>TOC75_ORYSA (Q84Q83) Protein TOC75, chloroplast precursor (75 kDa translocon at|
           the outer-envelope-membrane of chloroplasts)
          Length = 817

 Score =  149 bits (377), Expect = 4e-36
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = -3

Query: 559 RVPVKNTYVYGFAEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGVGVKLGLVRGEYIVDHN 380
           R+PV+NTYVYGF EHGTDLGSSKDVKGNPTEFFRRVGHGSSYG+GVKLGLVRGEYIVDHN
Sbjct: 744 RIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLVRGEYIVDHN 803

Query: 379 TGAGTVFFRFGERF 338
            G GTVFFRFGERF
Sbjct: 804 AGTGTVFFRFGERF 817

>TOC75_PEA (Q43715) Protein TOC75, chloroplast precursor (75 kDa translocon at|
           the outer-envelope-membrane of chloroplasts) (Import
           intermediate associated protein of 75 kDa) (75 kDa
           chloroplast outer envelope protein)
          Length = 809

 Score =  127 bits (319), Expect = 2e-29
 Identities = 57/74 (77%), Positives = 64/74 (86%)
 Frame = -3

Query: 559 RVPVKNTYVYGFAEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGVGVKLGLVRGEYIVDHN 380
           R+P+K T+VY FAEHGTDLGSSKDVKGNPT  +RR+G GSSYG G+KLGLVR EY VDHN
Sbjct: 736 RIPIKGTHVYAFAEHGTDLGSSKDVKGNPTVVYRRMGQGSSYGAGMKLGLVRAEYAVDHN 795

Query: 379 TGAGTVFFRFGERF 338
           +G G VFFRFGERF
Sbjct: 796 SGTGAVFFRFGERF 809

>TC753_ARATH (Q9STE8) Protein TOC75-3, chloroplast precursor (75 kDa translocon|
           at the outer-envelope-membrane of chloroplasts 3)
           (AtTOC75-III)
          Length = 818

 Score =  125 bits (313), Expect = 1e-28
 Identities = 56/74 (75%), Positives = 61/74 (82%)
 Frame = -3

Query: 559 RVPVKNTYVYGFAEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGVGVKLGLVRGEYIVDHN 380
           R+PVKNT+VY F EHG DLGSSKDVKGNPT  +RR G GSSYG GVKLGLVR EY VDHN
Sbjct: 745 RIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVKLGLVRAEYAVDHN 804

Query: 379 TGAGTVFFRFGERF 338
            G G +FFRFGER+
Sbjct: 805 NGTGALFFRFGERY 818

>TC754_ARATH (Q5IZC8) Chloroplastic protein TOC75-4 (75 kDa translocon at the|
           outer-envelope-membrane of chloroplasts 4) (AtTOC75-IV)
          Length = 396

 Score =  122 bits (307), Expect = 5e-28
 Identities = 54/74 (72%), Positives = 63/74 (85%)
 Frame = -3

Query: 559 RVPVKNTYVYGFAEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGVGVKLGLVRGEYIVDHN 380
           R+PVKNT+VY FAEHG DLGSSKDVKGNPT  +R++GHGSSYG+GVKLG+VR EY V HN
Sbjct: 323 RIPVKNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVKLGMVRAEYTVRHN 382

Query: 379 TGAGTVFFRFGERF 338
            G G +F RFGER+
Sbjct: 383 RGTGALFLRFGERY 396

>THI3_YEAST (Q07471) Thiamine metabolism regulatory protein THI3 (EC 4.1.1.-)|
           (Keto isocaproate decarboxylase KID1)
          Length = 609

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = +1

Query: 70  FLANTRSSAFIYSTSLKLCKINLTSYYKQRTHPDTNLSLFLRK------RTKLHYSAEQK 231
           F   T++ A +YSTS+KL         K  T+PD ++ L L+K       +KL Y   ++
Sbjct: 310 FQYKTKNCALLYSTSVKL---------KNATYPDLSIKLLLQKILANLDESKLSYQPSEQ 360

Query: 232 P 234
           P
Sbjct: 361 P 361

>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 457  RVGHGSSYGVGVKLGLVRGEYIVDHNTGAG 368
            R+ H  S GV V  G ++G+  V+HN G G
Sbjct: 2973 RINHAFSQGVPVNPGFIQGQSSVNHNLGTG 3002

>YHW1_YEAST (P38856) Hypothetical 71.7 kDa protein in REC104-SOL3 intergenic|
           region
          Length = 637

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
 Frame = +2

Query: 203 QNFIIQQNKSHLTFTPTCIATSRLKASIVH*TSQS*RYVLNEMHS--ESLAKSEEDGSSP 376
           +  +I+ +K+H TF P   +     A +   T+Q     + E     E+  K+E+   SP
Sbjct: 266 EEHLIEDDKTHNTFVPVDSSQGSAGAVVAKSTAQERLEQIREQKRILEAQLKNEQVAISP 325

Query: 377 SVVIYNVLSSY-----QAKLDANTI*RSMANPSEELSRVPFHVLGTPKV 508
           ++       SY      + +  N I  ++AN +++++  PF     P+V
Sbjct: 326 ALTTVTAAQSYNPFGTDSSMHTN-IPMAVANQTQQIANNPFVSQTQPQV 373

>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 457  RVGHGSSYGVGVKLGLVRGEYIVDHNTGAG 368
            RV H  S GV V  GL+ G+  V+H+ G G
Sbjct: 2978 RVNHVFSQGVQVNPGLIPGQSTVNHSLGTG 3007

>SYE_VIBCH (O31153) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 474

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +1

Query: 100 IYSTSLKLCKINLTSYYKQRTHPDTNLSLFLRKRTKLHYSAEQKPPDVHTHMHSHFETQG 279
           I+S    +   +L +  K  +  +T+  L+L      HY    +P  V  H+  HFE QG
Sbjct: 279 IFSRDEMINLFSLNAISKSASAFNTDKLLWLNN----HYIKTSEPEYVAKHLEWHFENQG 334

Query: 280 LNCA 291
           +N A
Sbjct: 335 INKA 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,599,249
Number of Sequences: 219361
Number of extensions: 1533751
Number of successful extensions: 3759
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3757
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)