ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) g... 957 0.0
2gb|BT009116.1| Triticum aestivum clone wl1.pk0012.g10:fis, full ... 731 0.0
3emb|AJ292521.1|TAE292521 Triticum aestivum mRNA for starch synth... 731 0.0
4gb|AF091803.1|AF091803 Triticum aestivum starch synthase I mRNA,... 731 0.0
5gb|AF091802.1|AF091802 Aegilops tauschii starch synthase I gene,... 712 0.0
6emb|AJ292522.1|TAE292522 Triticum aestivum mRNA for starch synth... 509 e-141
7gb|U48227.1|TAU48227 Triticum aestivum soluble starch synthase m... 486 e-134
8gb|BT009026.1| Triticum aestivum clone wdk3c.pk019.f14:fis, full... 412 e-112
9emb|AJ635204.1| Triticum durum ssp. durum partial ss1 gene for p... 202 8e-49
10gb|BT018427.1| Zea mays clone EL01N0362G08.d mRNA sequence 113 6e-22
11gb|BT016354.1| Zea mays clone Contig187 mRNA sequence 113 6e-22
12gb|AF036891.2| Zea mays plastid starch synthase I precursor (Ss1... 113 6e-22
13gb|AY104834.1| Zea mays PCO152066 mRNA sequence 113 6e-22
14ref|XM_550329.1| Oryza sativa (japonica cultivar-group), mRNA 105 1e-19
15gb|AY299404.1| Oryza sativa (indica cultivar-group) soluble star... 105 1e-19
16dbj|AK109458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
17gb|AF165890.1|AF165890 Oryza sativa subsp. japonica soluble star... 103 6e-19
18dbj|D16202.1|RICSSS Oryza sativa mRNA for soluble starch synthas... 103 6e-19
19gb|AF168786.2|AF168786 Sorghum bicolor soluble starch synthase m... 96 1e-16
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
21dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
22dbj|D38221.1|RICE1 Rice gene for soluble starch synthase (SSS1),... 86 1e-13
23emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on ch... 44 0.44
24ref|XM_655790.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.8
25gb|AC090432.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 42 1.8
26emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chr... 42 1.8
27gb|AC006466.3|AC006466 Homo sapiens BAC clone CTA-471E18 from 7p... 42 1.8
28gb|AC092758.3| Papio anubis clone RP41-22J16, complete sequence 42 1.8
29ref|NM_208434.1| Eremothecium gossypii ABR134Cp (ABR134C), mRNA 42 1.8
30dbj|AB220949.1| Sphingomonas sp. KA1 plasmid pCAR3 carAaII, carB... 42 1.8
31gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.8
32dbj|AB065700.1| Homo sapiens gene for seven transmembrane helix ... 42 1.8
33gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosom... 40 6.9
34gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.9
35gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.9
36gb|AE006840.1| Sulfolobus solfataricus P2 section 199 of 272 of ... 40 6.9
37gb|AC125190.4| Mus musculus BAC clone RP23-288O24 from chromosom... 40 6.9
38gb|AC132586.3| Mus musculus BAC clone RP24-364D22 from chromosom... 40 6.9
39emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 o... 40 6.9
40emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.9
41gb|AC010798.9| Homo sapiens, clone RP11-470B24, complete sequence 40 6.9
42gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, com... 40 6.9
43gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor ... 40 6.9
44gb|AC158628.7| Mus musculus 6 BAC RP23-147K11 (Roswell Park Canc... 40 6.9
45gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosom... 40 6.9
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
47gb|AC158665.3| Mus musculus 6 BAC RP23-102M16 (Roswell Park Canc... 40 6.9
48dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
49dbj|AB094078.1| Silene latifolia DNA, CCLS96.1 homolog and ScD05... 40 6.9
50gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, co... 40 6.9
51emb|AL731839.13| Mouse DNA sequence from clone RP23-76O22 on chr... 40 6.9 
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds
          Length = 8387

 Score =  957 bits (483), Expect = 0.0
 Identities = 493/495 (99%), Gaps = 1/495 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8017 ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 7958

                                                                        
Query: 61   ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7957 ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 7898

                                                                        
Query: 121  caaaactgtaactgtcatccacccgaagctgccgcggcagcgctgcgaccgtcgtctact 180
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7897 caaaactgtaactgtcatccacccgaagctgccgcggcagcgttgcgaccgtcgtctact 7838

                                                                        
Query: 181  ctcgaaccggcgaaccaagcaagcaagcgcattgcgactctactgtagcaggacaacgca 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7837 ctcgaaccggcgaaccaagcaagcaagcgcattgcgactctactgtagcaggacaacgca 7778

                                                                        
Query: 241  atgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcagagctc 300
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7777 atgtacaggggtatcctccttcc-ggccgcggaaggatgaggaacatgtcttcagagctc 7719

                                                                        
Query: 301  aaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtccacg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7718 aaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtccacg 7659

                                                                        
Query: 361  aaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtctttc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7658 aaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtctttc 7599

                                                                        
Query: 421  gtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaaatc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7598 gtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaaatc 7539

                           
Query: 481  gcggttcgcaatgcc 495
            |||||||||||||||
Sbjct: 7538 gcggttcgcaatgcc 7524



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 494  cccacaacattttttccacg 513
            ||||||||||||||||||||
Sbjct: 7223 cccacaacattttttccacg 7204
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>gb|BT009116.1| Triticum aestivum clone wl1.pk0012.g10:fis, full insert mRNA
           sequence
          Length = 802

 Score =  731 bits (369), Expect = 0.0
 Identities = 481/516 (93%), Gaps = 8/516 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
           |||||||||||||| ||||||||||||||||||||||||||||||||  ||  |||||||
Sbjct: 699 ctaaggctaaagagtcaccagttggtttctgatttcagctgtaacacggac--agagagg 642

                                                                       
Query: 61  ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 120
           |||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 641 ctgccatctgagtggtgctttgctgttaaccatcctgcagcacatcccttccttattccc 582

                                                                       
Query: 121 caaaactgtaactgtcatccacccgaagctg---ccgcggcagcgctgcgaccgtcgtct 177
           |||||||||||||||||||||||||||||||   |||| |||||    |  ||||| |||
Sbjct: 581 caaaactgtaactgtcatccacccgaagctgtcaccgccgcagcagcacagccgtcatct 522

                                                                       
Query: 178 actctcgaaccggcgaaccaagcaagcaagcgcattgcgactctactgtagcaggacaac 237
           ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 521 actctcgaaccggcggaccaagcaagcaggcgcattgcgactctactgtagcaggacaac 462

                                                                       
Query: 238 gcaatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcagag 297
           ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcaatgtacaggggtatcct---tccgggccgcggaaggatgaggaacatgtcttcagag 405

                                                                       
Query: 298 ctcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtcc 357
           |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 404 ctcaaggagacccgcgcttcgacctccccagtccccgtctacatgacgtagggttggtcc 345

                                                                       
Query: 358 acgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 417
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 acgaaggcccattcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 285

                                                                       
Query: 418 ttcgtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaa 477
           ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| 
Sbjct: 284 ttcgtcatgcctcgcttcatgagcccctcccaggacggcttgtgctccctgaatgtcgac 225

                                               
Query: 478 atcgcggttcgcaatgcccacaacattttttccacg 513
           |||||||||||||||||||||||||| || ||||||
Sbjct: 224 atcgcggttcgcaatgcccacaacatcttgtccacg 189
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>emb|AJ292521.1|TAE292521 Triticum aestivum mRNA for starch synthase I-1 (wSsI-1 gene)
          Length = 2575

 Score =  731 bits (369), Expect = 0.0
 Identities = 481/516 (93%), Gaps = 8/516 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
            |||||||||||||| ||||||||||||||||||||||||||||||||  ||  |||||||
Sbjct: 2499 ctaaggctaaagagtcaccagttggtttctgatttcagctgtaacacggac--agagagg 2442

                                                                        
Query: 61   ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 120
            |||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 2441 ctgccatctgagtggtgctttgctgttaaccatcctgcagcacatcccttccttattccc 2382

                                                                        
Query: 121  caaaactgtaactgtcatccacccgaagctg---ccgcggcagcgctgcgaccgtcgtct 177
            |||||||||||||||||||||||||||||||   |||| |||||    |  ||||| |||
Sbjct: 2381 caaaactgtaactgtcatccacccgaagctgtcaccgccgcagcagcacagccgtcatct 2322

                                                                        
Query: 178  actctcgaaccggcgaaccaagcaagcaagcgcattgcgactctactgtagcaggacaac 237
            ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2321 actctcgaaccggcggaccaagcaagcaggcgcattgcgactctactgtagcaggacaac 2262

                                                                        
Query: 238  gcaatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcagag 297
            ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 2261 gcaatgtacaggggtatcct---tccgggccgcggaaggatgaggaacatgtcttcagag 2205

                                                                        
Query: 298  ctcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtcc 357
            |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2204 ctcaaggagacccgcgcttcgacctccccagtccccgtctacatgacgtagggttggtcc 2145

                                                                        
Query: 358  acgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 417
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2144 acgaaggcccattcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 2085

                                                                        
Query: 418  ttcgtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaa 477
            ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| 
Sbjct: 2084 ttcgtcatgcctcgcttcatgagcccctcccaggacggcttgtgctccctgaatgtcgac 2025

                                                
Query: 478  atcgcggttcgcaatgcccacaacattttttccacg 513
            |||||||||||||||||||||||||| || ||||||
Sbjct: 2024 atcgcggttcgcaatgcccacaacatcttgtccacg 1989
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>gb|AF091803.1|AF091803 Triticum aestivum starch synthase I mRNA, complete cds
          Length = 2591

 Score =  731 bits (369), Expect = 0.0
 Identities = 481/516 (93%), Gaps = 8/516 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
            |||||||||||||| ||||||||||||||||||||||||||||||||  ||  |||||||
Sbjct: 2532 ctaaggctaaagagtcaccagttggtttctgatttcagctgtaacacggac--agagagg 2475

                                                                        
Query: 61   ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 120
            |||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 2474 ctgccatctgagtggtgctttgctgttaaccatcctgcagcacatcccttccttattccc 2415

                                                                        
Query: 121  caaaactgtaactgtcatccacccgaagctg---ccgcggcagcgctgcgaccgtcgtct 177
            |||||||||||||||||||||||||||||||   |||| |||||    |  ||||| |||
Sbjct: 2414 caaaactgtaactgtcatccacccgaagctgtcaccgccgcagcagcacagccgtcatct 2355

                                                                        
Query: 178  actctcgaaccggcgaaccaagcaagcaagcgcattgcgactctactgtagcaggacaac 237
            ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2354 actctcgaaccggcggaccaagcaagcaggcgcattgcgactctactgtagcaggacaac 2295

                                                                        
Query: 238  gcaatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcagag 297
            ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 2294 gcaatgtacaggggtatcct---tccgggccgcggaaggatgaggaacatgtcttcagag 2238

                                                                        
Query: 298  ctcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtcc 357
            |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2237 ctcaaggagacccgcgcttcgacctccccagtccccgtctacatgacgtagggttggtcc 2178

                                                                        
Query: 358  acgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 417
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 acgaaggcccattcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 2118

                                                                        
Query: 418  ttcgtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaa 477
            ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| 
Sbjct: 2117 ttcgtcatgcctcgcttcatgagcccctcccaggacggcttgtgctccctgaatgtcgac 2058

                                                
Query: 478  atcgcggttcgcaatgcccacaacattttttccacg 513
            |||||||||||||||||||||||||| || ||||||
Sbjct: 2057 atcgcggttcgcaatgcccacaacatcttgtccacg 2022
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>gb|AF091802.1|AF091802 Aegilops tauschii starch synthase I gene, complete cds
          Length = 11387

 Score =  712 bits (359), Expect = 0.0
 Identities = 465/498 (93%), Gaps = 8/498 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
             |||||||||||||| ||||||||||||||||||||||||||||||||  ||  |||||||
Sbjct: 10990 ctaaggctaaagagtcaccagttggtttctgatttcagctgtaacacggac--agagagg 10933

                                                                         
Query: 61    ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 120
             |||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 10932 ctgccatctgagtggtgctttgctgttaaccatcctgcagcacatcccttccttattccc 10873

                                                                         
Query: 121   caaaactgtaactgtcatccacccgaagctg---ccgcggcagcgctgcgaccgtcgtct 177
             |||||||||||||||||||||||||||||||   |||| |||||    |  ||||| |||
Sbjct: 10872 caaaactgtaactgtcatccacccgaagctgtcaccgccgcagcagcacagccgtcatct 10813

                                                                         
Query: 178   actctcgaaccggcgaaccaagcaagcaagcgcattgcgactctactgtagcaggacaac 237
             ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 10812 actctcgaaccggcggaccaagcaagcaggcgcattgcgactctactgtagcaggacaac 10753

                                                                         
Query: 238   gcaatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcagag 297
             ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 10752 gcaatgtacaggggtatcct---tccgggccgcggaaggatgaggaacatgtcttcagag 10696

                                                                         
Query: 298   ctcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtcc 357
             |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10695 ctcaaggagacccgcgcttcgacctccccagtccccgtctacatgacgtagggttggtcc 10636

                                                                         
Query: 358   acgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 417
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10635 acgaaggcccattcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtct 10576

                                                                         
Query: 418   ttcgtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaa 477
             ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| 
Sbjct: 10575 ttcgtcatgcctcgcttcatgagcccctcccaggacggcttgtgctccctgaatgtcgac 10516

                               
Query: 478   atcgcggttcgcaatgcc 495
             ||||||||||||||||||
Sbjct: 10515 atcgcggttcgcaatgcc 10498
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>emb|AJ292522.1|TAE292522 Triticum aestivum mRNA for starch synthase I-2 (wSsI-2 gene)
          Length = 2421

 Score =  509 bits (257), Expect = e-141
 Identities = 317/335 (94%), Gaps = 4/335 (1%)
 Strand = Plus / Minus

                                                                        
Query: 180  tctcgaaccggcgaaccaa-gcaagcaagcgcattgcgactctactgtagcaggacaacg 238
            ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2224 tctcgaaccggcgaaccaaagcaagcaggcgcattgcgactctactgtagcaggacaacg 2165

                                                                        
Query: 239  caatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcagagc 298
            |||||||||||||||||||   |||||||||||||||||||| ||  |||||||||||||
Sbjct: 2164 caatgtacaggggtatcct---tccgggccgcggaaggatgaagaggatgtcttcagagc 2108

                                                                        
Query: 299  tcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtcca 358
            ||||||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2107 tcaaggagactcgcacttggacctccccagtccccgtctacatgacgtagggttggtcca 2048

                                                                        
Query: 359  cgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtctt 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2047 cgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtctt 1988

                                                                        
Query: 419  tcgtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaaa 478
            |||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 1987 tcgtcatgcctcgcttcatgagcccctcccaggacggcttgtgctccctgaatgtcgaca 1928

                                               
Query: 479  tcgcggttcgcaatgcccacaacattttttccacg 513
            ||||||||||||||||||||||||| || ||||||
Sbjct: 1927 tcgcggttcgcaatgcccacaacatcttgtccacg 1893



 Score =  206 bits (104), Expect = 5e-50
 Identities = 140/151 (92%), Gaps = 2/151 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
            |||||||||||||| ||||||||||||||||||||||||||||||||  ||  |||||||
Sbjct: 2404 ctaaggctaaagagtcaccagttggtttctgatttcagctgtaacacggac--agagagg 2347

                                                                        
Query: 61   ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 120
            |||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 2346 ctgccatctgagtggtgctttgctgttaaccatcctgcagcacatcccttccttattccc 2287

                                           
Query: 121  caaaactgtaactgtcatccacccgaagctg 151
            | |||||||||||||| ||||||||||||||
Sbjct: 2286 ccaaactgtaactgtcgtccacccgaagctg 2256
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>gb|U48227.1|TAU48227 Triticum aestivum soluble starch synthase mRNA, partial cds
          Length = 2055

 Score =  486 bits (245), Expect = e-134
 Identities = 315/335 (94%), Gaps = 5/335 (1%)
 Strand = Plus / Minus

                                                                        
Query: 180  tctcgaaccggcgaaccaa-gcaagcaagcgcattgcgactctactgtagcaggacaacg 238
            ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1660 tctcgaaccggcgaaccaaagcaagcaggcgcattgcgactctactgtagcaggacaacg 1601

                                                                        
Query: 239  caatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcagagc 298
            |||||||||||||||||||   |||||||||||||||||||| ||  |||||||||||||
Sbjct: 1600 caatgtacaggggtatcct---tccgggccgcggaaggatgaagaggatgtcttcagagc 1544

                                                                        
Query: 299  tcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggtcca 358
            | ||||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1543 tgaaggagactcgcacttggacctccccagtccccgtctacatgacgtagggttggtcca 1484

                                                                        
Query: 359  cgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggtctt 418
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1483 cgaaggcccactcgaagatctgctcgtactgctcgg-ggcatggtcccacgtatggtctt 1425

                                                                        
Query: 419  tcgtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcgaaa 478
            |||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 1424 tcgtcatgcctcgcttcatgagcccctcccaggacggcttgtgctccctgaatgtcgaca 1365

                                               
Query: 479  tcgcggttcgcaatgcccacaacattttttccacg 513
            ||||||||||||||||||||||||| || ||||||
Sbjct: 1364 tcgcggttcgcaatgcccacaacatcttgtccacg 1330



 Score =  214 bits (108), Expect = 2e-52
 Identities = 141/151 (93%), Gaps = 2/151 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
            |||||||||||||| ||||||||||||||||||||||||||||||||  ||  |||||||
Sbjct: 1840 ctaaggctaaagagtcaccagttggtttctgatttcagctgtaacacggac--agagagg 1783

                                                                        
Query: 61   ctgccgactgagtggtgctttgctgtcaaccatcctgcagcacctcccttccttattccc 120
            |||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 1782 ctgccatctgagtggtgctttgctgttaaccatcctgcagcacatcccttccttattccc 1723

                                           
Query: 121  caaaactgtaactgtcatccacccgaagctg 151
            |||||||||||||||| ||||||||||||||
Sbjct: 1722 caaaactgtaactgtcgtccacccgaagctg 1692
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>gb|BT009026.1| Triticum aestivum clone wdk3c.pk019.f14:fis, full insert mRNA
            sequence
          Length = 1431

 Score =  412 bits (208), Expect = e-112
 Identities = 261/278 (93%), Gaps = 3/278 (1%)
 Strand = Plus / Minus

                                                                        
Query: 236  acgcaatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcag 295
            ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |
Sbjct: 1086 acgcaatgtacaggggtatcct---tccgggccgcggaaggatgaggaacatgtcttctg 1030

                                                                        
Query: 296  agctcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggt 355
            ||||||||||||||| ||||||||||||||||||||| ||||||||||| || || ||||
Sbjct: 1029 agctcaaggagactgccgcttcgacctccccagtccccgtctacatgacatatggctggt 970

                                                                        
Query: 356  ccacgaaggcccactcgaagatctgctcgtactgctcggcggcatggtcccacgtatggt 415
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969  ccacgaaggcccattcgaagatctgctcgtactgctcggcggcatggtcccacgtatggt 910

                                                                        
Query: 416  ctttcgtcatgcctcgcttcatgagcccctcccaggagggcttgtgctccctaaacgtcg 475
            |||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 909  cttttgtcatgcctcgcttcatgagcccctcccaggacggcttgtgctccctgaatgtcg 850

                                                  
Query: 476  aaatcgcggttcgcaatgcccacaacattttttccacg 513
            | |||||||||||||||||||||||||| || ||||||
Sbjct: 849  acatcgcggttcgcaatgcccacaacatcttgtccacg 812



 Score =  168 bits (85), Expect = 1e-38
 Identities = 138/152 (90%), Gaps = 4/152 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
            |||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||  |
Sbjct: 1327 ctaaggctaaagagtcaccagttggtttcagatttcagctgtaacacggaccgagag--g 1270

                                                                        
Query: 61   ctgccgactgagtggtgctttgctgtcaaccat-cctgcagcacctcccttccttattcc 119
            |||||  |||||||   ||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 1269 ctgccagctgagtgcaactttgctgttaaccattcctgcagcacc-cccttccttattcc 1211

                                            
Query: 120  ccaaaactgtaactgtcatccacccgaagctg 151
            ||||||||||||||||||||||||||||||||
Sbjct: 1210 ccaaaactgtaactgtcatccacccgaagctg 1179



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 177  tactctcgaaccggcgaaccaagcaagcaagcgcattgc 215
            ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1150 tactctcgaaccggcgaaccaagcaagcaggcgcattgc 1112
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>emb|AJ635204.1| Triticum durum ssp. durum partial ss1 gene for putative soluble
           starch synthase, genomic RNA
          Length = 442

 Score =  202 bits (102), Expect = 8e-49
 Identities = 141/152 (92%), Gaps = 4/152 (2%)
 Strand = Plus / Minus

                                                                       
Query: 236 acgcaatgtacaggggtatcctccttccgggccgcggaaggatgaggaacatgtcttcag 295
           ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |
Sbjct: 149 acgcaatgtacaggggtatcct---tccgggccgcggaaggatgaggaacatgtcttctg 93

                                                                       
Query: 296 agctcaaggagactggcgcttcgacctccccagtcccagtctacatgacgtagggttggt 355
           ||||||||||||||| ||||||||||||||||||||| ||||||||||| || || ||||
Sbjct: 92  agctcaaggagactgccgcttcgacctccccagtccctgtctacatgacatatggctggt 33

                                           
Query: 356 ccacgaaggcccactc-gaagatctgctcgta 386
           ||||||||||||| || |||||||||||||||
Sbjct: 32  ccacgaaggcccattcggaagatctgctcgta 1



 Score =  168 bits (85), Expect = 1e-38
 Identities = 138/152 (90%), Gaps = 4/152 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctaaggctaaagagacaccagttggtttctgatttcagctgtaacacccaccgagagagg 60
           |||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||  |
Sbjct: 390 ctaaggctaaagagtcaccagttggtttcagatttcagctgtaacacggaccgagag--g 333

                                                                       
Query: 61  ctgccgactgagtggtgctttgctgtcaaccat-cctgcagcacctcccttccttattcc 119
           |||||  |||||||   ||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 332 ctgccagctgagtgcaactttgctgttaaccattcctgcagcacc-cccttccttattcc 274

                                           
Query: 120 ccaaaactgtaactgtcatccacccgaagctg 151
           ||||||||||||||||||||||||||||||||
Sbjct: 273 ccaaaactgtaactgtcatccacccgaagctg 242



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                  
Query: 177 tactctcgaaccggcgaaccaagcaagcaagcgcattgc 215
           ||||||||||||||||||||||||||||| |||||||||
Sbjct: 213 tactctcgaaccggcgaaccaagcaagcaggcgcattgc 175
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>gb|BT018427.1| Zea mays clone EL01N0362G08.d mRNA sequence
          Length = 1802

 Score =  113 bits (57), Expect = 6e-22
 Identities = 144/173 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| |||||| | || | ||||||||||| |||||| || ||||| || || |||
Sbjct: 1383 tacatgacatagggtcgatcgatgaaggcccactggaagatttgttcgtattgttcagcg 1324

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||||||   |||||| | ||||||||||||||| ||||| |||||||||| |
Sbjct: 1323 gcatggtcccacgtgaagtcttttgacatgcctcgcttcattagcccttcccaggaggac 1264

                                                                 
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacattttttc 509
            ||||| |||||  | || || || || |||||||||| ||||||||| |||||
Sbjct: 1263 ttgtgttccctgtatgtagatattgcagttcgcaatgtccacaacatgttttc 1211
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>gb|BT016354.1| Zea mays clone Contig187 mRNA sequence
          Length = 938

 Score =  113 bits (57), Expect = 6e-22
 Identities = 144/173 (83%)
 Strand = Plus / Minus

                                                                       
Query: 337 tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
           |||||||| |||||| | || | ||||||||||| |||||| || ||||| || || |||
Sbjct: 539 tacatgacatagggtcgatcgatgaaggcccactggaagatttgttcgtattgttcagcg 480

                                                                       
Query: 397 gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
           ||||||||||||||   |||||| | ||||||||||||||| ||||| |||||||||| |
Sbjct: 479 gcatggtcccacgtgaagtcttttgacatgcctcgcttcattagcccttcccaggaggac 420

                                                                
Query: 457 ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacattttttc 509
           ||||| |||||  | || || || || |||||||||| ||||||||| |||||
Sbjct: 419 ttgtgttccctgtatgtagatattgcagttcgcaatgtccacaacatgttttc 367
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>gb|AF036891.2| Zea mays plastid starch synthase I precursor (Ss1) mRNA, complete
            cds; nuclear gene for plastid product
          Length = 2357

 Score =  113 bits (57), Expect = 6e-22
 Identities = 144/173 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| |||||| | || | ||||||||||| |||||| || ||||| || || |||
Sbjct: 1976 tacatgacatagggtcgatcgatgaaggcccactggaagatttgttcgtattgttcagcg 1917

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||||||   |||||| | ||||||||||||||| ||||| |||||||||| |
Sbjct: 1916 gcatggtcccacgtgaagtcttttgacatgcctcgcttcattagcccttcccaggaggac 1857

                                                                 
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacattttttc 509
            ||||| |||||  | || || || || |||||||||| ||||||||| |||||
Sbjct: 1856 ttgtgttccctgtatgtagatattgcagttcgcaatgtccacaacatgttttc 1804
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>gb|AY104834.1| Zea mays PCO152066 mRNA sequence
          Length = 1530

 Score =  113 bits (57), Expect = 6e-22
 Identities = 144/173 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| |||||| | || | ||||||||||| |||||| || ||||| || || |||
Sbjct: 1149 tacatgacatagggtcgatcgatgaaggcccactggaagatttgttcgtattgttcagcg 1090

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||||||   |||||| | ||||||||||||||| ||||| |||||||||| |
Sbjct: 1089 gcatggtcccacgtgaagtcttttgacatgcctcgcttcattagcccttcccaggaggac 1030

                                                                 
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacattttttc 509
            ||||| |||||  | || || || || |||||||||| ||||||||| |||||
Sbjct: 1029 ttgtgttccctgtatgtagatattgcagttcgcaatgtccacaacatgttttc 977
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>ref|XM_550329.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2623

 Score =  105 bits (53), Expect = 1e-19
 Identities = 143/173 (82%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 2117 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 2058

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 2057 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 1998

                                                                 
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacattttttc 509
            ||||| |||||  | |||||||| ||  | ||||||||||||| |||||||||
Sbjct: 1997 ttgtgttccctgtatgtcgaaattgccatccgcaatgcccacagcattttttc 1945
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>gb|AY299404.1| Oryza sativa (indica cultivar-group) soluble starch synthase I
            precursor, mRNA, complete cds
          Length = 2547

 Score =  105 bits (53), Expect = 1e-19
 Identities = 143/173 (82%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 2021 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 1962

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 1961 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 1902

                                                                 
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacattttttc 509
            ||||| |||||  | |||||||| ||  | ||||||||||||| |||||||||
Sbjct: 1901 ttgtgttccctgtatgtcgaaattgccatccgcaatgcccacagcattttttc 1849
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>dbj|AK109458.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C03, full
            insert sequence
          Length = 2623

 Score =  105 bits (53), Expect = 1e-19
 Identities = 143/173 (82%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 2117 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 2058

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 2057 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 1998

                                                                 
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacattttttc 509
            ||||| |||||  | |||||||| ||  | ||||||||||||| |||||||||
Sbjct: 1997 ttgtgttccctgtatgtcgaaattgccatccgcaatgcccacagcattttttc 1945
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>gb|AF165890.1|AF165890 Oryza sativa subsp. japonica soluble starch synthase mRNA, complete
            cds
          Length = 2585

 Score =  103 bits (52), Expect = 6e-19
 Identities = 142/172 (82%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 2064 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 2005

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 2004 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 1945

                                                                
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacatttttt 508
            ||||| |||||  | |||||||| ||  | ||||||||||||| ||||||||
Sbjct: 1944 ttgtgttccctgtatgtcgaaattgccatccgcaatgcccacagcatttttt 1893
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>dbj|D16202.1|RICSSS Oryza sativa mRNA for soluble starch synthase, complete cds
          Length = 2533

 Score =  103 bits (52), Expect = 6e-19
 Identities = 142/172 (82%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 2039 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 1980

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 1979 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 1920

                                                                
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaacatttttt 508
            ||||| |||||  | |||||||| ||  | ||||||||||||| ||||||||
Sbjct: 1919 ttgtgttccctgtatgtcgaaattgccatccgcaatgcccacagcatttttt 1868
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>gb|AF168786.2|AF168786 Sorghum bicolor soluble starch synthase mRNA, complete cds
          Length = 2592

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 135/164 (82%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| |||||| | || | ||||||||||| |||||| || ||||| || || |||
Sbjct: 2002 tacatgacatagggtcgatcgatgaaggcccactggaagatttgttcgtattgttcagcg 1943

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||||||   |||||| | |||||| | |||||||||||| |||||||| |  
Sbjct: 1942 gcatggtcccacgtgaagtcttttgacatgcccctcttcatgagcccttcccaggaagat 1883

                                                        
Query: 457  ttgtgctccctaaacgtcgaaatcgcggttcgcaatgcccacaa 500
            ||||||||| |  | |||||||| || |||||||||| ||||||
Sbjct: 1882 ttgtgctccttgtatgtcgaaattgcagttcgcaatgtccacaa 1839
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                           
Query: 337     tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
               |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 3078794 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 3078853

                                                                           
Query: 397     gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
               ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 3078854 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 3078913

                          
Query: 457     ttgtgctccct 467
               ||||| |||||
Sbjct: 3078914 ttgtgttccct 3078924
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>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0681F10
          Length = 170371

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                         
Query: 337   tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
             |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 32979 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 33038

                                                                         
Query: 397   gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
             ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 33039 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 33098

                        
Query: 457   ttgtgctccct 467
             ||||| |||||
Sbjct: 33099 ttgtgttccct 33109
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>dbj|D38221.1|RICE1 Rice gene for soluble starch synthase (SSS1), complete cds (exon1-15)
          Length = 8900

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  tacatgacgtagggttggtccacgaaggcccactcgaagatctgctcgtactgctcggcg 396
            |||||||| || ||||| |||| ||||||||| ||||||||||| || |||||   ||||
Sbjct: 8161 tacatgacatatggttgatccatgaaggcccattcgaagatctgttcatactgtgaggcg 8102

                                                                        
Query: 397  gcatggtcccacgtatggtctttcgtcatgcctcgcttcatgagcccctcccaggagggc 456
            ||||||||||| |||  |||  | | ||||||||||||||| || |||||||| |||| |
Sbjct: 8101 gcatggtcccatgtaaagtcgcttgacatgcctcgcttcattagaccctcccaagaggac 8042

                       
Query: 457  ttgtgctccct 467
            ||||| |||||
Sbjct: 8041 ttgtgttccct 8031
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>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete
             sequence
          Length = 193813

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 301   aaggagactggcgcttcgacctcccc 326
             ||||||||||| ||||||||||||||
Sbjct: 23232 aaggagactggggcttcgacctcccc 23257
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>ref|XM_655790.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3278.2), mRNA
          Length = 1365

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 384 gtactgctcggcggcatggtc 404
           |||||||||||||||||||||
Sbjct: 555 gtactgctcggcggcatggtc 535
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>gb|AC090432.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-454P8, complete
             sequence
          Length = 148344

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    gttggtttctgatttcagctg 41
             |||||||||||||||||||||
Sbjct: 46707 gttggtttctgatttcagctg 46727
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>emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chromosome 11 Contains a
            PDZ domain containing guanine (Pdzgef1) pseudogene, a
            tubulin alpha 4 (Tuba4) pseudogene , an olfactory
            receptor pseudogene, a novel pseudogene and the 3' end of
            a novel gene, complete sequence
          Length = 108424

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 103  cctcccttccttattccccaa 123
            |||||||||||||||||||||
Sbjct: 4045 cctcccttccttattccccaa 4065
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>gb|AC006466.3|AC006466 Homo sapiens BAC clone CTA-471E18 from 7p11.2-p21, complete sequence
          Length = 156880

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   cacctcccttccttattcccc 121
             |||||||||||||||||||||
Sbjct: 22657 cacctcccttccttattcccc 22637
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>gb|AC092758.3| Papio anubis clone RP41-22J16, complete sequence
          Length = 171690

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   cacctcccttccttattcccc 121
             |||||||||||||||||||||
Sbjct: 22838 cacctcccttccttattcccc 22818
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>ref|NM_208434.1| Eremothecium gossypii ABR134Cp (ABR134C), mRNA
          Length = 2931

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 137 atccacccgaagctgccgcggcagc 161
           ||||||||||||| |||||||||||
Sbjct: 643 atccacccgaagcggccgcggcagc 619
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>dbj|AB220949.1| Sphingomonas sp. KA1 plasmid pCAR3 carAaII, carBaII, carBbII, carCII,
            carAcII, carRII, tnpR, tnpA genes for terminal oxygenase
            component of carbazole 1,9a-dioxygenase, subunit of meta
            cleavage enzyme, subunit of meta cleavage enzyme, meta
            cleavage compound hydrolase, ferredoxin component of
            carbazole 1,9a-dioxygenase, transcriptional regulator of
            car operon, resolvase, transposase, complete cds
          Length = 6383

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 348  gggttggtccacgaaggcccactcg 372
            |||||||||||||||||||| ||||
Sbjct: 5850 gggttggtccacgaaggcccgctcg 5826
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 137    atccacccgaagctgccgcggcagc 161
              ||||||||||||| |||||||||||
Sbjct: 647468 atccacccgaagcggccgcggcagc 647492
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>dbj|AB065700.1| Homo sapiens gene for seven transmembrane helix receptor, complete
           cds, isolate:CBRC7TM_263
          Length = 43818

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 101 cacctcccttccttattcccc 121
           |||||||||||||||||||||
Sbjct: 70  cacctcccttccttattcccc 50
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>gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosome 14, complete sequence
          Length = 215802

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     ttggtttctgatttcagctg 41
              ||||||||||||||||||||
Sbjct: 124642 ttggtttctgatttcagctg 124661
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>gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-258F1, complete
              sequence
          Length = 118461

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ttggtttctgatttcagctg 41
              ||||||||||||||||||||
Sbjct: 106121 ttggtttctgatttcagctg 106102
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>gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-253G12, complete
             sequence
          Length = 199642

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ttggtttctgatttcagctg 41
             ||||||||||||||||||||
Sbjct: 10991 ttggtttctgatttcagctg 10972
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>gb|AE006840.1| Sulfolobus solfataricus P2 section 199 of 272 of the complete genome
          Length = 12983

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   gtttctgatttcagctgtaa 44
            ||||||||||||||||||||
Sbjct: 7855 gtttctgatttcagctgtaa 7836
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>gb|AC125190.4| Mus musculus BAC clone RP23-288O24 from chromosome 13, complete
             sequence
          Length = 152080

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ttggtttctgatttcagctg 41
             ||||||||||||||||||||
Sbjct: 46224 ttggtttctgatttcagctg 46243
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>gb|AC132586.3| Mus musculus BAC clone RP24-364D22 from chromosome 7, complete sequence
          Length = 136155

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ttggtttctgatttcagctg 41
             ||||||||||||||||||||
Sbjct: 73158 ttggtttctgatttcagctg 73139
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>emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 on chromosome 6p11.2-12.3
             Contains part of the COL21A1 gene for collagen, type XXI,
             alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L,
             COL20A1, DKFZp564B052), complete sequence
          Length = 126501

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   cccaaaactgtaactgtcatccac 142
             |||||||||||| |||||||||||
Sbjct: 34226 cccaaaactgtatctgtcatccac 34203
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     gcagcgctgcgaccgtcgtc 176
               ||||||||||||||||||||
Sbjct: 1614664 gcagcgctgcgaccgtcgtc 1614683
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>gb|AC010798.9| Homo sapiens, clone RP11-470B24, complete sequence
          Length = 176148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    tccccaaaactgtaactgtcatcc 140
              ||||| ||||||||||||||||||
Sbjct: 131183 tcccctaaactgtaactgtcatcc 131206
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>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence
          Length = 203375

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    tgagcccctcccaggagggc 456
              ||||||||||||||||||||
Sbjct: 111111 tgagcccctcccaggagggc 111092
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>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete
              cds, alternatively spliced
          Length = 381696

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 119    cccaaaactgtaactgtcatccac 142
              |||||||||||| |||||||||||
Sbjct: 243096 cccaaaactgtatctgtcatccac 243119
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>gb|AC158628.7| Mus musculus 6 BAC RP23-147K11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188746

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    tccccagtcccagtctacat 341
              ||||||||||||||||||||
Sbjct: 114974 tccccagtcccagtctacat 114955
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>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete
             sequence
          Length = 189102

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   gcacctcccttccttattcc 119
             ||||||||||||||||||||
Sbjct: 86864 gcacctcccttccttattcc 86845
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      gagagaggctgccgactgag 72
               ||||||||||||||||||||
Sbjct: 8040772 gagagaggctgccgactgag 8040753
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>gb|AC158665.3| Mus musculus 6 BAC RP23-102M16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207904

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   tccccagtcccagtctacat 341
             ||||||||||||||||||||
Sbjct: 11411 tccccagtcccagtctacat 11392
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>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1341_A08
          Length = 128955

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    gagagaggctgccgactgag 72
             ||||||||||||||||||||
Sbjct: 78969 gagagaggctgccgactgag 78950
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>dbj|AB094078.1| Silene latifolia DNA, CCLS96.1 homolog and ScD05 homolog
          Length = 7800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 294  agagctcaaggagactggcgcttc 317
            |||||||||||||| |||||||||
Sbjct: 6662 agagctcaaggagattggcgcttc 6685
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>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence
          Length = 136530

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ttggtttctgatttcagctg 41
             ||||||||||||||||||||
Sbjct: 95720 ttggtttctgatttcagctg 95701
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>emb|AL731839.13| Mouse DNA sequence from clone RP23-76O22 on chromosome X, complete
              sequence
          Length = 228355

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    agcccctcccaggagggctt 458
              ||||||||||||||||||||
Sbjct: 195234 agcccctcccaggagggctt 195253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,513,708
Number of Sequences: 3902068
Number of extensions: 3513708
Number of successful extensions: 66276
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66075
Number of HSP's gapped (non-prelim): 170
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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