ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61p21 |
|---|---|
| Clone Library Name | barley_pub |
>ARAL_BACSU (P94526) Arabinose operon protein araL| Length = 272 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = -1 Query: 405 MGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 +GKP ++ +A G+ AHEC+ +GDS+ DI GM SA + G Sbjct: 191 VGKPSWLMAEAACTAMGLSAHECMIIGDSIESDIAMGKLYGMKSALVLTG 240
>Y970_METKA (Q8TWR2) Putative HAD-hydrolase MK0970 (EC 3.-.-.-)| Length = 233 Score = 40.0 bits (92), Expect = 0.003 Identities = 21/48 (43%), Positives = 27/48 (56%) Frame = -1 Query: 399 KPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 KP+ I+ A GV+ E + VGD L DI+GAN AGM + I G Sbjct: 152 KPNPKIFIEAARRLGVKPEEAVYVGDRLDKDIRGANRAGMVTVRIRRG 199
>GPH1_PSEAE (Q9S586) Phosphoglycolate phosphatase 1 (EC 3.1.3.18) (PGPase 1)| (PGP 1) Length = 272 Score = 37.0 bits (84), Expect = 0.025 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 +GG+ KPD M +AG+E + + VGDS +D+ A AG+ A +T G Sbjct: 148 IGGDTLPQQKPDPAALLFVMKMAGIEPEDALFVGDS-RNDVLAAKAAGVRCAALTYG 203
>NANP_RAT (Q5M969) N-acylneuraminate-9-phosphatase (EC 3.1.3.29)| (Neu5Ac-9-Pase) (Haloacid dehalogenase-like hydrolase domain-containing protein 4) Length = 248 Score = 36.6 bits (83), Expect = 0.033 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGM-ASAFI--TGG 256 +GGE K KP I+ L GV+ +C+ VGD+L DI+G AG+ A+ +I +GG Sbjct: 156 VGGEQK-EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGG 214 Query: 255 I 253 + Sbjct: 215 V 215
>NANP_MOUSE (Q9CPT3) N-acylneuraminate-9-phosphatase (EC 3.1.3.29)| (Neu5Ac-9-Pase) (Haloacid dehalogenase-like hydrolase domain-containing protein 4) Length = 248 Score = 36.6 bits (83), Expect = 0.033 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGM 280 +GGE K KP I+ L GV+ +C+ VGD+L DI+G AG+ Sbjct: 156 IGGEQK-EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGL 203
>GPH_PSESS (P42510) Probable phosphoglycolate phosphatase (EC 3.1.3.18)| (PGPase) (PGP) (Fragment) Length = 160 Score = 35.8 bits (81), Expect = 0.056 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 +GG+ KPD M +AGV A + + VGDS D++ A AG+A ++ G Sbjct: 36 IGGDTMPQKKPDPAALFFVMKMAGVPASQALFVGDS-RSDVQAAKAAGVACVALSYG 91
>NAGD_ECOLI (P0AF24) Protein nagD| Length = 250 Score = 35.0 bits (79), Expect = 0.095 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%) Frame = -1 Query: 453 GTLAAKYEXLGGEVK-WMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMA 277 G L A E + G ++GKP I +A+ + E + VGD+L DI AG+ Sbjct: 157 GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLE 216 Query: 276 SAFITGGIHAAELGLVEFRETAGDDAISALCYKHSSYPSYVLPSFA 139 + + G+ + D I ++ ++ PS++ PS A Sbjct: 217 TILVLSGVSSL-------------DDIDSMPFR----PSWIYPSVA 245
>NAGD_ECO57 (P0AF25) Protein nagD| Length = 250 Score = 35.0 bits (79), Expect = 0.095 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%) Frame = -1 Query: 453 GTLAAKYEXLGGEVK-WMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMA 277 G L A E + G ++GKP I +A+ + E + VGD+L DI AG+ Sbjct: 157 GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLE 216 Query: 276 SAFITGGIHAAELGLVEFRETAGDDAISALCYKHSSYPSYVLPSFA 139 + + G+ + D I ++ ++ PS++ PS A Sbjct: 217 TILVLSGVSSL-------------DDIDSMPFR----PSWIYPSVA 245
>NANP_HUMAN (Q8TBE9) N-acylneuraminate-9-phosphatase (EC 3.1.3.29)| (Neu5Ac-9-Pase) (Haloacid dehalogenase-like hydrolase domain-containing protein 4) Length = 248 Score = 34.7 bits (78), Expect = 0.12 Identities = 19/49 (38%), Positives = 28/49 (57%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGM 280 +GGE + KP I+ L GV+ +C+ VGD+L DI+G AG+ Sbjct: 156 VGGEQR-EEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGL 203
>Y209_METTH (O26311) Putative HAD-hydrolase MTH209 (EC 3.-.-.-)| Length = 226 Score = 34.3 bits (77), Expect = 0.16 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -1 Query: 399 KPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGGIHAAELGLVE 226 KP+ I+ A+ G + + VG+ + DI GA AGM++ + + AE VE Sbjct: 150 KPNIRIFEEALRRMGCKPERSVMVGNKFNEDILGATNAGMSAILVNSELTEAERDHVE 207
>P845_THEAC (Q9HJW8) Phosphatase Ta0845 (EC 3.1.3.-)| Length = 208 Score = 33.5 bits (75), Expect = 0.28 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -1 Query: 402 GKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 GKPD Y A+ + G+ A ECI VGD + +D+ A S + G Sbjct: 130 GKPDPEPYLKALKMMGIPAEECIVVGD-IENDLIPAKKLRCISVLVKHG 177
>GPH_VIBPA (Q87L12) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 228 Score = 33.1 bits (74), Expect = 0.36 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = -1 Query: 441 AKY--EXLGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAF 268 AKY + LGG+ KP+ V M V+A E + VGDS +DI A AG AS Sbjct: 136 AKYFVDVLGGDAFPEKKPNPVALNWLMEKHQVKASEMLMVGDS-KNDILAAKNAGCASFG 194 Query: 267 ITGGIHAAE 241 +T G + E Sbjct: 195 LTYGYNHGE 203
>Y1437_METJA (Q58832) Putative HAD-hydrolase MJ1437 (EC 3.-.-.-)| Length = 228 Score = 32.0 bits (71), Expect = 0.80 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = -1 Query: 405 MGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 +GKP + + G++A E + VGD + DIK A GM + I G Sbjct: 148 LGKPHLEFFKYGLKRMGLKAEETVYVGDRVDKDIKPAKELGMITVRILKG 197
>GPH_PSEPU (P42509) Probable phosphoglycolate phosphatase (EC 3.1.3.18)| (PGPase) (PGP) (Fragment) Length = 251 Score = 32.0 bits (71), Expect = 0.80 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 +GG+ KPD M +AGV + + VGDS D+ A AG+ +T G Sbjct: 127 IGGDTLPQKKPDPAALLFVMQMAGVTPQQSLFVGDS-RSDVLAAKAAGVQCVGLTYG 182
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 31.6 bits (70), Expect = 1.0 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 1/106 (0%) Frame = -1 Query: 360 AGVEAHECITVGDSLHHDIKGANGAGMASAFITGGIHAAELGLVEFRETAGDDAISALCY 181 A V+AH + S HD G A + ++ AA L E A + C Sbjct: 45 ADVDAHPAMVEAISDGHDEGGFASAAGVAEYLEKQAAAASASLASLVEARASSADAFTCV 104 Query: 180 KHSSYPSYVLP-SFAW*KHGTPFNQDSDSGPA*PYSFELSKRASRP 46 + SY +VLP + PF+ S + A Y F + A P Sbjct: 105 VYDSYEDWVLPVARRMGLPAVPFSTQSCAVSAVYYHFSQGRLAVPP 150
>PGMB_ECOLI (P77366) Putative beta-phosphoglucomutase (EC 5.4.2.6) (Beta-PGM)| Length = 219 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 Query: 399 KPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGGIHAAEL 238 KPD I+ +A GV CI + D+ I N +GM S I G+ A+L Sbjct: 147 KPDPEIFLAACAGLGVPPQACIGIEDA-QAGIDAINASGMRSVGIGAGLTGAQL 199
>PNPP_YEAST (P19881) 4-nitrophenylphosphatase (EC 3.1.3.41) (PNPPase)| Length = 312 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -1 Query: 408 WMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIK-GANGAGMASAFITGGIHAAELGL 232 + GKP++ + S + ++ +C VGD L+ D+K G G + + GI E L Sbjct: 226 YCGKPNQNMLNSIISAFNLDRSKCCMVGDRLNTDMKFGVEGGLGGTLLVLSGIETEERAL 285
>GPH_XYLFT (Q87BG6) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 229 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGGIHA 247 +GG+ KP + +A GV +C+ VGD + DI+ A AGM S G + Sbjct: 142 IGGDTLAERKPHPLPLLTAAERIGVMPTDCVYVGDDV-RDIQAARAAGMPSMVALWGYRS 200 Query: 246 AE 241 E Sbjct: 201 HE 202
>GPH_XYLFA (Q9PAM6) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 229 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGGIHA 247 +GG+ KP + +A GV +C+ VGD + DI+ A AGM S G + Sbjct: 142 IGGDTLAERKPHPLPLLTAAERIGVMPTDCVYVGDDV-SDIQAARAAGMPSMVALWGYRS 200 Query: 246 AE 241 E Sbjct: 201 HE 202
>GPH_RHILO (Q98ML8) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 227 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -1 Query: 399 KPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGM 280 KPD T + LAG +AH + VGDS DI A AG+ Sbjct: 146 KPDPRHLTETIRLAGGDAHRALMVGDS-QTDIDTAKAAGI 184
>GPH_XANCP (Q8P8H3) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 221 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMAS 274 +GG+ KP + A GV A +C+ VGD DI A AGM S Sbjct: 134 IGGDTLAERKPHPLPLLVAADRIGVAATQCVYVGDD-ERDILAARAAGMPS 183
>PARM1_MOUSE (Q923D3) Protein PARM-1 precursor| Length = 296 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +2 Query: 203 SSPAVSLNSTSPSS--AAWIPPVMNADAIPAPFAPLMSWCSESPTVMHSCASTPAKHI 370 +SPA SL+ + +S ++ V N AP AP SPT HS + TP H+ Sbjct: 150 TSPATSLSESLSASVTSSHNSTVANIQPTEAPMAPA------SPTEEHSSSHTPTSHV 201
>PPAX_BACHD (Q9K6Y7) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 215 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -1 Query: 399 KPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFI 265 KP+ AM G + E I VGD+ HDI G AG+ +A + Sbjct: 138 KPNPEPLEKAMNALGAKKEETIMVGDN-SHDILGGKNAGVKTAVV 181
>PLPP_MOUSE (P60487) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP| phosphatase) Length = 292 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -1 Query: 453 GTLAAKYEXLGG-EVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMA 277 G+LAA E G + +GKP ++ V+ + VGD L DI + GM Sbjct: 190 GSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMT 249 Query: 276 SAFITGGIHAAE 241 + G+ + E Sbjct: 250 TVLTLTGVSSLE 261
>PLPP_RAT (Q8VD52) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP| phosphatase) (Reg I binding protein 1) Length = 309 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -1 Query: 453 GTLAAKYEXLGG-EVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMA 277 G+LAA E G + +GKP ++ V+ + VGD L DI + GM Sbjct: 190 GSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARMLMVGDRLETDILFGHRCGMT 249 Query: 276 SAFITGGIHAAE 241 + G+ + E Sbjct: 250 TVLTLTGVSSLE 261
>GPH_CAUCR (Q9A5Z2) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 237 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = -1 Query: 426 LGGEVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGG 256 +G ++ KPD +A+ G + + +GDS+ +D GA AG+ ++ G Sbjct: 143 IGADLAPAAKPDGRHVAAAVAAVGGDVSRAVMIGDSV-NDALGARNAGVPGVLVSFG 198
>YJJG_ECOLI (P0A8Y1) 5'-nucleotidase yjjG (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 225 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 405 MGKPDKVIYTSAMCLAG-VEAHECITVGDSLHHDIKGANGAGMASAFI 265 + KP+K I+ A+ AG + + VGD+ DI G AG+A+ ++ Sbjct: 148 VAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWL 195
>YJJG_ECO57 (P0A8Y2) 5'-nucleotidase yjjG (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 225 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 405 MGKPDKVIYTSAMCLAG-VEAHECITVGDSLHHDIKGANGAGMASAFI 265 + KP+K I+ A+ AG + + VGD+ DI G AG+A+ ++ Sbjct: 148 VAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWL 195
>TRUA_BURCE (Q83WJ5) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 270 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +2 Query: 245 AAWIPPVMNADAIPAPFAPLMSWCSESPTVMHSCAS-TPAKHIADV*ITLSGFPIHF 412 A WI ++ DA+ A A L+ S C S TP KH+ ++ I G +HF Sbjct: 127 AGWIHTPLDDDAMRAAAAHLLGEHDFSAFRSSECQSKTPVKHLYEIDIRRVGHFLHF 183
>HIS8_DEHE1 (Q3Z879) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 358 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +3 Query: 66 TIQKSMVTLDRYH-YPD*TVYRV 131 T+QK+M T D+YH YPD T + + Sbjct: 49 TVQKAMSTFDQYHIYPDATQFEI 71
>PLPP_HUMAN (Q96GD0) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP| phosphatase) Length = 296 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Frame = -1 Query: 453 GTLAAKYEXLGG-EVKWMGKPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMA 277 G+LAA E G + +GKP ++ ++ + VGD L DI + GM Sbjct: 194 GSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMT 253 Query: 276 SAFITGGIHAAE 241 + G+ E Sbjct: 254 TVLTLTGVSRLE 265
>PARM1_RAT (Q6P9X9) Protein PARM-1 precursor (Prostatic androgen-repressed| message 1 protein) (Castration-induced prostatic apoptosis-related protein 1) (CIPAR-1) Length = 296 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 200 ASSPAVSLNSTSPSSAAWIPPVMNADAIPAPFAPLMSWCSESPTVMHSCASTPAKHIAD 376 A+SP+ L+++ S+ + V N AP AP SPT HS + TP H+ + Sbjct: 154 ATSPSEPLSASVTSNHS--STVNNIQPTGAPMAPA------SPTEEHSSSHTPTSHVTE 204
>PPAX_BACSU (Q9JMQ2) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 216 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 399 KPDKVIYTSAMCLAGVEAHECITVGDSLHHDIKGANGAGMASAFITGGIHAAEL 238 KPD A+ G E E I VGD+ +HD+ AG +A + I E+ Sbjct: 141 KPDPEPVLLALKQLGSEPAEAIMVGDN-YHDVLAGKNAGTKTAGVAWTIKGPEM 193
>JAG1_HUMAN (P78504) Jagged-1 precursor (Jagged1) (hJ1) (CD339 antigen)| Length = 1218 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Frame = +2 Query: 83 GYAGP---LSLS*LNGVPCFYHANEGKT*DGYELCL*--HNAL----MASSPAVSLNSTS 235 G+AGP ++++ PC + A +GY H+ ++ P +++ S Sbjct: 811 GFAGPDCRININECQSSPCAFGATCVDEINGYRCVCPPGHSGAKCQEVSGRPCITMGSVI 870 Query: 236 PSSAAWIPPVMNADAIPAPFAPLMSWCSESPTVMH 340 P A W + A WC P ++H Sbjct: 871 PDGAKWDDDCNTCQCLNGRIACSKVWCGPRPCLLH 905 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,977,572 Number of Sequences: 219361 Number of extensions: 1397854 Number of successful extensions: 3601 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3589 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
