Clone Information

BLAST Search Result

Clone Name	baalj16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	OPDA_HAEIN (P44573) Oligopeptidase A (EC 3.4.24.70)	127	2e-29
2	OPDA_SALTY (P27237) Oligopeptidase A (EC 3.4.24.70)	117	4e-29
3	OPDA_ECOLI (P27298) Oligopeptidase A (EC 3.4.24.70)	117	4e-29
4	DCP_ECOLI (P24171) Peptidyl-dipeptidase dcp (EC 3.4.15.5) (Dipep...	54	5e-07
5	DCP_SALTY (P27236) Peptidyl-dipeptidase dcp (EC 3.4.15.5) (Dipep...	50	4e-06
6	GAS8_MOUSE (Q60779) Growth-arrest-specific protein 8 (Growth arr...	36	0.11
7	MEPD_RAT (P24155) Thimet oligopeptidase (EC 3.4.24.15) (Endo-oli...	35	0.19
8	MEPD_PIG (P47788) Thimet oligopeptidase (EC 3.4.24.15) (Endopept...	35	0.19
9	GAS8_HUMAN (O95995) Growth-arrest-specific protein 8 (Growth arr...	34	0.33
10	Y1923_AQUAE (O67752) Hypothetical protein aq_1923 precursor	33	0.56
11	MEPD_HUMAN (P52888) Thimet oligopeptidase (EC 3.4.24.15) (Endope...	33	0.56
12	MCRY_METTH (P21111) Methyl-coenzyme M reductase II beta subunit ...	33	0.73
13	RDRP_RCNMV (P22956) Putative RNA-directed RNA polymerase (EC 2.7...	33	0.96
14	RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabapt...	33	0.96
15	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	33	0.96
16	IQG1_YEAST (Q12280) Ras GTPase-activating-like protein IQG1 (IQG...	32	1.6
17	UGTAP_MOUSE (Q6P6M7) UGA suppressor tRNA-associated protein	32	2.1
18	CEA1_SHISO (P21178) Colicin-E1*	32	2.1
19	RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death ...	32	2.1
20	NIRA_EMENI (P28348) Nitrogen assimilation transcription factor nirA	32	2.1
21	UGTAP_HUMAN (Q9HD40) UGA suppressor tRNA-associated protein (tRN...	31	2.8
22	SYA_VIBVY (Q7MHR6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	31	2.8
23	SYA_VIBVU (Q8DC49) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	31	2.8
24	CING_HUMAN (Q9P2M7) Cingulin	31	2.8
25	MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II ...	31	2.8
26	RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Raba...	31	2.8
27	CWC26_YARLI (Q6CAX1) Pre-mRNA-splicing factor CWC26	31	2.8
28	MFP1_LYCES (P93203) MAR binding filament-like protein 1	31	3.6
29	RAB1_DISOM (P22125) Ras-related protein ORAB-1	30	4.8
30	GRPE_PSYS1 (Q9L516) Protein grpE (HSP-70 cofactor)	30	4.8
31	FRZCD_MYXXA (P43500) Frizzy aggregation protein frzCD	30	4.8
32	RAB1A_RAT (Q6NYB7) Ras-related protein Rab-1A	30	4.8
33	RAB1A_MOUSE (P62821) Ras-related protein Rab-1A (YPT1-related pr...	30	4.8
34	RAB1A_HUMAN (P62820) Ras-related protein Rab-1A (YPT1-related pr...	30	4.8
35	RAB1A_CANFA (P62822) Ras-related protein Rab-1A	30	4.8
36	RAB1A_LYMST (Q05974) Ras-related protein Rab-1A	30	4.8
37	RRF_IDILO (Q5QXS3) Ribosome recycling factor (Ribosome-releasing...	30	4.8
38	POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast prec...	30	6.2
39	GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macr...	30	6.2
40	MBB1A_BRARE (Q6DRL5) Myb-binding protein 1A-like protein	30	6.2
41	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	30	6.2
42	SGO2_SCHPO (O13734) Shugoshin-2	30	6.2
43	SECA_STACA (P47994) Preprotein translocase secA subunit	30	6.2
44	YPTV1_VOLCA (P31584) GTP-binding protein yptV1	30	8.1
45	UGTAP_PONPY (Q5RAK7) UGA suppressor tRNA-associated protein	30	8.1
46	RABE1_HUMAN (Q15276) Rab GTPase-binding effector protein 1 (Raba...	30	8.1

>OPDA_HAEIN (P44573) Oligopeptidase A (EC 3.4.24.70)|
          Length = 681

 Score =  127 bits (320), Expect = 2e-29
 Identities = 68/169 (40%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
 Frame = +3

Query: 159 LGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQEL 338
           +GQ K +Y A+ A++NS+++   S A+K+ +E  ++D  L G+ L +E+++ + +I   L
Sbjct: 101 VGQHKGLYNAYLALKNSAEFADYSIAQKKAIENSLRDFELSGIGLSEEKQQRYGEIVARL 160

Query: 339 EKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAENGPWMI 518
            +L+ +FS NVLDAT  +EKL+ ++ E+ GLP SAL  A Q+A SKG +        +  
Sbjct: 161 SELNSQFSNNVLDATMGWEKLIENEAELAGLPESALQAAQQSAESKGLKG-------YRF 213

Query: 519 TLDAPSFTAVMQHAKNRALREEVYRAYLTRAS-----SGDLDNTDIISQ 650
           TL+ PS+  VM + +NRALREE+YRAY TRAS     +G  DN+ ++ +
Sbjct: 214 TLEIPSYLPVMTYCENRALREEMYRAYATRASEQGPNAGKWDNSKVMEE 262

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>OPDA_SALTY (P27237) Oligopeptidase A (EC 3.4.24.70)|
          Length = 680

 Score =  117 bits (294), Expect(2) = 4e-29
 Identities = 62/169 (36%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
 Frame = +3

Query: 159 LGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQEL 338
           +GQ + +Y A+  +R+   + +L+ A+K+ V+  ++D  L G+ L  E+++ + +I   L
Sbjct: 100 VGQHEGLYNAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRL 159

Query: 339 EKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAENGPWMI 518
            +L  ++S NVLDAT  + KL+TD+ E+ G+P SAL  A   A +K  E        +++
Sbjct: 160 SELGNQYSNNVLDATMGWTKLITDEAELAGMPESALAAAKAQAEAKEQEG-------YLL 212

Query: 519 TLDAPSFTAVMQHAKNRALREEVYRAYLTRAS-----SGDLDNTDIISQ 650
           TLD PS+  VM +  N+ALREE+YRAY TRAS     +G  DN+ ++ +
Sbjct: 213 TLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSPVMEE 261



 Score = 30.0 bits (66), Expect(2) = 4e-29
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 68  VDHLKAVKDSPDLRSAVEDVQPEXSE 145
           + HL +VK+SP+LR A E   P  SE
Sbjct: 70  ISHLNSVKNSPELREAYEQTLPLLSE 95

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>OPDA_ECOLI (P27298) Oligopeptidase A (EC 3.4.24.70)|
          Length = 680

 Score =  117 bits (293), Expect(2) = 4e-29
 Identities = 63/169 (37%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
 Frame = +3

Query: 159 LGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQEL 338
           +GQ + +Y+A+  +R+   + +L+ A+K+ V+  ++D  L G+ L  E+++ + +I   L
Sbjct: 100 VGQHEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRL 159

Query: 339 EKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAENGPWMI 518
            +L  ++S NVLDAT  + KLVTD+ E+ G+P SAL  A   A +K  E        +++
Sbjct: 160 SELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEG-------YLL 212

Query: 519 TLDAPSFTAVMQHAKNRALREEVYRAYLTRAS-----SGDLDNTDIISQ 650
           TLD PS+  VM +  N+ALREE+YRAY TRAS     +G  DN+ ++ +
Sbjct: 213 TLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEE 261



 Score = 30.4 bits (67), Expect(2) = 4e-29
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 68  VDHLKAVKDSPDLRSAVEDVQPEXSE 145
           V HL +VK+SP+LR A E   P  SE
Sbjct: 70  VSHLNSVKNSPELREAYEQTLPLLSE 95

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>DCP_ECOLI (P24171) Peptidyl-dipeptidase dcp (EC 3.4.15.5) (Dipeptidyl|
           carboxypeptidase)
          Length = 680

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 38/136 (27%), Positives = 64/136 (47%)
 Frame = +3

Query: 243 RVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEI 422
           R+VE   +  VL G  L    +     +  E   L+ +F++ +L A K    +V D  ++
Sbjct: 133 RLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDIAQL 192

Query: 423 DGLPASALGLAAQTAVSKGHENASAENGPWMITLDAPSFTAVMQHAKNRALREEVYRAYL 602
            G+    + LAA+ A  KG +N       W+I L   +    +   ++RA RE+++ A  
Sbjct: 193 AGMSEQEIALAAEAAREKGLDNK------WLIPLLNTTQQPALAEMRDRATREKLFIAGW 246

Query: 603 TRASSGDLDNTDIISQ 650
           TRA   D ++T  I Q
Sbjct: 247 TRAEKNDANDTRAIIQ 262

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>DCP_SALTY (P27236) Peptidyl-dipeptidase dcp (EC 3.4.15.5) (Dipeptidyl|
           carboxypeptidase)
          Length = 680

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 40/142 (28%), Positives = 62/142 (43%)
 Frame = +3

Query: 225 LSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLV 404
           L D   R+V+   +  VL G  L +E +     +  E   L  +F++ +L A+K     V
Sbjct: 127 LDDESLRLVDVIHQRFVLAGAQLAEEDKARLKVLNTESATLMSQFNQRLLAASKAGGLAV 186

Query: 405 TDKKEIDGLPASALGLAAQTAVSKGHENASAENGPWMITLDAPSFTAVMQHAKNRALREE 584
            D   + GL    + +AA+ A  KG E        W I L   +    +   ++R  RE 
Sbjct: 187 DDAHCLAGLSPEEMTVAAEAAREKGLEER------WFIPLLNTTQQPALATLRDRQTREN 240

Query: 585 VYRAYLTRASSGDLDNTDIISQ 650
           ++ A  TRA  GD  +T  I Q
Sbjct: 241 LFAASWTRAEKGDAHDTRAIVQ 262

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>GAS8_MOUSE (Q60779) Growth-arrest-specific protein 8 (Growth arrest-specific|
           11)
          Length = 478

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
 Frame = +3

Query: 234 ARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKK--FEKLVT 407
           AR +V E ++KD       LE      F ++QQE E+L  KF++ + +  +K  F+ L+ 
Sbjct: 312 ARLKVAERELKDLKWEHEVLEQR----FIKVQQEREELYRKFADAIQEVQQKTGFKNLLL 367

Query: 408 DKKEIDGLPASALGLAAQTAVSKGHENASAEN-GPWMITLDAPSFTAVMQHAKNRALREE 584
           ++K        AL  A +    + +E  +A N  P  +TL +     V++ +KN  +++ 
Sbjct: 368 ERK------LQALNAAVEKREVQFNEVLAASNLDPTALTLVSRKLEDVLE-SKNTTIKDL 420

Query: 585 VYRAYLTRASSGDLDNT 635
            Y       +  DL  T
Sbjct: 421 QYELARVCKAHNDLLRT 437

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>MEPD_RAT (P24155) Thimet oligopeptidase (EC 3.4.24.15) (Endo-oligopeptidase|
           A) (Endopeptidase 24.15) (PZ-peptidase) (Soluble
           metallo-endopeptidase)
          Length = 686

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 3/152 (1%)
 Frame = +3

Query: 144 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 323
           +F + +   + +Y+    ++     DSL     R +E  IK     G+ L  + +E    
Sbjct: 106 EFDVEMSMRQDVYQRVVWLQEKIPKDSLKPEAARYLERLIKLGRRNGLHLPQDTQEKIKN 165

Query: 324 IQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAEN 503
           I++ L  L   F++N+ + T     L   ++E+ GLP   L    +T           E+
Sbjct: 166 IKKRLSLLCIDFNKNLNEDT---TFLPFTREELGGLPEDFLNSLEKT-----------ED 211

Query: 504 GPWMITLDAPSFTAVMQHA---KNRALREEVY 590
           G   +TL  P +  +++     + R L EE +
Sbjct: 212 GKLKVTLKYPHYFPLLKKCHVPETRRLLEEAF 243

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>MEPD_PIG (P47788) Thimet oligopeptidase (EC 3.4.24.15) (Endopeptidase 24.15)|
          Length = 686

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 34/155 (21%), Positives = 64/155 (41%)
 Frame = +3

Query: 144 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 323
           +F + +   + +Y+    ++     DSL     R +E  IK     G+ L  E +E    
Sbjct: 106 EFDVEMSMRQDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPKETQEKIKS 165

Query: 324 IQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAEN 503
           I+++L  L   F++N+ + T     L   ++E+ GLP   L    +T           E+
Sbjct: 166 IKKKLSLLCIDFNKNLNEDT---TFLPVTREELGGLPEDFLNSLEKT-----------ED 211

Query: 504 GPWMITLDAPSFTAVMQHAKNRALREEVYRAYLTR 608
               +TL  P +  +++       R +V  A+  R
Sbjct: 212 EKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNCR 246

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>GAS8_HUMAN (O95995) Growth-arrest-specific protein 8 (Growth arrest-specific|
           11)
          Length = 478

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
 Frame = +3

Query: 234 ARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKK--FEKLVT 407
           AR +V E ++KD       LE      F ++QQE ++L  KF+  + +  +K  F+ LV 
Sbjct: 312 ARLKVREKELKDLQWEHEVLEQR----FTKVQQERDELYRKFTAAIQEVQQKTGFKNLVL 367

Query: 408 DKKEIDGLPASALGLAAQTAVSKGHENASAEN-GPWMITLDAPSFTAVMQHAKNRALREE 584
           ++K        AL  A +    + +E  +A N  P  +TL +     V++ +KN  +++ 
Sbjct: 368 ERK------LQALSAAVEKKEVQFNEVLAASNLDPAALTLVSRKLEDVLE-SKNSTIKDL 420

Query: 585 VYRAYLTRASSGDLDNT 635
            Y       +  DL  T
Sbjct: 421 QYELAQVCKAHNDLLRT 437

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>Y1923_AQUAE (O67752) Hypothetical protein aq_1923 precursor|
          Length = 296

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 21/62 (33%), Positives = 36/62 (58%)
 Frame = +3

Query: 237 RKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKK 416
           ++RV++   K+A   G   E+ ++E+  +I++E  K   +F  N+LDA   FEK +   K
Sbjct: 202 KERVIK---KEAQKRGKTPEEFKKELIRKIEEEKLKARSEFERNLLDA---FEKFLEKGK 255

Query: 417 EI 422
           EI
Sbjct: 256 EI 257

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>MEPD_HUMAN (P52888) Thimet oligopeptidase (EC 3.4.24.15) (Endopeptidase 24.15)|
           (MP78)
          Length = 688

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 34/155 (21%), Positives = 64/155 (41%)
 Frame = +3

Query: 144 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 323
           +F + +   + +Y+    ++     DSL     R +E  IK     G+ L  E +E   +
Sbjct: 106 EFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKR 165

Query: 324 IQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHENASAEN 503
           I+++L  L   F++N+ + T     L    +E+ GLP   L           +     E+
Sbjct: 166 IKKKLSLLCIDFNKNLNEDT---TFLPFTLQELGGLPEDFL-----------NSLEKMED 211

Query: 504 GPWMITLDAPSFTAVMQHAKNRALREEVYRAYLTR 608
           G   +TL  P +  +++       R +V  A+  R
Sbjct: 212 GKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNCR 246

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>MCRY_METTH (P21111) Methyl-coenzyme M reductase II beta subunit (EC 2.8.4.1)|
           (Coenzyme-B sulfoethylthiotransferase beta) (MCR II
           beta)
          Length = 442

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
 Frame = +3

Query: 183 EAFNAIRNSSDWDSLSDARKRV------VEGQIKDAVLGGVALEDEQREIFNQIQQELEK 344
           EA + ++N +  + +SD ++ V      +EG +K A LGG +     RE+   I +  E 
Sbjct: 24  EAVSPLKNPTIANLVSDVKRSVAVNLAGIEGSLKKAALGGKSNFIPGREVELPIVENAEA 83

Query: 345 LSEKFSENVL---DATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 473
           ++EK    V    D       +   ++ +  +P + +G+AA   VS
Sbjct: 84  IAEKVKRLVQTSEDDDTNIRLINNGQQILVQVPTTRMGVAADYTVS 129

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>RDRP_RCNMV (P22956) Putative RNA-directed RNA polymerase (EC 2.7.7.48)|
           [Contains: 27 kDa protein; 57 kDa protein]
          Length = 767

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +3

Query: 171 KPIYEAFNAIRN-SSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKL 347
           KPI  AF++I     +W      + ++++  + D V        E+R+++ +    LEK 
Sbjct: 319 KPIQNAFDSISYFREEWLRKLSHKGQILKSSLADVV---ACYSSEKRKLYQKAADSLEKK 375

Query: 348 SEKFSENVLDATKKFEKLVTDKKE 419
             ++ ++ + A  K EKL  D K+
Sbjct: 376 PVQWRDSKVQAFIKVEKLECDTKD 399

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>RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha)
          Length = 862

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +3

Query: 144 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 323
           +F+LRL Q +  +  +   R S+D + ++D R+R+ EGQ ++ +   +    E  E    
Sbjct: 131 QFHLRLEQERAQWAQY---RESADRE-IADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 186

Query: 324 IQQELEKLSEKFSENVLDATKKFEKLVTDK-KEID 425
           +   +EK      + + +A  K ++L   K KE++
Sbjct: 187 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELN 221

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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 19/74 (25%), Positives = 39/74 (52%)
 Frame = +3

Query: 285 VALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQT 464
           + LE+ ++E+  + Q E+E L  +F + + +   + EK+  DK + +    + L    Q 
Sbjct: 356 LCLENLRKELSAKHQSEMEDLQNQFQKELAEQRAELEKIFQDKNQAERALRN-LESHHQA 414

Query: 465 AVSKGHENASAENG 506
           A+ K  E+  +E+G
Sbjct: 415 AIEKLREDLQSEHG 428

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>IQG1_YEAST (Q12280) Ras GTPase-activating-like protein IQG1 (IQGAP-related|
            protein 1) (Cytokinesis protein 1)
          Length = 1495

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
 Frame = +3

Query: 249  VEGQIKDAVLGGVALEDE-----QREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDK 413
            ++  IKD VL  V ++ E      R I+  +     KL E  +E VL+ + KFE+ + + 
Sbjct: 1089 IKPHIKD-VLYNVLVDPEYEQEGDRLIYLDMVSPSPKL-ELLTEKVLEISGKFEEYLNEF 1146

Query: 414  KEIDGLPASALGLAAQTAVSKGHENAS-AENGPWMITLDAPSFTAVMQHAKNRALREEVY 590
             E D L            + K  +N+S   +G   + LDA ++  ++   K R + ++V 
Sbjct: 1147 PEADIL---------HDILEKNLDNSSFPRSGRVTLELDASAYRFLVSDDKMRKIYDQVK 1197

Query: 591  RAYLTRASSGDLD 629
            RA++      D+D
Sbjct: 1198 RAFVYMMQIEDVD 1210

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>UGTAP_MOUSE (Q6P6M7) UGA suppressor tRNA-associated protein|
          Length = 504

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 28/114 (24%), Positives = 47/114 (41%)
 Frame = +3

Query: 300 EQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKG 479
           E++E+F  +  +L+KL+E  +E +L        L    K IDG    A+        ++ 
Sbjct: 340 ERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQ 399

Query: 480 HENASAENGPWMITLDAPSFTAVMQHAKNRALREEVYRAYLTRASSGDLDNTDI 641
              A A     + T+   +F   M HA N         AYL  A++  +   D+
Sbjct: 400 VSGARAVPLGNVQTVSGHTFRGFMSHADNYPC------AYLNAAAAIGMKMQDV 447

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>CEA1_SHISO (P21178) Colicin-E1*|
          Length = 521

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
 Frame = +3

Query: 219 DSLSDARKRVVEGQIKDAVLGGVA----LEDEQREIFNQIQQEL-EKLSEKFSENVLDAT 383
           D+L  A+  ++  QIKDAV   V+    L ++  E ++++ QEL +K   K   NV +A 
Sbjct: 330 DNLKTAQTNLLNSQIKDAVDATVSFYQTLSEKYGEKYSKMAQELADKSKGKKISNVNEAL 389

Query: 384 KKFEK 398
             FEK
Sbjct: 390 AAFEK 394

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>RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death protein 11)|
          Length = 1871

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 77   LKAVKDSPDLRSAVEDVQPEXSEILPETGAEQAYLRGLQRHQEFFRLG 220
            L++ + +P+ +S VED +    + + E    + Y+  +Q H  FFRLG
Sbjct: 1297 LRSSRTNPETKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLG 1344

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>NIRA_EMENI (P28348) Nitrogen assimilation transcription factor nirA|
          Length = 892

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = +3

Query: 183 EAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFS 362
           +AF+ +R     D+L D  + +V  + K +     A+  E+ +I    Q E E L+ K S
Sbjct: 112 DAFDLVRQIRSCDNLEDVAQSLVNQEKKSSGWLSNAVIHEENDIAQTDQFESE-LAGKMS 170

Query: 363 ENVLDATKKF 392
             VLD ++KF
Sbjct: 171 NLVLDGSRKF 180

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>UGTAP_HUMAN (Q9HD40) UGA suppressor tRNA-associated protein|
           (tRNA(Ser)Sec-associated antigenic protein) (SLA/LP
           autoantigen) (Soluble liver antigen) (SLA)
           (Liver-pancreas antigen) (LP) (SLA-p35)
          Length = 501

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/114 (22%), Positives = 46/114 (40%)
 Frame = +3

Query: 300 EQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKG 479
           E++E+F+ +  +++KLSE ++E +L        L    K +D     A+        ++ 
Sbjct: 340 ERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQ 399

Query: 480 HENASAENGPWMITLDAPSFTAVMQHAKNRALREEVYRAYLTRASSGDLDNTDI 641
              A       M T+   +F   M H  N         AYL  AS+  +   D+
Sbjct: 400 VSGARVVPLGSMQTVSGYTFRGFMSHTNNYPC------AYLNAASAIGMKMQDV 447

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>SYA_VIBVY (Q7MHR6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 860

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +3

Query: 231 DARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTD 410
           DA+ R  E +++DA     +LE E       IQQ  +KL+ + S N++D  K+   +   
Sbjct: 707 DAQARKFEEKLQDAANKAKSLEKE-------IQQLKDKLASQASANLIDQVKEIAGVKVL 759

Query: 411 KKEIDGLPASAL 446
             ++DG    AL
Sbjct: 760 VAKLDGADNKAL 771

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>SYA_VIBVU (Q8DC49) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 860

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +3

Query: 231 DARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTD 410
           DA+ R  E +++DA     +LE E       IQQ  +KL+ + S N++D  K+   +   
Sbjct: 707 DAQARKFEEKLQDAANKAKSLEKE-------IQQLKDKLASQASANLIDQVKEIAGVKVL 759

Query: 411 KKEIDGLPASAL 446
             ++DG    AL
Sbjct: 760 VAKLDGADNKAL 771

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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
 Frame = +3

Query: 165  QSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLG-----------GVALEDE--Q 305
            + + + EA NA   S + +    A KR +E ++++A  G             ALE+E  Q
Sbjct: 767  EKQQLEEALNA---SQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQ 823

Query: 306  REIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKE 419
            RE+  + + ELE+        V    K+ EK+  D K+
Sbjct: 824  REVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQ 861

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>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non|
            muscle)
          Length = 2116

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
 Frame = +3

Query: 171  KPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALE----DEQREIFNQIQQEL 338
            + I EA   +   S   + SD  ++ +E +I DA+   V  E    ++Q +   +I+ EL
Sbjct: 1958 REIVEAKGRLEEESIARTNSDRSRKRLEAEI-DALTAQVDAEQKAKNQQIKENKKIETEL 2016

Query: 339  EKLSEKFSENVLDATKKF---EKLVTDKK 416
            ++  +KF E+    TK+F   EKL TD K
Sbjct: 2017 KEYRKKFGESEKTKTKEFLVVEKLETDYK 2045

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>RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha)
          Length = 862

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +3

Query: 144 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 323
           +F+LRL Q +  +  +   R S++ + ++D R+R+ EGQ ++ +   +    E  E    
Sbjct: 131 QFHLRLEQERAQWAQY---RESAERE-IADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 186

Query: 324 IQQELEKLSEKFSENVLDATKKFEKLVTDK-KEID 425
           +   +EK      + + +A  K ++L   K KE++
Sbjct: 187 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELN 221

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>CWC26_YARLI (Q6CAX1) Pre-mRNA-splicing factor CWC26|
          Length = 221

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 21/73 (28%), Positives = 29/73 (39%)
 Frame = +3

Query: 201 RNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDA 380
           R    W +LS      VE  +     G +   D+Q  +  Q QQE E    +  EN+L A
Sbjct: 45  RAKGGWKTLSGKAIDPVEETVYRDASGNIISVDDQISVLQQRQQEKEAAERRKKENLLGA 104

Query: 381 TKKFEKLVTDKKE 419
            +  E      KE
Sbjct: 105 VQVEEARKRQAKE 117

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>MFP1_LYCES (P93203) MAR binding filament-like protein 1|
          Length = 697

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +3

Query: 219 DSLSDARKRVVE--GQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKF 392
           +SL +  + V+    +++ A     +LEDE RE+  Q   E +++S++  EN+ DA    
Sbjct: 579 ESLDEINRNVLALAEELELATSRNSSLEDE-REVHRQSVSEQKQISQEAQENLEDAHSLV 637

Query: 393 EKLVTDKKEIDGLPASALGLAAQTAVSKG 479
            KL    KE + L   A  L  + A +KG
Sbjct: 638 MKL---GKERESLEKRAKKLEDEMAAAKG 663

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>RAB1_DISOM (P22125) Ras-related protein ORAB-1|
          Length = 202

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +3

Query: 216 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 377
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 62  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 121

Query: 378 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 473
                TKK     T K+  D L    L  +A+ A +
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 157

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>GRPE_PSYS1 (Q9L516) Protein grpE (HSP-70 cofactor)|
          Length = 199

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
 Frame = +3

Query: 198 IRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLS----EKFSE 365
           I N  D D+   AR   +EG++K+A  G      E  +   +++QE +K      +KF+ 
Sbjct: 46  IENEIDLDTFK-ARIAELEGEVKEAKEGTARANAEAYDAQKRMEQEADKSKKFALQKFAR 104

Query: 366 NVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHEN 488
            +L+     E+ + +    D + A  + L  +  ++  H+N
Sbjct: 105 ELLEIVDNLERAIENADANDPV-AEGVQLTHKALLAVLHKN 144

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>FRZCD_MYXXA (P43500) Frizzy aggregation protein frzCD|
          Length = 417

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +3

Query: 315 FNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKGHE 485
           F+ +  E+ +L+E    NVLD+TK+ + L+T+ +E     A A   A+++A   G +
Sbjct: 281 FSIVAAEMRRLAE----NVLDSTKEIKNLITEIREATAAAAGA-AEASKSATESGEK 332

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>RAB1A_RAT (Q6NYB7) Ras-related protein Rab-1A|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +3

Query: 216 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 377
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 378 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 473
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>RAB1A_MOUSE (P62821) Ras-related protein Rab-1A (YPT1-related protein)|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +3

Query: 216 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 377
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 378 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 473
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>RAB1A_HUMAN (P62820) Ras-related protein Rab-1A (YPT1-related protein)|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +3

Query: 216 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 377
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 378 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 473
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>RAB1A_CANFA (P62822) Ras-related protein Rab-1A|
          Length = 204

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +3

Query: 216 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 377
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 64  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 123

Query: 378 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 473
                TKK     T K+  D L    L  +A+ A +
Sbjct: 124 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 159

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>RAB1A_LYMST (Q05974) Ras-related protein Rab-1A|
          Length = 205

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
 Frame = +3

Query: 216 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLD----- 377
           WD+    R R +         G + + D   +E FN ++Q L+++    SENV       
Sbjct: 65  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 124

Query: 378 ----ATKKFEKLVTDKKEIDGLPASALGLAAQTAVS 473
                TKK     T K+  D L    L  +A+ A +
Sbjct: 125 KSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATN 160

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>RRF_IDILO (Q5QXS3) Ribosome recycling factor (Ribosome-releasing factor)|
           (RRF)
          Length = 185

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +3

Query: 240 KRVVEGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFE 395
           +R   G IKD +      EDE+R      ++E++KL++KF + + +A K  E
Sbjct: 132 RRDANGDIKDLLKEKEITEDEERN----AEEEIQKLTDKFVKQIDEALKAKE 179

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>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 399

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
 Frame = +3

Query: 222 SLSDARKRVVEGQIKDAVLGGVA-LEDEQREIFNQIQQELEKLSEKF----SENVLDATK 386
           S S  ++  +   +KD+ L GV+ L D  +  F       ++L +K     +E    AT 
Sbjct: 12  SFSIPKEGKIGASLKDSTLFGVSSLSDSLKGDFTSSALRCKELRQKVGAVRAETAAPATP 71

Query: 387 KFEKLVTDKKE--------IDGLPASALGLAAQTAVSKGHENASAENGPWMITLDAPSFT 542
              K  ++ K+        I G  +S LGLA   A+        AE+G W + +    + 
Sbjct: 72  AVNKSSSEGKKTLRKGNVVITGA-SSGLGLATAKAL--------AESGKWHVIMACRDYL 122

Query: 543 AVMQHAKNRALREEVY 590
              + AK+  L +E Y
Sbjct: 123 KAARAAKSAGLAKENY 138

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>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
 Frame = +3

Query: 159  LGQSKPIYEAFNAIRNSSD--WDSLSDARKRV-VEGQIKDAVLGGVALEDEQRE-IFNQI 326
            L ++K + E  +  R + +    SL+D   +V  + + KD VLG +AL  E+R+ +  ++
Sbjct: 1496 LKENKSLQEELSLARGTIERLTKSLADVESQVSAQNKEKDTVLGRLALLQEERDKLITEM 1555

Query: 327  QQELEKLSEKFSENVLDATKKFEKLVTDK----KEIDGLPASALGLAAQTAVSKGHENAS 494
             + L + ++  S +        E L  DK    KEI+ L +S   +A  T   + H+   
Sbjct: 1556 DRSLLE-NQSLSSSCESLKLALEGLTEDKEKLVKEIESLKSSK--IAESTEWQEKHKELQ 1612

Query: 495  AE 500
             E
Sbjct: 1613 KE 1614

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>MBB1A_BRARE (Q6DRL5) Myb-binding protein 1A-like protein|
          Length = 1269

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +3

Query: 171 KPIYEAFNAIRNSSDWDSLSDARKRVVEG---QIKDAVLGGVALEDEQREIFNQIQQELE 341
           K I +  N ++NS   D L    KR+V+G     +DA  G      +   +F +I  +  
Sbjct: 51  KAIEDLINYLKNSEQADELKYTLKRLVDGLSHTREDARSGYSVALAQLLSVFEEISLKST 110

Query: 342 KLSEKFSENVLDATKK 389
             S K   N+L A+KK
Sbjct: 111 LNSVKEKHNLLTASKK 126

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>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein p162)|
            (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +3

Query: 204  NSSDWDSLSDARKRVVE---GQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFS---E 365
            N ++    S+ +K+ +E   G++K AVL    LE++ ++   Q  QEL    EK S    
Sbjct: 960  NINELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQN 1019

Query: 366  NVLDATKKFEKLVTD 410
            N   + + F++L +D
Sbjct: 1020 NYEKSQETFKQLQSD 1034

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>SGO2_SCHPO (O13734) Shugoshin-2|
          Length = 647

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
 Frame = +3

Query: 297 DEQREIFNQIQQELEKLSEKFSENVLDATKKF----EKLVTDKKEIDGLPAS-ALGLAAQ 461
           D  REI   +   +   +EKFS  +++ + K     +    +++EI  L  +  + L+++
Sbjct: 403 DTPREINGLVDSSVTNGNEKFSVEIMNDSNKIGLNPKSFTDEEREILTLFRNPPMRLSSE 462

Query: 462 TAVSKGHENASAENGPWMITLDAPSFTAVMQHAKNRALREEVYRAYLTRASSGDLDNTDI 641
              S G   A   N P    L  PS   ++ +A++R    E  R+      +G  +N ++
Sbjct: 463 PPSSNGFSIAHPNNSP----LRPPSLQGIL-NAEDRPYEIEPSRSSFATNDTGSYNNLEL 517

Query: 642 IS 647
           +S
Sbjct: 518 LS 519

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>SECA_STACA (P47994) Preprotein translocase secA subunit|
          Length = 844

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 252 EGQIKDAVLGGVALEDEQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDG 428
           EG++K+  + G   + E  +IF+ +  ++EK  E    N+ D   +FE+++   + IDG
Sbjct: 672 EGEVKEDEIKGKGKDRE--DIFDTVWAKIEKAYEAQKANIPDQFNEFERMIL-LRSIDG 727

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>YPTV1_VOLCA (P31584) GTP-binding protein yptV1|
          Length = 203

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 216 WDSLSDARKRVVEGQIKDAVLGGVALED-EQREIFNQIQQELEKLSEKFSENVLDATKKF 392
           WD+    R R +         G + + D   +E FN ++Q L ++    SENV       
Sbjct: 62  WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGN 121

Query: 393 EKLVTDKKEIDGLPASA 443
           +  +T KK +D   A A
Sbjct: 122 KSDLTGKKVVDYQAAKA 138

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>UGTAP_PONPY (Q5RAK7) UGA suppressor tRNA-associated protein|
          Length = 501

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 25/114 (21%), Positives = 46/114 (40%)
 Frame = +3

Query: 300 EQREIFNQIQQELEKLSEKFSENVLDATKKFEKLVTDKKEIDGLPASALGLAAQTAVSKG 479
           E++E+F+ +  +++KLSE ++E +L        L    K +D     A+        ++ 
Sbjct: 340 ERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHHDKAVTQLGSMLFTRQ 399

Query: 480 HENASAENGPWMITLDAPSFTAVMQHAKNRALREEVYRAYLTRASSGDLDNTDI 641
              A       + T+   +F   M H  N         AYL  AS+  +   D+
Sbjct: 400 VSGARVVPLGSVQTVSGYTFRGFMSHTNNYPC------AYLNAASAIGMKMQDV 447

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>RABE1_HUMAN (Q15276) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha) (Rabaptin-4) (NY-REN-17 antigen)
          Length = 862

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +3

Query: 144 KFYLRLGQSKPIYEAFNAIRNSSDWDSLSDARKRVVEGQIKDAVLGGVALEDEQREIFNQ 323
           +F+LRL Q +  +  +           ++D R+R+ EGQ ++ +   +    E  E    
Sbjct: 131 QFHLRLEQERTQWAQYREYAERE----IADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 186

Query: 324 IQQELEKLSEKFSENVLDATKKFEKLVTDK-KEID 425
           +   +EK      + + +A  K ++L   K KE++
Sbjct: 187 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELN 221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,091,256
Number of Sequences: 219361
Number of extensions: 1218224
Number of successful extensions: 5080
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 4894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5074
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result