ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61o18 |
|---|---|
| Clone Library Name | barley_pub |
>WNT2_DROME (P28465) Protein Wnt-2 precursor (dWnt-2)| Length = 352 Score = 29.6 bits (65), Expect = 3.0 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +3 Query: 21 RLHKVYLQPTPYGEYMNNNITTGFSPLPSKFCSFVRLHTDNGI-SCHLLRACACGQSHPG 197 R+ +YL+ +P Y ++ TG + C T +G SC LL CG+ H Sbjct: 268 RMELIYLEASP--NYCERSLQTGSQGTSGRTCQ----RTGHGPQSCDLL---CCGRGHNT 318 Query: 198 SRLSHTIKCFC 230 + T +C C Sbjct: 319 QHIRRTTQCRC 329
>YFAS_ECOLI (P76464) Hypothetical UPF0192 protein yfaS precursor| Length = 1534 Score = 28.9 bits (63), Expect = 5.1 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 3 FIAQQ*RLHKVYLQPTPYGEYMNNNIT 83 F+ QQ LH++ +QP G+ +NN +T Sbjct: 104 FLRQQKNLHRIVVQPQYLGDGLNNTLT 130
>YFAS_ECO57 (Q8XE35) Hypothetical UPF0192 protein yfaS precursor| Length = 1534 Score = 28.9 bits (63), Expect = 5.1 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 3 FIAQQ*RLHKVYLQPTPYGEYMNNNIT 83 F+ QQ LH++ +QP G+ +NN +T Sbjct: 104 FLRQQKNLHRIVVQPQYLGDGLNNTLT 130
>GBB1_XENLA (P79959) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) (XGbeta1) Length = 340 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 117 Query: 355 D*IC 366 D IC Sbjct: 118 DNIC 121
>GBB1_BRARE (Q6PH57) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 340 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 117 Query: 355 D*IC 366 D IC Sbjct: 118 DNIC 121
>GBB1_RAT (P54311) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 339 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 57 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 116 Query: 355 D*IC 366 D IC Sbjct: 117 DNIC 120
>GBB1_PONPY (Q5R5W8) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 339 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 57 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 116 Query: 355 D*IC 366 D IC Sbjct: 117 DNIC 120
>GBB1_MOUSE (P62874) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 339 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 57 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 116 Query: 355 D*IC 366 D IC Sbjct: 117 DNIC 120
>GBB1_HUMAN (P62873) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 339 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 57 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 116 Query: 355 D*IC 366 D IC Sbjct: 117 DNIC 120
>GBB1_CRIGR (Q6TMK6) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 339 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 57 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 116 Query: 355 D*IC 366 D IC Sbjct: 117 DNIC 120
>GBB1_CANFA (P62872) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 339 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 57 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 116 Query: 355 D*IC 366 D IC Sbjct: 117 DNIC 120
>GBB1_BOVIN (P62871) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 1 (Transducin beta chain 1) Length = 339 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYY----RYV-IGAL 354 I A + T S + + K + D+Y K + I +R S +TC Y YV G L Sbjct: 57 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 116 Query: 355 D*IC 366 D IC Sbjct: 117 DNIC 120
>GBB3_RAT (P52287) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 3 (Transducin beta chain 3) Length = 340 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYYR-----YVIGAL 354 I A + T S + + K + DTY K + I +R S +TC Y G L Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGL 117 Query: 355 D*IC 366 D +C Sbjct: 118 DNMC 121
>GBB3_MOUSE (Q61011) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 3 (Transducin beta chain 3) Length = 340 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYYR-----YVIGAL 354 I A + T S + + K + DTY K + I +R S +TC Y G L Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGL 117 Query: 355 D*IC 366 D +C Sbjct: 118 DNMC 121
>GBB3_CANFA (P79147) Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta| subunit 3 (Transducin beta chain 3) Length = 340 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Frame = +1 Query: 190 IQAPGYRTRSNAFATVPANNKFSLKDTYFLRKGNGIYIRGSGFITCYYR-----YVIGAL 354 I A + T S + + K + DTY K + I +R S +TC Y G L Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGL 117 Query: 355 D*IC 366 D +C Sbjct: 118 DNMC 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,017,295 Number of Sequences: 219361 Number of extensions: 1206005 Number of successful extensions: 2654 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2600 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2649 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
