ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalg18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472665.1| Oryza sativa (japonica cultivar-group), predic... 172 7e-40
2emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4,... 111 2e-21
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
4gb|AY106821.1| Zea mays PCO092737 mRNA sequence 107 4e-20
5gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete... 46 0.11
6gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 46 0.11
7emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch... 44 0.45
8emb|AL357522.10| Human DNA sequence from clone RP11-685G11 on ch... 44 0.45
9gb|AC161602.4| Mus musculus BAC clone RP23-336I5 from chromosome... 44 0.45
10emb|AM180150.1| Kerivoula papillosa microsatellite DNA, locus Kp... 44 0.45
11gb|AC138620.4| Mus musculus BAC clone RP23-250E1 from 6, complet... 44 0.45
12gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, co... 42 1.8
13gb|AC132392.3| Mus musculus BAC clone RP23-386F15 from chromosom... 42 1.8
14gb|AC109179.7| Mus musculus chromosome 18, clone RP23-382N7, com... 42 1.8
15emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on ch... 42 1.8
16gb|AC016942.13| Homo sapiens 3 BAC RP11-536K4 (Roswell Park Canc... 42 1.8
17emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 42 1.8
18gb|AE010214.1| Pyrococcus furiosus DSM 3638, section 89 of 173 o... 42 1.8
19gb|AC092645.2| Homo sapiens BAC clone RP11-399B17 from 2, comple... 42 1.8
20gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Can... 42 1.8
21gb|AC157689.2| Xenopus tropicalis clone ISB1-171O22, complete se... 42 1.8
22gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete... 42 1.8
23gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
24gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome ... 40 7.1
25gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
26gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, com... 40 7.1
27gb|AC124560.4| Mus musculus BAC clone RP23-166O22 from chromosom... 40 7.1
28gb|AC135254.2| Homo sapiens X BAC RP11-98L4 (Roswell Park Cancer... 40 7.1
29gb|AC125038.4| Mus musculus BAC clone RP23-333P7 from chromosome... 40 7.1
30emb|CR683700.2|CNS0FQHS Tetraodon nigroviridis full-length cDNA 40 7.1
31emb|CR662625.2|CNS0FA93 Tetraodon nigroviridis full-length cDNA 40 7.1
32emb|AL611922.7| Human DNA sequence from clone RP11-633N4 on chro... 40 7.1
33emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chr... 40 7.1
34gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.1
35emb|AL160173.9| Human DNA sequence from clone RP11-6I13 on chrom... 40 7.1
36emb|AL021326.1|HS124C6 Human DNA sequence from clone RP1-124C6 o... 40 7.1
37gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
38emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chr... 40 7.1
39emb|AL732632.4| Zebrafish DNA sequence from clone CH211-140K5 in... 40 7.1
40gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.1
41tpg|BK000817.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M228,... 40 7.1
42gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosom... 40 7.1
43tpg|BK000313.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M33, ... 40 7.1
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
46dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.1
48dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
49dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
50dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
51emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.1
52emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 40 7.1
53gb|AC119809.10| Mus musculus chromosome 1, clone RP24-505E24, co... 40 7.1
54emb|CR626961.6| Zebrafish DNA sequence from clone CH211-160F13 i... 40 7.1
55gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosom... 40 7.1
56gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 7.1
57gb|AC174767.1| Gasterosteus aculeatus chromosome VMRC28-49C03, c... 40 7.1
58gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
59emb|AL662966.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.1
60emb|CR394538.6| Zebrafish DNA sequence from clone DKEY-189I22 in... 40 7.1
61gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosom... 40 7.1
62emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on ch... 40 7.1
63gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, compl... 40 7.1
64gb|AC135252.2| Homo sapiens X BAC RP11-196I10 (Roswell Park Canc... 40 7.1 
>ref|XM_472665.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 654

 Score =  172 bits (87), Expect = 7e-40
 Identities = 219/263 (83%)
 Strand = Plus / Plus

                                                                       
Query: 195 ttgttgcgatacctatttacagaaagataagagcactggaagataaggtggagaagacgg 254
           ||||||| ||||| || |||||||||||||||||| ||||||| |  ||||||||||| |
Sbjct: 344 ttgttgctatacccatctacagaaagataagagcattggaagacaccgtggagaagacag 403

                                                                       
Query: 255 cagaggtggcggtcgaggtaatcgacacggtggccgaagctgccgagaaagtcgccggcg 314
           | ||||| ||  |||||||  ||||||||||||| || ||  | ||||| ||||||||||
Sbjct: 404 cggaggtagcaatcgaggtggtcgacacggtggcggaggcgactgagaaggtcgccggcg 463

                                                                       
Query: 315 aggtggccgaggcgtttcccgaaaatgaagggctcaaggaggcagcatccaggatcaaga 374
           || ||||||| || |||||||  || |||   ||||||||||  || |||| ||| ||||
Sbjct: 464 agctggccgacgcttttcccggcaacgaaaatctcaaggaggttgcctccaagattaaga 523

                                                                       
Query: 375 ccgtcgccgatgcgatcgaggaggacgccgagaaagccgaggcactaatccataaggttg 434
           |||| ||||||| ||| ||||| || ||||||||||||||||| |||||||| |||||||
Sbjct: 524 ccgtagccgatgtgatagaggatgatgccgagaaagccgaggccctaatccagaaggttg 583

                                  
Query: 435 atgagataacgaaaaaggtggat 457
           ||||||||| |||| || |||||
Sbjct: 584 atgagataaagaaagagttggat 606



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 135 gaggaaatctccctgtgcccaacatgccttcatg 168
           ||||||||||||| || |||| ||||||||||||
Sbjct: 221 gaggaaatctcccagtacccagcatgccttcatg 254
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>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14,
             complete sequence
          Length = 175698

 Score =  111 bits (56), Expect = 2e-21
 Identities = 158/192 (82%)
 Strand = Plus / Plus

                                                                         
Query: 242   gtggagaagacggcagaggtggcggtcgaggtaatcgacacggtggccgaagctgccgag 301
             ||||||||||| || ||||| ||  |||||||  ||||||||||||| || ||  | |||
Sbjct: 27264 gtggagaagacagcggaggtagcaatcgaggtggtcgacacggtggcggaggcgactgag 27323

                                                                         
Query: 302   aaagtcgccggcgaggtggccgaggcgtttcccgaaaatgaagggctcaaggaggcagca 361
             || |||||||||||| ||||||| || |||||||  || |||   ||||||||||  || 
Sbjct: 27324 aaggtcgccggcgagctggccgacgcttttcccggcaacgaaaatctcaaggaggttgcc 27383

                                                                         
Query: 362   tccaggatcaagaccgtcgccgatgcgatcgaggaggacgccgagaaagccgaggcacta 421
             |||| ||| |||||||| ||||||| ||| ||||| || ||||||||||||||||| |||
Sbjct: 27384 tccaagattaagaccgtagccgatgtgatagaggatgatgccgagaaagccgaggcccta 27443

                         
Query: 422   atccataaggtt 433
             ||||| ||||||
Sbjct: 27444 atccagaaggtt 27455



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 195   ttgttgcgatacctatttacagaaagataagagcactggaag 236
             ||||||| ||||| || |||||||||||||||||| ||||||
Sbjct: 27115 ttgttgctatacccatctacagaaagataagagcattggaag 27156



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 135   gaggaaatctccctgtgcccaacatgccttcatgg 169
             ||||||||||||| || |||| |||||||||||||
Sbjct: 26951 gaggaaatctcccagtacccagcatgccttcatgg 26985
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 2e-21
 Identities = 158/192 (82%)
 Strand = Plus / Plus

                                                                            
Query: 242      gtggagaagacggcagaggtggcggtcgaggtaatcgacacggtggccgaagctgccgag 301
                ||||||||||| || ||||| ||  |||||||  ||||||||||||| || ||  | |||
Sbjct: 22423509 gtggagaagacagcggaggtagcaatcgaggtggtcgacacggtggcggaggcgactgag 22423568

                                                                            
Query: 302      aaagtcgccggcgaggtggccgaggcgtttcccgaaaatgaagggctcaaggaggcagca 361
                || |||||||||||| ||||||| || |||||||  || |||   ||||||||||  || 
Sbjct: 22423569 aaggtcgccggcgagctggccgacgcttttcccggcaacgaaaatctcaaggaggttgcc 22423628

                                                                            
Query: 362      tccaggatcaagaccgtcgccgatgcgatcgaggaggacgccgagaaagccgaggcacta 421
                |||| ||| |||||||| ||||||| ||| ||||| || ||||||||||||||||| |||
Sbjct: 22423629 tccaagattaagaccgtagccgatgtgatagaggatgatgccgagaaagccgaggcccta 22423688

                            
Query: 422      atccataaggtt 433
                ||||| ||||||
Sbjct: 22423689 atccagaaggtt 22423700



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 195      ttgttgcgatacctatttacagaaagataagagcactggaag 236
                ||||||| ||||| || |||||||||||||||||| ||||||
Sbjct: 22423360 ttgttgctatacccatctacagaaagataagagcattggaag 22423401



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 135      gaggaaatctccctgtgcccaacatgccttcatgg 169
                ||||||||||||| || |||| |||||||||||||
Sbjct: 22423196 gaggaaatctcccagtacccagcatgccttcatgg 22423230



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 490      gaaggagaagggagaaagaggagg 513
                |||||||||| |||||||||||||
Sbjct: 13292820 gaaggagaagtgagaaagaggagg 13292797
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>gb|AY106821.1| Zea mays PCO092737 mRNA sequence
          Length = 933

 Score =  107 bits (54), Expect = 4e-20
 Identities = 201/250 (80%)
 Strand = Plus / Plus

                                                                       
Query: 210 tttacagaaagataagagcactggaagataaggtggagaagacggcagaggtggcggtcg 269
           ||||||||| | | |||||| | |||||||| || ||||||||||| |||| |||| |||
Sbjct: 415 tttacagaaggttcagagcattagaagataacgtagagaagacggcggaggcggcgatcg 474

                                                                       
Query: 270 aggtaatcgacacggtggccgaagctgccgagaaagtcgccggcgaggtggccgaggcgt 329
           |||| |||||| ||||||| || ||  ||||||| ||||||| |||||| ||  | ||||
Sbjct: 475 aggtgatcgactcggtggcggaggcgaccgagaaggtcgccgacgaggttgcgcaagcgt 534

                                                                       
Query: 330 ttcccgaaaatgaagggctcaaggaggcagcatccaggatcaagaccgtcgccgatgcga 389
           | ||||  | ||||   |||||| ||||||| |||| ||| |||||  |||| |||| ||
Sbjct: 535 tccccggcagtgaaactctcaagcaggcagcctccaagattaagacgatcgcggatgaga 594

                                                                       
Query: 390 tcgaggaggacgccgagaaagccgaggcactaatccataaggttgatgagataacgaaaa 449
           ||||||| || ||||| ||||| ||||| || ||  | |||||||| ||||||| |||| 
Sbjct: 595 tcgaggaagatgccgacaaagctgaggccctgattgagaaggttgacgagataaagaaag 654

                     
Query: 450 aggtggattc 459
           ||||||||||
Sbjct: 655 aggtggattc 664
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>gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete sequence
          Length = 214995

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 491   aaggagaagggagaaagaggagg 513
             |||||||||||||||||||||||
Sbjct: 77995 aaggagaagggagaaagaggagg 77973
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>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 491   aaggagaagggagaaagaggagg 513
             |||||||||||||||||||||||
Sbjct: 15604 aaggagaagggagaaagaggagg 15626
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>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 375   ccgtcgccgatgcgatcgagga 396
             ||||||||||||||||||||||
Sbjct: 70023 ccgtcgccgatgcgatcgagga 70044
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>emb|AL357522.10| Human DNA sequence from clone RP11-685G11 on chromosome 6 Contains two
             CpG islands, complete sequence
          Length = 124506

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 80    atcaggacagcaacacaaatcc 101
             ||||||||||||||||||||||
Sbjct: 85026 atcaggacagcaacacaaatcc 85005
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>gb|AC161602.4| Mus musculus BAC clone RP23-336I5 from chromosome 6, complete sequence
          Length = 224158

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 492    aggagaagggagaaagaggagg 513
              ||||||||||||||||||||||
Sbjct: 174750 aggagaagggagaaagaggagg 174729
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>emb|AM180150.1| Kerivoula papillosa microsatellite DNA, locus Kpa33, clone
           KpaN1f09A
          Length = 606

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 488 atgaaggagaagggagaaagaggagg 513
           ||||||||||||||||| ||||||||
Sbjct: 242 atgaaggagaagggagagagaggagg 267
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>gb|AC138620.4| Mus musculus BAC clone RP23-250E1 from 6, complete sequence
          Length = 209846

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 492    aggagaagggagaaagaggagg 513
              ||||||||||||||||||||||
Sbjct: 149792 aggagaagggagaaagaggagg 149813
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>gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, complete sequence
          Length = 192286

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 489    tgaaggagaagggagaaagaggagg 513
              ||||||||||||| |||||||||||
Sbjct: 100352 tgaaggagaagggggaaagaggagg 100328
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>gb|AC132392.3| Mus musculus BAC clone RP23-386F15 from chromosome 7, complete sequence
          Length = 208499

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 494   gagaagggagaaagaggaggg 514
             |||||||||||||||||||||
Sbjct: 85619 gagaagggagaaagaggaggg 85639
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>gb|AC109179.7| Mus musculus chromosome 18, clone RP23-382N7, complete sequence
          Length = 241644

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 489  tgaaggagaagggagaaagaggagg 513
            ||||||||||||| |||||||||||
Sbjct: 6167 tgaaggagaagggggaaagaggagg 6143
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>emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on chromosome X Contains the
              DXYS155E gene for DNA segment on chromosome X and Y
              (unique) 155 expressed sequence (XE7, XE7Y), the ASMT gene
              for acetylserotonin O-methyltransferase (ASMTY, HIOMT,
              HIOMTY), three novel genes and three CpG islands, complete
              sequence
          Length = 189825

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 492    aggagaagggagaaagaggagggag 516
              ||||| |||||||||||||||||||
Sbjct: 152969 aggaggagggagaaagaggagggag 152945
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>gb|AC016942.13| Homo sapiens 3 BAC RP11-536K4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   tgttgcgatacctatttacag 216
             |||||||||||||||||||||
Sbjct: 15977 tgttgcgatacctatttacag 15957
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 306  tcgccggcgaggtggccgaggcgtt 330
            ||||||| |||||||||||||||||
Sbjct: 2014 tcgccggggaggtggccgaggcgtt 1990
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>gb|AE010214.1| Pyrococcus furiosus DSM 3638, section 89 of 173 of the complete genome
          Length = 11615

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 428   aaggttgatgagataacgaaaaagg 452
             |||||||||||||||| ||||||||
Sbjct: 10205 aaggttgatgagataatgaaaaagg 10181
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>gb|AC092645.2| Homo sapiens BAC clone RP11-399B17 from 2, complete sequence
          Length = 147390

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 490   gaaggagaagggagaaagagg 510
             |||||||||||||||||||||
Sbjct: 17046 gaaggagaagggagaaagagg 17066
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>gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163111

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 494   gagaagggagaaagaggaggg 514
             |||||||||||||||||||||
Sbjct: 86864 gagaagggagaaagaggaggg 86884
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>gb|AC157689.2| Xenopus tropicalis clone ISB1-171O22, complete sequence
          Length = 80070

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 491   aaggagaagggagaaagagga 511
             |||||||||||||||||||||
Sbjct: 41583 aaggagaagggagaaagagga 41563
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>gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete sequence
          Length = 152747

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 492    aggagaagggagaaagaggagggag 516
              ||||| |||||||||||||||||||
Sbjct: 118265 aggaggagggagaaagaggagggag 118241
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>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||| |||||||||||||
Sbjct: 90854 gaaggagaagtgagaaagaggagg 90831



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||| |||||||||||||
Sbjct: 54369 gaaggagaagtgagaaagaggagg 54346
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>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence
          Length = 240812

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   ggagaagggagaaagaggagggag 516
             ||||||||||||| ||||||||||
Sbjct: 38872 ggagaagggagaaggaggagggag 38895
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>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0030I07, complete sequence
          Length = 122733

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||| |||||||||||||
Sbjct: 50185 gaaggagaagtgagaaagaggagg 50162
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>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence
          Length = 253343

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   ggaagataaggtggagaaga 251
             ||||||||||||||||||||
Sbjct: 83080 ggaagataaggtggagaaga 83061
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>gb|AC124560.4| Mus musculus BAC clone RP23-166O22 from chromosome 5, complete sequence
          Length = 222593

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   agaagggagaaagaggaggg 514
             ||||||||||||||||||||
Sbjct: 16496 agaagggagaaagaggaggg 16515
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>gb|AC135254.2| Homo sapiens X BAC RP11-98L4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 62121

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||||||||| |||||||
Sbjct: 35544 gaaggagaagggagaaggaggagg 35567
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>gb|AC125038.4| Mus musculus BAC clone RP23-333P7 from chromosome 5, complete sequence
          Length = 198463

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 495    agaagggagaaagaggaggg 514
              ||||||||||||||||||||
Sbjct: 119601 agaagggagaaagaggaggg 119582
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>emb|CR683700.2|CNS0FQHS Tetraodon nigroviridis full-length cDNA
          Length = 858

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 gaggaggacgccgagaaagc 411
           ||||||||||||||||||||
Sbjct: 371 gaggaggacgccgagaaagc 390
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>emb|CR662625.2|CNS0FA93 Tetraodon nigroviridis full-length cDNA
          Length = 598

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 gaggaggacgccgagaaagc 411
           ||||||||||||||||||||
Sbjct: 111 gaggaggacgccgagaaagc 130
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>emb|AL611922.7| Human DNA sequence from clone RP11-633N4 on chromosome 9, complete
              sequence
          Length = 176612

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 490    gaaggagaagggagaaagaggagg 513
              ||||||||||| ||||||||||||
Sbjct: 167301 gaaggagaaggaagaaagaggagg 167278
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>emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chromosome 6 Contains the
             5' part of a novel protein similar to ribosomal protein
             L14 (L14p/L23e), a novel gene, the CAPN11 gene for calpain
             11 and one CpG island, complete sequence
          Length = 89351

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 490   gaaggagaagggagaaagag 509
             ||||||||||||||||||||
Sbjct: 52929 gaaggagaagggagaaagag 52910
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 289     cgaagctgccgagaaagtcgccggcgag 316
               |||||| |||||||||||||||| ||||
Sbjct: 1717781 cgaagccgccgagaaagtcgccgccgag 1717808
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>emb|AL160173.9| Human DNA sequence from clone RP11-6I13 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 33407

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   ggagaagggagaaagaggagggag 516
             ||||||| ||||||||||||||||
Sbjct: 12029 ggagaagagagaaagaggagggag 12052
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>emb|AL021326.1|HS124C6 Human DNA sequence from clone RP1-124C6 on chromosome 6q21 Contains a
             putative novel gene, complete sequence
          Length = 103567

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   aaggagaagggagaaagagg 510
             ||||||||||||||||||||
Sbjct: 78974 aaggagaagggagaaagagg 78955
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>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0023F01, complete sequence
          Length = 145009

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 490  gaaggagaagggagaaagaggagg 513
            |||||||||| |||||||||||||
Sbjct: 1793 gaaggagaagtgagaaagaggagg 1816
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>emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 191715

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   agaagggagaaagaggaggg 514
             ||||||||||||||||||||
Sbjct: 78679 agaagggagaaagaggaggg 78698
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>emb|AL732632.4| Zebrafish DNA sequence from clone CH211-140K5 in linkage group 14
            Contains two novel retroelements, the 5' part of a novel
            gene similar to GRIN3A (ionotropic glutamate receptor,
            N-methyl-D-aspartate 3A (GRIN3A) and four CpG islands,
            complete sequence
          Length = 159482

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 490  gaaggagaagggagaaagaggagg 513
            |||||||||| |||||||||||||
Sbjct: 7069 gaaggagaagagagaaagaggagg 7046
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 305     gtcgccggcgaggtggccgaggcg 328
               |||||||||||| |||||||||||
Sbjct: 4036798 gtcgccggcgagttggccgaggcg 4036821
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>tpg|BK000817.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M228, complete sequence
          Length = 1295

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 490 gaaggagaagggagaaagaggagg 513
           |||||||||| |||||||||||||
Sbjct: 391 gaaggagaagtgagaaagaggagg 368
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>gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosome 13, complete sequence
          Length = 193594

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    gaaggagaagggagaaagag 509
              ||||||||||||||||||||
Sbjct: 135485 gaaggagaagggagaaagag 135466
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>tpg|BK000313.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M33, complete sequence
          Length = 1233

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 490 gaaggagaagggagaaagaggagg 513
           |||||||||| |||||||||||||
Sbjct: 394 gaaggagaagtgagaaagaggagg 371
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 490      gaaggagaagggagaaagaggagg 513
                |||||||||| |||||||||||||
Sbjct: 26587927 gaaggagaagtgagaaagaggagg 26587904



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 490      gaaggagaagggagaaagaggagg 513
                |||||||||| |||||||||||||
Sbjct: 13853295 gaaggagaagtgagaaagaggagg 13853272



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 490      gaaggagaagggagaaagaggagg 513
                |||||||||| |||||||||||||
Sbjct: 13816810 gaaggagaagtgagaaagaggagg 13816787
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 307      cgccggcgaggtggccgagg 326
                ||||||||||||||||||||
Sbjct: 20998552 cgccggcgaggtggccgagg 20998533
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 490     gaaggagaagggagaaagaggagg 513
               |||||||||| |||||||||||||
Sbjct: 7619528 gaaggagaagtgagaaagaggagg 7619505
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 305     gtcgccggcgaggtggccgaggcg 328
               ||||||||||||||||||| ||||
Sbjct: 1834701 gtcgccggcgaggtggccgtggcg 1834724
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>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0086P08
          Length = 145312

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||| |||||||||||||
Sbjct: 30104 gaaggagaagtgagaaagaggagg 30081
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0708G02
          Length = 168976

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 490    gaaggagaagggagaaagaggagg 513
              |||||||||| |||||||||||||
Sbjct: 168320 gaaggagaagtgagaaagaggagg 168297
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>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_A12
          Length = 152269

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   cgccggcgaggtggccgagg 326
             ||||||||||||||||||||
Sbjct: 41851 cgccggcgaggtggccgagg 41832
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    tggtcgttggtgccgtgctt 196
              ||||||||||||||||||||
Sbjct: 274175 tggtcgttggtgccgtgctt 274156
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 440    ataacgaaaaaggtggattc 459
              ||||||||||||||||||||
Sbjct: 236965 ataacgaaaaaggtggattc 236946
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>gb|AC119809.10| Mus musculus chromosome 1, clone RP24-505E24, complete sequence
          Length = 154931

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   agaagggagaaagaggaggg 514
             ||||||||||||||||||||
Sbjct: 65323 agaagggagaaagaggaggg 65304
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>emb|CR626961.6| Zebrafish DNA sequence from clone CH211-160F13 in linkage group 10,
             complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||| |||||||||||||
Sbjct: 62820 gaaggagaagagagaaagaggagg 62797
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>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence
          Length = 228892

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    gagaagggagaaagaggagg 513
              ||||||||||||||||||||
Sbjct: 172137 gagaagggagaaagaggagg 172118
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     ccggcgaggtggccgaggcg 328
               ||||||||||||||||||||
Sbjct: 3249138 ccggcgaggtggccgaggcg 3249119
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>gb|AC174767.1| Gasterosteus aculeatus chromosome VMRC28-49C03, complete sequence
          Length = 136807

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   gaaatctccctgtgcccaac 157
             ||||||||||||||||||||
Sbjct: 46254 gaaatctccctgtgcccaac 46235
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 490      gaaggagaagggagaaagaggagg 513
                |||||||||| |||||||||||||
Sbjct: 26913191 gaaggagaagtgagaaagaggagg 26913168



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 490      gaaggagaagggagaaagaggagg 513
                |||||||||| |||||||||||||
Sbjct: 13935297 gaaggagaagtgagaaagaggagg 13935274



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 490      gaaggagaagggagaaagaggagg 513
                |||||||||| |||||||||||||
Sbjct: 13898812 gaaggagaagtgagaaagaggagg 13898789
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>emb|AL662966.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035B13,
             complete sequence
          Length = 145234

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||| |||||||||||||
Sbjct: 64919 gaaggagaagtgagaaagaggagg 64896
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>emb|CR394538.6| Zebrafish DNA sequence from clone DKEY-189I22 in linkage group 10,
             complete sequence
          Length = 155394

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||| |||||||||||||
Sbjct: 70180 gaaggagaagagagaaagaggagg 70203
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>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence
          Length = 212016

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    gagaagggagaaagaggagg 513
              ||||||||||||||||||||
Sbjct: 139099 gagaagggagaaagaggagg 139118
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>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete
             sequence
          Length = 187541

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   gagaagggagaaagaggagg 513
             ||||||||||||||||||||
Sbjct: 54001 gagaagggagaaagaggagg 54020
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>gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, complete sequence
          Length = 187685

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 490    gaaggagaagggagaaagaggagg 513
              |||||||||||||||| |||||||
Sbjct: 128985 gaaggagaagggagaaggaggagg 128962
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>gb|AC135252.2| Homo sapiens X BAC RP11-196I10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 62101

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   gaaggagaagggagaaagaggagg 513
             |||||||||||||||| |||||||
Sbjct: 26582 gaaggagaagggagaaggaggagg 26559


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,021,626
Number of Sequences: 3902068
Number of extensions: 4021626
Number of successful extensions: 88496
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87650
Number of HSP's gapped (non-prelim): 843
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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