 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 aagaaactttttcttgtaga 556 |||||||||||||||||||| Sbjct: 57742 aagaaactttttcttgtaga 57723
>emb|X61207.1|ABHISHAFE A.brasilense hisB, H, A, F and E genes for imidazole glycerolphosphate dehydratase, glutamine amidotransferase, phosphorybosilformimino-5-amino-phosphorybosil-4- imidazolecarboxamide isomerase, cyclase and phosphorybosil-AMP-cyclohydrolase Length = 4746 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 ccacgtcttcgtcggccgccgcct 163 ||||||||||| |||||||||||| Sbjct: 4449 ccacgtcttcgccggccgccgcct 4472
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tcagcgccaacaacgccgccgccg 32 |||||||||||| ||||||||||| Sbjct: 200332 tcagcgccaacagcgccgccgccg 200355
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 101554 cgccgccgccggcgacgacgacga 101577
>emb|BX537335.12| Zebrafish DNA sequence from clone DKEYP-84G9 in linkage group 23, complete sequence Length = 186566 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 562 gattagcaacaaagtggaaagatc 585 ||||||||||||||| |||||||| Sbjct: 142538 gattagcaacaaagttgaaagatc 142515
>gb|AC159534.11| Medicago truncatula clone mth2-81a23, complete sequence Length = 120504 Score = 40.1 bits (20), Expect = 8.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 210 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 265 ||||| ||||| || |||||||| ||||| || || || ||||| ||||||||||| Sbjct: 66850 aaatttgagcataaaaccagcaaagggtgtaattatggacctccttacgagtggca 66905
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 4582049 cgccgccgccggcaacgacg 4582068
>gb|AC078785.22| Homo sapiens 3 BAC RP11-572M11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185735 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 aactttttcttgtagatctt 560 |||||||||||||||||||| Sbjct: 179665 aactttttcttgtagatctt 179684
>gb|AC093898.3| Homo sapiens BAC clone RP11-724A24 from 4, complete sequence Length = 183273 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tggaatttagcagggcagac 400 |||||||||||||||||||| Sbjct: 55554 tggaatttagcagggcagac 55573
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcagcgccaacaacgccgcc 28 |||||||||||||||||||| Sbjct: 1616413 tcagcgccaacaacgccgcc 1616432 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcagcgccaacaacgccgcc 28 |||||||||||||||||||| Sbjct: 1532047 tcagcgccaacaacgccgcc 1532066
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 aagaaaagaaactttttctt 551 |||||||||||||||||||| Sbjct: 545561 aagaaaagaaactttttctt 545542
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ccgccgccggcaacgacgacgagg 47 ||||||||| |||||||||||||| Sbjct: 20131269 ccgccgccgacaacgacgacgagg 20131246 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 20118488 cgccgccgccgccaacgacgacga 20118465 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacgacgag 46 |||||||||| ||||||||||||| Sbjct: 13736505 gccgccgccgacaacgacgacgag 13736528 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 7897948 cgccgccgccgacaacgacgacga 7897925
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgccgccggcaacgacga 42 |||||||||||||||||||| Sbjct: 27599631 gccgccgccggcaacgacga 27599612 Score = 40.1 bits (20), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 25 cgccgccggcaacgacgacgaggnagg 51 |||||||||| |||||||||||| ||| Sbjct: 24050368 cgccgccggcgacgacgacgagggagg 24050394 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 20676721 cgccgccgccgtcaacgacgacga 20676744
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ccgccgccggcaacgacgacgagg 47 ||||||||| |||||||||||||| Sbjct: 22025507 ccgccgccgccaacgacgacgagg 22025484 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cgccaacaacgccgccgccg 32 |||||||||||||||||||| Sbjct: 17438803 cgccaacaacgccgccgccg 17438784 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 10626972 cgccgccgccggcgacgacgacga 10626949 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aacaacgccgccgccggcaa 36 |||||||||||||||||||| Sbjct: 5671183 aacaacgccgccgccggcaa 5671202 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 2900064 cgccgccgccggcgacgacgacga 2900087
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 24153494 cgccgccgccggcgacgacgacga 24153517 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 20856972 cgccgccgccggcgacgacgacga 20856995 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 474 tatgtacatggagatgtcaaacctgagaattt 505 ||||| ||||| ||||| |||||||||||||| Sbjct: 6195356 tatgttcatggtgatgtaaaacctgagaattt 6195325 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 540 aaactttttcttgtagatcttggattag 567 |||||||||||||| || |||||||||| Sbjct: 6195290 aaactttttcttgttgaccttggattag 6195263
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 |||||||||||||||| ||||||| Sbjct: 35044903 cgccgccgccggcaacaacgacga 35044880 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||| |||||||||||||| Sbjct: 34603120 cgccgccgctggcaacgacgacga 34603143 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgccggcaacgacgacga 45 |||||||||||||||||||| Sbjct: 31885455 gccgccggcaacgacgacga 31885474 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgtcttcgtcggccgccgcc 162 |||||||||||||||||||| Sbjct: 31621434 cgtcttcgtcggccgccgcc 31621415 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 4827220 cgccgccgccgccaacgacgacga 4827243
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 111771 cgccgccgccggcaacgacg 111752
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 28090 cgccgccgccggcaacgacg 28071
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 75704 cgccgccgccggcgacgacgacga 75681
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 147462 cgccgccgccgccaacgacgacga 147439
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 65115 cgccgccgccggcgacgacgacga 65092
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 130582 cgccgccgccggcaacgacg 130563
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gccgccgccggcaacgacga 42 |||||||||||||||||||| Sbjct: 56624 gccgccgccggcaacgacga 56605
>dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1174_G05 Length = 111202 Score = 40.1 bits (20), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 25 cgccgccggcaacgacgacgaggnagg 51 |||||||||| |||||||||||| ||| Sbjct: 91976 cgccgccggcgacgacgacgagggagg 92002
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 107810 cgccgccgccgccaacgacgacga 107833
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 69379 cgccgccgccgccaacgacgacga 69402
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 143545 cgccgccgccggcgacgacgacga 143568
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 60210 cgccgccgccggcgacgacgacga 60233
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ccgccgccggcaacgacgacgagg 47 ||||||||| |||||||||||||| Sbjct: 63380 ccgccgccgccaacgacgacgagg 63357
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 163679 cgccgccgccggcgacgacgacga 163656
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 3799 cgccgccgccgccaacgacgacga 3776
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cgccaacaacgccgccgccg 32 |||||||||||||||||||| Sbjct: 69844 cgccaacaacgccgccgccg 69825
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aacaacgccgccgccggcaa 36 |||||||||||||||||||| Sbjct: 63330 aacaacgccgccgccggcaa 63349
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgccggcaacgacgacga 45 |||||||||||||||||||| Sbjct: 46456 gccgccggcaacgacgacga 46475
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 29471 cgccgccgccgtcaacgacgacga 29494
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 |||||||||||||||| ||||||| Sbjct: 105244 cgccgccgccggcaacaacgacga 105221
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 |||||||||||||||| ||||||| Sbjct: 18066 cgccgccgccggcaacaacgacga 18043
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||| |||||||||||||| Sbjct: 114060 cgccgccgctggcaacgacgacga 114083
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||| |||||||||||||| Sbjct: 69735 cgccgccgctggcaacgacgacga 69758
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgtcttcgtcggccgccgcc 162 |||||||||||||||||||| Sbjct: 111994 cgtcttcgtcggccgccgcc 111975
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgtcttcgtcggccgccgcc 162 |||||||||||||||||||| Sbjct: 1221 cgtcttcgtcggccgccgcc 1202
>dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E04, full insert sequence Length = 2836 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 619 cgccgccgccggcgacgacgacga 642
>dbj|AK110332.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-E01, full insert sequence Length = 1737 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aacaacgccgccgccggcaa 36 |||||||||||||||||||| Sbjct: 840 aacaacgccgccgccggcaa 859
>dbj|AK109950.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-A05, full insert sequence Length = 3043 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cgccaacaacgccgccgccg 32 |||||||||||||||||||| Sbjct: 929 cgccaacaacgccgccgccg 948
>dbj|AK108253.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-A02, full insert sequence Length = 815 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacga 42 |||||||||||||||||||| Sbjct: 628 gccgccgccggcaacgacga 647
>dbj|AK107477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B10, full insert sequence Length = 2410 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacg 41 |||||||||||||||||||| Sbjct: 133 cgccgccgccggcaacgacg 152
>dbj|AK103377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127D10, full insert sequence Length = 988 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||| |||||||||||||| Sbjct: 598 cgccgccgctggcaacgacgacga 575
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 792 cgccgccgccgtcaacgacgacga 815
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 caacgccgccgccggcaacgacgacgag 46 |||||||||||||| | ||||||||||| Sbjct: 272 caacgccgccgccgccgacgacgacgag 299
>dbj|AK071003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076N19, full insert sequence Length = 1891 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgtcttcgtcggccgccgcc 162 |||||||||||||||||||| Sbjct: 893 cgtcttcgtcggccgccgcc 874
>dbj|AK058855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-B10, full insert sequence Length = 582 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 135 cgccgccgccggcgacgacgacga 112
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 gggtcagcgccaacaacgccgccg 29 |||||||||||||| ||||||||| Sbjct: 115204 gggtcagcgccaactacgccgccg 115227
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 aagaaaagaaactttttctt 551 |||||||||||||||||||| Sbjct: 3675819 aagaaaagaaactttttctt 3675838
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ccgccgccggcaacgacgacgagg 47 ||||||||| |||||||||||||| Sbjct: 20416368 ccgccgccgacaacgacgacgagg 20416345 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 20403602 cgccgccgccgccaacgacgacga 20403579 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 19089606 cgccgccgccgccaacgacgacga 19089583 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 gccgccgccggcaacgacgacgag 46 |||||||||| ||||||||||||| Sbjct: 13818503 gccgccgccgacaacgacgacgag 13818526 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||| |||||||||||| Sbjct: 7968035 cgccgccgccgacaacgacgacga 7968012
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 cgccgccgccggcaacgacgacga 45 ||||||||||||| |||||||||| Sbjct: 140024 cgccgccgccggcgacgacgacga 140047
>gb|AC005325.1|AC005325 Homo sapiens chromosome 17, clone hRPK.60_A_24, complete sequence Length = 165228 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 cagcctggaactcctcaaga 535 |||||||||||||||||||| Sbjct: 84617 cagcctggaactcctcaaga 84636
>emb|AL928728.9| Zebrafish DNA sequence from clone CH211-212E24, complete sequence Length = 206513 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 gattagcaacaaagtggaaagatc 585 ||||||||||||||| |||||||| Sbjct: 21968 gattagcaacaaagttgaaagatc 21991
>emb|AL772185.10| Mouse DNA sequence from clone RP23-103G12 on chromosome 2, complete sequence Length = 215155 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 aaaagaaactttttcttgta 554 |||||||||||||||||||| Sbjct: 143431 aaaagaaactttttcttgta 143450 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,952,190 Number of Sequences: 3902068 Number of extensions: 5952190 Number of successful extensions: 114972 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112058 Number of HSP's gapped (non-prelim): 2905 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
