>NHR71_CAEEL (Q9GTD4) Nuclear hormone receptor family member nhr-71|
          Length = 579

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 488 CAEDERG*AICRSCGMSKCIGRGAFRLRGKQPRK--RGSTKRKRE 616
           C  D  G   CRSC  +KCI  G  ++   QPR+   GS K +R+
Sbjct: 53  CLIDPDGRCACRSCRFTKCIEAG-MKIGAVQPRRDPTGSQKERRK 96

>POF13_SCHPO (O94334) F-box protein pof13|
          Length = 396

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 304 TLTPVIFGSYLVFRVCLDLVPLAQPAPKQCFTPRCPVNCC 185
           TLT       ++F+  LD +P     P +C   RCP+N C
Sbjct: 223 TLTSNWHSRVILFQNALDALPTTHGNPVECDISRCPLNAC 262

>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 748

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = -2

Query: 578 ASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKGWLLLGKPPGCLCTPTS 399
           ASL  G L Y+ +L SHS     +   L  +      YY LF  + L G     L    S
Sbjct: 236 ASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNS 295

Query: 398 FI 393
            I
Sbjct: 296 SI 297

>YPAH_PSELE (P52089) UPF0178 protein in pahZ1 5'region|
          Length = 154

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 117 VVVRGEMPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASG 245
           V+ +G +PL PR  W++   + AQQLT    ++   G+G  +G
Sbjct: 82  VLEKGGLPLNPRGEWYTKDTI-AQQLTMRAFMEELRGSGVDTG 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,079,080
Number of Sequences: 219361
Number of extensions: 1945487
Number of successful extensions: 4574
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4573
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)