Clone Name | baalh19 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Plus Query: 87 caatggtggtggccccagtctcagcagtgtgagcagtctatggtccagttccaggagtgt 146 |||||||||||||| || ||||||||| |||||| ||||||||||||| || ||||| Sbjct: 438 caatggtggtggcctcaatctcagcagcagcagcagtgtatggtccagttcgagaagtgt 497 Query: 147 gagtgatgccgaggatgatgacacaggcagcggccctgaggaggaaaacggggtgctgga 206 ||| || |||||||||||||| || | | |||||||| ||||| || ||||| |||| Sbjct: 498 gagcgaggccgaggatgatgatactg---gtggccctgaagaggagaatggggtcttgga 554 Query: 207 tgattgggaagctgttgctgatgca 231 ||| ||||||||||||||||||||| Sbjct: 555 tgactgggaagctgttgctgatgca 579 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 360 agcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaagcaggc 419 ||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| ||||| Sbjct: 708 agcttgggcgcctgatgatatattccgtccacagagcttacccagcatctccaggcaggt 767 Query: 420 aagcttccc 428 |||||||| Sbjct: 768 cagcttccc 776 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 505 ccaatatgctatgaggatcttgacccaacagactcaagcttc 546 |||||||||| ||||||||||||| ||||||||||||||| Sbjct: 844 ccaatatgctgcgaggatcttgacctgacagactcaagcttc 885
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 87 caatggtggtggccccagtctcagcagtgtgagcagtctatggtccagttccaggagtgt 146 |||||||||||||| || ||||||||| |||||| ||||||||||||| || ||||| Sbjct: 121767 caatggtggtggcctcaatctcagcagcagcagcagtgtatggtccagttcgagaagtgt 121708 Query: 147 gagtgatgccgaggatgatgacacaggcagcggccctgaggaggaaaacggggtgctgga 206 ||| || |||||||||||||| || | | |||||||| ||||| || ||||| |||| Sbjct: 121707 gagcgaggccgaggatgatgatactg---gtggccctgaagaggagaatggggtcttgga 121651 Query: 207 tgattgggaagctgttgctgatgca 231 ||| ||||||||||||||||||||| Sbjct: 121650 tgactgggaagctgttgctgatgca 121626 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 360 agcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaagcaggc 419 ||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| ||||| Sbjct: 121497 agcttgggcgcctgatgatatattccgtccacagagcttacccagcatctccaggcaggt 121438 Query: 420 aagcttccc 428 |||||||| Sbjct: 121437 cagcttccc 121429 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 505 ccaatatgctatgaggatcttgacccaacagactcaagcttc 546 |||||||||| ||||||||||||| ||||||||||||||| Sbjct: 121361 ccaatatgctgcgaggatcttgacctgacagactcaagcttc 121320
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 87 caatggtggtggccccagtctcagcagtgtgagcagtctatggtccagttccaggagtgt 146 |||||||||||||| || ||||||||| |||||| ||||||||||||| || ||||| Sbjct: 15619 caatggtggtggcctcaatctcagcagcagcagcagtgtatggtccagttcgagaagtgt 15560 Query: 147 gagtgatgccgaggatgatgacacaggcagcggccctgaggaggaaaacggggtgctgga 206 ||| || |||||||||||||| || | | |||||||| ||||| || ||||| |||| Sbjct: 15559 gagcgaggccgaggatgatgatactg---gtggccctgaagaggagaatggggtcttgga 15503 Query: 207 tgattgggaagctgttgctgatgca 231 ||| ||||||||||||||||||||| Sbjct: 15502 tgactgggaagctgttgctgatgca 15478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 360 agcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaagcaggc 419 ||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| ||||| Sbjct: 15349 agcttgggcgcctgatgatatattccgtccacagagcttacccagcatctccaggcaggt 15290 Query: 420 aagcttccc 428 |||||||| Sbjct: 15289 cagcttccc 15281 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 505 ccaatatgctatgaggatcttgacccaacagactcaagcttc 546 |||||||||| ||||||||||||| ||||||||||||||| Sbjct: 15213 ccaatatgctgcgaggatcttgacctgacagactcaagcttc 15172
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 87 caatggtggtggccccagtctcagcagtgtgagcagtctatggtccagttccaggagtgt 146 |||||||||||||| || ||||||||| |||||| ||||||||||||| || ||||| Sbjct: 23125427 caatggtggtggcctcaatctcagcagcagcagcagtgtatggtccagttcgagaagtgt 23125368 Query: 147 gagtgatgccgaggatgatgacacaggcagcggccctgaggaggaaaacggggtgctgga 206 ||| || |||||||||||||| || | | |||||||| ||||| || ||||| |||| Sbjct: 23125367 gagcgaggccgaggatgatgatactg---gtggccctgaagaggagaatggggtcttgga 23125311 Query: 207 tgattgggaagctgttgctgatgca 231 ||| ||||||||||||||||||||| Sbjct: 23125310 tgactgggaagctgttgctgatgca 23125286 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 360 agcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaagcaggc 419 ||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| ||||| Sbjct: 23125157 agcttgggcgcctgatgatatattccgtccacagagcttacccagcatctccaggcaggt 23125098 Query: 420 aagcttccc 428 |||||||| Sbjct: 23125097 cagcttccc 23125089 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 505 ccaatatgctatgaggatcttgacccaacagactcaagcttc 546 |||||||||| ||||||||||||| ||||||||||||||| Sbjct: 23125021 ccaatatgctgcgaggatcttgacctgacagactcaagcttc 23124980 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ccagcaatggtggtggcccc 102 |||||||||||||||||||| Sbjct: 16370359 ccagcaatggtggtggcccc 16370340
>dbj|AK102269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088P15, full insert sequence Length = 1478 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Plus Query: 87 caatggtggtggccccagtctcagcagtgtgagcagtctatggtccagttccaggagtgt 146 |||||||||||||| || ||||||||| |||||| ||||||||||||| || ||||| Sbjct: 578 caatggtggtggcctcaatctcagcagcagcagcagtgtatggtccagttcgagaagtgt 637 Query: 147 gagtgatgccgaggatgatgacacaggcagcggccctgaggaggaaaacggggtgctgga 206 ||| || |||||||||||||| || | | |||||||| ||||| || ||||| |||| Sbjct: 638 gagcgaggccgaggatgatgatactg---gtggccctgaagaggagaatggggtcttgga 694 Query: 207 tgattgggaagctgttgctgatgca 231 ||| ||||||||||||||||||||| Sbjct: 695 tgactgggaagctgttgctgatgca 719 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 360 agcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaagcaggc 419 ||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| ||||| Sbjct: 848 agcttgggcgcctgatgatatattccgtccacagagcttacccagcatctccaggcaggt 907 Query: 420 aagcttccc 428 |||||||| Sbjct: 908 cagcttccc 916 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 505 ccaatatgctatgaggatcttgacccaacagactcaagcttc 546 |||||||||| ||||||||||||| ||||||||||||||| Sbjct: 984 ccaatatgctgcgaggatcttgacctgacagactcaagcttc 1025
>dbj|AK068918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169C17, full insert sequence Length = 2262 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Plus Query: 87 caatggtggtggccccagtctcagcagtgtgagcagtctatggtccagttccaggagtgt 146 |||||||||||||| || ||||||||| |||||| ||||||||||||| || ||||| Sbjct: 578 caatggtggtggcctcaatctcagcagcagcagcagtgtatggtccagttcgagaagtgt 637 Query: 147 gagtgatgccgaggatgatgacacaggcagcggccctgaggaggaaaacggggtgctgga 206 ||| || |||||||||||||| || | | |||||||| ||||| || ||||| |||| Sbjct: 638 gagcgaggccgaggatgatgatactg---gtggccctgaagaggagaatggggtcttgga 694 Query: 207 tgattgggaagctgttgctgatgca 231 ||| ||||||||||||||||||||| Sbjct: 695 tgactgggaagctgttgctgatgca 719 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 360 agcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaagcaggc 419 ||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| ||||| Sbjct: 848 agcttgggcgcctgatgatatattccgtccacagagcttacccagcatctccaggcaggt 907 Query: 420 aagcttccc 428 |||||||| Sbjct: 908 cagcttccc 916 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 505 ccaatatgctatgaggatcttgacccaacagactcaagcttc 546 |||||||||| ||||||||||||| ||||||||||||||| Sbjct: 984 ccaatatgctgcgaggatcttgacctgacagactcaagcttc 1025
>dbj|AK064338.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G12, full insert sequence Length = 1477 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Plus Query: 87 caatggtggtggccccagtctcagcagtgtgagcagtctatggtccagttccaggagtgt 146 |||||||||||||| || ||||||||| |||||| ||||||||||||| || ||||| Sbjct: 577 caatggtggtggcctcaatctcagcagcagcagcagtgtatggtccagttcgagaagtgt 636 Query: 147 gagtgatgccgaggatgatgacacaggcagcggccctgaggaggaaaacggggtgctgga 206 ||| || |||||||||||||| || | | |||||||| ||||| || ||||| |||| Sbjct: 637 gagcgaggccgaggatgatgatactg---gtggccctgaagaggagaatggggtcttgga 693 Query: 207 tgattgggaagctgttgctgatgca 231 ||| ||||||||||||||||||||| Sbjct: 694 tgactgggaagctgttgctgatgca 718 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 360 agcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaagcaggc 419 ||||||||| || ||||||| ||||||||||||||||| ||||| ||||||| ||||| Sbjct: 847 agcttgggcgcctgatgatatattccgtccacagagcttacccagcatctccaggcaggt 906 Query: 420 aagcttccc 428 |||||||| Sbjct: 907 cagcttccc 915 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 505 ccaatatgctatgaggatcttgacccaacagactcaagcttc 546 |||||||||| ||||||||||||| ||||||||||||||| Sbjct: 983 ccaatatgctgcgaggatcttgacctgacagactcaagcttc 1024
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 502 tgcccaatatgctatgaggatcttgacccaacagactcaagcttcctcccctgcccttgc 561 ||||| |||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 22385214 tgccctatatgctacgaggaccttgatccaacagattcaagcttcctcccttgcccctgc 22385155 Query: 562 gggtttcatctgtgcctcttctgcc 586 || ||||||||||| || ||||||| Sbjct: 22385154 ggttttcatctgtgtctgttctgcc 22385130 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 203 tggatgattgggaagctgttgctgatgcactttcagtcgatga 245 |||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 22385513 tggatgattgggaagctgttgccgatgcactctcagtggatga 22385471 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Minus Query: 356 caagagcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaa 413 ||||||||||| ||||||||| | |||||||||||||| || ||||| ||||||| Sbjct: 22385363 caagagcttggagcccagatgatgcattccgtccacagagtttacccagcctctccaa 22385306
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 502 tgcccaatatgctatgaggatcttgacccaacagactcaagcttcctcccctgcccttgc 561 ||||| |||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 143858 tgccctatatgctacgaggaccttgatccaacagattcaagcttcctcccttgcccctgc 143799 Query: 562 gggtttcatctgtgcctcttctgcc 586 || ||||||||||| || ||||||| Sbjct: 143798 ggttttcatctgtgtctgttctgcc 143774 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 203 tggatgattgggaagctgttgctgatgcactttcagtcgatga 245 |||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 144157 tggatgattgggaagctgttgccgatgcactctcagtggatga 144115 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Minus Query: 356 caagagcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaa 413 ||||||||||| ||||||||| | |||||||||||||| || ||||| ||||||| Sbjct: 144007 caagagcttggagcccagatgatgcattccgtccacagagtttacccagcctctccaa 143950
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 502 tgcccaatatgctatgaggatcttgacccaacagactcaagcttcctcccctgcccttgc 561 ||||| |||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 41433 tgccctatatgctacgaggaccttgatccaacagattcaagcttcctcccttgcccctgc 41374 Query: 562 gggtttcatctgtgcctcttctgcc 586 || ||||||||||| || ||||||| Sbjct: 41373 ggttttcatctgtgtctgttctgcc 41349 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 203 tggatgattgggaagctgttgctgatgcactttcagtcgatga 245 |||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 41732 tggatgattgggaagctgttgccgatgcactctcagtggatga 41690 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Minus Query: 356 caagagcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaa 413 ||||||||||| ||||||||| | |||||||||||||| || ||||| ||||||| Sbjct: 41582 caagagcttggagcccagatgatgcattccgtccacagagtttacccagcctctccaa 41525
>dbj|AK119275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-B07, full insert sequence Length = 3265 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 502 tgcccaatatgctatgaggatcttgacccaacagactcaagcttcctcccctgcccttgc 561 ||||| |||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 1092 tgccctatatgctacgaggaccttgatccaacagattcaagcttcctcccttgcccctgc 1151 Query: 562 gggtttcatctgtgcctcttctgcc 586 || ||||||||||| || ||||||| Sbjct: 1152 ggttttcatctgtgtctgttctgcc 1176 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgcactttcagtcgatga 245 |||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 793 tggatgattgggaagctgttgccgatgcactctcagtggatga 835 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Plus Query: 356 caagagcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaa 413 ||||||||||| ||||||||| | |||||||||||||| || ||||| ||||||| Sbjct: 943 caagagcttggagcccagatgatgcattccgtccacagagtttacccagcctctccaa 1000
>dbj|AK068477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153F14, full insert sequence Length = 1481 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 502 tgcccaatatgctatgaggatcttgacccaacagactcaagcttcctcccctgcccttgc 561 ||||| |||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 986 tgccctatatgctacgaggaccttgatccaacagattcaagcttcctcccttgcccctgc 1045 Query: 562 gggtttcatctgtgcctcttctgcc 586 || ||||||||||| || ||||||| Sbjct: 1046 ggttttcatctgtgtctgttctgcc 1070 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgcactttcagtcgatga 245 |||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 687 tggatgattgggaagctgttgccgatgcactctcagtggatga 729 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Plus Query: 356 caagagcttgggcaccagatgatacgttccgtccacagagcttgcccagtatctccaa 413 ||||||||||| ||||||||| | |||||||||||||| || ||||| ||||||| Sbjct: 837 caagagcttggagcccagatgatgcattccgtccacagagtttacccagcctctccaa 894
>ref|NM_125685.3| Arabidopsis thaliana unknown protein AT5G62910 mRNA, complete cds Length = 1269 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 |||||||||||||||||||||||||||| Sbjct: 521 tggatgattgggaagctgttgctgatgc 548
>gb|AC160095.1| Lycopersicon esculentum chromosome 0 clone BB-BA4 map MAP_LOC, complete sequence Length = 121127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 203 tggatgattgggaagctgttgctgatgc 230 |||||||||||||||||||||||||||| Sbjct: 64421 tggatgattgggaagctgttgctgatgc 64394
>gb|AY080603.1| Arabidopsis thaliana unknown protein (At5g62910) mRNA, partial cds Length = 759 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 |||||||||||||||||||||||||||| Sbjct: 112 tggatgattgggaagctgttgctgatgc 139
>gb|BT024718.1| Arabidopsis thaliana At5g62910 mRNA, complete cds Length = 984 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 |||||||||||||||||||||||||||| Sbjct: 425 tggatgattgggaagctgttgctgatgc 452
>emb|BX831076.1|CNS09ZF6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZF08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1266 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 |||||||||||||||||||||||||||| Sbjct: 521 tggatgattgggaagctgttgctgatgc 548
>gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putative transposase, putative BAH domain-containing protein, putative permease I, putative pollen specific LIM domain-containing protein, putative betaine aldehyde dehyrogenase, EDS1, and putative ribosomal-protein S6 kinase-like protein genes, complete cds Length = 121127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 203 tggatgattgggaagctgttgctgatgc 230 |||||||||||||||||||||||||||| Sbjct: 64421 tggatgattgggaagctgttgctgatgc 64394
>dbj|AB009053.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2 Length = 78145 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 |||||||||||||||||||||||||||| Sbjct: 66092 tggatgattgggaagctgttgctgatgc 66119
>ref|NM_114676.2| Arabidopsis thaliana unknown protein AT3G48070 transcript variant AT3G48070.1 mRNA, complete cds Length = 1559 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 592 tggatgattgggaagctattgctgatgc 619
>ref|NM_001035751.1| Arabidopsis thaliana unknown protein AT3G48070 transcript variant AT3G48070.2 mRNA, complete cds Length = 1307 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 597 tggatgattgggaagctattgctgatgc 624
>emb|AL049658.1|ATT17F15 Arabidopsis thaliana DNA chromosome 3, BAC clone T17F15 Length = 107950 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 23025 tggatgattgggaagctattgctgatgc 22998
>dbj|AK221778.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-72-G19 Length = 1410 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 598 tggatgattgggaagctattgctgatgc 625
>gb|DQ059132.1| Arabidopsis thaliana RING finger family protein (At3g48070) mRNA, complete cds Length = 960 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 431 tggatgattgggaagctattgctgatgc 458
>emb|BX822505.1|CNS0A5X2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1383 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 588 tggatgattgggaagctattgctgatgc 615
>emb|BX826270.1|CNS0A581 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL95ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1156 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 576 tggatgattgggaagctattgctgatgc 603
>gb|AY084934.1| Arabidopsis thaliana clone 122162 mRNA, complete sequence Length = 1466 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||||||| |||||||||| Sbjct: 593 tggatgattgggaagctattgctgatgc 620
>gb|DQ354158.1| Vitis pseudoreticulata clone EST-266 unknown mRNA Length = 777 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 tggatgattgggaagctgttgctgatgc 230 ||||||||||||| |||||||||||||| Sbjct: 461 tggatgattgggaggctgttgctgatgc 488
>gb|DQ006809.1| Medicago truncatula tyrosine aminotransferase mRNA, complete cds Length = 1979 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 gaagctgttgctgatgcacttt 235 |||||||||||||||||||||| Sbjct: 730 gaagctgttgctgatgcacttt 751
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 atgattgggaagctgttgctgatgc 230 ||||| ||||||||||||||||||| Sbjct: 22028896 atgatggggaagctgttgctgatgc 22028920
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 atgattgggaagctgttgctgatgc 230 ||||| ||||||||||||||||||| Sbjct: 66769 atgatggggaagctgttgctgatgc 66793
>dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R1105h09, complete sequence Length = 219574 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 attgggaagctgttgctgatg 229 ||||||||||||||||||||| Sbjct: 116258 attgggaagctgttgctgatg 116278
>ref|XM_367258.1| Magnaporthe grisea 70-15 hypothetical protein (MG07183.4) partial mRNA Length = 1665 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 caaatacatcaaaaagaaca 336 |||||||||||||||||||| Sbjct: 1221 caaatacatcaaaaagaaca 1240
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctgttgctgatgcactttca 237 |||||||||||||||||||| Sbjct: 10980955 ctgttgctgatgcactttca 10980936
>gb|AC166541.2| Nectria haematococca clone JGIAYWI-5B17, complete sequence Length = 30255 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 gaggaaaacggggtgctgga 206 |||||||||||||||||||| Sbjct: 14339 gaggaaaacggggtgctgga 14358
>emb|AL589843.9| Human DNA sequence from clone RP11-535M15 on chromosome 9 Contains a novel gene, a makorin, ring finger protein, 2 (MKRN2) pseudogene, a novel gene (KIAA0972) and five CpG islands, complete sequence Length = 142527 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cccagtctcagcagtgtgag 119 |||||||||||||||||||| Sbjct: 83395 cccagtctcagcagtgtgag 83414
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ctgttgctgatgcactttca 237 |||||||||||||||||||| Sbjct: 1412 ctgttgctgatgcactttca 1431
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ctgttgctgatgcactttca 237 |||||||||||||||||||| Sbjct: 152167 ctgttgctgatgcactttca 152186
>emb|Z37511.1|SCMEL5 S.cerevisiae gene for alpha-galactosidase Length = 4988 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gatgattgggaagctgttgc 224 |||||||||||||||||||| Sbjct: 4953 gatgattgggaagctgttgc 4972
>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11, complete sequence Length = 132394 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ccagcaatggtggtggcccc 102 |||||||||||||||||||| Sbjct: 30925 ccagcaatggtggtggcccc 30906
>gb|AC144905.10| Mus musculus chromosome 1, clone RP23-293I7, complete sequence Length = 215928 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tatgagtgcagcacatcaga 478 |||||||||||||||||||| Sbjct: 128772 tatgagtgcagcacatcaga 128791
>emb|AJ009797.1|SRE9797 Streptomyces reticuli ceb gene cluster including cebE, cebF, cebG, bglC genes, partial Length = 4308 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ccaagcaggcaagcttcccg 429 |||||||||||||||||||| Sbjct: 1299 ccaagcaggcaagcttcccg 1318
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctgttgctgatgcactttca 237 |||||||||||||||||||| Sbjct: 10977718 ctgttgctgatgcactttca 10977699
>gb|AC064846.5| Homo sapiens BAC clone RP11-59C11 from 2, complete sequence Length = 169988 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agtgcagcacatcagagtat 482 |||||||||||||||||||| Sbjct: 132221 agtgcagcacatcagagtat 132202
>dbj|BS000106.1| Pan troglodytes chromosome 22 clone:PTB-082I14, map 22, complete sequences Length = 148196 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cccagtctcagcagtgtgag 119 |||||||||||||||||||| Sbjct: 13532 cccagtctcagcagtgtgag 13551
>dbj|BS000105.1| Pan troglodytes chromosome 22 clone:RP43-117B17, map 22, complete sequences Length = 164236 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cccagtctcagcagtgtgag 119 |||||||||||||||||||| Sbjct: 151447 cccagtctcagcagtgtgag 151466
>dbj|AK070071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044B08, full insert sequence Length = 1518 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ctgttgctgatgcactttca 237 |||||||||||||||||||| Sbjct: 1254 ctgttgctgatgcactttca 1273
>dbj|AP001694.1| Homo sapiens genomic DNA, chromosome 21q, section 38/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cccagtctcagcagtgtgag 119 |||||||||||||||||||| Sbjct: 81480 cccagtctcagcagtgtgag 81499
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctgttgctgatgcactttca 237 |||||||||||||||||||| Sbjct: 24440 ctgttgctgatgcactttca 24421
>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete sequence Length = 186254 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 agcacatcagagtatcctct 487 |||||||||||||||||||| Sbjct: 154110 agcacatcagagtatcctct 154129
>emb|AL845256.3| Mouse DNA sequence from clone RP23-58M18 on chromosome X, complete sequence Length = 171398 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gttgctgatgcactttcagt 239 |||||||||||||||||||| Sbjct: 16212 gttgctgatgcactttcagt 16193
>dbj|AP000225.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:f30F8, complete sequence Length = 31839 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cccagtctcagcagtgtgag 119 |||||||||||||||||||| Sbjct: 3756 cccagtctcagcagtgtgag 3775
>dbj|AP000138.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone B2291C14-R44F3, segment 3/10, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cccagtctcagcagtgtgag 119 |||||||||||||||||||| Sbjct: 80776 cccagtctcagcagtgtgag 80795
>dbj|AP000086.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533 region, segment 3/7 Length = 100000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cccagtctcagcagtgtgag 119 |||||||||||||||||||| Sbjct: 80776 cccagtctcagcagtgtgag 80795 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,703,042 Number of Sequences: 3902068 Number of extensions: 4703042 Number of successful extensions: 84558 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84286 Number of HSP's gapped (non-prelim): 265 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)