Clone Information

BLAST Search Result

Clone Name	rbah62a07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CATA2_MAIZE (P12365) Catalase isozyme 2 (EC 1.11.1.6)	41	8e-04
2	CATA1_WHEAT (Q43206) Catalase-1 (EC 1.11.1.6)	41	8e-04
3	CATA2_LYCES (Q9XHH3) Catalase isozyme 2 (EC 1.11.1.6)	37	0.014
4	CATA2_ARATH (P25819) Catalase-2 (EC 1.11.1.6)	37	0.014
5	CATA1_NICPL (P49315) Catalase isozyme 1 (EC 1.11.1.6) (Fragment)	37	0.014
6	CATA_SOLAP (O24339) Catalase (EC 1.11.1.6)	36	0.025
7	CATA2_GOSHI (P30567) Catalase isozyme 2 (EC 1.11.1.6)	36	0.025
8	CATA_HELAN (P45739) Catalase (EC 1.11.1.6)	36	0.032
9	CATA_AVIMR (Q9AXH0) Catalase (EC 1.11.1.6)	36	0.032
10	CATA3_ARATH (Q42547) Catalase-3 (EC 1.11.1.6)	36	0.032
11	CATA_CAPAN (Q9M5L6) Catalase (EC 1.11.1.6) (CaCat1)	35	0.042
12	CATA3_NICPL (P49317) Catalase isozyme 3 (EC 1.11.1.6)	35	0.042
13	CATA2_SOLTU (P55312) Catalase isozyme 2 (EC 1.11.1.6)	35	0.042
14	CATA1_SOLTU (P49284) Catalase isozyme 1 (EC 1.11.1.6)	35	0.042
15	CATA1_LYCES (P30264) Catalase isozyme 1 (EC 1.11.1.6)	35	0.042
16	CATA2_NICPL (P49316) Catalase isozyme 2 (EC 1.11.1.6)	35	0.055
17	CATA2_CUCPE (P48351) Catalase isozyme 2 (EC 1.11.1.6)	35	0.055
18	CATA1_TOBAC (P49319) Catalase isozyme 1 (EC 1.11.1.6) (Salicylic...	35	0.055
19	CATA_SOLME (P55311) Catalase (EC 1.11.1.6)	34	0.093
20	CATA2_ORYSA (P55309) Catalase isozyme B (EC 1.11.1.6) (CAT-B)	34	0.093
21	CATA1_ARATH (Q96528) Catalase-1 (EC 1.11.1.6)	34	0.093
22	CATA3_SOYBN (O48560) Catalase-3 (EC 1.11.1.6)	34	0.12
23	CATA3_CUCPE (P48352) Catalase isozyme 3 (EC 1.11.1.6)	34	0.12
24	CATA2_WHEAT (P55313) Catalase (EC 1.11.1.6)	34	0.12
25	CATA1_SOYBN (P29756) Catalase-1/2 (EC 1.11.1.6)	34	0.12
26	CATA1_RICCO (Q01297) Catalase isozyme 1 (EC 1.11.1.6)	34	0.12
27	CATA1_HORVU (P55307) Catalase isozyme 1 (EC 1.11.1.6)	34	0.12
28	CATA1_CUCPE (P48350) Catalase isozyme 1 (EC 1.11.1.6)	34	0.12
29	CATA_PEA (P25890) Catalase (EC 1.11.1.6)	33	0.16
30	CATA_IPOBA (P07145) Catalase (EC 1.11.1.6)	33	0.16
31	CATA4_SOYBN (O48561) Catalase-4 (EC 1.11.1.6)	33	0.21
32	CATA2_RICCO (P49318) Catalase isozyme 2 (EC 1.11.1.6)	33	0.21
33	CATA1_GOSHI (P17598) Catalase isozyme 1 (EC 1.11.1.6)	33	0.21
34	CATA1_MAIZE (P18122) Catalase isozyme 1 (EC 1.11.1.6)	32	0.35
35	CATA1_ORYSA (P29611) Catalase isozyme A (EC 1.11.1.6) (CAT-A)	32	0.46
36	CATA_PHAAU (P32290) Catalase (EC 1.11.1.6)	32	0.61
37	CATA2_HORVU (P55308) Catalase isozyme 2 (EC 1.11.1.6)	30	1.3
38	CATA_SECCE (P55310) Catalase (EC 1.11.1.6)	30	1.3
39	POLN_WEEV (P13896) Nonstructural polyprotein (Polyprotein nsP123...	28	6.7

>CATA2_MAIZE (P12365) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 491

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQKLASRLSAKPSM
Sbjct: 471 SQADRSLGQKLASRLSAKPSM 491

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>CATA1_WHEAT (Q43206) Catalase-1 (EC 1.11.1.6)|
          Length = 492

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKSLGQKLASRLS+KPSM
Sbjct: 472 SQADKSLGQKLASRLSSKPSM 492

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>CATA2_LYCES (Q9XHH3) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 492

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKSLGQKLASRL+ +PS+
Sbjct: 472 SQADKSLGQKLASRLNVRPSI 492

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>CATA2_ARATH (P25819) Catalase-2 (EC 1.11.1.6)|
          Length = 492

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKSLGQKLASRL+ +PS+
Sbjct: 472 SQADKSLGQKLASRLNVRPSI 492

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>CATA1_NICPL (P49315) Catalase isozyme 1 (EC 1.11.1.6) (Fragment)|
          Length = 485

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKSLGQKLASRL+ +PS+
Sbjct: 465 SQADKSLGQKLASRLNVRPSI 485

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>CATA_SOLAP (O24339) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           +QADKSLGQKLASRL+ +P+M
Sbjct: 472 TQADKSLGQKLASRLNVRPTM 492

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>CATA2_GOSHI (P30567) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 492

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKSLGQK+ASRL+ +PS+
Sbjct: 472 SQADKSLGQKIASRLNVRPSI 492

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>CATA_HELAN (P45739) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 35.8 bits (81), Expect = 0.032
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPS 127
           SQADKSLGQK+ASRL+ KP+
Sbjct: 472 SQADKSLGQKIASRLNVKPN 491

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>CATA_AVIMR (Q9AXH0) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 35.8 bits (81), Expect = 0.032
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQKLASRL+ +P+M
Sbjct: 472 SQADKSFGQKLASRLNVRPTM 492

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>CATA3_ARATH (Q42547) Catalase-3 (EC 1.11.1.6)|
          Length = 492

 Score = 35.8 bits (81), Expect = 0.032
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQKLASRL+ +PS+
Sbjct: 472 SQADRSLGQKLASRLNVRPSI 492

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>CATA_CAPAN (Q9M5L6) Catalase (EC 1.11.1.6) (CaCat1)|
          Length = 492

 Score = 35.4 bits (80), Expect = 0.042
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQK+ASRL+ KP+M
Sbjct: 472 SQADKSCGQKVASRLTVKPTM 492

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>CATA3_NICPL (P49317) Catalase isozyme 3 (EC 1.11.1.6)|
          Length = 492

 Score = 35.4 bits (80), Expect = 0.042
 Identities = 15/21 (71%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADK+LGQK+ASRL+ +P+M
Sbjct: 472 SQADKTLGQKIASRLNVRPTM 492

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>CATA2_SOLTU (P55312) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 492

 Score = 35.4 bits (80), Expect = 0.042
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQK+ASRL+ KP+M
Sbjct: 472 SQADKSCGQKVASRLTVKPTM 492

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>CATA1_SOLTU (P49284) Catalase isozyme 1 (EC 1.11.1.6)|
          Length = 492

 Score = 35.4 bits (80), Expect = 0.042
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQK+ASRL+ KP+M
Sbjct: 472 SQADKSCGQKVASRLTVKPTM 492

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>CATA1_LYCES (P30264) Catalase isozyme 1 (EC 1.11.1.6)|
          Length = 492

 Score = 35.4 bits (80), Expect = 0.042
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQK+ASRL+ KP+M
Sbjct: 472 SQADKSCGQKVASRLTVKPTM 492

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>CATA2_NICPL (P49316) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 492

 Score = 35.0 bits (79), Expect = 0.055
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQK+ASRL+ KP+M
Sbjct: 472 SQADKSCGQKVASRLTLKPTM 492

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>CATA2_CUCPE (P48351) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 492

 Score = 35.0 bits (79), Expect = 0.055
 Identities = 14/21 (66%), Positives = 21/21 (100%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           +QAD+SLGQK+ASR++A+P+M
Sbjct: 472 TQADRSLGQKIASRMNARPNM 492

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>CATA1_TOBAC (P49319) Catalase isozyme 1 (EC 1.11.1.6) (Salicylic acid-binding|
           protein) (SABP)
          Length = 492

 Score = 35.0 bits (79), Expect = 0.055
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQK+ASRL+ KP+M
Sbjct: 472 SQADKSCGQKVASRLTLKPTM 492

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>CATA_SOLME (P55311) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 34.3 bits (77), Expect = 0.093
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS GQK+ASRL  KP+M
Sbjct: 472 SQADKSCGQKVASRLLVKPTM 492

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>CATA2_ORYSA (P55309) Catalase isozyme B (EC 1.11.1.6) (CAT-B)|
          Length = 492

 Score = 34.3 bits (77), Expect = 0.093
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQ D SLGQKLASRL+ KP+M
Sbjct: 472 SQCDASLGQKLASRLNLKPNM 492

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>CATA1_ARATH (Q96528) Catalase-1 (EC 1.11.1.6)|
          Length = 492

 Score = 34.3 bits (77), Expect = 0.093
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPS 127
           SQADKSLGQKLA+RL+ +P+
Sbjct: 472 SQADKSLGQKLATRLNVRPN 491

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>CATA3_SOYBN (O48560) Catalase-3 (EC 1.11.1.6)|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQK+AS L+ KPS+
Sbjct: 472 SQADRSLGQKIASHLNLKPSI 492

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>CATA3_CUCPE (P48352) Catalase isozyme 3 (EC 1.11.1.6)|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 14/21 (66%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQK+ASRL+ +P++
Sbjct: 472 SQADRSLGQKIASRLNVRPNI 492

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>CATA2_WHEAT (P55313) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQ D SLGQKLASRL  KP+M
Sbjct: 472 SQCDASLGQKLASRLKIKPNM 492

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>CATA1_SOYBN (P29756) Catalase-1/2 (EC 1.11.1.6)|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQK+AS L+ KPS+
Sbjct: 472 SQADRSLGQKIASHLNLKPSI 492

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>CATA1_RICCO (Q01297) Catalase isozyme 1 (EC 1.11.1.6)|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -2

Query: 183 QADKSLGQKLASRLSAKPSM 124
           Q DKSLGQKLA+RL+ KPS+
Sbjct: 473 QCDKSLGQKLATRLNVKPSI 492

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>CATA1_HORVU (P55307) Catalase isozyme 1 (EC 1.11.1.6)|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQ D SLGQKLASRL  KP+M
Sbjct: 472 SQCDASLGQKLASRLKIKPNM 492

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>CATA1_CUCPE (P48350) Catalase isozyme 1 (EC 1.11.1.6)|
          Length = 492

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQKLAS L+ +PS+
Sbjct: 472 SQADRSLGQKLASHLNVRPSI 492

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>CATA_PEA (P25890) Catalase (EC 1.11.1.6)|
          Length = 494

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQKLAS L+ +PS+
Sbjct: 474 SQADRSLGQKLASHLNMRPSI 494

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>CATA_IPOBA (P07145) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 14/21 (66%), Positives = 20/21 (95%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           +QAD+SLGQK+ASRL+ +P+M
Sbjct: 472 TQADRSLGQKVASRLNIRPTM 492

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>CATA4_SOYBN (O48561) Catalase-4 (EC 1.11.1.6)|
          Length = 492

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQK+AS LS +P++
Sbjct: 472 SQADRSLGQKIASHLSTRPNI 492

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>CATA2_RICCO (P49318) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 492

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           +Q DKSLGQKLASRL+ +P++
Sbjct: 472 TQCDKSLGQKLASRLNVRPNI 492

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>CATA1_GOSHI (P17598) Catalase isozyme 1 (EC 1.11.1.6)|
          Length = 492

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQADKS+GQKLAS L+ +PS+
Sbjct: 472 SQADKSVGQKLASLLNVRPSI 492

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>CATA1_MAIZE (P18122) Catalase isozyme 1 (EC 1.11.1.6)|
          Length = 492

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQ D +LGQKL SRL+ KPSM
Sbjct: 472 SQCDAALGQKLPSRLNLKPSM 492

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>CATA1_ORYSA (P29611) Catalase isozyme A (EC 1.11.1.6) (CAT-A)|
          Length = 492

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQ D+SLG K+A+RL+ KPSM
Sbjct: 472 SQCDESLGVKIANRLNVKPSM 492

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>CATA_PHAAU (P32290) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           SQAD+SLGQK+AS L+ +P++
Sbjct: 472 SQADRSLGQKIASHLNMRPNI 492

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>CATA2_HORVU (P55308) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 494

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           S+ DKS G K+A+RL+ KPSM
Sbjct: 474 SKCDKSCGMKVANRLNVKPSM 494

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>CATA_SECCE (P55310) Catalase (EC 1.11.1.6)|
          Length = 492

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -2

Query: 186 SQADKSLGQKLASRLSAKPSM 124
           S+ DKS G K+A+RL+ KPSM
Sbjct: 472 SKCDKSCGMKVANRLNVKPSM 492

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>POLN_WEEV (P13896) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2466

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 172  VSWPEACEPSQREAEHVITSPQWRTYYVSKSD 77
            V W +A EP    A  V+T  QW T +  K D
Sbjct: 1009 VCWAKALEPVLATANIVLTRQQWETLHPFKHD 1040


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,556,503
Number of Sequences: 219361
Number of extensions: 370903
Number of successful extensions: 891
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 80,573,946
effective HSP length: 37
effective length of database: 72,457,589
effective search space used: 1738982136
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result