ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbah62b08 | 635 | BJ486626 | not_full | gb|AY255673.1| Triticum aestivum methylmalonate semialdehyde dehydrogenase mRNA, partial cds; nuclear gene for mitochondrial product Length = 1415 | 142 | not_full | MMSA_DROME (Q7KW39) Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (EC 1.2.1.27) (MMSDH) (Malonate-semialdehyde dehydrogenase [acylating]) (EC 1.2.1.18) Length = 520 | 235 | -- | --- | - | -- | --- | - |
| rbah62b04 | 448 | BJ486625 | not_full | gb|BC108770.1| Xenopus laevis cDNA clone IMAGE:6859100, partial cds Length = 2479 | 21 | not_full | FTSI_BUCAP (O85297) Peptidoglycan synthetase ftsI (EC 2.4.1.129) (Peptidoglycan glycosyltransferase 3) (Penicillin-binding protein 3) (PBP-3) Length = 568 | 2 | -- | --- | - | -- | --- | - |
| rbah62b03 | 494 | BJ552953 | not_full | gb|AF005993.1|AF005993 Triticum aestivum 70 kDa heat shock protein (TaHSP70d) mRNA, complete cds Length = 2311 | 426 | not_full | HSP70_MAIZE (P11143) Heat shock 70 kDa protein Length = 645 | 158 | -- | --- | - | -- | --- | - |
| rbah62a24 | 601 | BJ486624 | not_full | dbj|AK058719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E07, full insert sequence Length = 2082 | 24 | not_full | IF2C_ARATH (Q9SHI1) Translation initiation factor IF-2, chloroplast precursor Length = 1016 | 261 | -- | --- | - | -- | --- | - |
| rbah62a23 | 561 | BJ486623 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 82 | not_full | TOC75_ORYSA (Q84Q83) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) Length = 817 | 9 | -- | --- | - | -- | --- | - |
| rbah62a20 | 517 | BJ486622 | not_full | dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full insert sequence Length = 2183 | 67 | not_full | FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-) Length = 627 | 118 | -- | --- | - | -- | --- | - |
| rbah62a17 | 434 | BJ486621 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 96 | not_full | FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-) Length = 627 | 103 | -- | --- | - | -- | --- | - |
| rbah62a16 | 598 | BJ486620 | not_full | dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate peroxidase, complete cds Length = 1089 | 112 | not_full | APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11) Length = 291 | 57 | -- | --- | - | -- | --- | - |
| rbah62a13 | 513 | BJ552952 | not_full | gb|AY039003.1| Hordeum vulgare subsp. vulgare Mg-chelatase subunit XANTHA-F (Xantha-f) gene, complete cds Length = 6252 | 91 | not_full | BCHH_RHOS4 (Q9RFD5) Magnesium-chelatase subunit H (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase subunit H) Length = 1193 | 17 | -- | --- | - | -- | --- | - |
| rbah62a12 | 565 | BJ552951 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 136 | -- | --- | - | -- | --- | - |
| rbah62a11 | 462 | BJ486619 | not_full | ref|XM_466811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2403 | 37 | not_full | PUB2_SCHPO (Q9UTG2) E3 ubiquitin--protein ligase pub2 (EC 6.3.2.-) Length = 671 | 9 | -- | --- | - | -- | --- | - |
| rbah62a10 | 522 | BJ486618 | not_full | emb|AJ251052.1|AFA251052 Avena fatua mRNA for VIP3 protein (vip3 gene) Length = 762 | 53 | not_full | PFD4_AVEFA (Q9M4C4) Probable prefoldin subunit 4 (VIP3 protein) Length = 126 | 13 | -- | --- | - | -- | --- | - |
| rbah62a09 | 417 | BJ486617 | not_full | gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 | 121 | not_full | MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (Interferon-beta promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) (CARD adapter inducing interferon-beta) (Cardif) (Putative NF-kappa-B-activating protein 031N) Length = | 20 | -- | --- | - | -- | --- | - |
| rbah62a08 | 663 | BJ486616 | not_full | ref|NM_187458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 | 47 | not_full | METK_BACHD (Q9K7Q9) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) (MAT) Length = 399 | 1 | -- | --- | - | -- | --- | - |
| rbah62a07 | 187 | BJ486615 | not_full | dbj|D86327.1| Triticum aestivum mRNA for catalase, complete cds Length = 1573 | 56 | not_full | CATA2_MAIZE (P12365) Catalase isozyme 2 (EC 1.11.1.6) Length = 491 | 39 | -- | --- | - | -- | --- | - |
| rbah62a06 | 345 | BJ486614 | full | emb|AJ457980.1|TAE457980 Triticum aestivum mRNA for ferredoxin-NADP(H) oxidoreductase (fnr gene), clone 2 Length = 1092 | 125 | not_full | FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) Length = 365 | 27 | -- | --- | - | -- | --- | - |
| rbah62a03 | 338 | BJ486613 | not_full | dbj|AK068172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129D15, full insert sequence Length = 2276 | 30 | not_full | PUR6_SYNY3 (Q55498) Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 176 | 38 | -- | --- | - | -- | --- | - |
| rbah62a02 | 593 | BJ486612 | not_full | ref|NM_187458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 | 24 | not_full | EWG_DROME (Q24312) DNA-binding protein Ewg (Protein erect wing) Length = 733 | 7 | -- | --- | - | -- | --- | - |
| rbah61p23 | 601 | BJ486611 | not_full | dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate peroxidase, complete cds Length = 1089 | 112 | not_full | APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11) Length = 291 | 54 | -- | --- | - | -- | --- | - |
| rbah61p22 | 581 | BJ486610 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 187 | not_full | GATA4_ARATH (O49743) GATA transcription factor 4 (AtGATA-4) Length = 240 | 97 | -- | --- | - | -- | --- | - |
| rbah61p21 | 468 | BJ486609 | not_full | gb|AY104824.1| Zea mays PCO117330 mRNA sequence Length = 1365 | 26 | not_full | ARAL_BACSU (P94526) Arabinose operon protein araL Length = 272 | 34 | -- | --- | - | -- | --- | - |
| rbah61p20 | 336 | BJ486608 | not_full | emb|AJ234414.1|HVU234414 Hordeum vulgare partial mRNA; clone cMWG0676.uni Length = 348 | 7 | not_full | STT7_ARATH (Q9S713) Serine/threonine-protein kinase SNT7, chloroplast precursor (EC 2.7.11.1) (Stt7 homolog) Length = 562 | 2 | -- | --- | - | -- | --- | - |
| rbah61p18 | 612 | BJ486606 | not_full | gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genomic sequence, complete sequence Length = 129440 | 51 | not_full | MKS1_HUMAN (Q9NXB0) Meckel syndrome type 1 protein Length = 559 | 10 | -- | --- | - | -- | --- | - |
| rbah61p17 | 704 | BJ486605 | not_full | ref|XM_465037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1034 | 21 | not_full | ZAN_RABIT (P57999) Zonadhesin (Fragment) Length = 2282 | 2 | -- | --- | - | -- | --- | - |
| rbah61p16 | 588 | BJ486604 | not_full | gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg1 region, genomic sequence Length = 3124 | 208 | not_full | DCBD2_HUMAN (Q96PD2) Discoidin, CUB and LCCL domain-containing protein 2 precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) (CUB, LCCL and coagulation factor V/VIII-homology domains protein 1) Length = 775 | 1 | -- | --- | - | -- | --- | - |
| rbah61p14 | 495 | BJ486603 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 64 | not_full | APGM_METKA (P58813) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) Length = 422 | 33 | -- | --- | - | -- | --- | - |
| rbah61p13 | 513 | BJ486602 | not_full | gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 | 51 | not_full | SSY1_WHEAT (Q43654) Starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS I) (Starch synthase I-2) (SS I-2) Length = 647 | 71 | -- | --- | - | -- | --- | - |
| rbah61p12 | 611 | BJ486601 | not_full | dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate peroxidase, complete cds Length = 1089 | 114 | not_full | APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11) Length = 291 | 52 | -- | --- | - | -- | --- | - |
| rbah61p11 | 612 | BJ486600 | not_full | gb|AY781786.1| Leymus multicaulis glutathione reductase (GR) mRNA, partial cds Length = 408 | 42 | not_full | GSHRP_TOBAC (P80461) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) Length = 557 | 116 | -- | --- | - | -- | --- | - |
| rbah61p10 | 682 | BJ486599 | not_full | dbj|AB110204.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, contig of clone: OsNMCP1aSE2Nco-5 and 12FPG031 Length = 3708 | 51 | not_full | BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted) Length = 1206 | 13 | -- | --- | - | -- | --- | - |
| rbah61p07 | 584 | BJ486598 | not_full | gb|AY107758.1| Zea mays PCO143163 mRNA sequence Length = 1380 | 57 | not_full | S12A1_RAT (P55016) Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter) Length = 1095 | 24 | -- | --- | - | -- | --- | - |
| rbah61p04 | 538 | BJ486597 | not_full | gb|BT016998.1| Zea mays clone EK07D2309C06.c mRNA sequence Length = 679 | 102 | not_full | RIN4_ARATH (Q8GYN5) RPM1-interacting protein 4 Length = 211 | 21 | -- | --- | - | -- | --- | - |
| rbah61p03 | 532 | BJ486596 | not_full | gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine aminotransferase mRNA, 3NULL UTR and partial cds Length = 583 | 56 | not_full | ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 | 30 | -- | --- | - | -- | --- | - |
| rbah61p02 | 533 | BJ486595 | not_full | emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 | 200 | not_full | PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 | 31 | -- | --- | - | -- | --- | - |
| rbah61p01 | 468 | BJ486594 | not_full | emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 | 500 | not_full | CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) Length = 268 | 111 | -- | --- | - | -- | --- | - |
| rbah61o24 | 470 | BJ486593 | not_full | gb|AY398372.1| Danio rerio clone RK138A4C07 charged multivesicular body protein 1/chromatin modifying protein 1 (KM0004) mRNA, complete cds Length = 1569 | 32 | not_full | SAP_CHICK (O13035) Proactivator polypeptide precursor [Contains: Saposin A; Saposin B; Saposin C; Saposin D] Length = 518 | 16 | -- | --- | - | -- | --- | - |
| rbah61o23 | 684 | BJ486592 | not_full | emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 | 49 | not_full | DDR48_YEAST (P18899) Stress protein DDR48 (DNA damage-responsive protein 48) (DDRP 48) (YP 75) (Flocculent-specific protein) Length = 429 | 195 | -- | --- | - | -- | --- | - |
| rbah61o22 | 309 | BJ486591 | not_full | gb|AY500857.1| Penaeus monodon microsatellite PM1091 sequence Length = 781 | 115 | not_full | VPA_BP186 (P41064) Replication gene A protein (GpA) Length = 694 | 2 | -- | --- | - | -- | --- | - |
| rbah61o21 | 626 | BJ486590 | not_full | gb|BT009218.1| Triticum aestivum clone wle1n.pk0060.c11:fis, full insert mRNA sequence Length = 1940 | 25 | not_full | TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein Length = 507 | 53 | -- | --- | - | -- | --- | - |
| rbah61o20 | 560 | BJ552950 | not_full | gb|U58209.1|ZMU58209 Zea mays lumenal binding protein cBiPe3 mRNA, complete cds Length = 2365 | 500 | not_full | BIP3_MAIZE (O24581) Luminal-binding protein 3 precursor (BiP3) Length = 663 | 368 | -- | --- | - | -- | --- | - |
| rbah61o18 | 422 | BJ486589 | not_full | gb|AC122331.4| Mus musculus BAC clone RP23-344I7 from chromosome 18, complete sequence Length = 227966 | 14 | not_full | WNT2_DROME (P28465) Protein Wnt-2 precursor (dWnt-2) Length = 352 | 15 | -- | --- | - | -- | --- | - |
| rbah61o16 | 469 | BJ486588 | not_full | gb|AF343492.1| Aegilops speltoides subsp. speltoides clone pla2 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1457 | 500 | not_full | TRXB_STRCO (P52215) Thioredoxin reductase (EC 1.8.1.9) (TRXR) Length = 321 | 3 | -- | --- | - | -- | --- | - |
| rbah61o15 | 625 | BJ486587 | not_full | gb|AY863051.1| Zea mays putative methyl-binding domain protein MBD115 mRNA, complete cds Length = 1456 | 147 | not_full | P60_LISMO (P21171) Protein p60 precursor (Invasion-associated protein) Length = 484 | 29 | -- | --- | - | -- | --- | - |
| rbah61o14 | 533 | BJ486586 | not_full | gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3NULL end Length = 1394 | 68 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 34 | -- | --- | - | -- | --- | - |
| rbah61o11 | 644 | BJ486585 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 24 | not_full | SCE3_SCHPO (O14369) Probable RNA-binding protein sce3 Length = 388 | 293 | -- | --- | - | -- | --- | - |
| rbah61o10 | 597 | BJ486584 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_AEGCR (P25413) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| rbah61o09 | 559 | BJ486583 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 450 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 165 | -- | --- | - | -- | --- | - |
| rbah61o07 | 572 | BJ486582 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 77 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 24 | -- | --- | - | -- | --- | - |
| rbah61o06 | 363 | BJ552949 | not_full | gb|AF384103.2| Triticum aestivum zeaxanthin epoxidase (WZE) mRNA, partial cds Length = 1411 | 26 | not_full | RAD17_MOUSE (Q6NXW6) Cell cycle checkpoint protein RAD17 Length = 688 | 10 | -- | --- | - | -- | --- | - |
| rbah61o05 | 297 | BJ552948 | not_full | gb|AF384103.2| Triticum aestivum zeaxanthin epoxidase (WZE) mRNA, partial cds Length = 1411 | 21 | not_full | RAD17_MOUSE (Q6NXW6) Cell cycle checkpoint protein RAD17 Length = 688 | 4 | -- | --- | - | -- | --- | - |
