Clone Information

BLAST Search Result

Clone Name	baalh13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP...	37	0.046
2	CN092_MOUSE (Q8BU11) Epidermal Langerhans cell protein LCP1	36	0.078
3	PUS2_YEAST (P53167) tRNA pseudouridine synthase 2 (EC 5.4.99.-) ...	35	0.13
4	MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p...	35	0.17
5	UNC52_CAEEL (Q06561) Basement membrane proteoglycan precursor (P...	34	0.39
6	CN092_RAT (Q99PM1) Epidermal Langerhans cell protein LCP1	33	0.51
7	SKI_CHICK (P49140) Ski oncogene (C-ski)	33	0.66
8	PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associ...	33	0.66
9	SRP40_YEAST (P32583) Suppressor protein SRP40	33	0.87
10	MSP8_EIMAC (P09125) Merozoite surface protein CMZ-8 (Fragment)	33	0.87
11	TNKS2_HUMAN (Q9H2K2) Tankyrase 2 (EC 2.4.2.30) (TANK2) (Tankyras...	32	1.5
12	GPR64_MOUSE (Q8CJ12) G-protein coupled receptor 64 precursor (Ep...	32	1.5
13	SON_MOUSE (Q9QX47) SON protein	32	1.5
14	VILI3_ARATH (O81645) Villin-3	32	1.5
15	ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein ...	32	1.9
16	SWR1_ASPFU (Q4WAS9) Helicase swr1 (EC 3.6.1.-)	32	1.9
17	ARGB_MORAB (Q9K4Z0) Acetylglutamate kinase (EC 2.7.2.8) (NAG kin...	31	2.5
18	ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC...	31	2.5
19	MARK2_HUMAN (Q7KZI7) Serine/threonine-protein kinase MARK2 (EC 2...	31	2.5
20	IGA0_HAEIN (P44969) Immunoglobulin A1 protease precursor (EC 3.4...	31	3.3
21	MARK2_MOUSE (Q05512) Serine/threonine-protein kinase MARK2 (EC 2...	31	3.3
22	SKI_HUMAN (P12755) Ski oncogene (C-ski)	31	3.3
23	POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)	31	3.3
24	CLFB_STAAR (Q6GDH2) Clumping factor B precursor (Fibrinogen-bind...	31	3.3
25	CAD23_HUMAN (Q9H251) Cadherin-23 precursor (Otocadherin)	30	4.3
26	RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (N...	30	4.3
27	TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding prote...	30	4.3
28	AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Pro...	30	5.6
29	ABI3_HUMAN (Q9P2A4) ABI gene family member 3 (New molecule inclu...	30	5.6
30	SSRP1_HUMAN (Q08945) Structure-specific recognition protein 1 (S...	30	5.6
31	ABP1_SACEX (P38479) Actin-binding protein	30	5.6
32	CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cycli...	30	5.6
33	ITB2_MOUSE (P11835) Integrin beta-2 precursor (Cell surface adhe...	30	5.6
34	ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule inclu...	30	5.6
35	PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM ...	30	7.3
36	NET2_HUMAN (O00634) Netrin-2-like protein precursor	30	7.3
37	GP137_HUMAN (Q14444) GPI-anchored protein p137 (p137GPI) (Membra...	30	7.3
38	FUTSC_DROME (Q9W596) Microtubule-associated protein futsch	30	7.3
39	ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Aggl...	29	9.6
40	HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)	29	9.6
41	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	29	9.6
42	HXA3_HETFR (Q9IA21) Homeobox protein Hox-A3	29	9.6

>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +2

Query: 125 LMKLQGKIQEDEFPIVSTPK---EPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLA 295
           L +L G +   E P   TP     PP  +A P+ P A   + T NPP     +P  NP A
Sbjct: 207 LSELLGVMSLPEAPAAETPAPAANPPAPTANPTGPAANPPATTANPP-----APAANPSA 261

Query: 296 VPADERATQRTPCATEACSSSGENSP 373
             A        P A  A S+   + P
Sbjct: 262 PAATPTGPAANPPAPAASSTPHGHCP 287

to top

>CN092_MOUSE (Q8BU11) Epidermal Langerhans cell protein LCP1|
          Length = 619

 Score = 36.2 bits (82), Expect = 0.078
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 146 IQEDEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLA 295
           ++ D  P   TP  PPV++A+P+ P  A       PPC+   S L + +A
Sbjct: 303 VELDPVPQSQTPSPPPVTTADPASPAPASTESPALPPCIIVNSTLSSYVA 352

to top

>PUS2_YEAST (P53167) tRNA pseudouridine synthase 2 (EC 5.4.99.-) (tRNA-uridine|
           isomerase 2) (tRNA pseudouridylate synthase 2)
          Length = 370

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 291 WLCLRMRGQHKGHHVQQKLVLLAVRTLRCSMQPLLVTN 404
           W+C+R+ GQ    H  +++V LAV   RC + P +V N
Sbjct: 246 WICVRIHGQSFMLHQIRRMVALAVLAARCQLPPNIVRN 283

to top

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
           (ALL1-related protein)
          Length = 5262

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +2

Query: 182 KEPPVSSAEPSQPRAAVESVTVNPPCLAKLSP--LENPLAVPADERATQRTPCATEACSS 355
           +E P+S  E S P  A+E+    PP  + LSP   E+PL+ P +E  T   P A+   S 
Sbjct: 516 EESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASR-LSP 574

Query: 356 SGENSPV 376
             E SP+
Sbjct: 575 PPEESPM 581



 Score = 32.7 bits (73), Expect = 0.87
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 155 DEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSP-LENPLAVPAD 307
           +E P+   P+E P+S    S P + +E   ++PP  +  SP LE PL+ P +
Sbjct: 490 EESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPE 541

to top

>UNC52_CAEEL (Q06561) Basement membrane proteoglycan precursor (Perlecan homolog)|
            (Uncoordinated protein 52)
          Length = 3375

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 8/156 (5%)
 Frame = +2

Query: 158  EFPIVSTPKEPPVSSAEPS---QPRAAVE----SVTVNPPCLAKLSPLENP-LAVPADER 313
            E PI   P E P ++ EP+   +P    E    + T  P  + + S  ++P + +P +  
Sbjct: 2997 EEPITEEPTEEPTTTEEPTTTEEPTTTTEEPTTTTTEEPYHIYETSRDDDPEIIIPVETT 3056

Query: 314  ATQRTPCATEACSSSGENSPVFYAAIAGNEHENIQDNDSERSSIISNSYAGDNDRDEILQ 493
             T  T  +T   +   E  P         E  ++ D + E S+I  ++ + DN  D    
Sbjct: 3057 TTSTTTTST---TEEPEAEPALVLPTDPVEENDVSDEEEEISTI--STVSPDNGLDS--- 3108

Query: 494  XXXXXXXXXXXXXXXXEAATSDKTADPDGSSEKAVV 601
                            ++  S+ T  PD SSE+ VV
Sbjct: 3109 ----------------DSDYSEGTLPPDSSSEEIVV 3128

to top

>CN092_RAT (Q99PM1) Epidermal Langerhans cell protein LCP1|
          Length = 619

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 146 IQEDEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLA 295
           ++ D  P   TP  PPV++A+P+ P  A        PC+   S L + +A
Sbjct: 303 VELDPVPQSQTPSPPPVTTADPASPAPASTESPALSPCIVVNSTLSSYVA 352

to top

>SKI_CHICK (P49140) Ski oncogene (C-ski)|
          Length = 750

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
 Frame = +2

Query: 167 IVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLEN-----PLAVPADERATQ--- 322
           +VS   EPP S+A+P + + A E+  V  P     +P E+      + V   E  T    
Sbjct: 457 VVSRSSEPPSSAAQPRKRKHAAETPAVPEPVATVTAPEEDKESEAEIEVETREEFTSSLS 516

Query: 323 --RTPCATEACSSSGENSPVFYAAIAGNEHENIQDNDSERSS 442
              +P  T + S+   +SP   A +  N    +  +    SS
Sbjct: 517 SLSSPSFTSSSSAKDMSSPGMQAPVPVNSSYEVAAHSDSHSS 558

to top

>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein|
           (PC2 glutamine/Q-rich-associated protein) (TPA-inducible
           gene 1 protein) (TIG-1) (Activator-recruited cofactor
           105 kDa component) (ARC105) (CTG repeat protein 7a)
          Length = 788

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +2

Query: 170 VSTPKE---PPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCAT 340
           V TP+    PP  S +P QP +   S   + P  +  S L +P   P+    T RTP   
Sbjct: 442 VQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNF 501

Query: 341 EACSSSGENSPV 376
              S    N+PV
Sbjct: 502 SVPSPGPLNTPV 513

to top

>SRP40_YEAST (P32583) Suppressor protein SRP40|
          Length = 406

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 23/97 (23%), Positives = 44/97 (45%)
 Frame = +2

Query: 305 DERATQRTPCATEACSSSGENSPVFYAAIAGNEHENIQDNDSERSSIISNSYAGDNDRDE 484
           D + T++     E+ SSS E+S    ++ + +E  +  D+DS  SS    S + D++ D 
Sbjct: 137 DAKETKKAKTEPES-SSSSESSSSGSSSSSESESGSESDSDSSSSS----SSSSDSESDS 191

Query: 485 ILQXXXXXXXXXXXXXXXXEAATSDKTADPDGSSEKA 595
                              ++++SD ++D D SS  +
Sbjct: 192 ESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSS 228

to top

>MSP8_EIMAC (P09125) Merozoite surface protein CMZ-8 (Fragment)|
          Length = 259

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           STP  PP +   P     +  S  V+PP    +SP   P++ P+   +   TP +  +  
Sbjct: 43  STPVSPPSTPVSPPSTPVSPPSTPVSPPS-TPVSPPSTPVSPPSTPVSPPSTPVSPPSTP 101

Query: 353 SSGENSPVFYAAIAGNEHENIQDNDSE 433
            S  +SP    A+ G      Q + SE
Sbjct: 102 VSPPSSPA-PGAVGGVNSSLSQRSTSE 127



 Score = 32.7 bits (73), Expect = 0.87
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           STP  PP +   P     +  S  V+PP    +SP   P++ P+   +   TP +  +  
Sbjct: 36  STPVSPPSTPVSPPSTPVSPPSTPVSPPS-TPVSPPSTPVSPPSTPVSPPSTPVSPPSTP 94

Query: 353 SSGENSPV 376
            S  ++PV
Sbjct: 95  VSPPSTPV 102



 Score = 32.7 bits (73), Expect = 0.87
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           STP  PP +   P     +  S  V+PP    +SP   P++ P+   +   TP +  +  
Sbjct: 29  STPVSPPSTPVSPPSTPVSPPSTPVSPPS-TPVSPPSTPVSPPSTPVSPPSTPVSPPSTP 87

Query: 353 SSGENSPV 376
            S  ++PV
Sbjct: 88  VSPPSTPV 95



 Score = 32.7 bits (73), Expect = 0.87
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           STP  PP +   P     +  S  V+PP    +SP   P++ P+   +   TP +  +  
Sbjct: 22  STPVSPPSTPVSPPSTPVSPPSTPVSPPS-TPVSPPSTPVSPPSTPVSPPSTPVSPPSTP 80

Query: 353 SSGENSPV 376
            S  ++PV
Sbjct: 81  VSPPSTPV 88



 Score = 32.7 bits (73), Expect = 0.87
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           STP  PP +   P     +  S  V+PP    +SP   P++ P+   +   TP +  +  
Sbjct: 15  STPVSPPSTPVSPPSTPVSPPSTPVSPPS-TPVSPPSTPVSPPSTPVSPPSTPVSPPSTP 73

Query: 353 SSGENSPV 376
            S  ++PV
Sbjct: 74  VSPPSTPV 81



 Score = 32.7 bits (73), Expect = 0.87
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           STP  PP +   P     +  S  V+PP    +SP   P++ P+   +   TP +  +  
Sbjct: 8   STPVSPPSTPVSPPSTPVSPPSTPVSPPS-TPVSPPSTPVSPPSTPVSPPSTPVSPPSTP 66

Query: 353 SSGENSPV 376
            S  ++PV
Sbjct: 67  VSPPSTPV 74

to top

>TNKS2_HUMAN (Q9H2K2) Tankyrase 2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2)|
            (TRF1-interacting ankyrin-related ADP-ribose polymerase
            2) (Tankyrase-like protein) (Tankyrase-related protein)
          Length = 1166

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 25/91 (27%), Positives = 41/91 (45%)
 Frame = +2

Query: 185  EPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACSSSGE 364
            +P + + E   P   V +  V+    A + P   P           R+P AT    SSG 
Sbjct: 770  DPTLKNQEGQTPLDLVSADDVSALLTAAMPPSALPSCYKPQVLNGVRSPGATADALSSGP 829

Query: 365  NSPVFYAAIAGNEHENIQDNDSERSSIISNS 457
            +SP   +  A +  +N+  + SE SS++S+S
Sbjct: 830  SSP--SSLSAASSLDNLSGSFSELSSVVSSS 858

to top

>GPR64_MOUSE (Q8CJ12) G-protein coupled receptor 64 precursor|
           (Epididymis-specific protein 6) (Me6 receptor)
          Length = 1009

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +2

Query: 125 LMKLQGKIQEDEFPIVSTPKEPPV-SSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVP 301
           L KLQ ++Q+    +   P  PP+ SS++P  P+A + S   +   LA+  PL++ L  P
Sbjct: 224 LEKLQCELQDPIVCLADQPHGPPLSSSSKPVVPQATIISHVASDFSLAE--PLDHALMTP 281

Query: 302 ADERATQRT 328
           +    TQ +
Sbjct: 282 STPSLTQES 290

to top

>SON_MOUSE (Q9QX47) SON protein|
          Length = 2404

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
 Frame = +2

Query: 158  EFPIVSTPKEPPVSSAEPSQPRAAVESV----TVNPPCLAKLSPLENPLAVPADERATQR 325
            E P+V+  + PPV+  EP  P  AV  +     V  P +A   PL     V A E  T  
Sbjct: 1312 ESPVVAVTEIPPVAVPEP--PIMAVPELPTMAVVKTPAVAVPEPL-----VAAPEPPTMA 1364

Query: 326  TPCATEACSSSGENSPVFYA---AIAGNEH 406
            TP   E CS S    PV  +   A+A  EH
Sbjct: 1365 TP---ELCSLSVSEPPVAVSELPALADPEH 1391

to top

>VILI3_ARATH (O81645) Villin-3|
          Length = 966

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
 Frame = +2

Query: 182  KEPPVSS---AEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
            K PP  S   ++ SQ  AAV +++       K SP  +P A   DE  +     ATE  +
Sbjct: 813  KSPPRRSGLTSQASQRAAAVAALSQVLTAEKKKSPDTSPSAEAKDEETSFSEVEATEEAT 872

Query: 353  SSGENSPVFYAAIAGNEHENIQDNDSE 433
             + E   V  AA A  E    + +DSE
Sbjct: 873  EAKEEEEVSPAAEASAEEAKPKQDDSE 899

to top

>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)|
          Length = 1168

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +2

Query: 179  PKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLEN--PLAVPADE--RATQRTPCATEA 346
            P  P  +SA P+Q  +A+ + T   P    +SP ++  P AVP      A   +P  T +
Sbjct: 912  PGSPQAASALPTQNSSALNAATSAQPASTGISPSQSTVPPAVPTHTPGPAPSPSPALTHS 971

Query: 347  CSSSGENSPVFYAAIAGNEHEN 412
             + S   S   Y +  GN + N
Sbjct: 972  TAQSDSTS---YISAVGNTNAN 990

to top

>SWR1_ASPFU (Q4WAS9) Helicase swr1 (EC 3.6.1.-)|
          Length = 1695

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 164 PIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATE 343
           P+  TP E P   AE      A  + +  P  L   +PLE+ +A+  D+R      C  +
Sbjct: 701 PVTETPDEEPDEQAEVVDTDMAAAAPSEGPAPLEASAPLEDLVAI--DKRGDAMGECHRQ 758

Query: 344 ACS 352
            CS
Sbjct: 759 QCS 761

to top

>ARGB_MORAB (Q9K4Z0) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 263

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 312 LSSAGTARGFSS-GLSLARHGGFTVTLSTAALGCEGSAE 199
           L + G   GF+  GL+LA  G  TVTLSTA LG  G  E
Sbjct: 93  LMAQGIKLGFNVVGLTLADGGISTVTLSTAGLGAVGECE 131

to top

>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
            2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/71 (32%), Positives = 35/71 (49%)
 Frame = +2

Query: 113  VWGGLMKLQGKIQEDEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPL 292
            +WG +   Q +   D F ++ T  EP +  A P  P+ A+    V  P L+ L+P  + L
Sbjct: 2760 MWGVIRCAQAE-SPDRFVLLDTDAEPGMLPAVPDNPQLALRGDDVFVPRLSPLAP--SAL 2816

Query: 293  AVPADERATQR 325
             +PA    TQR
Sbjct: 2817 TLPA---GTQR 2824

to top

>MARK2_HUMAN (Q7KZI7) Serine/threonine-protein kinase MARK2 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase 2) (ELKL
           motif kinase) (EMK1) (PAR1 homolog)
          Length = 788

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 194 VSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEAC---SSSG 361
           VS+A P Q + ++ S +V+P   + L P E+   VP    A QR P A+ +    SSSG
Sbjct: 522 VSAARPRQHQKSM-SASVHPNKASGLPPTESNCEVPRPSTAPQRVPVASPSAHNISSSG 579

to top

>IGA0_HAEIN (P44969) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1|
            protease)
          Length = 1694

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 28/111 (25%), Positives = 42/111 (37%)
 Frame = +2

Query: 155  DEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPC 334
            +E   V TP  PP     P+ P    E+V  N    +K           A E   Q    
Sbjct: 1021 EEIARVETPVPPPA----PATPSETTETVAENSKQESKTVEKNEQ---DATETTAQNGEV 1073

Query: 335  ATEACSSSGENSPVFYAAIAGNEHENIQDNDSERSSIISNSYAGDNDRDEI 487
            A EA  S   N+     A +G+E E  Q  + + ++ +        ++DEI
Sbjct: 1074 AEEAKPSVKANTQTNEVAQSGSETEETQTTEIKETAKVEKEEKAKVEKDEI 1124

to top

>MARK2_MOUSE (Q05512) Serine/threonine-protein kinase MARK2 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase 2) (ELKL
           Motif Kinase) (EMK1)
          Length = 776

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = +2

Query: 194 VSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEAC----SSSG 361
           VS+A P Q + ++ S +V+P   + L P E+   VP    A QR P A+ +     SSSG
Sbjct: 519 VSAARPRQHQKSM-SASVHPNKASGLPPTESNCEVPRPSTAPQRVPVASPSAHNISSSSG 577

to top

>SKI_HUMAN (P12755) Ski oncogene (C-ski)|
          Length = 728

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
 Frame = +2

Query: 176 TPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAV---PADERATQRTPCATEA 346
           T   P V+ A P+Q     + V  +PPC A +S    PLA    P   + T  TP A E 
Sbjct: 413 TAVAPNVALAPPAQ-----QKVVSSPPCAAAVSRAPEPLATCTQPRKRKLTVDTPGAPET 467

Query: 347 CS--SSGENSPVFYAAIAGNEHENIQDNDSERSSIISNSYAGDNDRDEI 487
            +  ++ E      A +   E E+ ++  S  SS+ S S+   +   ++
Sbjct: 468 LAPVAAPEEDKDSEAEV---EVESREEFTSSLSSLSSPSFTSSSSAKDL 513

to top

>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1874

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 164 PIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADE-RATQRTPCAT 340
           P+ S+P  PP     PSQP  +    T  P   A+ +P E  LA P  E +     P   
Sbjct: 617 PVNSSPLFPPPPPLPPSQPPLSQGPATQAPS--AQPTPGEPLLAPPTTELKPESSNPNNP 674

Query: 341 EACSSSGENSP 373
              SS+G N P
Sbjct: 675 NPSSSAGSNPP 685

to top

>CLFB_STAAR (Q6GDH2) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 873

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 31/142 (21%), Positives = 52/142 (36%)
 Frame = +2

Query: 164 PIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATE 343
           P+  TP  PPV      +P    E            SP   P   P  E + +  P  ++
Sbjct: 543 PVDPTPG-PPVDPEPEPEPTPDPEP-----------SPEPEPEPTPDPEPSPEPDP-DSD 589

Query: 344 ACSSSGENSPVFYAAIAGNEHENIQDNDSERSSIISNSYAGDNDRDEILQXXXXXXXXXX 523
           + S SG +S       +G++ ++  D+DS+  S  ++    D+D D              
Sbjct: 590 SDSDSGSDSD------SGSDSDSDSDSDSDSDSDSNSDSESDSDSDSDSDSDSDSDSDSD 643

Query: 524 XXXXXXEAATSDKTADPDGSSE 589
                   + SD  +D D  S+
Sbjct: 644 SDSDSDSDSESDSDSDSDSDSD 665

to top

>CAD23_HUMAN (Q9H251) Cadherin-23 precursor (Otocadherin)|
          Length = 3354

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
 Frame = +2

Query: 191  PVSSAEPSQPRAAVESVTVNPPCLA---KLSPLENPLAVPADE-RATQRTPCATEACSSS 358
            P  + +P Q   A+E +  N P      K SP    L VP    R T          +  
Sbjct: 2701 PYETMQPLQ--VALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPRGTLVGNVTGAVDADE 2758

Query: 359  GENSPVFYAAIAGNEHEN-----------IQDNDSERSSIIS 451
            G N+ V+Y   AGNE +N           ++D D ER +I S
Sbjct: 2759 GPNAIVYYFIAAGNEEKNFHLQPDGCLLVLRDLDREREAIFS 2800

to top

>RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
          Length = 1162

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +2

Query: 164 PIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQR 325
           P  S P  PP ++  PS+     E     PP  A  SPL  P A P+   A +R
Sbjct: 110 PAASAPSLPPAAAVLPSKLPEDDEP-PARPPAPAGASPLAEPAAPPSTPAAPKR 162

to top

>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +2

Query: 149 QEDEFPIVSTPKEPPVSSAEPSQPRAAVE---SVTVNPPCLAKLSPLENPLAVPADERAT 319
           +++E  + S P  PPV S  P  P  +       +  PP ++   PL +P   PA E+  
Sbjct: 32  EKEEAKLPSPPLTPPVPSPPPPLPPPSTSPPPPASPLPPPVSPPPPL-SPPPYPAPEKQE 90

Query: 320 QRTPCATEACSSSGENSPV 376
           +  P     CS      P+
Sbjct: 91  ESPPLVPATCSRKRGRPPL 109

to top

>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene|
           AF4) (FEL protein)
          Length = 1210

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +2

Query: 176 TPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACSS 355
           TP++PP SSA PS P++  E     P   A  S  E+     +D  +   +  ++   S 
Sbjct: 440 TPEKPPSSSAPPSAPQSLPE-----PVASAHSSSAESESTSDSDSSSDSESESSS---SD 491

Query: 356 SGENSPV 376
           S EN P+
Sbjct: 492 SEENEPL 498

to top

>ABI3_HUMAN (Q9P2A4) ABI gene family member 3 (New molecule including SH3)|
           (Nesh)
          Length = 366

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +2

Query: 173 STPKEPPV-SSAEPSQPRAAVESVTVNPPCLAKLS--PLENPLAVPAD 307
           + P  PP+ SS +P  P AAVE V   PP L +LS  P +  L +P D
Sbjct: 230 AAPPAPPLPSSLDPPPPPAAVE-VFQRPPTLEELSPPPPDEELPLPLD 276

to top

>SSRP1_HUMAN (Q08945) Structure-specific recognition protein 1 (SSRP1)|
           (Recombination signal sequence recognition protein)
           (T160) (Chromatin-specific transcription elongation
           factor 80 kDa subunit) (FACT 80 kDa subunit)
          Length = 709

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +2

Query: 308 ERATQRTPCATEACSSSGENSPVFYAAIAGNEHENIQDNDSERSSIISNSYAGDNDRDE 484
           E    R   A ++   SGE +   +    G E E++ +     +S  S+S  GD+DRDE
Sbjct: 458 EEGKIREENANDSSDDSGEETDESFNP--GEEEEDVAEEFDSNASASSSSNEGDSDRDE 514

to top

>ABP1_SACEX (P38479) Actin-binding protein|
          Length = 617

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
 Frame = +2

Query: 149 QEDEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRT 328
           +E+E P  S P        EP QP+   E      P L    P    +  P  +RA +  
Sbjct: 498 EEEEAPAPSLPSRNAAPEPEPEQPQEEEEEEEAPAPSL----PSRGSVPPPPPQRAVEPE 553

Query: 329 PCATEACSSSGENSPVFYAAIAGNEHE-NIQDND 427
             A EA  ++ E     Y   AG ++E    +ND
Sbjct: 554 EPAAEAPWATAE-----YDYEAGEDNELTFAEND 582

to top

>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent|
           kinase inhibitor p57) (p57KIP2)
          Length = 316

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 23/88 (26%), Positives = 32/88 (36%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           STP   PV +  P+   A V +    P  +A L+P   P   PA   A    P    A +
Sbjct: 146 STPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPA 205

Query: 353 SSGENSPVFYAAIAGNEHENIQDNDSER 436
            +   +P      A  E      N  +R
Sbjct: 206 PAPAPAPAPAPDAAPQESAEQGANQGQR 233

to top

>ITB2_MOUSE (P11835) Integrin beta-2 precursor (Cell surface adhesion|
           glycoproteins LFA-1/CR3/P150,95 beta-subunit)
           (Complement receptor C3 beta-subunit) (CD18 antigen)
          Length = 771

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
 Frame = +1

Query: 166 YC----LNSQGASSEFCRAFTTKS-SCGKCNCKPTVPG*T-QPTRESSGC------ACG* 309
           YC    +N +  +S+ C      S +CGKC+CKP   G   Q  R ++GC       C  
Sbjct: 534 YCECDNVNCERYNSQVCGGSDRGSCNCGKCSCKPGYEGSACQCQRSTTGCLNARLVECSG 593

Query: 310 EGNTKDTMCNRSL 348
            G+ +   CNR +
Sbjct: 594 RGHCQ---CNRCI 603

to top

>ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule including SH3)|
           (Nesh)
          Length = 367

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVP 301
           +TP  PPV+   P  P  + E     PP      PLE  L +P
Sbjct: 236 ATPPPPPVAPVTPPPPPLSAEVFLPPPPLEVSQPPLEAELPLP 278

to top

>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa)
          Length = 1200

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +2

Query: 182 KEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCAT 340
           + P  SS+EP++  AA  +    P   + L+PL +PLA P    ++   P AT
Sbjct: 581 ESPAPSSSEPAE--AATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAAT 631

to top

>NET2_HUMAN (O00634) Netrin-2-like protein precursor|
          Length = 580

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = +1

Query: 172 LNSQGASSEFCRAFTTKSSCGKCNCKPTV---PG*TQPTRESSGC-ACG*EGNTKDTMCN 339
           L++QG     CR  T    CG+  CKP     P      RES  C AC   G+ +    N
Sbjct: 266 LDTQGHLICDCRHGTEGPDCGR--CKPFYCDRPWQRATARESHACLACSCNGHARRCRFN 323

Query: 340 RSLFF*R*ELSGVLCSHC 393
             L+      SG +C +C
Sbjct: 324 MELYRLSGRRSGGVCLNC 341

to top

>GP137_HUMAN (Q14444) GPI-anchored protein p137 (p137GPI) (Membrane component|
           chromosome 11 surface marker 1)
          Length = 649

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 22/104 (21%), Positives = 42/104 (40%)
 Frame = +2

Query: 146 IQEDEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQR 325
           IQ+      +   +P + SA+P  P   ++   +  P +   S L  P  VP    ATQ 
Sbjct: 320 IQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQ- 378

Query: 326 TPCATEACSSSGENSPVFYAAIAGNEHENIQDNDSERSSIISNS 457
            P  +        + P++  + A  +    +  D  +++I  N+
Sbjct: 379 VPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNT 422

to top

>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch|
          Length = 5412

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
 Frame = +2

Query: 152  EDEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPL-AVPADERATQRT 328
            +DE     + ++ P++S E S+P + +ESV   P    + S  E+   +  AD    +++
Sbjct: 1637 KDESAKPESRRDSPLASKEASRPESVLESVKDEPIKSTEKSRRESVAESFKADSTKDEKS 1696

Query: 329  PCATEACS---SSGENSPVFYAAIAGNEHENI-QDNDSERSSIISNSYAGDNDRDE 484
            P  ++  S   S+ EN      +   ++ E++    D  R   ++ S   D D+ E
Sbjct: 1697 PLTSKDISRPESAVENVMDAVGSAERSQPESVTASRDVSRPESVAESEKDDTDKPE 1752



 Score = 29.3 bits (64), Expect = 9.6
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 22/137 (16%)
 Frame = +2

Query: 140  GKIQED-------EFPIVSTP------KEPPVSSAEPSQPRAAVESV-------TVNPPC 259
            G ++ED       + P+ S P      K+ P +S E S+P +  ESV             
Sbjct: 1443 GSVKEDTEQTKSKKSPVPSRPESEAKDKKSPFASGEASRPESVAESVKDEAGKAESRRES 1502

Query: 260  LAKLSPLENPLAVPADERATQRTPCATEACSSSGENSPVFYAAIAGNEHENIQDNDSE-- 433
            +AK    E+ L   A E+ ++R   A      SG +     A+   +  E++ D   E  
Sbjct: 1503 IAKTHKDESSLD-KAKEQESRRESLAESIKPESGIDEKSALASKEASRPESVTDKSKEPS 1561

Query: 434  RSSIISNSYAGDNDRDE 484
            R   I+ S   ++ +DE
Sbjct: 1562 RRESIAESLKAESTKDE 1578

to top

>ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Agglutinin-like|
           adhesin)
          Length = 1419

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 30/127 (23%), Positives = 46/127 (36%), Gaps = 23/127 (18%)
 Frame = +2

Query: 167 IVSTPKEPPVSSAEP-SQPRAAVESVTVNP---PCLAKLSPLENPLAVPADERATQRTPC 334
           IV  P  P V++ E  S+  A  E++T  P     +    PLE   +  A E +      
Sbjct: 609 IVREPHNPTVTTTEFWSESYATTETITTGPLGTDSIVIHDPLEESSSTTAIESSDSNISS 668

Query: 335 ATEACSSSGENSPVFYA-------------------AIAGNEHENIQDNDSERSSIISNS 457
           + +  SSS E S                         +  +E   +   DS+ SS I +S
Sbjct: 669 SAQESSSSVEQSSSIVGLSSSSDIPLSSDMPSSSSTGLTSSESSTVSSYDSDSSSSIESS 728

Query: 458 YAGDNDR 478
               +DR
Sbjct: 729 TLSSSDR 735

to top

>HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)|
          Length = 388

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = +2

Query: 173 STPKEPPVSSAEPSQPRAAVESVTVNPPCLAKLSPLENPLAVPADERATQRTPCATEACS 352
           S P E P S+A  +   AA  +        A  S    P    A E A Q +PC+  A S
Sbjct: 107 SAPGEAPPSAAAAAAAAAAAAAAAA----AASSSGGPGPAGPAAAEAAKQCSPCSAAAQS 162

Query: 353 SSG 361
           SSG
Sbjct: 163 SSG 165

to top

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
 Frame = +2

Query: 188 PPVSSAEPSQPRAAVESVTVNPPC----LAKLSPLENPLAVPADERATQR------TPCA 337
           PP S + PSQ      S TV P      ++ +SP   P A  A +  ++        P  
Sbjct: 721 PPSSGSLPSQDLLGTSSATVTPAVHSDFVSGVSPHNAPSAGWAGDAGSRTCSPAPIPPHT 780

Query: 338 TEACSSSGENSP 373
           +++CS SG  SP
Sbjct: 781 SDSCSKSGAASP 792

to top

>HXA3_HETFR (Q9IA21) Homeobox protein Hox-A3|
          Length = 410

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +2

Query: 149 QEDEFPIVSTPKEPPVSSAEPSQPRAAVESVTVNPPCL--AKLSPLENPLAVPADERATQ 322
           Q+ + P    P  P VS  + +   +   S + NP     A +S    P    + + A Q
Sbjct: 87  QQKQPPPPPPPPPPSVSPPQNTSSNSTQSSTSKNPTLTSQATISKQIFPWMKESRQNAKQ 146

Query: 323 RTPCATEACSSSGENSP 373
           +T  ++   SS+GE SP
Sbjct: 147 KTSSSSSVESSAGEKSP 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,107,893
Number of Sequences: 219361
Number of extensions: 1553224
Number of successful extensions: 7062
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 5497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6641
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result