ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genom... 56 1e-04
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 1e-04
3gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genom... 56 1e-04
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
5dbj|AK068759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
6emb|AL160171.27| Human DNA sequence from clone RP11-256E16 on ch... 44 0.53
7emb|AL663045.7| Mouse DNA sequence from clone RP23-219K7 on chro... 44 0.53
8gb|AF348157.1|AF348157 Mus musculus putative prostate cancer sus... 44 0.53
9emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chro... 44 0.53
10gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, co... 42 2.1
11emb|CR700395.2|CNS0G3DJ Tetraodon nigroviridis full-length cDNA 42 2.1
12ref|XM_466724.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
13gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 8.3
14ref|NM_001003300.1| Canis familiaris potassium large conductance... 40 8.3
15gb|AC127241.3| Mus musculus BAC clone RP24-403D23 from chromosom... 40 8.3
16gb|AY040849.1| Homo sapiens large conductance calcium-activated ... 40 8.3
17ref|NM_001032810.1| Macaca mulatta calcium-activated potassium c... 40 8.3
18gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 8.3
19emb|AL691514.5| Human DNA sequence from clone RP11-105M16 on chr... 40 8.3
20ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 8.3
21gb|AY862880.1| Bos taurus large conductance calcium-activated po... 40 8.3
22gb|AY862879.1| Bos taurus large conductance calcium-activated po... 40 8.3
23ref|NM_002247.2| Homo sapiens potassium large conductance calciu... 40 8.3
24ref|NM_001014797.1| Homo sapiens potassium large conductance cal... 40 8.3
25gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 8.3
26gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 8.3
27gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 8.3
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
29gb|AC007876.2|AC007876 Homo sapiens BAC clone RP11-65G9 from Y, ... 40 8.3
30ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 8.3
31gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.3
32gb|U11058.2|HSU11058 Homo sapiens large conductance calcium- and... 40 8.3
33dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
34dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
35dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
36dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
37emb|BX648925.1|HSM809076 Homo sapiens mRNA; cDNA DKFZp686K1437 (... 40 8.3
38dbj|AB113575.1| Homo sapiens BKTM mRNA for BK variant stretch-ac... 40 8.3
39dbj|AB113382.1| Homo sapiens SAKCA mRNA for stretch-activated Kc... 40 8.3
40dbj|AK099971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
41gb|AF118141.1|AF118141 Homo sapiens BKCA alpha subunit mRNA, com... 40 8.3
42dbj|AP001874.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3
43gb|U11717.1|HSU11717 Human calcium activated potassium channel (... 40 8.3
44gb|AF026001.1|AF026001 Macaca mulatta calcium-activated potassiu... 40 8.3
45gb|AF025999.1|AF025999 Homo sapiens calcium-activated potassium ... 40 8.3
46dbj|AB209488.1| Homo sapiens mRNA for large conductance calcium-... 40 8.3
47gb|U23767.1|HSU23767 Human calcium-activated potassium channel (... 40 8.3
48gb|U13913.1|HSU13913 Human large-conductance calcium-activated p... 40 8.3
49gb|U41001.1|CFU41001 Canis familiaris calcium activated potassiu... 40 8.3
50gb|U09384.1|HSU09384 Human calcium-activated potassium channel m... 40 8.3
51emb|AL669932.14| Mouse DNA sequence from clone RP23-430P1 on chr... 40 8.3 
>gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genomic sequence, complete
             sequence
          Length = 129440

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 529   gttgaatttactggctgctcatgctgacctttcaaagaggttgaatta 576
             ||||||||| || ||||||| || ||||||||||||||||| ||||||
Sbjct: 97248 gttgaatttgcttgctgctcttgttgacctttcaaagaggtcgaatta 97201
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 529      gttgaatttactggctgctcatgctgacctttcaaagaggttgaatta 576
                ||||||||| || ||||||| || ||||||||||||||||| ||||||
Sbjct: 29265381 gttgaatttgcttgctgctcttgttgacctttcaaagaggtcgaatta 29265334
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>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete
             sequence
          Length = 139788

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 529   gttgaatttactggctgctcatgctgacctttcaaagaggttgaatta 576
             ||||||||| || ||||||| || ||||||||||||||||| ||||||
Sbjct: 90619 gttgaatttgcttgctgctcttgttgacctttcaaagaggtcgaatta 90666
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 529      gttgaatttactggctgctcatgctgacctttcaaagaggttgaatta 576
                ||||||||| || ||||||| || ||||||||||||||||| ||||||
Sbjct: 29356809 gttgaatttgcttgctgctcttgttgacctttcaaagaggtcgaatta 29356762
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>dbj|AK068759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158A20, full
            insert sequence
          Length = 2062

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 529  gttgaatttactggctgctcatgctgacctttcaaagaggttgaatta 576
            ||||||||| || ||||||| || ||||||||||||||||| ||||||
Sbjct: 1538 gttgaatttgcttgctgctcttgttgacctttcaaagaggtcgaatta 1491
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>emb|AL160171.27| Human DNA sequence from clone RP11-256E16 on chromosome 1 Contains a
              novel gene, a novel gene (FLJ30525), the 5' end of a novel
              gene (FLJ10330) and a CpG island, complete sequence
          Length = 161273

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 122    ctaggcaaacacaaagcaggtc 143
              ||||||||||||||||||||||
Sbjct: 144954 ctaggcaaacacaaagcaggtc 144933
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>emb|AL663045.7| Mouse DNA sequence from clone RP23-219K7 on chromosome 11 Contains
            the Elac2 gene for elaC homolog 2 (E. coli), a novel
            gene, a peroxiredoxin 6 (Prdx6) pseudogene, a novel gene
            (1700086D15Rik), a novel pseudogene, and two CpG islands,
            complete sequence
          Length = 196566

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 115  atgtactctaggcaaacacaaa 136
            ||||||||||||||||||||||
Sbjct: 5230 atgtactctaggcaaacacaaa 5209
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>gb|AF348157.1|AF348157 Mus musculus putative prostate cancer susceptibility protein (Elac2)
             gene, complete cds, alternatively spliced
          Length = 34593

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 115   atgtactctaggcaaacacaaa 136
             ||||||||||||||||||||||
Sbjct: 10890 atgtactctaggcaaacacaaa 10869
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>emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chromosome 2, complete
              sequence
          Length = 189104

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 494    cagtgaatggttttgtttggtt 515
              ||||||||||||||||||||||
Sbjct: 174515 cagtgaatggttttgtttggtt 174536
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>gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, complete sequence
          Length = 218858

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 347   cttctttattgctcaccagag 367
             |||||||||||||||||||||
Sbjct: 30525 cttctttattgctcaccagag 30545
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>emb|CR700395.2|CNS0G3DJ Tetraodon nigroviridis full-length cDNA
          Length = 1776

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 188 catcctggatggaagtcctacaaac 212
           |||||||||||||||||| ||||||
Sbjct: 78  catcctggatggaagtcccacaaac 54
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>ref|XM_466724.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2934

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 ccttctgggtgtcgccggct 345
           ||||||||||||||||||||
Sbjct: 815 ccttctgggtgtcgccggct 796
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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
           alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 822 ccatttggtggagaattcag 841
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>ref|NM_001003300.1| Canis familiaris potassium large conductance calcium-activated
           channel, subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 3480

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 768 ccatttggtggagaattcag 787
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>gb|AC127241.3| Mus musculus BAC clone RP24-403D23 from chromosome 16, complete
             sequence
          Length = 146434

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 190   tcctggatggaagtcctacaaact 213
             |||||||||||||| |||||||||
Sbjct: 80501 tcctggatggaagttctacaaact 80524
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>gb|AY040849.1| Homo sapiens large conductance calcium-activated potassium channel
           subfamily M alpha member 1 (KCNMA1) mRNA, complete cds
          Length = 3577

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 896 ccatttggtggagaattcag 915
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>ref|NM_001032810.1| Macaca mulatta calcium-activated potassium channel alpha subunit
           (KCNMA1), mRNA
          Length = 3456

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 873 ccatttggtggagaattcag 892
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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
           complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 876 ccatttggtggagaattcag 895
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>emb|AL691514.5| Human DNA sequence from clone RP11-105M16 on chromosome 10, complete
              sequence
          Length = 154348

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    aggttgaattacttgtcact 585
              ||||||||||||||||||||
Sbjct: 146690 aggttgaattacttgtcact 146709
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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ccatttggtggagaattcag 476
            ||||||||||||||||||||
Sbjct: 1192 ccatttggtggagaattcag 1211
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>gb|AY862880.1| Bos taurus large conductance calcium-activated potassium channel
           alpha subunit isoform B (Kcnma1) mRNA, partial cds,
           alternatively spliced
          Length = 945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 774 ccatttggtggagaattcag 793
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>gb|AY862879.1| Bos taurus large conductance calcium-activated potassium channel
           alpha subunit isoform A (Kcnma1) mRNA, partial cds,
           alternatively spliced
          Length = 783

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 612 ccatttggtggagaattcag 631
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>ref|NM_002247.2| Homo sapiens potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), transcript variant
            2, mRNA
          Length = 6103

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ccatttggtggagaattcag 476
            ||||||||||||||||||||
Sbjct: 1131 ccatttggtggagaattcag 1150
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>ref|NM_001014797.1| Homo sapiens potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), transcript variant
            1, mRNA
          Length = 11993

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ccatttggtggagaattcag 476
            ||||||||||||||||||||
Sbjct: 1131 ccatttggtggagaattcag 1150
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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
           alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 916 ccatttggtggagaattcag 935
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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ccatttggtggagaattcag 476
            ||||||||||||||||||||
Sbjct: 1283 ccatttggtggagaattcag 1302
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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ccatttggtggagaattcag 476
            ||||||||||||||||||||
Sbjct: 1192 ccatttggtggagaattcag 1211
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 326      ccttctgggtgtcgccggct 345
                ||||||||||||||||||||
Sbjct: 24297943 ccttctgggtgtcgccggct 24297924



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 55      ggtataatgtctcttccaac 74
               ||||||||||||||||||||
Sbjct: 1122297 ggtataatgtctcttccaac 1122316
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>gb|AC007876.2|AC007876 Homo sapiens BAC clone RP11-65G9 from Y, complete sequence
          Length = 164879

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ctctaggcaaacacaaagca 139
              ||||||||||||||||||||
Sbjct: 163821 ctctaggcaaacacaaagca 163802
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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
           (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 876 ccatttggtggagaattcag 895
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 263     ccaggagaacttcaccttcgccga 286
               |||||||||| |||||||||||||
Sbjct: 4703386 ccaggagaacctcaccttcgccga 4703409
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>gb|U11058.2|HSU11058 Homo sapiens large conductance calcium- and voltage-dependent
           potassium channel alpha subunit (MaxiK) mRNA, complete
           cds
          Length = 5829

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 845 ccatttggtggagaattcag 864
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>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1020_C02
          Length = 124578

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ggtataatgtctcttccaac 74
             ||||||||||||||||||||
Sbjct: 74821 ggtataatgtctcttccaac 74840
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>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0088N06
          Length = 123454

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     ggtataatgtctcttccaac 74
              ||||||||||||||||||||
Sbjct: 111005 ggtataatgtctcttccaac 111024
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>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2055_H10
          Length = 119290

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   ccttctgggtgtcgccggct 345
             ||||||||||||||||||||
Sbjct: 98331 ccttctgggtgtcgccggct 98312
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>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0407A09
          Length = 103788

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   ccttctgggtgtcgccggct 345
             ||||||||||||||||||||
Sbjct: 27481 ccttctgggtgtcgccggct 27462
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>emb|BX648925.1|HSM809076 Homo sapiens mRNA; cDNA DKFZp686K1437 (from clone DKFZp686K1437)
          Length = 3165

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 205 ccatttggtggagaattcag 224
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>dbj|AB113575.1| Homo sapiens BKTM mRNA for BK variant stretch-activated Kca
           channel, complete cds
          Length = 3588

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 882 ccatttggtggagaattcag 901
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>dbj|AB113382.1| Homo sapiens SAKCA mRNA for stretch-activated Kca channel, complete
           cds
          Length = 3751

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 896 ccatttggtggagaattcag 915
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>dbj|AK099971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127M11, full
           insert sequence
          Length = 2934

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 ccttctgggtgtcgccggct 345
           ||||||||||||||||||||
Sbjct: 815 ccttctgggtgtcgccggct 796
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>gb|AF118141.1|AF118141 Homo sapiens BKCA alpha subunit mRNA, complete cds
          Length = 3364

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 759 ccatttggtggagaattcag 778
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>dbj|AP001874.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2238L14, complete
             sequence
          Length = 124167

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 558   tttcaaagaggttgaattacttgt 581
             |||||||||||||||||| |||||
Sbjct: 74431 tttcaaagaggttgaattccttgt 74408
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>gb|U11717.1|HSU11717 Human calcium activated potassium channel (hslo) mRNA, complete cds
          Length = 3769

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 906 ccatttggtggagaattcag 925
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>gb|AF026001.1|AF026001 Macaca mulatta calcium-activated potassium channel alpha subunit
           mRNA, complete cds
          Length = 3456

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 873 ccatttggtggagaattcag 892
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>gb|AF025999.1|AF025999 Homo sapiens calcium-activated potassium channel alpha subunit
           mRNA, complete cds
          Length = 3465

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 882 ccatttggtggagaattcag 901
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>dbj|AB209488.1| Homo sapiens mRNA for large conductance calcium-activated potassium
           channel subfamily M alpha member 1 variant protein
          Length = 11401

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 537 ccatttggtggagaattcag 556
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>gb|U23767.1|HSU23767 Human calcium-activated potassium channel (hSlo) mRNA, complete cds
          Length = 3537

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 954 ccatttggtggagaattcag 973
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>gb|U13913.1|HSU13913 Human large-conductance calcium-activated potassium channel (hSlo)
            mRNA, complete cds
          Length = 4149

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ccatttggtggagaattcag 476
            ||||||||||||||||||||
Sbjct: 1032 ccatttggtggagaattcag 1051
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>gb|U41001.1|CFU41001 Canis familiaris calcium activated potassium channel protein mRNA,
           complete cds
          Length = 3480

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 768 ccatttggtggagaattcag 787
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>gb|U09384.1|HSU09384 Human calcium-activated potassium channel mRNA, partial cds
          Length = 2016

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccatttggtggagaattcag 476
           ||||||||||||||||||||
Sbjct: 949 ccatttggtggagaattcag 968
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>emb|AL669932.14| Mouse DNA sequence from clone RP23-430P1 on chromosome 2, complete
             sequence
          Length = 148257

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 542   gctgctcatgctgacctttc 561
             ||||||||||||||||||||
Sbjct: 61444 gctgctcatgctgacctttc 61425


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,774,969
Number of Sequences: 3902068
Number of extensions: 4774969
Number of successful extensions: 94640
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94418
Number of HSP's gapped (non-prelim): 222
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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