Clone Name | baalj23 |
---|---|
Clone Library Name | barley_pub |
>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform mRNA, partial cds Length = 911 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 10 cggcacgaggcctcgtgccgaatcggcacgagggtc 45 |||||||||||||||||||||||||||||||||||| Sbjct: 1 cggcacgaggcctcgtgccgaatcggcacgagggtc 36 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 21 tcggcacgaggcctcgtgccg 1
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaatcggcacgagg 42 |||||||||||||||||||||||||||||||||| Sbjct: 463 tcggcacgaggcctcgtgccgaatcggcacgagg 496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||||| |||||||||||| Sbjct: 484 tcggcacgaggcctcgtgccgaattcggcacgaggg 449 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||| ||||||||||| Sbjct: 497 gcctcgtgccgattcggcacgagg 474
>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds Length = 568 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 10 cggcacgaggcctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||||||||||||| Sbjct: 74 cggcacgaggcctcgtgccgaatcggcacgagg 106 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 94 tcggcacgaggcctcgtgccg 74
>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence Length = 780 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaatcggcacgaggg 43 |||||||||||||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaatcggcacgaggg 32
>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP synthase gamma chain, mitochondrial precursor Length = 1225 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaatcggcacgagg 42 |||||||||||||||||||||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaatcggcacgagg 32 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence Length = 1331 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||||||||||| Sbjct: 2 gcacgaggcctcgtgccgaatcggcacgagg 32 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||| ||||||||||| Sbjct: 33 gcctcgtgccgattcggcacgagg 10
>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone oxidoreductase 10 kDa subunit precursor mRNA, complete cds; nuclear gene for mitochondrial product Length = 868 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 13 cacgaggcctcgtgccgaatcggcacgagg 42 |||||||||||||||||||||||||||||| Sbjct: 1 cacgaggcctcgtgccgaatcggcacgagg 30 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||| ||||||||||| Sbjct: 31 gcctcgtgccgattcggcacgagg 8
>dbj|AB226176.1| Aspergillus oryzae cDNA, contig sequence: AoEST3034 Length = 651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagggt 44 ||||||||||||||||||||||| ||||||||||||| Sbjct: 79 tcggcacgaggcctcgtgccgaattcggcacgagggt 115 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaat 32 |||||||||||||||||||||||| Sbjct: 100 tcggcacgaggcctcgtgccgaat 77
>dbj|AB229209.1| Aspergillus oryzae cDNA, contig sequence: AoEST6088 Length = 688 Score = 56.0 bits (28), Expect = 1e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||||| |||||||||||| Sbjct: 5 tcggcacgaggcctcgtgccgaattcggcacgaggg 40 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaat 32 |||||||||||||||||||||||| Sbjct: 26 tcggcacgaggcctcgtgccgaat 3
>dbj|AB094480.1| Mus musculus LE51 mRNA for hypothetical protein, complete cds Length = 1048 Score = 56.0 bits (28), Expect = 1e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||||| |||||||||||| Sbjct: 435 tcggcacgaggcctcgtgccgaattcggcacgaggg 470 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 456 tcggcacgaggcctcgtgccgaattcggcacgagg 422
>ref|NM_026928.1| Mus musculus RIKEN cDNA 1810014F10 gene (1810014F10Rik), mRNA Length = 1048 Score = 56.0 bits (28), Expect = 1e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||||| |||||||||||| Sbjct: 435 tcggcacgaggcctcgtgccgaattcggcacgaggg 470 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 456 tcggcacgaggcctcgtgccgaattcggcacgagg 422
>gb|BT016336.1| Zea mays clone Contig169 mRNA sequence Length = 576 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 575 tcggcacgaggcctcgtgccgaattcggcacgagg 541 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa 31 ||||||||||||||||||||||| Sbjct: 554 tcggcacgaggcctcgtgccgaa 576
>gb|AF499715.1| Thellungiella halophila lipid transfer protein 4-like protein mRNA, complete cds Length = 667 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 4 tcggcacgaggcctcgtgccgaattcggcacgagg 38 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaat 32 |||||||||||||||||||||||| Sbjct: 25 tcggcacgaggcctcgtgccgaat 2
>emb|AJ421017.1|GHI421017 Gossypium hirsutum mRNA for ADP-ribosylation factor (ARF1 gene) Length = 828 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagggt 44 ||||||||||||||||||||| ||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagggt 35 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|DQ118594.1| Karlodinium micrum chloroplast psaE mRNA, complete cds; nuclear gene for chloroplast product Length = 1328 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 695 tcggcacgaggcctcgtgccgaattcggcacgagg 729 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 716 tcggcacgaggcctcgtgccgaattcggcacgagg 682
>dbj|AB178055.1| Rana japonica GTH alpha mRNA for gonadotropin alpha-subunit, complete cds Length = 689 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 4 tcggcacgaggcctcgtgccgaattcggcacgagg 38 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaat 32 |||||||||||||||||||||||| Sbjct: 25 tcggcacgaggcctcgtgccgaat 2
>gb|AF332963.1| Polytomella sp. Pringsheim 198.80 ferrochelatase mRNA, complete cds Length = 2227 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 112 tcggcacgaggcctcgtgccgaattcggcacgagg 146 Score = 54.0 bits (27), Expect = 6e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||||| ||||||||||| Sbjct: 133 tcggcacgaggcctcgtgccgaattcggcacgagg 99
>gb|AY684302.1| Sparus aurata slow troponin T 2 (sTnT2) mRNA, complete cds Length = 1020 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>emb|AJ416378.1|PSP416378 Polytomella sp. 'Pringsheim 198.80' mRNA for mitochondrial cytochrome c (cyc gene) Length = 643 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|DQ118596.1| Karlodinium micrum isolate 3817 chloroplast glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds; nuclear gene for chloroplast product Length = 1358 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 10 cggcacgaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||||||||| ||||||||||| Sbjct: 1 cggcacgaggcctcgtgccgaattcggcacgagg 34 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 21 tcggcacgaggcctcgtgccg 1
>gb|AY093683.1| Suaeda maritima subsp. salsa mitogen-activated protein kinase kinase mRNA, complete cds Length = 1952 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|AY963297.1| Trichomonas vaginalis putative TBP-associated protein mRNA, complete cds Length = 1410 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB189027.1| Plutella xylostella mRNA for receptor for activated protein kinase C homolog, complete cds Length = 1132 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB180424.1| Plutella xylostella mRNA for Ribosomal protein L21, complete cds Length = 549 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|DQ187323.1| Capsaspora owczarzaki Shwachman-Bodian-Diamond protein-like protein mRNA, partial cds Length = 694 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|AY639596.1| Salicornia herbacea tonoplast intrinsic protein gamma mRNA, complete cds Length = 1108 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|AY157614.1| Ficus carica chitinase mRNA, complete cds Length = 1309 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>emb|AJ558193.2|PSP558193 Polytomella sp. Pringsheim 198.80 mitochondrial partial mRNA for ATP synthase associated protein MAAP67 (atpR gene) Length = 2203 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribosomal protein S20 mRNA, complete cds Length = 536 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgagggt 44 ||||||||||||||||||||||||| Sbjct: 76 cctcgtgccgaatcggcacgagggt 52
>dbj|AB230292.1| Aspergillus oryzae cDNA, contig sequence: AoEST7181 Length = 287 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB077106.1| Prunus persica mRNA, microsatellite marker M1a Length = 605 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompatibility class I receptor mRNA, complete cds Length = 1293 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 19 gcctcgtgccgaatcggcacgaggg 43 ||||||||||||||||||||||||| Sbjct: 1088 gcctcgtgccgaatcggcacgaggg 1112
>gb|AF466768.1| Mus musculus monoclonal antibody BBK-1 light chain mRNA, complete cds Length = 993 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|AY850179.1| Amborella trichopoda AGL2 mRNA, complete cds Length = 1107 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgaggg 43 |||||||||||||||||||| |||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgaggg 33
>dbj|AB180672.1| Plutella xylostella mRNA for ribosomal protein S23, complete cds Length = 615 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB180671.1| Plutella xylostella mRNA for ribosomal protein S9, complete cds Length = 709 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB180450.1| Plutella xylostella mRNA for cellular retinoic acid binding protein, complete cds Length = 806 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB180430.1| Plutella xylostella mRNA for Ribosomal protein L37A, complete cds Length = 353 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB180425.1| Plutella xylostella mRNA for Ribosomal protein S28, complete cds Length = 437 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB180417.1| Plutella xylostella mRNA for Ribosomal protein S29, complete cds Length = 472 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone IMAGE:3940750), complete cds Length = 847 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 18 ggcctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||||| Sbjct: 25 ggcctcgtgccgaatcggcacgagg 1
>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence Length = 1502 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 18 ggcctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||||| Sbjct: 1422 ggcctcgtgccgaatcggcacgagg 1398
>emb|AJ421970.1|VVU421970 Vulpes vulpes mRNA for sperm protein 8 (SP8) Length = 879 Score = 50.1 bits (25), Expect = 0.009 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgaggg 43 |||||||||||||||||||| |||||||||||| Sbjct: 6 gcacgaggcctcgtgccgaattcggcacgaggg 38
>ref|NM_001010842.1| Gallus gallus heat shock protein 25 (HSP25), mRNA Length = 918 Score = 48.1 bits (24), Expect = 0.034 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>gb|AY135220.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc2) mRNA, complete cds Length = 840 Score = 48.1 bits (24), Expect = 0.034 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA, complete cds Length = 654 Score = 48.1 bits (24), Expect = 0.034 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA Length = 1224 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||||||||||||||| Sbjct: 24 gcctcgtgccgaatcggcacgagg 1
>dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393 Length = 731 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgaggg 43 |||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggg 24
>gb|AF397911.1|AF397911 Mus musculus clone IMAGE:583715 mRNA sequence Length = 1108 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgccgaat 32 |||||||||||||||||||||||| Sbjct: 24 tcggcacgaggcctcgtgccgaat 1 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccga 30 |||||||||||||||||||||| Sbjct: 3 tcggcacgaggcctcgtgccga 24
>dbj|AB154518.1| Gallus gallus Hsp25 mRNA for heat shock protein 25, complete cds Length = 918 Score = 48.1 bits (24), Expect = 0.034 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>gb|BC030047.1| Mus musculus cDNA clone IMAGE:1179272, with apparent retained intron Length = 994 Score = 48.1 bits (24), Expect = 0.034 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||||||| ||||||||||| Sbjct: 840 gcacgaggcctcgtgccgaattcggcacgagg 809
>gb|AY850324.1| Magnaporthe grisea histone H4-like protein mRNA, complete cds Length = 863 Score = 48.1 bits (24), Expect = 0.034 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||||||| ||||||||||| Sbjct: 23 gcacgaggcctcgtgccgaattcggcacgagg 54
>gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds Length = 778 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgaatcggcacgagg 1
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence Length = 1546 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 1116 cctcgtgccgaatcggcacgagg 1138 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgaggg 43 ||||||||||| |||||||||||| Sbjct: 1138 cctcgtgccgattcggcacgaggg 1115
>gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate dehydrogenase (GPD1) mRNA, partial cds Length = 630 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA Length = 1541 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence Length = 1276 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgaatcggcacgagg 1 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgaggg 43 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgattcggcacgaggg 24
>gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence Length = 711 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA sequence Length = 1348 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaatcg 34 ||||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaatcg 23
>gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA Length = 1395 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23
>dbj|AB229215.1| Aspergillus oryzae cDNA, contig sequence: AoEST6094 Length = 124 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cggcacgaggcctcgtgccgaat 32 ||||||||||||||||||||||| Sbjct: 25 cggcacgaggcctcgtgccgaat 3 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 5 tcggcacgaggcctcgtgccg 25
>dbj|AB224727.1| Aspergillus oryzae cDNA, contig sequence: AoEST1576 Length = 1145 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cggcacgaggcctcgtgccgaat 32 ||||||||||||||||||||||| Sbjct: 97 cggcacgaggcctcgtgccgaat 75 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 77 tcggcacgaggcctcgtgccg 97
>gb|BC028650.1| Mus musculus coronin 7, mRNA (cDNA clone IMAGE:1068082), with apparent retained intron Length = 1214 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cggcacgaggcctcgtgccgaat 32 ||||||||||||||||||||||| Sbjct: 809 cggcacgaggcctcgtgccgaat 787 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 789 tcggcacgaggcctcgtgccg 809
>gb|AF134160.1|AF134160 Homo sapiens claudin-1 (CLDN1) mRNA, complete cds Length = 1237 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cggcacgaggcctcgtgccgaat 32 ||||||||||||||||||||||| Sbjct: 25 cggcacgaggcctcgtgccgaat 3 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 5 tcggcacgaggcctcgtgccg 25
>gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRNA, complete cds Length = 1337 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgaggg 43 ||||||||||||||||||||||| Sbjct: 1274 ctcgtgccgaatcggcacgaggg 1252
>gb|U80078.1|MMU80078 Mus musculus transcription factor BFCOL1 mRNA, complete cds Length = 2426 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cggcacgaggcctcgtgccgaat 32 ||||||||||||||||||||||| Sbjct: 25 cggcacgaggcctcgtgccgaat 3 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccg 29 ||||||||||||||||||||| Sbjct: 5 tcggcacgaggcctcgtgccg 25
>gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA (cDNA clone MGC:10300 IMAGE:3941377), complete cds Length = 707 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 ggcctcgtgccgaatcggcacgagg 42 ||||||||||||| ||||||||||| Sbjct: 25 ggcctcgtgccgattcggcacgagg 1
>gb|AY112040.1| Zea mays CL19964_1 mRNA sequence Length = 634 Score = 46.1 bits (23), Expect = 0.14 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 13 cacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||||| ||||||||||| Sbjct: 634 cacgaggcctcgtgccgaattcggcacgagg 604
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 46.1 bits (23), Expect = 0.14 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 14 acgaggcctcgtgccgaa-tcggcacgaggg 43 |||||||||||||||||| |||||||||||| Sbjct: 790 acgaggcctcgtgccgaattcggcacgaggg 820
>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds Length = 1770 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgagg 42 ||||||||||||||||||||||| Sbjct: 24 cctcgtgccgaatcggcacgagg 2 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 gcctcgtgccgaatcggcacgagg 42 |||||||||||| ||||||||||| Sbjct: 1 gcctcgtgccgattcggcacgagg 24
>gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA Length = 5154 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgag 41 |||||||||||||||||||||| Sbjct: 22 cctcgtgccgaatcggcacgag 1
>gb|BC006261.1| Homo sapiens cDNA clone IMAGE:3947934, **** WARNING: chimeric clone **** Length = 3182 Score = 44.1 bits (22), Expect = 0.54 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 16 gaggcctcgtgccgaa-tcggcacgagggt 44 |||||||||||||||| ||||||||||||| Sbjct: 1904 gaggcctcgtgccgaattcggcacgagggt 1875
>emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC synthase 1.1 (acs1.1 gene) Length = 941 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctcgtgccgaatcggcacgagg 42 |||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgagg 22
>emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processed transcript RNA for oestrogen receptor alpha (ERalpha gene) Length = 3812 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgagg 42 |||||||||||||||||||||| Sbjct: 31 ctcgtgccgaatcggcacgagg 10
>dbj|AB226552.1| Aspergillus oryzae cDNA, contig sequence: AoEST3414 Length = 751 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ggcacgaggcctcgtgccgaat 32 |||||||||||||||||||||| Sbjct: 23 ggcacgaggcctcgtgccgaat 2 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 4 tcggcacgaggcctcgtgcc 23
>dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, complete cds Length = 2427 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaatcggcacgag 41 |||||||||| ||||||||||||||||||||| Sbjct: 1 tcggcacgag--ctcgtgccgaatcggcacgag 31
>gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA Length = 2338 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgag 41 |||||||||||||||||||||| Sbjct: 22 cctcgtgccgaatcggcacgag 1
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 cgccgccctcgaccatctccgccgcc 172 ||||||||||||||| |||||||||| Sbjct: 26878713 cgccgccctcgaccacctccgccgcc 26878738
>gb|AF427519.1| Salmo salar CD9 protein mRNA, complete cds Length = 2229 Score = 44.1 bits (22), Expect = 0.54 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 19 gcctcgtgccgaat-cggcacgagggtcga 47 |||||||||||||| ||||||||||||||| Sbjct: 1 gcctcgtgccgaattcggcacgagggtcga 30
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 cccccgaggccccgaggccccg 125 |||||||||||||||||||||| Sbjct: 593001 cccccgaggccccgaggccccg 593022
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 cgccgccctcgaccatctccgccgcc 172 ||||||||||||||| |||||||||| Sbjct: 2474 cgccgccctcgaccacctccgccgcc 2499
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 cgccgccctcgaccatctccgccgcc 172 ||||||||||||||| |||||||||| Sbjct: 133339 cgccgccctcgaccacctccgccgcc 133364
>dbj|AK099401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E16, full insert sequence Length = 830 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 147 cgccgccctcgaccatctccgccgcc 172 ||||||||||||||| |||||||||| Sbjct: 230 cgccgccctcgaccacctccgccgcc 205
>gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protein 6511 mRNA, complete cds Length = 1907 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Plus Query: 9 tcggcacgaggcctcgtgccgaatcggcacgag 41 |||||||||| ||||||||||||||||||||| Sbjct: 5 tcggcacgag--ctcgtgccgaatcggcacgag 35
>gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda light chain (Igl@) mRNA, complete cds Length = 775 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 cctcgtgccgaatcggcacgag 41 |||||||||||||||||||||| Sbjct: 30 cctcgtgccgaatcggcacgag 9
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 cccccgaggccccgaggccccg 125 |||||||||||||||||||||| Sbjct: 246774 cccccgaggccccgaggccccg 246795
>gb|U55029.1|CFU55029 Canis familiaris MHC class I DLA-53 gene, exons 1-3 Length = 3580 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ccccgaggccccgaggccccg 125 ||||||||||||||||||||| Sbjct: 1237 ccccgaggccccgaggccccg 1217
>gb|AY533301.1| Petroselinum crispum mitogen-activated protein kinase kinase 2 (MKK2) mRNA, complete cds Length = 1460 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 35 ctcgtgccgaatcggcacgag 15
>emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein (fd-4' gene) Length = 2385 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9C11 mRNA, complete cds Length = 774 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|BT008918.1| Triticum aestivum clone wpa1c.pk011.o13:fis, full insert mRNA sequence Length = 1151 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 gcacgaggcctcgtgccgaat 32 ||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaat 21
>emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for putative transcription factor (ceh-43 gene) Length = 1039 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence Length = 115459 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cccgaggccccgaggccccga 126 ||||||||||||||||||||| Sbjct: 38265 cccgaggccccgaggccccga 38245
>dbj|AB229047.1| Aspergillus oryzae cDNA, contig sequence: AoEST5924 Length = 363 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 15 cgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||| ||||||||||| Sbjct: 29 cgaggcctcgtgccgaattcggcacgagg 1
>dbj|AB226784.1| Aspergillus oryzae cDNA, contig sequence: AoEST3646 Length = 742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 gcacgaggcctcgtgccgaat 32 ||||||||||||||||||||| Sbjct: 22 gcacgaggcctcgtgccgaat 2
>dbj|AB224198.1| Aspergillus oryzae cDNA, contig sequence: AoEST1040 Length = 925 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 gcacgaggcctcgtgccgaat 32 ||||||||||||||||||||| Sbjct: 22 gcacgaggcctcgtgccgaat 2
>dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box protein abstrakt, complete cds, clone: C1562 Length = 2301 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cctcgtgccgaatcggcacgagggt 44 ||||||||||||| ||||||||||| Sbjct: 23 cctcgtgccgaattggcacgagggt 47
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 cctccaggtgcccccgaggcc 114 ||||||||||||||||||||| Sbjct: 126630 cctccaggtgcccccgaggcc 126650
>gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA, complete cds Length = 1601 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin domain-containing protein F02G3.1 mRNA, complete cds Length = 3261 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 9 ctcgtgccgaatcggcacgag 29
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 tcgccgccctcgaccatctccgccg 170 ||||||| ||||||||||||||||| Sbjct: 13660116 tcgccgcgctcgaccatctccgccg 13660140
>gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen mRNA, partial cds Length = 826 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AY241394.1| Melopsittacus undulatus Mn superoxide dismutase (SOD2) mRNA, complete cds Length = 1101 Score = 42.1 bits (21), Expect = 2.1 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa-tcggcacgagg 42 ||||||||||||||||| ||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgcagaattcggcacgagg 33
>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence Length = 115368 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 cctccaggtgcccccgaggcc 114 ||||||||||||||||||||| Sbjct: 103205 cctccaggtgcccccgaggcc 103225
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence Length = 222930 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 cccgaggccccgaggccccga 126 ||||||||||||||||||||| Sbjct: 79762 cccgaggccccgaggccccga 79782
>gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacting protein 17 mRNA, complete cds Length = 903 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 28 ctcgtgccgaatcggcacgag 8
>gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>gb|AC108675.3| Homo sapiens 3 BAC RP11-760N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188894 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 490 ttccaagaccctgttgaatctcaac 514 |||| |||||||||||||||||||| Sbjct: 71192 ttcctagaccctgttgaatctcaac 71168
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein, complete cds Length = 946 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Rah1p (rah1) mRNA, complete cds Length = 503 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgag 21
>gb|AY109271.1| Zea mays PCO074636 mRNA sequence Length = 503 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 46 ctcgtgccgaatcggcacgag 26
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 28 ctcgtgccgaatcggcacgag 8
>gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgag 21
>gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, complete cds Length = 777 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 4 ctcgtgccgaatcggcacgag 24
>dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalectin-VIa, complete cds Length = 1427 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 10 ctcgtgccgaatcggcacgag 30
>gb|AY610374.1| Sus scrofa clone reje37b_g23.y1.abd, mRNA sequence Length = 668 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 16 gaggcctcgtgccgaa-tcggcacgaggg 43 |||||||||||||||| |||||||||||| Sbjct: 559 gaggcctcgtgccgaattcggcacgaggg 531
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 tcgccgccctcgaccatctccgccg 170 ||||||| ||||||||||||||||| Sbjct: 54724 tcgccgcgctcgaccatctccgccg 54748
>gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog (CycH) mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 27 ctcgtgccgaatcggcacgag 7
>gb|U55026.1|CFU55026 Canis familiaris MHC class I DLA-12 gene, complete cds Length = 3943 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ccccgaggccccgaggccccg 125 ||||||||||||||||||||| Sbjct: 1159 ccccgaggccccgaggccccg 1139
>emb|AJ420446.1|HSA420446 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1646617 Length = 778 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ggcacgaggcctcgtgccgaa 31 ||||||||||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaa 21 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcggcacgaggcctcgtgcc 28 |||||||||||||||||||| Sbjct: 20 tcggcacgaggcctcgtgcc 1
>dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohormone, complete cds Length = 620 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcgtgccgaatcggcacgag 41 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>gb|BT016288.1| Zea mays clone Contig121 mRNA sequence Length = 1032 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 gcctcgtgccgaatcggcacgagg 42 ||||||||||||||| |||||||| Sbjct: 179 gcctcgtgccgaatcagcacgagg 202
>ref|XM_959604.1| Neurospora crassa OR74A hypothetical protein (NCU09262.1) partial mRNA Length = 909 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcgaccatctccgccgcc 172 |||||||||||||||||||| Sbjct: 239 cctcgaccatctccgccgcc 258
>ref|XM_331653.1| Neurospora crassa OR74A hypothetical protein (NCU09262.1) partial mRNA Length = 909 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcgaccatctccgccgcc 172 |||||||||||||||||||| Sbjct: 239 cctcgaccatctccgccgcc 258
>emb|CR769785.19| Zebrafish DNA sequence from clone DKEY-1N3 in linkage group 13, complete sequence Length = 232168 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 304 agtatctttgctgttgccgtcatttcgc 331 |||||||||| ||||||||||| ||||| Sbjct: 88826 agtatctttgatgttgccgtcacttcgc 88799
>gb|BC041619.1| Homo sapiens cDNA clone IMAGE:5923662, partial cds Length = 3199 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 19 gcctcgtgccgaa-tcggcacgagggtc 45 ||||||||||||| |||||||||||||| Sbjct: 1422 gcctcgtgccgaattcggcacgagggtc 1395
>gb|AY223352.1| Schistosoma japonicum clone ZZD933 mRNA sequence Length = 1555 Score = 40.1 bits (20), Expect = 8.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 10 cggcacgaggcctcgtgccgaa-tcggcacga 40 ||||||||| |||||||||||| ||||||||| Sbjct: 1447 cggcacgagccctcgtgccgaattcggcacga 1416
>gb|AY223271.1| Schistosoma japonicum clone ZZD474 mRNA sequence Length = 1122 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 19 gcctcgtgccgaat-cggcacgagggtc 45 |||||||||||||| ||||||||||||| Sbjct: 332 gcctcgtgccgaattcggcacgagggtc 359
>gb|AY223029.1| Schistosoma japonicum clone ZZD1143 mRNA sequence Length = 1290 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 17 aggcctcgtgccgaa-tcggcacgaggg 43 ||||||||||||||| |||||||||||| Sbjct: 1113 aggcctcgtgccgaattcggcacgaggg 1086
>gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 map 14, complete sequence Length = 204267 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccccgaggccccgaggcccc 124 |||||||||||||||||||| Sbjct: 119812 ccccgaggccccgaggcccc 119831
>gb|BC005885.1| Homo sapiens cDNA clone IMAGE:3537164, **** WARNING: chimeric clone **** Length = 1972 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 19 gcctcgtgccgaat-cggcacgagggtc 45 |||||||||||||| ||||||||||||| Sbjct: 1398 gcctcgtgccgaattcggcacgagggtc 1425
>gb|BC003593.1| Homo sapiens mRNA similar to protein phosphatase 2, regulatory subunit B (B56), gamma isoform (cDNA clone IMAGE:2822439) Length = 5329 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 19 gcctcgtgccgaa-tcggcacgagggtc 45 ||||||||||||| |||||||||||||| Sbjct: 4112 gcctcgtgccgaattcggcacgagggtc 4085
>emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone B23L4 Length = 61971 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcgaccatctccgccgcc 172 |||||||||||||||||||| Sbjct: 38524 cctcgaccatctccgccgcc 38543
>emb|AJ785002.1| Echinococcus multilocularis raf gene for raf serine/threonine kinase, exons 1-9 Length = 12376 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 ccgtggttgaggtgcgtcca 584 |||||||||||||||||||| Sbjct: 499 ccgtggttgaggtgcgtcca 518
>emb|AJ785001.1| Echinococcus multilocularis mRNA for raf serine/threonine kinase (raf gene) Length = 2449 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 ccgtggttgaggtgcgtcca 584 |||||||||||||||||||| Sbjct: 422 ccgtggttgaggtgcgtcca 441
>gb|BC028844.2| Homo sapiens cDNA clone IMAGE:4795841 Length = 1068 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ttcttgctggtttccttcaa 428 |||||||||||||||||||| Sbjct: 720 ttcttgctggtttccttcaa 701
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 tcgatcccagccagattatcacca 67 |||||||||||| ||||||||||| Sbjct: 31513 tcgatcccagcccgattatcacca 31490
>gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, complete sequence Length = 176485 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 aatttcttgctggtttcctt 425 |||||||||||||||||||| Sbjct: 161292 aatttcttgctggtttcctt 161311
>gb|AF332574.1| Desulfovibrio gigas putative lytic transglycosylase gene, partial cds; putative universal stress response protein, putative RRF2 protein, and putative multidrug efflux transporter genes, complete cds; and unknown genes Length = 6940 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 cacgccatcccggttgccgt 381 |||||||||||||||||||| Sbjct: 755 cacgccatcccggttgccgt 736
>gb|AC090599.4| Homo sapiens chromosome 11, clone RP11-674E24, complete sequence Length = 165287 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 aatttcttgctggtttcctt 425 |||||||||||||||||||| Sbjct: 156118 aatttcttgctggtttcctt 156099
>gb|AF336848.1|AF336848 Pseudomonas pseudoalcaligenes HBQ06 PHA synthase 1 (phaC1) gene, complete cds; PHA depolymerase (phaZ) gene, partial cds; and unknown gene Length = 2939 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cttcgtcgccgccctcgacc 160 |||||||||||||||||||| Sbjct: 2414 cttcgtcgccgccctcgacc 2433
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tgccgtggttgaggtgcgtc 582 |||||||||||||||||||| Sbjct: 9585937 tgccgtggttgaggtgcgtc 9585956
>gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complete sequence Length = 161390 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ttcttgctggtttccttcaa 428 |||||||||||||||||||| Sbjct: 10514 ttcttgctggtttccttcaa 10533
>gb|AY142918.1| Heliobacillus mobilis Gamma-glutamyl phosphate reductase (GPR) gene, partial cds Length = 1281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 tcatcgctgcagctgccgaa 217 |||||||||||||||||||| Sbjct: 515 tcatcgctgcagctgccgaa 534
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tgccgtggttgaggtgcgtc 582 |||||||||||||||||||| Sbjct: 26034 tgccgtggttgaggtgcgtc 26053
>emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidial w-3 fatty acid desaturase (fad3 gene) Length = 2248 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcgtgccgaatcggcacgag 41 |||||||||||||||||||| Sbjct: 62 tcgtgccgaatcggcacgag 81
>gb|AY111159.1| Zea mays CL14483_-2 mRNA sequence Length = 534 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 19 gcctcgtgccgaat-cggcacgagggtc 45 |||||||||||||| ||||||||||||| Sbjct: 277 gcctcgtgccgaattcggcacgagggtc 304
>gb|AY609807.1| Sus scrofa clone Clu_32102.scr.msk.p1.Contig3, mRNA sequence Length = 1935 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 16 gaggcctcgtgccgaa-tcggcacgagg 42 |||||||||||||||| ||||||||||| Sbjct: 346 gaggcctcgtgccgaattcggcacgagg 373 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,547,318 Number of Sequences: 3902068 Number of extensions: 3547318 Number of successful extensions: 66833 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 66305 Number of HSP's gapped (non-prelim): 536 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)