ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baali02 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 392 bits (1006), Expect = e-109 Identities = 194/195 (99%), Positives = 194/195 (99%) Frame = +2 Query: 68 FSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGL 247 FSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGL Sbjct: 5 FSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGL 64 Query: 248 AYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIA 427 AYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIA Sbjct: 65 AYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIA 124 Query: 428 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 607 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL Sbjct: 125 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 184 Query: 608 ESGNAGEPAKLIRQR 652 ESGNAGEPAKLIRQR Sbjct: 185 ESGNAGEPAKLIRQR 199
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 353 bits (905), Expect = 3e-97 Identities = 178/197 (90%), Positives = 185/197 (93%), Gaps = 2/197 (1%) Frame = +2 Query: 68 FSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWK 241 FSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS NRF VMA E +DE + TD +WK Sbjct: 5 FSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWK 63 Query: 242 GLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFY 421 GLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFY Sbjct: 64 GLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFY 123 Query: 422 IAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAG 601 IAP+FMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAG Sbjct: 124 IAPSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAG 183 Query: 602 ELESGNAGEPAKLIRQR 652 ELESGN GEPAKLIRQR Sbjct: 184 ELESGN-GEPAKLIRQR 199
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 320 bits (820), Expect = 2e-87 Identities = 163/201 (81%), Positives = 178/201 (88%), Gaps = 6/201 (2%) Frame = +2 Query: 68 FSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD- 232 FSSTVGAPASTPT +FLGKKL K QV++AV YHGKSS +N RF MAA+ +DE + TD Sbjct: 5 FSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDE 64 Query: 233 -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 409 +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M Sbjct: 65 DRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMM 124 Query: 410 GGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 589 GFYIA FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIM Sbjct: 125 DGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIM 184 Query: 590 MSAGELESGNAGEPAKLIRQR 652 MSAGELESGNAGEPAKLIRQR Sbjct: 185 MSAGELESGNAGEPAKLIRQR 205
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 309 bits (791), Expect = 5e-84 Identities = 160/199 (80%), Positives = 173/199 (86%), Gaps = 4/199 (2%) Frame = +2 Query: 68 FSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNTD--K 235 FSSTVGAPASTPT FLGKK+K YHG + +R VMAA+ +D+ + TD + Sbjct: 5 FSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQTDADR 58 Query: 236 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 415 WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDNTM G Sbjct: 59 WKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDG 118 Query: 416 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 595 YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMS Sbjct: 119 LYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 178 Query: 596 AGELESGNAGEPAKLIRQR 652 AGELESGN GEPAKLIRQR Sbjct: 179 AGELESGN-GEPAKLIRQR 196
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 275 bits (704), Expect = 7e-74 Identities = 140/194 (72%), Positives = 158/194 (81%) Frame = +2 Query: 71 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 250 S V APAST FLGKK V + + + K+N + A D++ + D+W+GLA Sbjct: 23 SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75 Query: 251 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 430 YD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAP Sbjct: 76 YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAP 135 Query: 431 AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 610 AFMDKLVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELE Sbjct: 136 AFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELE 195 Query: 611 SGNAGEPAKLIRQR 652 SGNAGEPAKLIRQR Sbjct: 196 SGNAGEPAKLIRQR 209
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 271 bits (694), Expect = 9e-73 Identities = 137/204 (67%), Positives = 160/204 (78%), Gaps = 11/204 (5%) Frame = +2 Query: 74 STVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE-NIDEK 220 STVGA P + G + + + + G S K + F ++A E + D++ Sbjct: 6 STVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQ 65 Query: 221 RNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 400 + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGLR+Y+ D Sbjct: 66 TDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLD 125 Query: 401 NTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIN 580 N M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIN Sbjct: 126 NNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIN 185 Query: 581 PIMMSAGELESGNAGEPAKLIRQR 652 PIMMSAGELESGNAGEPAKLIRQR Sbjct: 186 PIMMSAGELESGNAGEPAKLIRQR 209
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 271 bits (694), Expect = 9e-73 Identities = 137/204 (67%), Positives = 160/204 (78%), Gaps = 11/204 (5%) Frame = +2 Query: 74 STVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE-NIDEK 220 STVGA P + G + + + + G S K + F ++A E + D++ Sbjct: 6 STVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQ 65 Query: 221 RNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 400 + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGLR+Y+ D Sbjct: 66 TDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLD 125 Query: 401 NTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIN 580 N M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIN Sbjct: 126 NNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIN 185 Query: 581 PIMMSAGELESGNAGEPAKLIRQR 652 PIMMSAGELESGNAGEPAKLIRQR Sbjct: 186 PIMMSAGELESGNAGEPAKLIRQR 209
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 271 bits (693), Expect = 1e-72 Identities = 138/196 (70%), Positives = 159/196 (81%), Gaps = 2/196 (1%) Frame = +2 Query: 71 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 244 SS+ P+ST FLG LKK VN +SK + ++ ++DE + TDK WKG Sbjct: 22 SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73 Query: 245 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 424 LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YI Sbjct: 74 LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYI 133 Query: 425 APAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 604 APAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGE Sbjct: 134 APAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGE 193 Query: 605 LESGNAGEPAKLIRQR 652 LESGNAGEPAKLIRQR Sbjct: 194 LESGNAGEPAKLIRQR 209
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 268 bits (686), Expect = 8e-72 Identities = 141/209 (67%), Positives = 158/209 (75%), Gaps = 16/209 (7%) Frame = +2 Query: 74 STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 211 ST+GA TP T F GK LKK V+ ++K+ R V ++ Sbjct: 6 STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64 Query: 212 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 385 D K+ TD +WKGL D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR Sbjct: 65 DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124 Query: 386 KYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFA 565 +Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184 Query: 566 KMGINPIMMSAGELESGNAGEPAKLIRQR 652 KMGINPIMMSAGELESGNAGEPAKLIRQR Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIRQR 213
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 266 bits (681), Expect = 3e-71 Identities = 135/193 (69%), Positives = 160/193 (82%), Gaps = 3/193 (1%) Frame = +2 Query: 83 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 253 G AS P++ F G LKK ++S V + K + + V A + I+E + T D+W+GLAY Sbjct: 22 GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80 Query: 254 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 433 D+SDDQQDITRGKG+VDSLFQAP GTH AV+SS++Y+S GLR+Y+FDN GFYIAPA Sbjct: 81 DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140 Query: 434 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 613 F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 141 FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 200 Query: 614 GNAGEPAKLIRQR 652 GNAGEPAKLIRQR Sbjct: 201 GNAGEPAKLIRQR 213
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 265 bits (678), Expect = 7e-71 Identities = 136/198 (68%), Positives = 155/198 (78%), Gaps = 4/198 (2%) Frame = +2 Query: 71 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--DKW 238 +++V + T F GK LKK V+ NR +AAE + D K+ T D+W Sbjct: 19 NNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSDRW 75 Query: 239 KGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGF 418 KGL D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ GF Sbjct: 76 KGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGF 135 Query: 419 YIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 598 YIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSA Sbjct: 136 YIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSA 195 Query: 599 GELESGNAGEPAKLIRQR 652 GELESGNAGEPAKLIRQR Sbjct: 196 GELESGNAGEPAKLIRQR 213
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 264 bits (675), Expect = 2e-70 Identities = 140/193 (72%), Positives = 156/193 (80%), Gaps = 3/193 (1%) Frame = +2 Query: 83 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 253 GA AS PT+ F G LKK V S V + K + + V A + I+E + T D+WKGLAY Sbjct: 22 GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80 Query: 254 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 433 DISDDQQDITRGKG+VD LFQAP GTH AV+SSYEY+S GLR+ DN GFYIAPA Sbjct: 81 DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPA 138 Query: 434 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 613 F+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 139 FLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 198 Query: 614 GNAGEPAKLIRQR 652 GNAGEPAKLIRQR Sbjct: 199 GNAGEPAKLIRQR 211
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 263 bits (673), Expect = 3e-70 Identities = 137/190 (72%), Positives = 150/190 (78%), Gaps = 1/190 (0%) Frame = +2 Query: 86 APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 262 A AS PT+ FLG LKK SS+ TV AAEN E++NTDKW LA D S Sbjct: 23 AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77 Query: 263 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 442 DDQ DI RGKG+VDSLFQAP GTH + SS+EY SQGLRKYD DN +G FYIAPAFMD Sbjct: 78 DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137 Query: 443 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 622 KLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNA Sbjct: 138 KLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNA 197 Query: 623 GEPAKLIRQR 652 GEPAKLIRQR Sbjct: 198 GEPAKLIRQR 207
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 261 bits (668), Expect = 1e-69 Identities = 134/207 (64%), Positives = 155/207 (74%), Gaps = 14/207 (6%) Frame = +2 Query: 74 STVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMAAENI 211 ST+GA T N FLG +LK V+ +SK F ++A ++ Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVAEQDE 59 Query: 212 DEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKY 391 +++ DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S GLR Y Sbjct: 60 EKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDY 119 Query: 392 DFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 571 +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSFQCELVFAKM Sbjct: 120 SYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKM 179 Query: 572 GINPIMMSAGELESGNAGEPAKLIRQR 652 GINPIMMSAGELESGNAGEPAKLIRQR Sbjct: 180 GINPIMMSAGELESGNAGEPAKLIRQR 206
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 261 bits (667), Expect = 1e-69 Identities = 133/207 (64%), Positives = 154/207 (74%), Gaps = 14/207 (6%) Frame = +2 Query: 74 STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 211 ST+GA + P T F GK LKK V+ +NR + A+ + Sbjct: 6 STIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVVAQEV 62 Query: 212 DEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKY 391 DE + D+WKGL + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ L+ Y Sbjct: 63 DETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTY 121 Query: 392 DFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 571 DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELVF KM Sbjct: 122 QLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKM 181 Query: 572 GINPIMMSAGELESGNAGEPAKLIRQR 652 GINPIMMSAGELESGNAGEPAKLIRQR Sbjct: 182 GINPIMMSAGELESGNAGEPAKLIRQR 208
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 187 bits (476), Expect = 2e-47 Identities = 93/148 (62%), Positives = 114/148 (77%), Gaps = 3/148 (2%) Frame = +2 Query: 218 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 388 ++ +W+ + D SDDQQDITRG+ +VD LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 389 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 568 F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K Sbjct: 95 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154 Query: 569 MGINPIMMSAGELESGNAGEPAKLIRQR 652 +GI PI+MSAGELESGNAGEPAKLIR R Sbjct: 155 LGIAPIVMSAGELESGNAGEPAKLIRTR 182
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 111 bits (277), Expect = 2e-24 Identities = 49/79 (62%), Positives = 65/79 (82%) Frame = +2 Query: 416 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 595 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+ ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62 Query: 596 AGELESGNAGEPAKLIRQR 652 GELES +AG+PA+LIR R Sbjct: 63 GGELESPDAGDPARLIRLR 81
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 110 bits (276), Expect = 3e-24 Identities = 49/79 (62%), Positives = 65/79 (82%) Frame = +2 Query: 416 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 595 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62 Query: 596 AGELESGNAGEPAKLIRQR 652 GELES +AG+PA+LIR R Sbjct: 63 GGELESPDAGDPARLIRLR 81
>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 198 Score = 32.7 bits (73), Expect = 0.97 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +2 Query: 503 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIR 646 I+ I GG G GK QCE + K G +S GEL E + E +KLIR Sbjct: 13 IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIR 61
>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 548 Score = 32.0 bits (71), Expect = 1.7 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 365 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 544 Y SQ + YD M Y+ M+ H++ T+P +P+I G+ G GQ + Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387 Query: 545 QC 550 QC Sbjct: 388 QC 389
>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 193 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +2 Query: 503 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIR 646 I+ + GG G GK QCE + K G +S GEL E + E +KLIR Sbjct: 9 IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIR 57
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +2 Query: 497 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 607 PL++ + GG G GK QC + K G +SAGEL Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +2 Query: 497 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 607 PL++ + GG G GK QC + K G +SAGEL Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 2.8 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -3 Query: 333 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 187 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>PCRB_SULAC (Q4JAS3) Protein pcrB homolog| Length = 257 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -2 Query: 421 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 245 +EA G E V P+A+ V +DG+V EER + + +G ++V G+++ + Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 31.2 bits (69), Expect = 2.8 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Frame = +2 Query: 86 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 265 +PA+ P+ +G+K++ V+ ++ G K++ + + KR T ++ G + +SD Sbjct: 35 SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89 Query: 266 D--QQDITRGKGIVDSLFQAPTGDG 334 D ++ + R K +D + + T DG Sbjct: 90 DTIRRMVRRRKERIDIIMPSKTKDG 114
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 30.8 bits (68), Expect = 3.7 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +1 Query: 448 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGEWER 621 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985 Query: 622 W 624 W Sbjct: 1986 W 1986
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = +2 Query: 488 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 649 IK P + ++G G GK+ V A +G+N + + + + GE A++IR+ Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIRE 216
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 30.8 bits (68), Expect = 3.7 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +1 Query: 448 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGEWER 621 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984 Query: 622 W 624 W Sbjct: 1985 W 1985
>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple| epidermal growth factor-like domains 3) (Fragment) Length = 2144 Score = 30.8 bits (68), Expect = 3.7 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +1 Query: 448 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGEWER 621 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209 Query: 622 W 624 W Sbjct: 1210 W 1210
>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.4 bits (67), Expect = 4.8 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +2 Query: 278 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 448 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121 Query: 449 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 535 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 251 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = -2 Query: 526 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 347 L T++E + G ++ G + L +E G E + P+A DVL+ AE Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212 Query: 346 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 242 G+ R+ E DAL G ++ GD+ + T Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246
>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 30.0 bits (66), Expect = 6.3 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -2 Query: 493 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 329 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233 Query: 328 ARGRLEERVHDALPSGDVLLVVG 260 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.0 bits (66), Expect = 6.3 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +2 Query: 278 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 448 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121 Query: 449 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 535 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 6.3 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +2 Query: 278 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 448 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 449 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 535 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 6.3 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +2 Query: 278 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 448 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 449 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 535 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 6.3 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +2 Query: 491 KIPLILGIWGGKGQGKSFQCELVFAKMG 574 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 30.0 bits (66), Expect = 6.3 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -3 Query: 576 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 439 M I++ TSS W P PL PPQ+P + ++ R + + T S S Sbjct: 49 MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94
>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1060 Score = 29.6 bits (65), Expect = 8.2 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%) Frame = +2 Query: 152 NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 331 N+H K + + A + D R LAY+++D + D +F A +G Sbjct: 807 NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858 Query: 332 GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 490 G HEA E S+ KYDF+ + G + P + L NF L + Sbjct: 859 GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907
>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC| 2.7.4.3) (ATP-AMP transphosphorylase) Length = 283 Score = 29.6 bits (65), Expect = 8.2 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +2 Query: 497 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 607 PL + I G GK QCEL+ K G+ + +SAG+L Sbjct: 64 PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDL 98
>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 210 Score = 29.6 bits (65), Expect = 8.2 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 467 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 607 N L +P+ I GG G GK QC+ + AK G+ +S+G+L Sbjct: 11 NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,559,650 Number of Sequences: 219361 Number of extensions: 1835861 Number of successful extensions: 6185 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 5967 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6170 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
