ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ251052.1|AFA251052 Avena fatua mRNA for VIP3 protein (vip3... 228 1e-56
2gb|BT017935.1| Zea mays clone EL01N0520E08.c mRNA sequence 216 5e-53
3emb|AJ310146.1|ZMA310146 Zea mays mRNA for VIP3 protein 216 5e-53
4emb|AJ310145.1|ZMA310145 Zea mays vip3 gene, exons 1-3 216 5e-53
5gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome... 210 3e-51
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 210 3e-51
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
8dbj|AK103619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
9gb|BT017822.1| Zea mays clone EL01N0508B09.c mRNA sequence 192 8e-46
10gb|AY110513.1| Zea mays CL5714_1 mRNA sequence 141 3e-30
11gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, compl... 48 0.029
12ref|NM_020893.1| Homo sapiens KIAA1529 (KIAA1529), mRNA 46 0.11
13gb|BC047097.1| Homo sapiens KIAA1529, mRNA (cDNA clone IMAGE:526... 46 0.11
14gb|BC112930.1| Homo sapiens KIAA1529, mRNA (cDNA clone IMAGE:647... 46 0.11
15emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chrom... 46 0.11
16emb|CR749320.1| Homo sapiens mRNA; cDNA DKFZp686B2031 (from clon... 46 0.11
17emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chr... 46 0.11
18dbj|AB040962.1| Homo sapiens mRNA for KIAA1529 protein, partial cds 46 0.11
19emb|AL109627.18|HSJ733M16 Human DNA sequence from clone RP4-733M... 44 0.45
20emb|AL606533.4| Mouse DNA sequence from clone RP23-312D21 on chr... 44 0.45
21gb|AC093925.5| Genomic sequence for Mus musculus, clone RP23-304... 44 0.45
22gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, c... 42 1.8
23gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, com... 42 1.8
24gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete s... 42 1.8
25ref|XM_786216.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.8
26emb|BX323996.10| Zebrafish DNA sequence from clone CH211-12K10 i... 42 1.8
27gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold 42 1.8
28gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomi... 42 1.8
29emb|BX005249.6| Zebrafish DNA sequence from clone CH211-188M4, c... 42 1.8
30gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, com... 42 1.8
31ref|XM_359717.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.1
32gb|AC091094.2| Felis catus clone RP86-317G18, complete sequence 40 7.1
33emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chr... 40 7.1
34emb|BX890550.10| Zebrafish DNA sequence from clone DKEYP-110B6 i... 40 7.1
35emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on ch... 40 7.1
36emb|AL627256.5| Zebrafish DNA sequence from clone RP71-1L10 in l... 40 7.1
37gb|AC090607.6| Homo sapiens chromosome 15, clone RP11-762H8, com... 40 7.1
38gb|AC099567.2| Homo sapiens chromosome 1 clone RP5-936J12, compl... 40 7.1
39ref|XM_692898.1| PREDICTED: Danio rerio similar to vacuolar prot... 40 7.1
40dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
42gb|AC142455.4| Mus musculus BAC clone RP23-179B15 from chromosom... 40 7.1
43gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-19... 40 7.1
44dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 7.1
45gb|AC153534.2| Mus musculus 10 BAC RP23-360K7 (Roswell Park Canc... 40 7.1
46gb|AC153863.6| Mus musculus 10 BAC RP23-149M7 (Roswell Park Canc... 40 7.1
47dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
48dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
49dbj|AP004649.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
50gb|AC154598.2| Mus musculus BAC clone RP23-356P6 from 14, comple... 40 7.1
51gb|AF101105.1|COL11A1G27 Homo sapiens collagen type XI alpha-1 (... 40 7.1
52emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chro... 40 7.1
53emb|AL840633.8| Mouse DNA sequence from clone RP23-290E9 on chro... 40 7.1 
>emb|AJ251052.1|AFA251052 Avena fatua mRNA for VIP3 protein (vip3 gene)
          Length = 762

 Score =  228 bits (115), Expect = 1e-56
 Identities = 204/234 (87%)
 Strand = Plus / Minus

                                                                       
Query: 285 tcaatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttcttcagttc 344
           |||||| ||||||| ||||||||| ||   ||| ||||||||||||||||||||||| ||
Sbjct: 439 tcaatcctcctccaagttgatggcatccttaaacttcccgtagaggatcttcttcagctc 380

                                                                       
Query: 345 ggccatctgggcaaggatggattccttctcttcctccagcttctctaacttcttagccgc 404
           |||||||||||| ||||||||||||||||| ||||||||| |||| | ||||||||| ||
Sbjct: 379 ggccatctgggcgaggatggattccttctcctcctccagcctctccagcttcttagctgc 320

                                                                       
Query: 405 atcctctttcatctgctctagcctagtttccacatcgtccactggcatgtgggcaaacac 464
           ||| |||||||||||||| ||||||| |||||| || |||| ||||||||||||||||||
Sbjct: 319 atcttctttcatctgctccagcctagcttccacgtcatccattggcatgtgggcaaacac 260

                                                                 
Query: 465 ttccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattccc 518
            || ||||| |||||||||||||| |  |||||| ||| ||| || ||||||||
Sbjct: 259 ctctccaatctggaaacgcaccacgtcctcatcacacaggataagctcattccc 206



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 191 cacgagaaacaatgtagcgagaagaacaaagcacctgaacaagaacag 238
           |||||||||||||||| ||  |||| |||||||||||||  |||||||
Sbjct: 532 cacgagaaacaatgtatcggaaagagcaaagcacctgaagtagaacag 485
to top
>gb|BT017935.1| Zea mays clone EL01N0520E08.c mRNA sequence
          Length = 743

 Score =  216 bits (109), Expect = 5e-53
 Identities = 201/232 (86%)
 Strand = Plus / Minus

                                                                       
Query: 287 aatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttcttcagttcgg 346
           |||||||||||||||||||||| ||    || |||||||| || ||||||||||| ||||
Sbjct: 552 aatcttcctccaggttgatggcatccttgaacttcccgtacagtatcttcttcagctcgg 493

                                                                       
Query: 347 ccatctgggcaaggatggattccttctcttcctccagcttctctaacttcttagccgcat 406
           |||||||||| |||||||||||||| || ||||| | | |||| | ||||||||||||||
Sbjct: 492 ccatctgggccaggatggattccttttcctcctctaacctctccagcttcttagccgcat 433

                                                                       
Query: 407 cctctttcatctgctctagcctagtttccacatcgtccactggcatgtgggcaaacactt 466
           |||||||||||||||| |||||||| || || || |||  ||||||||| ||||||||||
Sbjct: 432 cctctttcatctgctccagcctagtctcgacgtcatcccttggcatgtgagcaaacactt 373

                                                               
Query: 467 ccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattccc 518
           ||||||||||||| || || || | |||||| ||||||||||||||||||||
Sbjct: 372 ccccaatttggaagcgtacaacgtcttcatccgacaagatgagttcattccc 321
to top
>emb|AJ310146.1|ZMA310146 Zea mays mRNA for VIP3 protein
          Length = 735

 Score =  216 bits (109), Expect = 5e-53
 Identities = 201/232 (86%)
 Strand = Plus / Minus

                                                                       
Query: 287 aatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttcttcagttcgg 346
           |||||||||||||||||||||| ||    || |||||||| || ||||||||||| ||||
Sbjct: 539 aatcttcctccaggttgatggcatccttgaacttcccgtacagtatcttcttcagctcgg 480

                                                                       
Query: 347 ccatctgggcaaggatggattccttctcttcctccagcttctctaacttcttagccgcat 406
           |||||||||| |||||||||||||| || ||||| | | |||| | ||||||||||||||
Sbjct: 479 ccatctgggccaggatggattccttttcctcctctaacctctccagcttcttagccgcat 420

                                                                       
Query: 407 cctctttcatctgctctagcctagtttccacatcgtccactggcatgtgggcaaacactt 466
           |||||||||||||||| |||||||| || || || |||  ||||||||| ||||||||||
Sbjct: 419 cctctttcatctgctccagcctagtctcgacgtcatcccttggcatgtgagcaaacactt 360

                                                               
Query: 467 ccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattccc 518
           ||||||||||||| || || || | |||||| ||||||||||||||||||||
Sbjct: 359 ccccaatttggaagcgtacaacgtcttcatccgacaagatgagttcattccc 308
to top
>emb|AJ310145.1|ZMA310145 Zea mays vip3 gene, exons 1-3
          Length = 6738

 Score =  216 bits (109), Expect = 5e-53
 Identities = 201/232 (86%)
 Strand = Plus / Minus

                                                                        
Query: 287  aatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttcttcagttcgg 346
            |||||||||||||||||||||| ||    || |||||||| || ||||||||||| ||||
Sbjct: 5035 aatcttcctccaggttgatggcatccttgaacttcccgtacagtatcttcttcagctcgg 4976

                                                                        
Query: 347  ccatctgggcaaggatggattccttctcttcctccagcttctctaacttcttagccgcat 406
            |||||||||| |||||||||||||| || ||||| | | |||| | ||||||||||||||
Sbjct: 4975 ccatctgggccaggatggattccttttcctcctctaacctctccagcttcttagccgcat 4916

                                                                        
Query: 407  cctctttcatctgctctagcctagtttccacatcgtccactggcatgtgggcaaacactt 466
            |||||||||||||||| |||||||| || || || |||  ||||||||| ||||||||||
Sbjct: 4915 cctctttcatctgctccagcctagtctcgacgtcatcccttggcatgtgagcaaacactt 4856

                                                                
Query: 467  ccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattccc 518
            ||||||||||||| || || || | |||||| ||||||||||||||||||||
Sbjct: 4855 ccccaatttggaagcgtacaacgtcttcatcggacaagatgagttcattccc 4804
to top
>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map
             near E1419S, complete sequence
          Length = 133421

 Score =  210 bits (106), Expect = 3e-51
 Identities = 207/241 (85%)
 Strand = Plus / Minus

                                                                         
Query: 278   ctcgacatcaatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttct 337
             ||||| || ||||||| |||||||||||||| ||    || || ||||| || |||||||
Sbjct: 97215 ctcgatattaatcttcttccaggttgatggcgtccttgaactttccgtacagtatcttct 97156

                                                                         
Query: 338   tcagttcggccatctgggcaaggatggattccttctcttcctccagcttctctaacttct 397
             ||||||| ||||||||||  | ||||||||||||||| | ||||||| |||| |||||||
Sbjct: 97155 tcagttcagccatctgggagacgatggattccttctcctgctccagcctctccaacttct 97096

                                                                         
Query: 398   tagccgcatcctctttcatctgctctagcctagtttccacatcgtccactggcatgtggg 457
             |||| |||||||||||||||||||| ||||| || |||||||| |||  |||||||||||
Sbjct: 97095 tagctgcatcctctttcatctgctccagccttgtctccacatcatcccttggcatgtggg 97036

                                                                         
Query: 458   caaacacttccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattcc 517
             |||||||||| ||||||||||| |||||||| | ||| || |||| ||||||||||||||
Sbjct: 97035 caaacacttctccaatttggaaccgcaccacgtcttcgtctgacaggatgagttcattcc 96976

              
Query: 518   c 518
             |
Sbjct: 96975 c 96975
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  210 bits (106), Expect = 3e-51
 Identities = 207/241 (85%)
 Strand = Plus / Plus

                                                                            
Query: 278      ctcgacatcaatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttct 337
                ||||| || ||||||| |||||||||||||| ||    || || ||||| || |||||||
Sbjct: 23806735 ctcgatattaatcttcttccaggttgatggcgtccttgaactttccgtacagtatcttct 23806794

                                                                            
Query: 338      tcagttcggccatctgggcaaggatggattccttctcttcctccagcttctctaacttct 397
                ||||||| ||||||||||  | ||||||||||||||| | ||||||| |||| |||||||
Sbjct: 23806795 tcagttcagccatctgggagacgatggattccttctcctgctccagcctctccaacttct 23806854

                                                                            
Query: 398      tagccgcatcctctttcatctgctctagcctagtttccacatcgtccactggcatgtggg 457
                |||| |||||||||||||||||||| ||||| || |||||||| |||  |||||||||||
Sbjct: 23806855 tagctgcatcctctttcatctgctccagccttgtctccacatcatcccttggcatgtggg 23806914

                                                                            
Query: 458      caaacacttccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattcc 517
                |||||||||| ||||||||||| |||||||| | ||| || |||| ||||||||||||||
Sbjct: 23806915 caaacacttctccaatttggaaccgcaccacgtcttcgtctgacaggatgagttcattcc 23806974

                 
Query: 518      c 518
                |
Sbjct: 23806975 c 23806975
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  210 bits (106), Expect = 3e-51
 Identities = 207/241 (85%)
 Strand = Plus / Plus

                                                                            
Query: 278      ctcgacatcaatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttct 337
                ||||| || ||||||| |||||||||||||| ||    || || ||||| || |||||||
Sbjct: 23799823 ctcgatattaatcttcttccaggttgatggcgtccttgaactttccgtacagtatcttct 23799882

                                                                            
Query: 338      tcagttcggccatctgggcaaggatggattccttctcttcctccagcttctctaacttct 397
                ||||||| ||||||||||  | ||||||||||||||| | ||||||| |||| |||||||
Sbjct: 23799883 tcagttcagccatctgggagacgatggattccttctcctgctccagcctctccaacttct 23799942

                                                                            
Query: 398      tagccgcatcctctttcatctgctctagcctagtttccacatcgtccactggcatgtggg 457
                |||| |||||||||||||||||||| ||||| || |||||||| |||  |||||||||||
Sbjct: 23799943 tagctgcatcctctttcatctgctccagccttgtctccacatcatcccttggcatgtggg 23800002

                                                                            
Query: 458      caaacacttccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattcc 517
                |||||||||| ||||||||||| |||||||| | ||| || |||| ||||||||||||||
Sbjct: 23800003 caaacacttctccaatttggaaccgcaccacgtcttcgtctgacaggatgagttcattcc 23800062

                 
Query: 518      c 518
                |
Sbjct: 23800063 c 23800063
to top
>dbj|AK103619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L23, full
           insert sequence
          Length = 793

 Score =  210 bits (106), Expect = 3e-51
 Identities = 207/241 (85%)
 Strand = Plus / Minus

                                                                       
Query: 278 ctcgacatcaatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttct 337
           ||||| || ||||||| |||||||||||||| ||    || || ||||| || |||||||
Sbjct: 500 ctcgatattaatcttcttccaggttgatggcgtccttgaactttccgtacagtatcttct 441

                                                                       
Query: 338 tcagttcggccatctgggcaaggatggattccttctcttcctccagcttctctaacttct 397
           ||||||| ||||||||||  | ||||||||||||||| | ||||||| |||| |||||||
Sbjct: 440 tcagttcagccatctgggagacgatggattccttctcctgctccagcctctccaacttct 381

                                                                       
Query: 398 tagccgcatcctctttcatctgctctagcctagtttccacatcgtccactggcatgtggg 457
           |||| |||||||||||||||||||| ||||| || |||||||| |||  |||||||||||
Sbjct: 380 tagctgcatcctctttcatctgctccagccttgtctccacatcatcccttggcatgtggg 321

                                                                       
Query: 458 caaacacttccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattcc 517
           |||||||||| ||||||||||| |||||||| | ||| || |||| ||||||||||||||
Sbjct: 320 caaacacttctccaatttggaaccgcaccacgtcttcgtctgacaggatgagttcattcc 261

            
Query: 518 c 518
           |
Sbjct: 260 c 260
to top
>gb|BT017822.1| Zea mays clone EL01N0508B09.c mRNA sequence
          Length = 967

 Score =  192 bits (97), Expect = 8e-46
 Identities = 198/232 (85%)
 Strand = Plus / Minus

                                                                       
Query: 287 aatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttcttcagttcgg 346
           |||||||||||||||||||||| ||    || |||||||| || ||||||||||| ||||
Sbjct: 564 aatcttcctccaggttgatggcgtccttgaacttcccgtacagtatcttcttcagctcgg 505

                                                                       
Query: 347 ccatctgggcaaggatggattccttctcttcctccagcttctctaacttcttagccgcat 406
           |||||||||| |||| |||||||||||| ||||| ||| |||| | ||||||||||||||
Sbjct: 504 ccatctgggcgaggacggattccttctcctcctctagcctctccagcttcttagccgcat 445

                                                                       
Query: 407 cctctttcatctgctctagcctagtttccacatcgtccactggcatgtgggcaaacactt 466
           |||||||||||||||| |||||||| || || ||||||   |||||||| |||||||| |
Sbjct: 444 cctctttcatctgctccagcctagtctcgacgtcgtccctcggcatgtgagcaaacacct 385

                                                               
Query: 467 ccccaatttggaaacgcaccacatnttcatcagacaagatgagttcattccc 518
           |||| || ||||| ||||| |||| ||| || |||| ||||||||| |||||
Sbjct: 384 ccccgatctggaagcgcacgacatcttcgtccgacaggatgagttcgttccc 333
to top
>gb|AY110513.1| Zea mays CL5714_1 mRNA sequence
          Length = 698

 Score =  141 bits (71), Expect = 3e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                       
Query: 393 cttcttagccgcatcctctttcatctgctctagcctagtttccacatcgtccactggcat 452
           |||||||||||||||||||||||||||||| |||||||| || || || |||  ||||||
Sbjct: 397 cttcttagccgcatcctctttcatctgctccagcctagtctcgacgtcatcccttggcat 338

                                                                       
Query: 453 gtgggcaaacacttccccaatttggaaacgcaccacatnttcatcagacaagatgagttc 512
           ||| ||||||||||||||||||||||| || || || | |||||| ||||||||||||||
Sbjct: 337 gtgagcaaacacttccccaatttggaagcgtacaacgtcttcatccgacaagatgagttc 278

                 
Query: 513 attccc 518
           ||||||
Sbjct: 277 attccc 272



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 287 aatcttcctccaggttgatggcctctccaaatttcccgtagaggatcttcttcagttcgg 346
           |||||||||||||||||||||| ||    || |||||||| || ||||||||||| ||||
Sbjct: 503 aatcttcctccaggttgatggcatccttgaacttcccgtacagtatcttcttcagctcgg 444

                             
Query: 347 ccatctgggcaaggatgg 364
           |||||||||| |||||||
Sbjct: 443 ccatctgggccaggatgg 426
to top
>gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, complete sequence
          Length = 184961

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 366    ttccttctcttcctccagcttctc 389
              ||||||||||||||||||||||||
Sbjct: 114216 ttccttctcttcctccagcttctc 114239
to top
>ref|NM_020893.1| Homo sapiens KIAA1529 (KIAA1529), mRNA
          Length = 6269

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 367  tccttctcttcctccagcttctc 389
            |||||||||||||||||||||||
Sbjct: 3712 tccttctcttcctccagcttctc 3690
to top
>gb|BC047097.1| Homo sapiens KIAA1529, mRNA (cDNA clone IMAGE:5268490), partial cds
          Length = 2796

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 367  tccttctcttcctccagcttctc 389
            |||||||||||||||||||||||
Sbjct: 2431 tccttctcttcctccagcttctc 2409
to top
>gb|BC112930.1| Homo sapiens KIAA1529, mRNA (cDNA clone IMAGE:6473441), complete cds
          Length = 5610

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 367  tccttctcttcctccagcttctc 389
            |||||||||||||||||||||||
Sbjct: 2725 tccttctcttcctccagcttctc 2703
to top
>emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chromosome 9 Contains the 3'
             end of the gene for KIAA1529 protein, the 5' end of a gene
             for tudor repeat associator with PCTAIRE 2 (PCTAIRE2BP), a
             pseudogene similar to part of ral guanine nucleotide
             dissociation stimulator (RALGDS) and two CpG islands,
             complete sequence
          Length = 165432

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 367   tccttctcttcctccagcttctc 389
             |||||||||||||||||||||||
Sbjct: 51980 tccttctcttcctccagcttctc 51958
to top
>emb|CR749320.1| Homo sapiens mRNA; cDNA DKFZp686B2031 (from clone DKFZp686B2031)
          Length = 5232

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 367  tccttctcttcctccagcttctc 389
            |||||||||||||||||||||||
Sbjct: 2430 tccttctcttcctccagcttctc 2408
to top
>emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chromosome 1, complete
             sequence
          Length = 259487

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 366   ttccttctcttcctccagcttct 388
             |||||||||||||||||||||||
Sbjct: 19400 ttccttctcttcctccagcttct 19378
to top
>dbj|AB040962.1| Homo sapiens mRNA for KIAA1529 protein, partial cds
          Length = 6269

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 367  tccttctcttcctccagcttctc 389
            |||||||||||||||||||||||
Sbjct: 3712 tccttctcttcctccagcttctc 3690
to top
>emb|AL109627.18|HSJ733M16 Human DNA sequence from clone RP4-733M16 on chromosome 1p36.11-36.23
             Contains four novel genes, a novel gene (FLJ33962), a
             novel gene (MGC10731), the 3' end of a novel gene
             (KIAA1332), a  metallothionein family pseudogene and three
             CpG islands, complete sequence
          Length = 120825

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 104   ctctccccaggcttctgctgga 125
             ||||||||||||||||||||||
Sbjct: 72528 ctctccccaggcttctgctgga 72507
to top
>emb|AL606533.4| Mouse DNA sequence from clone RP23-312D21 on chromosome 13 Contains the
             5' end of the gene for a novel serine (or cysteine)
             proteinase inhibitor clade B (Serpinb) member, complete
             sequence
          Length = 51022

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 370   ttctcttcctccagcttctcta 391
             ||||||||||||||||||||||
Sbjct: 17955 ttctcttcctccagcttctcta 17976
to top
>gb|AC093925.5| Genomic sequence for Mus musculus, clone RP23-304H5, complete sequence
          Length = 227242

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 496    tcagacaagatgagttcattcc 517
              ||||||||||||||||||||||
Sbjct: 128035 tcagacaagatgagttcattcc 128014
to top
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence
          Length = 167215

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 367   tccttctcttcctccagcttc 387
             |||||||||||||||||||||
Sbjct: 55281 tccttctcttcctccagcttc 55301
to top
>gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, complete sequence
          Length = 227529

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 366    ttccttctcttcctccagcttctct 390
              |||||| ||||||||||||||||||
Sbjct: 197160 ttccttttcttcctccagcttctct 197184
to top
>gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete sequence
          Length = 127731

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 183  acaatcatcacgagaaacaatgtag 207
            ||||||||||| |||||||||||||
Sbjct: 8301 acaatcatcaccagaaacaatgtag 8325
to top
>ref|XM_786216.1| PREDICTED: Strongylocentrotus purpuratus similar to myomegalin
           (LOC586433), partial mRNA
          Length = 5273

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 366 ttccttctcttcctccagcttctct 390
           ||||||||||||||||| |||||||
Sbjct: 465 ttccttctcttcctccatcttctct 441
to top
>emb|BX323996.10| Zebrafish DNA sequence from clone CH211-12K10 in linkage group 17,
             complete sequence
          Length = 169351

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   ttctcttcctccagcttctct 390
             |||||||||||||||||||||
Sbjct: 37088 ttctcttcctccagcttctct 37068
to top
>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 340    agttcggccatctgggcaagg 360
              |||||||||||||||||||||
Sbjct: 156922 agttcggccatctgggcaagg 156902
to top
>gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomic scaffold
          Length = 211360

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   agttcggccatctgggcaagg 360
             |||||||||||||||||||||
Sbjct: 41967 agttcggccatctgggcaagg 41947
to top
>emb|BX005249.6| Zebrafish DNA sequence from clone CH211-188M4, complete sequence
          Length = 154305

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 403    gcatcctctttcatctgctct 423
              |||||||||||||||||||||
Sbjct: 125287 gcatcctctttcatctgctct 125307
to top
>gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, complete sequence
          Length = 182530

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 366   ttccttctcttcctccagcttctct 390
             |||||| ||||||||||||||||||
Sbjct: 38080 ttccttttcttcctccagcttctct 38104
to top
>ref|XM_359717.1| Magnaporthe grisea 70-15 hypothetical protein (MG05060.4) partial
            mRNA
          Length = 2610

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 326  agaggatcttcttcagttcggcca 349
            ||||||||||||||||| ||||||
Sbjct: 1132 agaggatcttcttcagtccggcca 1109
to top
>gb|AC091094.2| Felis catus clone RP86-317G18, complete sequence
          Length = 134762

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ctccccaggcttctgctgga 125
             ||||||||||||||||||||
Sbjct: 90191 ctccccaggcttctgctgga 90210
to top
>emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chromosome 13, complete
             sequence
          Length = 146127

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    ttggtttctcaagtgcccatttaa 98
             |||||||||||| |||||||||||
Sbjct: 82399 ttggtttctcaaatgcccatttaa 82422
to top
>emb|BX890550.10| Zebrafish DNA sequence from clone DKEYP-110B6 in linkage group 13,
            complete sequence
          Length = 174313

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 368  ccttctcttcctccagcttc 387
            ||||||||||||||||||||
Sbjct: 6305 ccttctcttcctccagcttc 6324
to top
>emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on chromosome 4, complete
             sequence
          Length = 211513

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   agcttctctaacttcttagc 401
             ||||||||||||||||||||
Sbjct: 17062 agcttctctaacttcttagc 17043
to top
>emb|AL627256.5| Zebrafish DNA sequence from clone RP71-1L10 in linkage group 8 Contains
              part of a gene for a novel peptide transporter, complete
              sequence
          Length = 169757

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    gagaagaacaaagcacctga 228
              ||||||||||||||||||||
Sbjct: 138290 gagaagaacaaagcacctga 138271
to top
>gb|AC090607.6| Homo sapiens chromosome 15, clone RP11-762H8, complete sequence
          Length = 156559

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   ctctccccaggcttctgctg 123
             ||||||||||||||||||||
Sbjct: 46173 ctctccccaggcttctgctg 46192
to top
>gb|AC099567.2| Homo sapiens chromosome 1 clone RP5-936J12, complete sequence
          Length = 171400

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     ctagcttaaaacattgtaaa 64
              ||||||||||||||||||||
Sbjct: 152435 ctagcttaaaacattgtaaa 152416
to top
>ref|XM_692898.1| PREDICTED: Danio rerio similar to vacuolar protein sorting 16 isoform
            1 (LOC569504), partial mRNA
          Length = 2113

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  ccttctcttcctccagcttc 387
            ||||||||||||||||||||
Sbjct: 2064 ccttctcttcctccagcttc 2045



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  ccttctcttcctccagcttc 387
            ||||||||||||||||||||
Sbjct: 1544 ccttctcttcctccagcttc 1525
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 380     ccagcttctctaacttcttagccg 403
               |||||| |||||||||||||||||
Sbjct: 6414845 ccagctgctctaacttcttagccg 6414822
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 380      ccagcttctctaacttcttagccg 403
                |||||| |||||||||||||||||
Sbjct: 17825389 ccagctgctctaacttcttagccg 17825366



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 210      agaagaacaaagcacctgaacaag 233
                ||||||||||||||||| ||||||
Sbjct: 17713350 agaagaacaaagcacctcaacaag 17713373
to top
>gb|AC142455.4| Mus musculus BAC clone RP23-179B15 from chromosome 14, complete sequence
          Length = 207514

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 367    tccttctcttcctccagcttctct 390
              |||||||||||||||| |||||||
Sbjct: 175312 tccttctcttcctccatcttctct 175289
to top
>gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-190J1, complete sequence
          Length = 203842

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   cttcctccagcttctctaac 393
             ||||||||||||||||||||
Sbjct: 93597 cttcctccagcttctctaac 93578
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   tcggccatctgggcaaggat 362
             ||||||||||||||||||||
Sbjct: 31686 tcggccatctgggcaaggat 31667
to top
>gb|AC153534.2| Mus musculus 10 BAC RP23-360K7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207306

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    gcaaggatggattccttctc 374
              ||||||||||||||||||||
Sbjct: 167653 gcaaggatggattccttctc 167634
to top
>gb|AC153863.6| Mus musculus 10 BAC RP23-149M7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203121

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   gcaaggatggattccttctc 374
             ||||||||||||||||||||
Sbjct: 95716 gcaaggatggattccttctc 95697
to top
>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0021C10
          Length = 119527

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   agaagaacaaagcacctgaacaag 233
             ||||||||||||||||| ||||||
Sbjct: 69364 agaagaacaaagcacctcaacaag 69387
to top
>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654A08
          Length = 154812

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 380   ccagcttctctaacttcttagccg 403
             |||||| |||||||||||||||||
Sbjct: 64920 ccagctgctctaacttcttagccg 64897
to top
>dbj|AP004649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1465_C11
          Length = 108091

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 380   ccagcttctctaacttcttagccg 403
             |||||| |||||||||||||||||
Sbjct: 76742 ccagctgctctaacttcttagccg 76719
to top
>gb|AC154598.2| Mus musculus BAC clone RP23-356P6 from 14, complete sequence
          Length = 206646

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 367   tccttctcttcctccagcttctct 390
             |||||||||||||||| |||||||
Sbjct: 53664 tccttctcttcctccatcttctct 53641
to top
>gb|AF101105.1|COL11A1G27 Homo sapiens collagen type XI alpha-1 (COL11A1) gene, exons 50
            through 54
          Length = 4467

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   ctagcttaaaacattgtaaa 64
            ||||||||||||||||||||
Sbjct: 4304 ctagcttaaaacattgtaaa 4323
to top
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete
             sequence
          Length = 191255

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   cttctcttcctccagcttct 388
             ||||||||||||||||||||
Sbjct: 68537 cttctcttcctccagcttct 68518
to top
>emb|AL840633.8| Mouse DNA sequence from clone RP23-290E9 on chromosome 2, complete
             sequence
          Length = 103842

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   gattccttctcttcctccag 383
             ||||||||||||||||||||
Sbjct: 34523 gattccttctcttcctccag 34504


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,685,114
Number of Sequences: 3902068
Number of extensions: 4685114
Number of successful extensions: 98934
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98673
Number of HSP's gapped (non-prelim): 252
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top