ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61p16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg1 region, genomic sequence Length = 3124 Score = 153 bits (77), Expect = 8e-34 Identities = 142/162 (87%), Gaps = 5/162 (3%) Strand = Plus / Minus Query: 43 tacaatacatacaattatcatgtagaagagcagggtacgactacggacgaaatcaaacga 102 |||| |||||||||| |||| ||||||||||||| |||||||| |||||| ||||||| Sbjct: 2361 tacattacatacaatcgccatgaagaagagcagggtccgactacgaacgaaaacaaacga 2302 Query: 103 taaaagaacgacgtccatccttgctatcacaggttgtcggcctgaaacccatcctagacc 162 |||||||||||||||||||||||||||| |||| || || |||| ||||||||||||| | Sbjct: 2301 taaaagaacgacgtccatccttgctatcccaggctgccgacctggaacccatcctagatc 2242 Query: 163 gatgaag----aagaagaagaaactccaaatagaacaatcat 200 || |||| |||||||||||||||||||| |||||||||| Sbjct: 2241 gacgaagaagaaagaagaagaaactccaaat-gaacaatcat 2201 Score = 113 bits (57), Expect = 7e-22 Identities = 88/97 (90%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 ||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||| ||| | Sbjct: 865 ctgagatcctgcttggaagaagaacgaatccgtgaagcagacgaaccaacgtagccgaac 806 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || ||||||||||| |||||||||||| ||||||||| Sbjct: 805 ggttcctcacattccgacacgcttgcgaaactctatc 769
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 139 bits (70), Expect = 1e-29 Identities = 105/116 (90%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 68217 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 68276 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 68277 gctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 68332 Score = 93.7 bits (47), Expect = 6e-16 Identities = 85/95 (89%), Gaps = 2/95 (2%) Strand = Plus / Plus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||| | Sbjct: 69688 ctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaac 69747 Query: 300 ggatcctcacattctgacacgcttgcggaactcta 334 || |||||||| || | ||||| |||||||||||| Sbjct: 69748 gggtcctcacaatccggcacgc-tgcggaactcta 69781
>emb|Z17327.1|HVBARE1 H.vulgare DNA for BARE-1 copia-like retroelement Length = 13271 Score = 139 bits (70), Expect = 1e-29 Identities = 105/116 (90%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 10487 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 10428 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 10427 gctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 10372
>dbj|AB014756.1| Hordeum vulgare insertion sequence in a copia-like retroelement BARE-1, gypsy-type retrotransposon BARE-100 DNA, solo-LTR sequence Length = 3130 Score = 139 bits (70), Expect = 1e-29 Identities = 105/116 (90%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 2930 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 2871 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 2870 gctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 2815
>gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long terminal repeat, partial and complete sequences Length = 11820 Score = 135 bits (68), Expect = 2e-28 Identities = 105/117 (89%), Gaps = 4/117 (3%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaa----gaacgacgtccatcct 123 ||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||| Sbjct: 11665 aagagcagggtccgactacggacgaaaacaaacgagaaaaataagaacgacgtccatcct 11606 Query: 124 tgctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 ||||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 11605 tgctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 11549 Score = 131 bits (66), Expect = 3e-27 Identities = 104/116 (89%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||| ||||||||| Sbjct: 4127 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacatccatcctt 4068 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 4067 gctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 4012 Score = 105 bits (53), Expect = 2e-19 Identities = 87/97 (89%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||| | Sbjct: 2655 ctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaac 2596 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 | |||||||| || | |||||||||||||||||||| Sbjct: 2595 gagtcctcacaatccggcacgcttgcggaactctatc 2559 Score = 71.9 bits (36), Expect = 2e-09 Identities = 83/96 (86%), Gaps = 2/96 (2%) Strand = Plus / Minus Query: 242 tgagatcccgcttggaagaagaacgactccgtgaagcagacggacca-cgtagtcgagcg 300 |||||||||||||||||||||||| |||| ||| || | | |||| ||||||||| || Sbjct: 10185 tgagatcccgcttggaagaagaacaactcggtggagtcggcaaaccatcgtagtcgaacg 10126 Query: 301 gatcctcacattctgacacgcttgcggaactctatc 336 | ||||||| ||| |||||||||||||||||||||| Sbjct: 10125 ggtcctcac-ttccgacacgcttgcggaactctatc 10091
>gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposon, partial sequence Length = 7674 Score = 133 bits (67), Expect = 7e-28 Identities = 102/113 (90%), Gaps = 3/113 (2%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttgct 127 ||||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct: 4121 aagagcagggtccgactacggacgaaaacaaacgagaaaa---cgacgtccatccttgct 4065 Query: 128 atcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 ||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 4064 atcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 4012 Score = 105 bits (53), Expect = 2e-19 Identities = 87/97 (89%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||| | Sbjct: 2655 ctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaac 2596 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 | |||||||| || | |||||||||||||||||||| Sbjct: 2595 gagtcctcacaatccggcacgcttgcggaactctatc 2559
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 131 bits (66), Expect = 3e-27 Identities = 104/116 (89%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| || |||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 64913 aagagcagggtccgtctacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 64972 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 64973 gctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 65028 Score = 105 bits (53), Expect = 2e-19 Identities = 88/97 (90%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 ||||||||| |||||||||||||| | |||||||||||||||| ||| |||||||||| | Sbjct: 66389 ctgagatcctgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaac 66448 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || |||||||| || |||||||||||||||||||||| Sbjct: 66449 gggtcctcaca-tccgacacgcttgcggaactctatc 66484
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 131 bits (66), Expect = 3e-27 Identities = 104/116 (89%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||| ||||||| ||||||| ||||||| |||||||||||||| Sbjct: 16443 aagagcagggtccgactacagacgaaaacaaacgacaaaagaagaacgacgtccatcctt 16502 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 16503 gctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 16558 Score = 73.8 bits (37), Expect = 6e-10 Identities = 84/97 (86%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | || |||||||| |||| ||| |||||||||| | Sbjct: 17918 ctgagatcccgcttggaagaagaatgcctgcgtgaagctgacgaaccgacgtagtcgaac 17977 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || |||||||| || | ||||| | |||||||||||| Sbjct: 17978 gggtcctcacaatccggcacgc-tccggaactctatc 18013
>gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotransposon long terminal repeat, complete sequence Length = 7575 Score = 131 bits (66), Expect = 3e-27 Identities = 104/116 (89%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||| ||||||||| Sbjct: 4127 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacatccatcctt 4068 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 4067 gctatcccaggctgccggcctggaacccatcctagatcgatgaagaagaagaagaa 4012 Score = 105 bits (53), Expect = 2e-19 Identities = 87/97 (89%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||| | Sbjct: 2655 ctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaac 2596 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 | |||||||| || | |||||||||||||||||||| Sbjct: 2595 gagtcctcacaatccggcacgcttgcggaactctatc 2559
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 131 bits (66), Expect = 3e-27 Identities = 104/116 (89%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 11006 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 10947 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| ||| || ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 10946 gctatccgagggtgccggcctggaacccatcctagatcgatgaagaagaagaagaa 10891 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/97 (89%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||| ||| | |||||||||||||||| ||| |||||||||| | Sbjct: 9538 ctgagatcccgcttggaagaggaatgcctccgtgaagcagacgaaccgacgtagtcgaac 9479 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || |||||||| || ||||||||||| |||||||||| Sbjct: 9478 gggtcctcaca-tccgacacgcttgcagaactctatc 9443
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 123 bits (62), Expect = 7e-25 Identities = 103/116 (88%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 102845 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 102904 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| |||||| || ||||||||| Sbjct: 102905 gctatcccaggctgccggcctggaacccatcctagatcgatgatgatgaagaagaa 102960 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/97 (89%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||| | Sbjct: 104340 ctgagatcccgcctggaagaagaacaactccgtgaagcagacgaaccgacgtagtcgaac 104399 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || |||||||| || | ||||| |||||||||||||| Sbjct: 104400 gggtcctcacaatccggcacgc-tgcggaactctatc 104435
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 123 bits (62), Expect = 7e-25 Identities = 103/116 (88%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 327093 aagagcagggtccgactacggacgaaaacaaacgagaaaagaagaacgacgtccatcctt 327034 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||||||| ||||||||||||| |||||| ||||||| |||| Sbjct: 327033 gctatcccaggctgccggcctggaacccatcctagatcgatgatgaagaaggagaa 326978 Score = 119 bits (60), Expect = 1e-23 Identities = 131/152 (86%), Gaps = 7/152 (4%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| |||||||||| |||| ||||||| ||||||| |||||||||||||| Sbjct: 131493 aagagcagggtccgactacggaagaaaacaaacgagaaaagaagaacgacgtccatcctt 131434 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatga---agaagaagaagaaa 181 |||||| |||| || || |||| ||||||||||||| |||||| ||||||||||| || Sbjct: 131433 gctatcccaggctgccgccctggaacccatcctagatcgatgaaggagaagaagaagcaa 131374 Query: 182 ctccaaatagaacaatcattgtgctcacgtca 213 |||||||| ||||||||| | |||||||||| Sbjct: 131373 ctccaaat-gaacaatcaacgcgctcacgtca 131343 Score = 113 bits (57), Expect = 7e-22 Identities = 88/97 (90%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacca-cgtagtcgagc 299 |||||||||| |||||||||||||| ||||||||||| ||||| |||| ||||||||| | Sbjct: 325599 ctgagatcccacttggaagaagaacaactccgtgaagtagacgaaccaacgtagtcgaac 325540 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || ||||||||||| |||||||||||| ||||||||| Sbjct: 325539 gggtcctcacattccgacacgcttgcgaaactctatc 325503 Score = 89.7 bits (45), Expect = 1e-14 Identities = 80/89 (89%), Gaps = 2/89 (2%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||||| ||| ||| |||||||||| | Sbjct: 130044 ctgagatcccgcttggaagaagaatgtctccgtgaagcacacgaaccgacgtagtcgaac 129985 Query: 300 ggatcctcacattctgacacgcttgcgga 328 || |||||||| || |||||||||||||| Sbjct: 129984 gggtcctcaca-tccgacacgcttgcgga 129957 Score = 73.8 bits (37), Expect = 6e-10 Identities = 78/89 (87%), Gaps = 2/89 (2%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||| | ||| ||| |||||||||| Sbjct: 177377 ctgagatcccgcttggaagaagaatgtctccgtgaagaacacgaaccgacgtagtcgaat 177318 Query: 300 ggatcctcacattctgacacgcttgcgga 328 || |||||||| || |||||||||||||| Sbjct: 177317 gggtcctcaca-tccgacacgcttgcgga 177290
>gb|AY187024.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT4 gene, complete cds Length = 6561 Score = 115 bits (58), Expect = 2e-22 Identities = 102/116 (87%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaa---cgacgtccatcctt 124 ||||||||||| ||||||||||||||| ||| ||| ||||||| |||||||||||||| Sbjct: 2615 aagagcagggtccgactacggacgaaaacaaccgagaaaagaagaacgacgtccatcctt 2674 Query: 125 gctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 |||||| |||| || ||| ||| ||||||||||||| |||||||||||||||||| Sbjct: 2675 gctatcccaggctgccggtctggaacccatcctagattgatgaagaagaagaagaa 2730 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 gaagaagaagaagaaactccaaata 190 ||||||||||||| ||||||||||| Sbjct: 2749 gaagaagaagaagcaactccaaata 2773
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 113 bits (57), Expect = 7e-22 Identities = 89/97 (91%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||| | Sbjct: 4859 ctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaac 4918 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || |||||||| || |||||||||||||||||||||| Sbjct: 4919 gggtcctcaca-tccgacacgcttgcggaactctatc 4954 Score = 101 bits (51), Expect = 3e-18 Identities = 102/117 (87%), Gaps = 4/117 (3%) Strand = Plus / Plus Query: 68 aagagcagggtacgactacggacg-aaatcaaacgataa---aagaacgacgtccatcct 123 ||||||||||| |||||| ||| | ||| ||||||| || |||||||||||||||||| Sbjct: 3382 aagagcagggtccgactatggatgaaaaacaaacgacaaaagaagaacgacgtccatcct 3441 Query: 124 tgctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 ||||||| |||| || ||||||| ||||||||||||| ||| ||||||||||||||| Sbjct: 3442 tgctatcccaggctgccggcctggaacccatcctagatcgaagaagaagaagaagaa 3498 Score = 79.8 bits (40), Expect = 9e-12 Identities = 69/78 (88%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 106 aagaacgacgtccatccttgctatcacaggttgtcggcctgaaacccatcctagaccgat 165 ||||||||||||||||||||||||| |||| || ||||||| ||||||||||||| ||| Sbjct: 3424 aagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcgaa 3483 Query: 166 gaagaagaag---aagaa 180 |||||||||| ||||| Sbjct: 3484 gaagaagaagaagaagaa 3501
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 113 bits (57), Expect = 7e-22 Identities = 88/97 (90%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggac-cacgtagtcgagc 299 |||||||||||||||||||||||| | |||||||||||||||| || |||||||||| | Sbjct: 38836 ctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaactgacgtagtcgaac 38895 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || |||||||| || |||||||||||||||||||||| Sbjct: 38896 gggtcctcacaatccgacacgcttgcggaactctatc 38932 Score = 111 bits (56), Expect = 3e-21 Identities = 101/115 (87%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaag--aacgacgtccatccttg 125 |||||| |||| ||||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct: 37353 aagagcggggtccgactacggacgaaaacaaacgagaaaatgaaacgacgtccatccttg 37412 Query: 126 ctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 ||||| |||| || ||||||| ||||||||||||| |||||||||| ||| |||| Sbjct: 37413 ctatcccaggctgccggcctggaacccatcctagatcgatgaagaaaaaggagaa 37467
>gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rpg1 region, genomic sequence Length = 7321 Score = 113 bits (57), Expect = 7e-22 Identities = 88/97 (90%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 ||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||| ||| | Sbjct: 6094 ctgagatcctgcttggaagaagaacgaatccgtgaagcagacgaaccaacgtagccgaac 6035 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 || ||||||||||| |||||||||||| ||||||||| Sbjct: 6034 ggttcctcacattccgacacgcttgcgaaactctatc 5998
>gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7731 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/115 (86%), Gaps = 4/115 (3%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||||| |||||||||| || ||| |||||||||| Sbjct: 4232 agaagagcagggtccgactacggacgaaaacaaacgataa---aatgacatccatccttg 4176 Query: 126 ctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 ||||| |||| || | ||||| ||||||||||| | ||| ||||||||||||||| Sbjct: 4175 ctatcccaggctg-ccgcctggaacccatcctatatcgaagaagaagaagaagaa 4122 Score = 73.8 bits (37), Expect = 6e-10 Identities = 84/97 (86%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacg-gaccacgtagtcgagc 299 ||||||||||||||||||||||||||| ||||||||| ||||| | | || ||||||| | Sbjct: 2787 ctgagatcccgcttggaagaagaacgaatccgtgaagaagacgagccaacatagtcgaac 2728 Query: 300 ggatcctcacattctgacacgcttgcggaactctatc 336 | ||||||||| || || || ||| |||||||||||| Sbjct: 2727 gaatcctcacactccga-actctttcggaactctatc 2692
>gb|AF453663.1| Hordeum patagonicum isolate HPA2 Sukkula retrotransposon, partial sequence Length = 3862 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/92 (85%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 44 acaatacatacaattatcatgtagaagagcagggtacgactacggacgaaatcaaacgat 103 |||| |||| |||| ||||| ||||||||||||| ||||||| ||||||| |||||||| Sbjct: 93 acaacacattcaatcatcatacagaagagcagggtccgactacagacgaaaacaaacgat 34 Query: 104 aaaagaacgacgtccatccttgctatcacagg 135 || |||||| ||||||||||||||| |||| Sbjct: 33 aa---aacgacatccatccttgctatcccagg 5
>gb|AF453667.1| Hordeum patagonicum isolate HPA1 Sukkula retrotransposon, partial sequence Length = 3698 Score = 73.8 bits (37), Expect = 6e-10 Identities = 78/91 (85%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 45 caatacatacaattatcatgtagaagagcagggtacgactacggacgaaatcaaacgata 104 ||||| ||||||| ||||| ||||||||||||| || |||||||||||| ||||||||| Sbjct: 92 caatatatacaatcatcatacagaagagcagggtccggctacggacgaaaacaaacgata 33 Query: 105 aaagaacgacgtccatccttgctatcacagg 135 | ||| || ||||||||||||||| |||| Sbjct: 32 a---aacaacatccatccttgctatcccagg 5
>gb|AF453670.1| Hordeum roshevitzii isolate Hroshevitzii Sukkula retrotransposon, partial sequence Length = 3434 Score = 71.9 bits (36), Expect = 2e-09 Identities = 62/70 (88%), Gaps = 3/70 (4%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||||| |||||||||| || ||| |||||||||| Sbjct: 71 agaagagcagggtccgactacggacgaaaacaaacgataa---aatgacatccatccttg 15 Query: 126 ctatcacagg 135 ||||| |||| Sbjct: 14 ctatcccagg 5
>gb|AF453662.1| Elymus repens isolate Ely3 Sukkula retrotransposon, partial sequence Length = 3622 Score = 71.9 bits (36), Expect = 2e-09 Identities = 62/70 (88%), Gaps = 3/70 (4%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||||| |||||||||| || ||| |||||||||| Sbjct: 71 agaagagcagggtccgactacggacgaaaacaaacgataa---aatgacatccatccttg 15 Query: 126 ctatcacagg 135 ||||| |||| Sbjct: 14 ctatcccagg 5
>gb|AF453658.1| Elymus repens isolate Ely1 Sukkula retrotransposon, partial sequence Length = 3613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 62/70 (88%), Gaps = 3/70 (4%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||||| |||||||||| || ||| |||||||||| Sbjct: 71 agaagagcagggtccgactacggacgaaaacaaacgataa---aatgacatccatccttg 15 Query: 126 ctatcacagg 135 ||||| |||| Sbjct: 14 ctatcccagg 5
>gb|AY054378.1| Hordeum vulgare clone HmaLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7919 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/113 (84%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 68 aagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttgct 127 ||||||||||| ||||||||||||||||||||| |||| || ||| |||||||||||| Sbjct: 4342 aagagcagggtccgactacggacgaaatcaaacaataa---aatgacatccatccttgct 4286 Query: 128 atcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 ||| ||| || | |||| || |||||||| | |||||||||||||||||| Sbjct: 4285 atcctaggctg-ccgcctagaatccatcctaaattgatgaagaagaagaagaa 4234 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaag 277 ||||||||||||| ||||||||||||| ||| ||||| Sbjct: 2873 ctgagatcccgctcggaagaagaacgattccatgaag 2837
>gb|AF453666.1| Hordeum patagonicum isolate HPA5 Sukkula retrotransposon, partial sequence Length = 3804 Score = 65.9 bits (33), Expect = 1e-07 Identities = 71/83 (85%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 53 acaattatcatgtagaagagcagggtacgactacggacgaaatcaaacgataaaagaacg 112 ||||| ||||| ||||||||||||| || |||||||||||| |||||||||| ||| Sbjct: 84 acaatcatcatacagaagagcagggtccggctacggacgaaaacaaacgataa---aaca 28 Query: 113 acgtccatccttgctatcacagg 135 || ||||||||||||||| |||| Sbjct: 27 acatccatccttgctatcccagg 5
>gb|AF453664.1| Hordeum patagonicum isolate Hpa3 Sukkula retrotransposon, partial sequence Length = 3943 Score = 65.9 bits (33), Expect = 1e-07 Identities = 71/83 (85%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 53 acaattatcatgtagaagagcagggtacgactacggacgaaatcaaacgataaaagaacg 112 ||||| ||||| ||||||||||||| || |||||||||||| |||||||||| ||| Sbjct: 84 acaatcatcatacagaagagcagggtccggctacggacgaaaacaaacgataa---aaca 28 Query: 113 acgtccatccttgctatcacagg 135 || ||||||||||||||| |||| Sbjct: 27 acatccatccttgctatcccagg 5
>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7586 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/115 (83%), Gaps = 4/115 (3%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 4033 agaagagcagggtctaactacggacgaaaacaaacgataaaat---gacacccatccttg 3977 Query: 126 ctatcacaggttgtcggcctgaaacccatcctagaccgatgaagaagaagaagaa 180 ||||| |||| || || |||| |||||||||| || | | ||||||||||||||| Sbjct: 3976 ctatcccaggctgccg-cctggaacccatcctggatcaaagaagaagaagaagaa 3923 Score = 65.9 bits (33), Expect = 1e-07 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 243 gagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagcgg 301 ||||||||||||||||||||||||| |||||||| | ||| ||| |||||||||| || Sbjct: 2583 gagatcccgcttggaagaagaacgaaaccgtgaagtaaacgaaccaacgtagtcgaacga 2524 Query: 302 atcctcaca 310 ||||||||| Sbjct: 2523 atcctcaca 2515
>gb|AF453660.1| Hordeum euclaston isolate He1 Sukkula retrotransposon, partial sequence Length = 3764 Score = 63.9 bits (32), Expect = 6e-07 Identities = 61/70 (87%), Gaps = 3/70 (4%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||||| |||| ||||| || ||| |||||||||| Sbjct: 71 agaagagcagggtccgactacggacgaaaacaaatgataa---aatgacatccatccttg 15 Query: 126 ctatcacagg 135 ||||| |||| Sbjct: 14 ctatcccagg 5
>gb|AF453659.1| Hordeum euclaston isolate He3 Sukkula retrotransposon, partial sequence Length = 3774 Score = 63.9 bits (32), Expect = 6e-07 Identities = 61/70 (87%), Gaps = 3/70 (4%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||||| |||| ||||| || ||| |||||||||| Sbjct: 71 agaagagcagggtccgactacggacgaaaacaaatgataa---aatgacatccatccttg 15 Query: 126 ctatcacagg 135 ||||| |||| Sbjct: 14 ctatcccagg 5
>gb|AY069967.1| Hordeum erectifolium clone hele412 retrotransposon sukkula, complete sequence Length = 3695 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/70 (85%), Gaps = 3/70 (4%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| | |||||||||||| |||||||||| || ||| |||||||||| Sbjct: 71 agaagagcagggtccatctacggacgaaaacaaacgataa---aatgacatccatccttg 15 Query: 126 ctatcacagg 135 ||||| |||| Sbjct: 14 ctatcccagg 5
>gb|AY069966.1| Hordeum erectifolium clone hele410 retrotransposon sukkula, complete sequence Length = 3683 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/70 (85%), Gaps = 3/70 (4%) Strand = Plus / Minus Query: 66 agaagagcagggtacgactacggacgaaatcaaacgataaaagaacgacgtccatccttg 125 ||||||||||||| ||||||||||||||| ||| ||||| || ||| |||||||||| Sbjct: 71 agaagagcagggtccgactacggacgaaaaaaaatgataa---aatgacatccatccttg 15 Query: 126 ctatcacagg 135 ||||| |||| Sbjct: 14 ctatcccagg 5
>ref|XM_712010.1| Candida albicans SC5314 hypothetical protein (CaO19_5299), mRNA Length = 594 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 166 gaagaagaagaagaaactccaaata 190 ||||||||||||||||||||||||| Sbjct: 520 gaagaagaagaagaaactccaaata 544
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaaat 189 |||||||||||||||||||||||| Sbjct: 12956679 gaagaagaagaagaaactccaaat 12956656
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaaat 189 |||||||||||||||||||||||| Sbjct: 12953454 gaagaagaagaagaaactccaaat 12953431
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaaat 189 |||||||||||||||||||||||| Sbjct: 34377 gaagaagaagaagaaactccaaat 34354
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 46.1 bits (23), Expect = 0.13 Identities = 60/71 (84%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 241 ctgagatcccgcttggaagaagaacgactccgtgaagcagacggacc-acgtagtcgagc 299 |||| ||||||| ||||||||||||| ||| ||||| |||| || |||||||||| | Sbjct: 194904 ctgaaatcccgcaaggaagaagaacgagtccatgaagtagacaaacggacgtagtcgaac 194963 Query: 300 ggatcctcaca 310 ||||||||||| Sbjct: 194964 ggatcctcaca 194974
>gb|BC108012.1| Danio rerio cDNA clone IMAGE:7899324 Length = 1518 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 gaccgatgaagaagaagaagaa 180 |||||||||||||||||||||| Sbjct: 679 gaccgatgaagaagaagaagaa 700
>ref|XM_711515.1| Candida albicans SC5314 ubiquitin-specific protease (CaO19_7367), mRNA Length = 2415 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 accgatgaagaagaagaagaaa 181 |||||||||||||||||||||| Sbjct: 2059 accgatgaagaagaagaagaaa 2080
>gb|BC116590.1| Danio rerio cDNA clone IMAGE:7263037 Length = 1344 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 gaccgatgaagaagaagaagaa 180 |||||||||||||||||||||| Sbjct: 505 gaccgatgaagaagaagaagaa 526
>gb|AF016685.1| Caenorhabditis elegans cosmid F59E11, complete sequence Length = 38181 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 177 agaaactccaaatagaacaatcattg 202 ||||||| |||||||||||||||||| Sbjct: 33955 agaaactgcaaatagaacaatcattg 33980
>gb|U50300.1| Caenorhabditis elegans cosmid R03H4, complete sequence Length = 24384 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 177 agaaactccaaatagaacaatcattg 202 ||||||| |||||||||||||||||| Sbjct: 324 agaaactgcaaatagaacaatcattg 349
>emb|AL121868.11|HSA541I12 Human DNA sequence from clone RP11-541I12 on chromosome Xq22.1-22.3, complete sequence Length = 118269 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 519 agaggaagaaggagcagggcat 540 |||||||||||||||||||||| Sbjct: 40771 agaggaagaaggagcagggcat 40792
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 53 acaattatcatgtagaagagcagggtacgactacggacgaaatcaaacga 102 ||||| ||||| ||| |||||||| | |||||||| | |||||||||||| Sbjct: 10969 acaatcatcatataggagagcaggatccgactacgaatgaaatcaaacga 11018
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 53 acaattatcatgtagaagagcagggtacgactacggacgaaatcaaacga 102 ||||| ||||| ||| |||||||| | |||||||| | |||||||||||| Sbjct: 10433 acaatcatcatataggagagcaggatccgactacgaatgaaatcaaacga 10482
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 53 acaattatcatgtagaagagcagggtacgactacggacgaaatcaaacga 102 ||||| ||||| ||| |||||||| | |||||||| | |||||||||||| Sbjct: 10954 acaatcatcatataggagagcaggatccgactacgaatgaaatcaaacga 11003
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 53 acaattatcatgtagaagagcagggtacgactacggacgaaatcaaacga 102 ||||| ||||| ||| |||||||| | |||||||| | |||||||||||| Sbjct: 77505 acaatcatcatataggagagcaggatccgactacgaatgaaatcaaacga 77554
>gb|AC156801.2| Mus musculus BAC clone RP23-142F22 from chromosome 9, complete sequence Length = 197974 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaa 187 |||||||||||||||||||||| Sbjct: 176751 gaagaagaagaagaaactccaa 176730
>ref|NM_072926.2| Caenorhabditis elegans F59E11.2 (F59E11.2) mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 177 agaaactccaaatagaacaatcattg 202 ||||||| |||||||||||||||||| Sbjct: 624 agaaactgcaaatagaacaatcattg 649
>emb|BX828313.1|CNS0A2ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1865 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaa 187 |||||||||||||||||||||| Sbjct: 64 gaagaagaagaagaaactccaa 43
>gb|AC112687.20| Mus musculus chromosome 9, clone RP23-230A14, complete sequence Length = 189775 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaa 187 |||||||||||||||||||||| Sbjct: 4032 gaagaagaagaagaaactccaa 4011
>ref|NM_126491.2| Arabidopsis thaliana cation transporter/ efflux permease AT2G04620 mRNA, complete cds Length = 2397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 agaagaagaaactccaaatag 191 ||||||||||||||||||||| Sbjct: 892 agaagaagaaactccaaatag 872
>gb|BC116622.1| Mus musculus CEA-related cell adhesion molecule 9, mRNA (cDNA clone IMAGE:40046369), partial cds Length = 747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 665 agatgacagggagacaggaagaagg 641
>gb|AC183324.3| Myotis lucifugus clone CH235-22K20, complete sequence Length = 198971 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 tcagagggaaagcaggggagg 500 ||||||||||||||||||||| Sbjct: 44756 tcagagggaaagcaggggagg 44736
>gb|BC010788.1| Mus musculus RIKEN cDNA 2700055K07 gene, mRNA (cDNA clone MGC:18840 IMAGE:4216285), complete cds Length = 1059 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 830 agatgacagggagacaggaagaagg 806
>ref|NM_026481.2| Mus musculus RIKEN cDNA 2700055K07 gene (2700055K07Rik), mRNA Length = 1059 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 830 agatgacagggagacaggaagaagg 806
>ref|XM_705047.1| Candida albicans SC5314 hypothetical protein (CaO19.8532), mRNA Length = 330 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 gatgaagaagaagaagaaact 183 ||||||||||||||||||||| Sbjct: 186 gatgaagaagaagaagaaact 166
>ref|XM_705044.1| Candida albicans SC5314 hypothetical protein (CaO19.917), mRNA Length = 330 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 gatgaagaagaagaagaaact 183 ||||||||||||||||||||| Sbjct: 186 gatgaagaagaagaagaaact 166
>gb|AC126265.3| Mus musculus BAC clone RP23-383O12 from chromosome 16, complete sequence Length = 186172 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 aaagcaggggagggagcaaga 508 ||||||||||||||||||||| Sbjct: 135968 aaagcaggggagggagcaaga 135948
>emb|AL450284.6| Human DNA sequence from clone RP11-555L24 on chromosome 1 Contains part of the DISC1 gene for disrupted in schizophrenia 1, complete sequence Length = 66208 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 aagaaactccaaatagaacaatcat 200 |||||||| |||||||||||||||| Sbjct: 21865 aagaaactacaaatagaacaatcat 21841
>emb|AL033501.1|CAC41C10 C.albicans cosmid Ca41C10 Length = 38874 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 cgatgaagaagaagaagaaac 182 ||||||||||||||||||||| Sbjct: 5714 cgatgaagaagaagaagaaac 5694
>emb|AJ851421.1| Gallus gallus mRNA for hypothetical protein, clone 2g8 Length = 5219 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 ggaagaaggagcagggcatga 542 ||||||||||||||||||||| Sbjct: 2553 ggaagaaggagcagggcatga 2573
>ref|NM_001012918.1| Gallus gallus serine/threonine kinase 11 interacting protein (STK11IP), mRNA Length = 5219 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 ggaagaaggagcagggcatga 542 ||||||||||||||||||||| Sbjct: 2553 ggaagaaggagcagggcatga 2573
>emb|BX119918.18| Zebrafish DNA sequence from clone CH211-202H22 in linkage group 1, complete sequence Length = 141342 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaact 183 ||||||||||||||||||||| Sbjct: 88193 gatgaagaagaagaagaaact 88213
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 27081 agatgacagggagacaggaagaagg 27057
>gb|AC007231.9| Arabidopsis thaliana chromosome 2 clone F7D11 map RNS1, complete sequence Length = 19338 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 agaagaagaaactccaaatag 191 ||||||||||||||||||||| Sbjct: 7236 agaagaagaaactccaaatag 7216
>dbj|AK155018.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630116E10 product:weakly similar to 25 kDa brain-specific protein (p25-alpha) [Homo sapiens], full insert sequence Length = 994 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 844 agatgacagggagacaggaagaagg 820
>dbj|AK160507.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310024P08 product:weakly similar to 25 kDa brain-specific protein (p25-alpha) [Homo sapiens], full insert sequence Length = 991 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 844 agatgacagggagacaggaagaagg 820
>ref|XM_682043.1| PREDICTED: Danio rerio hypothetical protein LOC558776 (LOC558776), mRNA Length = 1705 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaact 183 ||||||||||||||||||||| Sbjct: 969 gatgaagaagaagaagaaact 989
>dbj|AK009771.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310043C15 product:BRAIN SPECIFIC PROTEIN homolog [Homo sapiens], full insert sequence Length = 984 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 837 agatgacagggagacaggaagaagg 813
>dbj|AK003376.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110003M05 product:RIKEN cDNA 2700055K07 gene, full insert sequence Length = 302 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 155 agatgacagggagacaggaagaagg 131
>dbj|AK012437.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055K07 product:BRAIN SPECIFIC PROTEIN homolog [Homo sapiens], full insert sequence Length = 988 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 841 agatgacagggagacaggaagaagg 817
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggagc 533 ||||||||||||||||||||| Sbjct: 5633986 agggagagaggaagaaggagc 5634006
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaaa 181 ||||||||||||||||||||| Sbjct: 2224054 ccgatgaagaagaagaagaaa 2224074
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 accgatgaagaagaagaagaa 180 ||||||||||||||||||||| Sbjct: 89882 accgatgaagaagaagaagaa 89862
>gb|AC007546.6| Homo sapiens 12 BAC RP11-946P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168396 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 aagaagaagaagaaactccaa 187 ||||||||||||||||||||| Sbjct: 147016 aagaagaagaagaaactccaa 146996
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaaa 181 ||||||||||||||||||||| Sbjct: 7638 ccgatgaagaagaagaagaaa 7658
>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0030K05 Length = 157835 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggagc 533 ||||||||||||||||||||| Sbjct: 68664 agggagagaggaagaaggagc 68684
>dbj|AP005878.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0012I09 Length = 127774 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggagc 533 ||||||||||||||||||||| Sbjct: 112516 agggagagaggaagaaggagc 112536
>emb|AL357054.14| Human DNA sequence from clone RP11-532F6 on chromosome 6, complete sequence Length = 121656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 536 ggcatgagggccatgggagga 556 ||||||||||||||||||||| Sbjct: 65842 ggcatgagggccatgggagga 65862
>gb|AC151573.2| Mus musculus BAC clone RP23-410B24 from 8, complete sequence Length = 202731 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 agatgacagggagagaggaagaagg 530 |||||||||||||| |||||||||| Sbjct: 84975 agatgacagggagacaggaagaagg 84999
>ref|NM_202227.1| Arabidopsis thaliana kinase AT1G33260 transcript variant AT1G33260.2 mRNA, complete cds Length = 1596 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 24 gatgaagaagaagaagaaac 5
>ref|NM_103054.3| Arabidopsis thaliana kinase AT1G33260 transcript variant AT1G33260.1 mRNA, complete cds Length = 1599 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 24 gatgaagaagaagaagaaac 5
>ref|XM_630457.1| Dictyostelium discoideum hypothetical protein (DDB0189101), partial mRNA Length = 2706 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tttaccaatacctgcaactg 243 |||||||||||||||||||| Sbjct: 1218 tttaccaatacctgcaactg 1199
>ref|XM_630374.1| Dictyostelium discoideum hypothetical protein (DDB0219637), partial mRNA Length = 7326 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tttaccaatacctgcaactg 243 |||||||||||||||||||| Sbjct: 5838 tttaccaatacctgcaactg 5819
>gb|AC115803.17| Mus musculus chromosome 8, clone RP23-410F24, complete sequence Length = 169100 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 69441 gatgaagaagaagaagaaac 69460
>gb|AC160110.2| Mus musculus BAC clone RP24-142M20 from chromosome 9, complete sequence Length = 189619 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 185013 agggagagaggaagaaggag 185032
>gb|AC119908.16| Mus musculus chromosome 7, clone RP24-240G4, complete sequence Length = 190369 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gaagaagaagaagaaactccaaat 189 ||||||||||||||||||| |||| Sbjct: 126618 gaagaagaagaagaaactctaaat 126641
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 gagagaggaagaaggagcagggca 539 |||||||||||||| ||||||||| Sbjct: 51804 gagagaggaagaagcagcagggca 51781
>gb|AC113988.8| Mus musculus chromosome 3, clone RP24-129H9, complete sequence Length = 181881 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 50136 ccgatgaagaagaagaagaa 50117
>gb|AC122791.13| Mus musculus chromosome 13, clone RP24-266G22, complete sequence Length = 165861 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 140958 agggagagaggaagaaggag 140977
>ref|XM_360661.1| Magnaporthe grisea 70-15 hypothetical protein (MG03204.4) partial mRNA Length = 3255 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 3038 ccgatgaagaagaagaagaa 3057
>ref|XM_588775.2| PREDICTED: Bos taurus hypothetical LOC511442 (LOC511442), mRNA Length = 2093 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaactcca 186 ||||||||||||||||||| |||| Sbjct: 693 gatgaagaagaagaagaaaatcca 716
>ref|XM_426459.1| PREDICTED: Gallus gallus similar to G protein-coupled receptor 68 (LOC428904), mRNA Length = 2169 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 aagaagaagaaactccaaat 189 |||||||||||||||||||| Sbjct: 1720 aagaagaagaaactccaaat 1739
>gb|AC141873.4| Mus musculus BAC clone RP24-332J21 from chromosome Y, complete sequence Length = 160015 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 157985 agggagagaggaagaaggag 158004
>ref|XM_864644.1| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 3 (LOC515854), mRNA Length = 2661 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2462 tacaatacatacaattatca 2443
>ref|XM_593946.2| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 2 (LOC515854), mRNA Length = 2410 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2211 tacaatacatacaattatca 2192
>ref|XM_873613.1| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 9 (LOC515854), mRNA Length = 2276 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2077 tacaatacatacaattatca 2058
>ref|XM_873519.1| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 8 (LOC515854), mRNA Length = 2351 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2152 tacaatacatacaattatca 2133
>ref|XM_873415.1| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 7 (LOC515854), mRNA Length = 2294 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2095 tacaatacatacaattatca 2076
>ref|XM_873314.1| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 6 (LOC515854), mRNA Length = 2848 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2649 tacaatacatacaattatca 2630
>ref|XM_873218.1| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 5 (LOC515854), mRNA Length = 2372 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2173 tacaatacatacaattatca 2154
>ref|XM_873115.1| PREDICTED: Bos taurus similar to serum/glucocorticoid regulated kinase, transcript variant 4 (LOC515854), mRNA Length = 1867 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 1668 tacaatacatacaattatca 1649
>ref|XM_589210.2| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2, J1, transcript variant 1 (LOC539754), mRNA Length = 3596 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tcagagggaaagcaggggag 499 |||||||||||||||||||| Sbjct: 2930 tcagagggaaagcaggggag 2911
>ref|XM_878451.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2, J1, transcript variant 7 (LOC539754), mRNA Length = 3714 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tcagagggaaagcaggggag 499 |||||||||||||||||||| Sbjct: 3048 tcagagggaaagcaggggag 3029
>ref|XM_878412.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2, J1, transcript variant 6 (LOC539754), mRNA Length = 3597 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tcagagggaaagcaggggag 499 |||||||||||||||||||| Sbjct: 2931 tcagagggaaagcaggggag 2912
>ref|XM_866344.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2, J1, transcript variant 2 (LOC539754), mRNA Length = 4264 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tcagagggaaagcaggggag 499 |||||||||||||||||||| Sbjct: 3028 tcagagggaaagcaggggag 3009
>gb|BC001263.1| Homo sapiens serum/glucocorticoid regulated kinase, mRNA (cDNA clone MGC:5030 IMAGE:3459056), complete cds Length = 2382 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2156 tacaatacatacaattatca 2137
>ref|XM_706520.1| Candida albicans SC5314 hypothetical protein (CaO19.10878), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 424 gatgaagaagaagaagaaac 443
>ref|XM_706498.1| Candida albicans SC5314 ubiquitin-specific protease (CaO19.3370), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 424 gatgaagaagaagaagaaac 443
>gb|AC147107.2| Mus musculus BAC clone RP24-69F17 from chromosome Y, complete sequence Length = 202338 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 35601 gatgaagaagaagaagaaac 35582
>gb|AY811936.1| Schistosoma japonicum SJCHGC07730 protein mRNA, partial cds Length = 418 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gaagaagaagaagaaactcc 185 |||||||||||||||||||| Sbjct: 50 gaagaagaagaagaaactcc 69
>gb|AC132601.4| Mus musculus BAC clone RP24-165F4 from chromosome Y, complete sequence Length = 186363 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 175228 agggagagaggaagaaggag 175209 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 105185 agggagagaggaagaaggag 105204
>gb|AC133082.3| Mus musculus BAC clone RP24-298C1 from chromosome Y, complete sequence Length = 152853 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 36160 gatgaagaagaagaagaaac 36179
>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence Length = 199083 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactcc 185 |||||||||||||||||||| Sbjct: 41712 gaagaagaagaagaaactcc 41693
>gb|AC132292.3| Mus musculus BAC clone RP24-319L4 from chromosome 5, complete sequence Length = 160517 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gaagaagaagaagaaactccaaat 189 |||||||||||||||| ||||||| Sbjct: 118661 gaagaagaagaagaaattccaaat 118684
>gb|DQ483582.1| Gymnogyps californianus clone 5F microsatellite sequence Length = 613 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggagcagg 536 ||||||||||||||| |||||||| Sbjct: 161 agggagagaggaagagggagcagg 138
>gb|DQ483444.1| Gymnogyps californianus clone 3D microsatellite sequence Length = 704 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggagcagg 536 ||||||||||||||| |||||||| Sbjct: 565 agggagagaggaagagggagcagg 588
>gb|DQ484013.1| Gymnogyps californianus clone 179G microsatellite sequence Length = 705 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggagcagg 536 ||||||||||||||| |||||||| Sbjct: 110 agggagagaggaagagggagcagg 87
>ref|XM_751233.1| Ustilago maydis 521 hypothetical protein (UM00179.1) partial mRNA Length = 1434 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 146 ccgatgaagaagaagaagaa 165
>ref|XM_755573.1| Ustilago maydis 521 hypothetical protein (UM04519.1) partial mRNA Length = 2610 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 2320 gatgaagaagaagaagaaac 2339
>gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosome 3, complete sequence Length = 227492 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 gacagggagagaggaagaag 529 |||||||||||||||||||| Sbjct: 159406 gacagggagagaggaagaag 159387
>gb|BC013832.1| Homo sapiens serum/glucocorticoid regulated kinase, mRNA (cDNA clone IMAGE:4149746) Length = 792 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 563 tacaatacatacaattatca 544
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 108596 gatgaagaagaagaagaaac 108615
>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence Length = 167927 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccaaatagaacaatcatt 201 |||||||||||||||||||| Sbjct: 59225 ctccaaatagaacaatcatt 59206
>gb|AC124504.3| Mus musculus BAC clone RP23-418E15 from chromosome 10, complete sequence Length = 204133 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 78993 agggagagaggaagaaggag 78974
>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence Length = 184032 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 tgacagggagagaggaagaaggag 532 |||||||||||||| ||||||||| Sbjct: 36393 tgacagggagagagaaagaaggag 36370
>ref|XM_805908.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506469.148) partial mRNA Length = 1096 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactcc 185 |||||||||||||||||||| Sbjct: 431 gaagaagaagaagaaactcc 412
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 62459 agggagagaggaagaaggag 62440
>gb|AC010125.4| Homo sapiens PAC clone RP5-1075C10 from 7, complete sequence Length = 171457 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 acaagaagaagatagagaat 480 |||||||||||||||||||| Sbjct: 144826 acaagaagaagatagagaat 144807
>gb|AC116120.6| Mus musculus chromosome 6, clone RP23-78P7, complete sequence Length = 174411 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 130776 agggagagaggaagaaggag 130795
>gb|AC130653.31| Medicago truncatula clone mth1-13b3, complete sequence Length = 166135 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 153066 cgatgaagaagaagaagaaa 153047
>gb|AC163724.4| Mus musculus BAC clone RP23-464C19 from chromosome 6, complete sequence Length = 177662 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 495 gggagggagcaagatgacagggagagaggaag 526 ||||||||| |||| | ||||||||||||||| Sbjct: 98415 gggagggaggaagaaggcagggagagaggaag 98384
>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence Length = 117770 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 68970 cgatgaagaagaagaagaaa 68989
>gb|AC164426.5| Mus musculus BAC clone RP24-320I19 from chromosome 13, complete sequence Length = 160268 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 120874 agggagagaggaagaaggag 120855
>gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's Hospital Oakland Research Institute) complete sequence Length = 212829 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 33184 agggagagaggaagaaggag 33203
>emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 on chromosome Xq22, complete sequence Length = 126263 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 aagaagaagaagaaactcca 186 |||||||||||||||||||| Sbjct: 47961 aagaagaagaagaaactcca 47980
>emb|AL135839.15| Human DNA sequence from clone RP1-188K17 on chromosome 6q22.22-23.3 Contains the part of the SGK gene for serum/glucocorticoid regulated kinase and a CpG island, complete sequence Length = 113673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 22234 tacaatacatacaattatca 22253
>emb|AL031650.22|HS1018D12 Human DNA sequence from clone RP5-1018D12 on chromosome 20q11.1-11.22 Contains part of a CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene, the RPL31P3 gene for ribosomal protein L31 pseudogene 3, a novel pseudogene, the DEFB118 gene for defensin beta 118 and the 3' end of the the DEFB119 gene for defensin beta 119, complete sequence Length = 98490 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agaagaagaaactccaaata 190 |||||||||||||||||||| Sbjct: 15639 agaagaagaaactccaaata 15658
>ref|XM_787248.1| PREDICTED: Strongylocentrotus purpuratus similar to signal recognition particle 72kDa (LOC587523), mRNA Length = 465 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 252 gatgaagaagaagaagaaac 271
>emb|Y10032.1|HSRNASTPK H.sapiens mRNA for putative serine/threonine protein kinase Length = 2370 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2155 tacaatacatacaattatca 2136
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 taggagcggccggtggcgcc 436 |||||||||||||||||||| Sbjct: 192665 taggagcggccggtggcgcc 192684
>emb|AJ000512.1|HSSGK Homo sapiens sgk gene Length = 5718 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 5333 tacaatacatacaattatca 5314
>emb|AL646096.8| Mouse DNA sequence from clone RP23-176J13 on chromosome 11 Contains the 5' end of the Scpep1 gene for serine carboxypeptidase 1, two transcription elongation factor B (SIII) polypeptide 2 (Tceb2) pseudogenes, four novel genes (incl. A930013B10Rik), the Coil gene for coilin, the Trim25 gene for tripartite motif protein 25 and the Dgke gene for diacylglycerol kinase epsilon, complete sequence Length = 171512 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 92524 agggagagaggaagaaggag 92543
>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete sequence Length = 199961 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 478 aatcagagggaaagcaggggaggg 501 |||||||||||| ||||||||||| Sbjct: 125945 aatcagagggaaggcaggggaggg 125968
>gb|AC157919.5| Mus musculus chromosome 3, clone RP23-131B7, complete sequence Length = 190453 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 gacagggagagaggaagaag 529 |||||||||||||||||||| Sbjct: 164309 gacagggagagaggaagaag 164328
>ref|NM_005627.2| Homo sapiens serum/glucocorticoid regulated kinase (SGK), mRNA Length = 2386 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2172 tacaatacatacaattatca 2153
>emb|BX649005.1|HSM809156 Homo sapiens mRNA; cDNA DKFZp686M0890 (from clone DKFZp686M0890) Length = 5503 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 5274 tacaatacatacaattatca 5255
>gb|AC148776.12| Medicago truncatula clone mth2-39g6, complete sequence Length = 109378 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 6588 cgatgaagaagaagaagaaa 6607
>emb|CR596295.1| full-length cDNA clone CS0DI084YK12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2422 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2257 tacaatacatacaattatca 2238
>gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complete sequence Length = 220568 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 caagaagaagatagagaatcagag 485 ||||||||||| |||||||||||| Sbjct: 71080 caagaagaagaaagagaatcagag 71103
>gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y, complete sequence Length = 165543 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 43980 agggagagaggaagaaggag 43961
>dbj|AK055077.1| Homo sapiens cDNA FLJ30515 fis, clone BRAWH2000686, highly similar to SERINE/THREONINE-PROTEIN KINASE SGK (EC 2.7.1.-) Length = 3196 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2998 tacaatacatacaattatca 2979
>gb|AC108174.1| Homo sapiens chromosome 5 clone RP11-78C3, complete sequence Length = 162435 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aatacatacaattatcatgt 65 |||||||||||||||||||| Sbjct: 134996 aatacatacaattatcatgt 135015
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 243 gagatcccgcttggaagaagaacgactccgtgaagcagac 282 |||||||||| ||||||||||||| ||| ||||| |||| Sbjct: 1153 gagatcccgcaaggaagaagaacgagtccatgaagaagac 1192
>dbj|AB169357.1| Macaca fascicularis testis cDNA, clone: QtsA-19250, similar to human serum/glucocorticoid regulated kinase (SGK), mRNA, RefSeq: NM_005627.2 Length = 2371 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2176 tacaatacatacaattatca 2157
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 74624 ccgatgaagaagaagaagaa 74605
>ref|XM_626546.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3590), partial mRNA Length = 19740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 12997 gatgaagaagaagaagaaac 13016
>dbj|AK046159.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230345M08 product:unclassifiable, full insert sequence Length = 1645 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccaaatagaacaatcatt 201 |||||||||||||||||||| Sbjct: 1218 ctccaaatagaacaatcatt 1199
>gb|AC022379.2|AC022379 Homo sapiens chromosome 3 clone 996C6 map 3p, complete sequence Length = 222542 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gggaaagcaggggagggagc 504 |||||||||||||||||||| Sbjct: 122909 gggaaagcaggggagggagc 122890
>gb|AC153586.7| Mus musculus 6 BAC RP23-88E13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188553 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 183839 agggagagaggaagaaggag 183820
>gb|AC105020.18| Homo sapiens chromosome 15, clone CTD-2026K11, complete sequence Length = 110820 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cagggcatgagggccatggg 552 |||||||||||||||||||| Sbjct: 11881 cagggcatgagggccatggg 11862
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 34430575 ccgatgaagaagaagaagaa 34430594 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 28772062 ccgatgaagaagaagaagaa 28772081
>gb|AY756101.1| Perilla frutescens clone KWPE-29 microsatellite sequence Length = 370 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 19 ccgatgaagaagaagaagaa 38
>emb|BX817262.1|CNS0ABQ6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1535 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 24 gatgaagaagaagaagaaac 5
>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete sequence Length = 81609 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 41077 gatgaagaagaagaagaaac 41058
>gb|AC025781.8|AC025781 Arabidopsis thaliana chromosome 1 BAC F15C21 genomic sequence, complete sequence Length = 112862 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 caatacctgcaactgagatc 248 |||||||||||||||||||| Sbjct: 77760 caatacctgcaactgagatc 77779
>gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BAC T4K22 genomic sequence, complete sequence Length = 82281 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 79119 cgatgaagaagaagaagaaa 79138
>gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome 5, complete sequence Length = 245443 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gaagaagaagaagaaactccaaat 189 |||||||||||||||| ||||||| Sbjct: 188241 gaagaagaagaagaaattccaaat 188264
>emb|BX931024.1| Gallus gallus finished cDNA, clone ChEST703i5 Length = 1057 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 ccatgggaggagcttctctccctg 569 ||||||| |||||||||||||||| Sbjct: 110 ccatgggtggagcttctctccctg 133
>gb|AC093774.2| Homo sapiens BAC clone RP11-135O12 from 2, complete sequence Length = 93499 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 cagggagagaggaagaaggagcag 535 |||||| ||||||||||||||||| Sbjct: 46271 cagggacagaggaagaaggagcag 46248
>gb|AC027176.22| Homo sapiens chromosome 15, clone RP11-493E3, complete sequence Length = 150800 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaaat 189 ||||||||||||||||| |||||| Sbjct: 104723 gaagaagaagaagaaacaccaaat 104700
>gb|AC007358.2| Homo sapiens BAC clone RP11-53H10 from 2, complete sequence Length = 155611 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 gaaacaagaagaagatagag 477 |||||||||||||||||||| Sbjct: 112748 gaaacaagaagaagatagag 112767
>gb|AC087284.22| Homo sapiens chromosome 15, clone RP11-617F23, complete sequence Length = 183773 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gaagaagaagaagaaactccaaat 189 ||||||||||||||||| |||||| Sbjct: 142368 gaagaagaagaagaaacaccaaat 142391
>gb|AC173997.2| Mus musculus BAC clone RP24-190A13 from chromosome y, complete sequence Length = 156779 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gatgaagaagaagaagaaac 182 |||||||||||||||||||| Sbjct: 83422 gatgaagaagaagaagaaac 83441
>gb|AC133785.2| Homo sapiens BAC clone RP13-586I5 from 2, complete sequence Length = 73720 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 cagggagagaggaagaaggagcag 535 |||||| ||||||||||||||||| Sbjct: 61817 cagggacagaggaagaaggagcag 61794
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 88635 ccgatgaagaagaagaagaa 88654
>dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_C07 Length = 115190 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgatgaagaagaagaagaa 180 |||||||||||||||||||| Sbjct: 46817 ccgatgaagaagaagaagaa 46836
>dbj|AK098509.1| Homo sapiens cDNA FLJ25643 fis, clone STM07148, highly similar to SERINE/THREONINE-PROTEIN KINASE SGK (EC 2.7.1.-) Length = 2364 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2172 tacaatacatacaattatca 2153
>gb|AC153838.6| Mus musculus 6 BAC RP23-82B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217672 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 56778 agggagagaggaagaaggag 56797
>gb|AF153609.1|AF153609 Homo sapiens serine/threonine protein kinase sgk mRNA, complete cds Length = 2382 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tacaatacatacaattatca 62 |||||||||||||||||||| Sbjct: 2157 tacaatacatacaattatca 2138
>gb|AC121300.11| Mus musculus chromosome 6, clone RP23-408I12, complete sequence Length = 212218 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 31290 agggagagaggaagaaggag 31271
>gb|DQ332054.1| Synthetic construct Saccharomyces cerevisiae clone FLH202462.01X HSC82 gene, complete sequence Length = 2118 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 726 cgatgaagaagaagaagaaa 745
>gb|AC160967.4| Mus musculus BAC clone RP24-385N6 from chromosome y, complete sequence Length = 150231 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 29062 agggagagaggaagaaggag 29043
>emb|CT573026.5| M.truncatula DNA sequence from clone MTH2-39M4 on chromosome 3, complete sequence Length = 109386 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 6593 cgatgaagaagaagaagaaa 6612
>emb|AL935152.9| Mouse DNA sequence from clone RP24-387M5 on chromosome 2, complete sequence Length = 98020 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggagggagcaagatgacagg 515 |||||||||||||||||||| Sbjct: 40778 ggagggagcaagatgacagg 40759
>emb|Z49808.1|SC8010 S.cerevisiae chromosome XIII cosmid 8010 Length = 32661 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 28283 cgatgaagaagaagaagaaa 28302
>gb|AC123806.4| Mus musculus BAC clone RP24-152B7 from 10, complete sequence Length = 160167 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 ggagagaggaagaaggagca 534 |||||||||||||||||||| Sbjct: 54663 ggagagaggaagaaggagca 54682
>emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 852C13 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 222730 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 agaagaagaagaaactccaa 187 |||||||||||||||||||| Sbjct: 138597 agaagaagaagaaactccaa 138616
>gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, complete sequence Length = 165033 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 1161 agggagagaggaagaaggag 1142
>gb|AC147446.3| Gallus gallus BAC clone CH261-7A22 from chromosome unknown, complete sequence Length = 182128 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 ccatgggaggagcttctctccctg 569 ||||||| |||||||||||||||| Sbjct: 105477 ccatgggtggagcttctctccctg 105500
>gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complete sequence Length = 179316 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 24881 agggagagaggaagaaggag 24900
>gb|AC147236.3| Mus musculus BAC clone RP23-357C20 from 1, complete sequence Length = 217902 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctccaaatagaacaatcatt 201 |||||||||||||||||||| Sbjct: 39698 ctccaaatagaacaatcatt 39717
>gb|AC141428.4| Mus musculus BAC clone RP23-127I7 from 10, complete sequence Length = 164381 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 ggagagaggaagaaggagca 534 |||||||||||||||||||| Sbjct: 137306 ggagagaggaagaaggagca 137325
>emb|CT030180.3| M.truncatula DNA sequence from clone MTH2-177C12 on chromosome 3, complete sequence Length = 141577 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atgaagaagaagaagaaact 183 |||||||||||||||||||| Sbjct: 32213 atgaagaagaagaagaaact 32232
>emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chromosome 9, complete sequence Length = 243795 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 agggagagaggaagaaggag 532 |||||||||||||||||||| Sbjct: 216649 agggagagaggaagaaggag 216630
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 aacaagaagaagatagagaa 479 |||||||||||||||||||| Sbjct: 761282 aacaagaagaagatagagaa 761301
>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence Length = 207606 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gggaaagcaggggagggagc 504 |||||||||||||||||||| Sbjct: 144897 gggaaagcaggggagggagc 144878
>dbj|AP006667.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT31L14, TM0366, complete sequence Length = 100936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atgaagaagaagaagaaact 183 |||||||||||||||||||| Sbjct: 9287 atgaagaagaagaagaaact 9306 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atgaagaagaagaagaaact 183 |||||||||||||||||||| Sbjct: 4832 atgaagaagaagaagaaact 4851
>dbj|AP006086.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20G22, TM0150, complete sequence Length = 93469 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acaagaagaagatagagaat 480 |||||||||||||||||||| Sbjct: 27416 acaagaagaagatagagaat 27435
>dbj|AP004984.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44N06, TM0438, complete sequence Length = 107764 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acaagaagaagatagagaat 480 |||||||||||||||||||| Sbjct: 63756 acaagaagaagatagagaat 63775
>emb|AL928732.7| Mouse DNA sequence from clone RP23-403C18 on chromosome 2, complete sequence Length = 149273 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactcc 185 |||||||||||||||||||| Sbjct: 46590 gaagaagaagaagaaactcc 46571
>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete sequence Length = 230186 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 agcaagatgacagggagaga 521 |||||||||||||||||||| Sbjct: 29731 agcaagatgacagggagaga 29750
>emb|AL671185.8| Mouse DNA sequence from clone RP23-192N1 on chromosome X, complete sequence Length = 229574 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 aagaagaaactccaaatagaacaa 196 |||||| ||||||||||||||||| Sbjct: 176594 aagaagcaactccaaatagaacaa 176571
>emb|AL929244.8| Mouse DNA sequence from clone RP23-456L5 on chromosome 2, complete sequence Length = 86351 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 gaaacaagaagaagatagag 477 |||||||||||||||||||| Sbjct: 9218 gaaacaagaagaagatagag 9199
>gb|K03271.1|CHKRT1 Chicken (ev-) reverse transcriptase-related DNA, segment 1 Length = 336 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 ccatgggaggagcttctctccctg 569 ||||||| |||||||||||||||| Sbjct: 30 ccatgggtggagcttctctccctg 53
>gb|AC027128.5| Homo sapiens chromosome 3 clone RP11-627C1 map 3p, complete sequence Length = 175773 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gggaaagcaggggagggagc 504 |||||||||||||||||||| Sbjct: 165127 gggaaagcaggggagggagc 165146
>gb|M26044.1|YSCHSC82 S. cerevisiae HSC82 gene encoding hsc82, the constitutive homolog of the hsp82 heat shock protein, complete cds Length = 2627 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgatgaagaagaagaagaaa 181 |||||||||||||||||||| Sbjct: 1137 cgatgaagaagaagaagaaa 1156
>dbj|AB019513.1| Streptomyces coelicolor genes for alcohol dehydrogenase and ABC transporter, complete cds Length = 4417 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 taggagcggccggtggcgcc 436 |||||||||||||||||||| Sbjct: 793 taggagcggccggtggcgcc 812
>emb|AL672056.4| Mouse DNA sequence from clone RP23-467O2 on chromosome X, complete sequence Length = 150695 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 gaagaagaagaagaaactccaaat 189 |||||||||||||||||| ||||| Sbjct: 139929 gaagaagaagaagaaacttcaaat 139906 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,342,551 Number of Sequences: 3902068 Number of extensions: 6342551 Number of successful extensions: 793549 Number of sequences better than 10.0: 208 Number of HSP's better than 10.0 without gapping: 208 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 790631 Number of HSP's gapped (non-prelim): 2868 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
