>FIMF_SALTY (P37926) Fimbrial-like protein fimF precursor|
          Length = 172

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = -3

Query: 325 ARVSRSSSKAISLGTAPTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHARSVTPAPG 146
           A V+  S+K+++LGT PT++           A S +  G  CPPG   ++   S TPAPG
Sbjct: 42  AVVAGDSNKSVNLGTWPTKQLHAAGDATQPVAFSLKLEG--CPPGSASITF--SGTPAPG 97

>MAUG_METME (Q50233) Methylamine utilization protein mauG precursor|
          Length = 335

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
 Frame = -3

Query: 427 NTISGGDLQPRRRLARPEHSGGALHRPESSSHC--------DARVSRSSSKAISLGTAPT 272
           NT    +L PR +  RP+     L  P +            D R+SRS   A +   +P 
Sbjct: 17  NTAWSANLPPREKFKRPDSIPAPLSNPLTLEKATLGKTLFFDQRLSRSGGMACATCHSPD 76

Query: 271 ERPAVTRQQPLEAASSSRATGWP 203
           +R +  R  PL+A S S A   P
Sbjct: 77  QRWSDGRTLPLQAESVSNARRTP 99

>JPH2_HUMAN (Q9BR39) Junctophilin-2 (Junctophilin type 2) (JP-2)|
          Length = 696

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 29/88 (32%), Positives = 38/88 (43%)
 Frame = +3

Query: 15  ALPSPXGEASPGSAYSVVVLRRMEERLPLPPGGGRFERGFAFSTPGAGVTDRAWETRCRP 194
           ALPSP   A P   +++ +L   E     P GGG F+RG        G   RA E+R   
Sbjct: 189 ALPSP---AIPRGGFALSLLANAEAAARAPKGGGLFQRGALL-----GKLRRA-ESRTSV 239

Query: 195 GGQGHPVALDDDAASSGCCRVTAGRSVG 278
           G Q   V+      SSG     +  S+G
Sbjct: 240 GSQRSRVSFLKSDLSSGASDAASTASLG 267

>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1305

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 418 SGGDLQPRRRLARPEHSGGALH-RPESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQP 242
           SG  LQ   RL RP  S  A    P  +  C++  S SSS + S  ++ +E  A     P
Sbjct: 669 SGAGLQRLHRLRRPHSSSDAFPVGPAPAGSCESLSSSSSSSSSSSSSSSSESSA-GGLGP 727

Query: 241 LEAASSSRATGW 206
           L  + S R + W
Sbjct: 728 LSGSPSHRTSAW 739

>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 31/98 (31%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
 Frame = -3

Query: 418 SGGDLQPRRRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQPL 239
           S  DL P R  + P     A  R  SSS   +  S SSS + S  +   E   V    PL
Sbjct: 354 SDSDLSPARSPSAPRAPAAAARRSASSSSSSS--SSSSSSSSSSSSEGEEDEGVRPGAPL 411

Query: 238 EAASSSRATGWPCPPGRQRVSHARS---VTPAPGVEKA 134
             A    +   P    R   S A S    +PAP  E A
Sbjct: 412 ARAGPPPSPPAPAAAPRPSASSASSSAAASPAPAPEPA 449

>IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 subunit 9|
           (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1
           homolog) (hPrt1)
          Length = 814

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = -3

Query: 412 GDLQPRRRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQPLEA 233
           G  QP    A P  + G L RP      +A  + +SS+ + +  A  E P V  +   EA
Sbjct: 20  GQQQPA---AEPPPAEGLL-RPAGPGAPEAAGTEASSEEVGIAEAGPE-PEVRTEPAAEA 74

Query: 232 ASSSRATGWPCPPGRQRV--SHARSVTPAPG 146
            ++S  +  P PP  + +  SHA    PA G
Sbjct: 75  EAASGPSESPSPPAAEELPGSHAEPPVPAQG 105

>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1|
          Length = 2173

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = -3

Query: 349  PESSSHCD-ARVSRSSSKAIS--LGTAPTERPAVTRQQPLEAASSSRATGWPCPPGRQRV 179
            PE +S     R +RSS K+    L TAP  +P+ +  QP+ A  +S+AT       R R 
Sbjct: 1469 PEPTSQATRGRTNRSSVKSPETVLRTAPELQPSTSTHQPVTAKHTSQAT-------RGRT 1521

Query: 178  SHARSVTPAPGVEKA 134
            + +   TP P V  A
Sbjct: 1522 NRSSVKTPEPVVSTA 1536



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
 Frame = -3

Query: 379  PEHSGGALHRPESSSHCD-ARVSRSSSKAI--SLGTAPTERPAVTRQQPLEAASSSRATG 209
            P  S   L  PE +S     R +RSS K    ++ TAP   P  +  QP+    +SRAT 
Sbjct: 1664 PSTSRSQLVTPEPTSRATRGRKNRSSVKTPEPAVPTAPELHPTTSTDQPVTPKPTSRAT- 1722

Query: 208  WPCPPGRQRVSHARSVTPAP 149
                  R R + +   TP P
Sbjct: 1723 ------RGRTNRSSVKTPEP 1736

>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B|
            subunit (Voltage-gated calcium channel alpha subunit
            Cav2.2) (DOE-4)
          Length = 2326

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -3

Query: 355  HRPESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQPLEAASSSRATGWPCPPGRQRVS 176
            H  E +   DA++   SSK    G +   RP  + ++  +   S    G   PP  +   
Sbjct: 2066 HADEEAGQLDAQLRDQSSKERERGRSQERRPPSSAEK--QRYYSCDRYGSREPPQPRSTD 2123

Query: 175  HARSVTPAPGVEK 137
            H+RS +P+ G E+
Sbjct: 2124 HSRSASPSTGTEQ 2136

>ZCHC8_MOUSE (Q9CYA6) Zinc finger CCHC domain-containing protein 8|
          Length = 709

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 30/119 (25%), Positives = 44/119 (36%)
 Frame = +3

Query: 24  SPXGEASPGSAYSVVVLRRMEERLPLPPGGGRFERGFAFSTPGAGVTDRAWETRCRPGGQ 203
           SP  +   GSA +      ++  + +PPG  +  + F F  P    T         P  Q
Sbjct: 429 SPKKQRKEGSAAASPADMELDSDVEIPPGS-QSSKAFQFQPPLPPGTPP-------PLPQ 480

Query: 204 GHPVALDDDAASSGCCRVTAGRSVGAVPRLMALDDDRLTRASQCDEDSGRWRAPPECSG 380
           G P  L       G   +T   S  A P   A+D+D LT     ++    W A  +  G
Sbjct: 481 GTPPPLFTPPLPKGTPPLTPSDSPQARPAASAMDEDALTLEELEEQQRQIWAALQQAEG 539

>SAPS2_HUMAN (O75170) SAPS domain family member 2|
          Length = 927

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -3

Query: 337 SHCDARVSRSSSKAISLGTAPTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHAR-SV 161
           SH +   S+   KA S  +       VTR+ PL A+ SS + G     G Q+ + A  +V
Sbjct: 752 SHAEGSRSQGPEKAFSPASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAV 811

Query: 160 TPAPGVE 140
           +  PG E
Sbjct: 812 SRGPGRE 818

>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -3

Query: 382  RPEHSGGALHRPESSSHCD-ARVSRSSSKAIS--LGTAPTERPAVTRQQPLEAASSSRAT 212
            +P  S   L  PE +S     R +RSS K     + TAP   P  +  QP+    +SRAT
Sbjct: 1579 QPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRAT 1638

Query: 211  GWPCPPGRQRVSHARSVTPAP 149
                   R++ + +   TP P
Sbjct: 1639 -------RRKTNRSSVKTPKP 1652

>CFAH_HUMAN (P08603) Complement factor H precursor (H factor 1)|
          Length = 1231

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 348 GRWRAPPECSGRARRRLGCKSPP 416
           G+W +PP+C G     L CKSPP
Sbjct: 918 GKWSSPPQCEG-----LPCKSPP 935

>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1|
          Length = 2171

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -3

Query: 382  RPEHSGGALHRPESSSHCD-ARVSRSSSKAIS--LGTAPTERPAVTRQQPLEAASSSRAT 212
            +P  S   L  PE +S     R +RSS K     + TAP   P  +  QP+    +SRAT
Sbjct: 1661 QPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRAT 1720

Query: 211  GWPCPPGRQRVSHARSVTPAP 149
                   R++ + +   TP P
Sbjct: 1721 -------RRKTNRSSVKTPKP 1734

>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2|
           precursor (Endothelial and smooth muscle cell-derived
           neuropilin-like protein)
          Length = 769

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 192 PGGQGHPVALDDDAA-SSGCCRVTAGRSVGAVPRLMAL 302
           PGG   P A    A  S+GCC +  GR+  + PRL+ L
Sbjct: 16  PGGPAAPAATGRAALPSAGCCPLPPGRNSSSRPRLLLL 53

>GPR61_HUMAN (Q9BZJ8) Probable G-protein coupled receptor 61 (Biogenic amine|
           receptor-like G-protein coupled receptor)
          Length = 451

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 84  EERLPLPPGGGRFERGFAFSTPGAGVTDRAWETRCRPGGQGHPVALD 224
           EE L LP   G  E  F     G G    +W +R  P  +  P A+D
Sbjct: 365 EEELRLPSREGSIEENFLQFLQGTGCPSESWVSRPLPSPKQEPPAVD 411

>UVRC_DESDG (Q313T1) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 700

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
 Frame = +3

Query: 210 PVALDDDAASSGCCRVTA-------GRSVGAVPRLMALDDDRLTRASQCDEDSGRWRAPP 368
           P    +++AS    R  A       G  V  +P   A D+  +T A++   +  R    P
Sbjct: 400 PPLCAEESASGSALRAVAEMLTELRGGPVRVLPPRNATDNQLVTMATENAREDARAEKRP 459

Query: 369 ECSGRARRRLGCKSPPLMV 425
           + +G    +LG  +PP+ +
Sbjct: 460 DVAGVIAAKLGMSAPPVRI 478

>PLCB1_HUMAN (Q9NQ66) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154)
          Length = 1216

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/51 (37%), Positives = 22/51 (43%)
 Frame = -3

Query: 286 GTAPTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHARSVTPAPGVEKA 134
           G  P+E P+  R  P E   +   T  P PP     S A    PAPG  KA
Sbjct: 845 GETPSEAPSEARTTPAENGVNHTTTLTPKPP-----SQALHSQPAPGSVKA 890

>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;|
            Lipovitellin LV-1C; Lipovitellin LV-2]
          Length = 1823

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = -3

Query: 385  ARPEHSG-GALHR-PESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQPLEAASSSRAT 212
            A+ +H+G GA H  P+S S   +  S SSS + S   +  + P   + +P  ++SSS ++
Sbjct: 1201 AKRQHAGHGAPHLGPQSHSSSSSSSSSSSSSSASKSFSTVKPPMTRKPRPARSSSSSSSS 1260

>SC5A6_RABIT (Q9XT77) Sodium-dependent multivitamin transporter (Na(+)-dependent|
           multivitamin transporter)
          Length = 636

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 384 ARRRLGCKSPPLMVFISYLTPVSLFV*PSDIYRLQC*RSTEMWIAG 521
           A RR+GC    L +  ++ + V++   PS+IYR      T+ W  G
Sbjct: 62  ADRRMGCLPVALSLLATFQSAVAILGVPSEIYRF----GTQYWFLG 103

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = -3

Query: 403 QPRRRLARPEHSGGALHR-PESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQPLEAAS 227
           QP +R     HS     R P++SS    R   SSS       +P+ RP     +  E   
Sbjct: 691 QPNKR-----HSPSPRPRAPQTSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKK 745

Query: 226 SSRATGWPCPPGRQRVSHARSVTPAP 149
             +A   P P   +RVS +RSV+ +P
Sbjct: 746 IKKAAS-PSPQSVRRVSSSRSVSGSP 770


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,786,029
Number of Sequences: 219361
Number of extensions: 1943224
Number of successful extensions: 6240
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6218
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)