ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62a17 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 72.4 bits (176), Expect = 4e-13 Identities = 31/72 (43%), Positives = 57/72 (79%) Frame = -2 Query: 403 MMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFR 224 +M R+ SE++A ID+ V+QL++Q +++A + V+E R +D++V++L+EKET+ G+EFR Sbjct: 549 LMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFR 608 Query: 223 AILSEFTEIPVE 188 I++E+ E+PV+ Sbjct: 609 QIVAEYAEVPVK 620
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 67.4 bits (163), Expect = 1e-11 Identities = 29/66 (43%), Positives = 51/66 (77%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFT 203 S+++A +ID V+++ + Y+ A + V++NRV MD++V++L+EKET+ G+EFR I+ E+T Sbjct: 557 SDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKEYT 616 Query: 202 EIPVEN 185 IP +N Sbjct: 617 AIPEKN 622
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 63.5 bits (153), Expect = 2e-10 Identities = 32/73 (43%), Positives = 49/73 (67%) Frame = -2 Query: 403 MMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFR 224 M + + +E +A ID V+++ YE A++ V +NRV +D IVE LL+KET+ GDEFR Sbjct: 564 MASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFR 623 Query: 223 AILSEFTEIPVEN 185 +LS +T +P +N Sbjct: 624 ELLSTYTILPNKN 636
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 62.8 bits (151), Expect = 4e-10 Identities = 28/70 (40%), Positives = 47/70 (67%) Frame = -2 Query: 403 MMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFR 224 M + + SE +A ID V+ + + +Q +++NRV +DK+V++L+EKET+ GDEFR Sbjct: 550 MGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFR 609 Query: 223 AILSEFTEIP 194 I+ +FT +P Sbjct: 610 QIVGDFTSLP 619
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 59.7 bits (143), Expect = 3e-09 Identities = 31/75 (41%), Positives = 48/75 (64%) Frame = -2 Query: 409 MRMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDE 230 MR+M +SE++ ID+ V+ + + YE L+ ++ NRV MD+IVE L+EKETL G E Sbjct: 531 MRLMPE--VSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKE 588 Query: 229 FRAILSEFTEIPVEN 185 FR ++S+ + N Sbjct: 589 FRQLVSQAARLTAVN 603
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 52.0 bits (123), Expect = 6e-07 Identities = 25/57 (43%), Positives = 39/57 (68%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILS 212 S++ A ID V QL DQAY+ A Q + ENR +D++ E+L+EKET+ +E + +L+ Sbjct: 550 SDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLA 606
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/65 (30%), Positives = 40/65 (61%) Frame = -2 Query: 394 RNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAIL 215 R+ SE +A ID ++ + A++ A + + ENR MD +V+ L+++ET+ G+ FR ++ Sbjct: 591 RSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQLV 650 Query: 214 SEFTE 200 + + Sbjct: 651 ESYQQ 655
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = -2 Query: 403 MMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFR 224 +M R+ +SE++ +D V+ + Y A + +NR +D++V L+EKET+ EF Sbjct: 548 LMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFM 607 Query: 223 AILSE 209 I+ E Sbjct: 608 RIVEE 612
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 44.3 bits (103), Expect = 1e-04 Identities = 21/59 (35%), Positives = 38/59 (64%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEF 206 SEK+A ++DS +K L ++ Y Q + + + A++ +V L EKE ++G+ R I+SE+ Sbjct: 562 SEKMAEEMDSFIKNLLEERYVHVKQTLSDYKDAIEVMVNELFEKEVITGERVREIISEY 620
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/62 (33%), Positives = 36/62 (58%) Frame = -2 Query: 394 RNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAIL 215 R +S+ A +ID VK++ +Q + AL + NR ++ I E +LEKE + G+E +L Sbjct: 558 RRMVSDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLL 617 Query: 214 SE 209 + Sbjct: 618 GQ 619
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/63 (33%), Positives = 39/63 (61%) Frame = -2 Query: 406 RMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEF 227 +M ++ S A +D V++L D+AYE A Q + + + K+ ++L+EKET+ G+EF Sbjct: 633 QMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEF 692 Query: 226 RAI 218 ++ Sbjct: 693 MSL 695
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 42.7 bits (99), Expect = 4e-04 Identities = 20/59 (33%), Positives = 38/59 (64%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEF 206 SEK A ++D +K L ++ Y+ Q + + R A++ +V+ L +KE ++G+ R I+SE+ Sbjct: 556 SEKTAEEMDLFIKNLLEERYQHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISEY 614
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 42.4 bits (98), Expect = 5e-04 Identities = 20/59 (33%), Positives = 38/59 (64%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEF 206 SEK A ++D +K L ++ Y+ Q + + R A++ +V+ L +KE ++G+ R I+SE+ Sbjct: 556 SEKTAEEMDLFIKNLLEERYKHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISEY 614
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 42.0 bits (97), Expect = 6e-04 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Frame = -2 Query: 430 AQSGDVIMRMMARNSM--SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLL 257 +Q G V + N S+++A +ID ++++ + YE A Q + ENR ++ I + LL Sbjct: 528 SQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLL 587 Query: 256 EKETLSGDEFRAILSEFTEIPVEN 185 + ETL ++ + ++ T +P N Sbjct: 588 KVETLDAEQIKHLIDHGT-LPERN 610
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 41.2 bits (95), Expect = 0.001 Identities = 24/71 (33%), Positives = 37/71 (52%) Frame = -2 Query: 424 SGDVIMRMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKET 245 SGD + N SE A ID+ VK++ Q YE A + ++ + + L+E ET Sbjct: 524 SGDDMYGRQPNNETSEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYET 583 Query: 244 LSGDEFRAILS 212 LSG + + +LS Sbjct: 584 LSGQQIKNLLS 594
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/63 (30%), Positives = 39/63 (61%) Frame = -2 Query: 406 RMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEF 227 +M + S A +D+ V++L ++AYE A + + + + K+ ++L+EKET+ G+EF Sbjct: 634 QMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEF 693 Query: 226 RAI 218 ++ Sbjct: 694 MSL 696
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 39.3 bits (90), Expect = 0.004 Identities = 18/63 (28%), Positives = 40/63 (63%) Frame = -2 Query: 406 RMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEF 227 +M ++ S A +D+ V++L ++AY+ A + + + + K+ ++L+EKET+ G+EF Sbjct: 643 QMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEF 702 Query: 226 RAI 218 ++ Sbjct: 703 MSL 705
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 38.9 bits (89), Expect = 0.005 Identities = 22/71 (30%), Positives = 38/71 (53%) Frame = -2 Query: 424 SGDVIMRMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKET 245 + D + + N +SE A ID+ VK++ Q YE A + ++ + + L+E ET Sbjct: 524 NSDDMYGRQSSNEISEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYET 583 Query: 244 LSGDEFRAILS 212 LSG + + +LS Sbjct: 584 LSGQQIKNLLS 594
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -2 Query: 394 RNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 218 + S+SE+ A +ID V+ L ++A A + ++ NR I E LL+ ETL + +A+ Sbjct: 564 QKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -2 Query: 394 RNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 218 + S+SE+ A +ID V+ L ++A A + ++ NR I E LL+ ETL + +A+ Sbjct: 564 QKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 38.1 bits (87), Expect = 0.009 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFT 203 S ++A DID V++L + A+ A + + E R +D + LLEKETL E I + Sbjct: 547 SHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIFASVE 606 Query: 202 EIP 194 + P Sbjct: 607 KRP 609
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 37.7 bits (86), Expect = 0.012 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFT 203 S ++A +ID V++L + A+ A + + E R +D + LLEKETL E +I ++ Sbjct: 547 SHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE 606 Query: 202 EIP 194 + P Sbjct: 607 KRP 609
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 37.7 bits (86), Expect = 0.012 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFT 203 S ++A +ID V++L + A+ A + + E R +D + LLEKETL E +I ++ Sbjct: 547 SHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE 606 Query: 202 EIP 194 + P Sbjct: 607 KRP 609
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 37.0 bits (84), Expect = 0.021 Identities = 16/58 (27%), Positives = 36/58 (62%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSE 209 S+ +A +ID V+++ + Y Q + EN+ ++D + + LL+ ETL ++ ++++ E Sbjct: 551 SDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHE 608
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 37.0 bits (84), Expect = 0.021 Identities = 20/52 (38%), Positives = 31/52 (59%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEF 227 S L +ID VK++ + YE A V E + + +V+ LLEKET++ +EF Sbjct: 540 SPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEF 591
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 37.0 bits (84), Expect = 0.021 Identities = 18/62 (29%), Positives = 37/62 (59%) Frame = -2 Query: 403 MMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFR 224 M ++ S A +D+ V++L ++AY A + + + K+ ++L+EKET+ G+EF Sbjct: 632 MSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFM 691 Query: 223 AI 218 ++ Sbjct: 692 SL 693
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 36.6 bits (83), Expect = 0.027 Identities = 17/63 (26%), Positives = 36/63 (57%) Frame = -2 Query: 406 RMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEF 227 R ++ + K+A +ID ++++ + EIA++ + +N ++ I + LLE ET+ +E Sbjct: 588 RDYSKGTFGSKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEEI 647 Query: 226 RAI 218 I Sbjct: 648 EYI 650
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 35.4 bits (80), Expect = 0.061 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFT 203 SE+ A DID + + ++ Y+ A ++ NR ++ +VE LL ET+ + I E T Sbjct: 609 SEQTAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETILKSDIDYI-HEHT 667 Query: 202 EIPVE 188 ++P E Sbjct: 668 KLPPE 672
>GATE_SULSO (Q97ZH6) Glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.-)| (Glu-ADT subunit E) Length = 633 Score = 34.7 bits (78), Expect = 0.10 Identities = 13/54 (24%), Positives = 33/54 (61%) Frame = -2 Query: 349 VKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVE 188 + +++++ E ++ + E+R++ D I E+L+E T E + I+ ++ +P+E Sbjct: 522 ISKINEEDIEELIKSIYESRISKDSISEILVEYTTSKNVELKDIIRKYEVLPIE 575
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 33.9 bits (76), Expect = 0.18 Identities = 19/65 (29%), Positives = 37/65 (56%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFT 203 SE+ A DID+ + + ++ Y+ A ++ NR ++ +VE LL ET+ + + + T Sbjct: 612 SEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETILKSDI-DFIHKNT 670 Query: 202 EIPVE 188 ++P E Sbjct: 671 KLPPE 675
>GRP1_ORYSA (P25074) Glycine-rich cell wall structural protein 1 precursor| Length = 166 Score = 33.5 bits (75), Expect = 0.23 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G++G GG G G + + +G G G+GQ GGA G+G Sbjct: 66 GQSGGGQGSGGGGGGGGGGSNGSGSGSGYGYGYGQGNGGAQGQG 109
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = -2 Query: 403 MMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFR 224 M+ SE A ID V+ L + AY+ + + E + ++K+ +LLEKE L ++ Sbjct: 683 MVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMV 742 Query: 223 AIL 215 +L Sbjct: 743 ELL 745
>SLT11_NEUCR (Q7RUX3) Pre-mRNA-splicing factor slt-11| Length = 392 Score = 33.1 bits (74), Expect = 0.30 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%) Frame = -1 Query: 422 RGRDHADDGSELHVGEAGARHRLGGEAAVGPGI--------RD-RAAAGEGEPRGHGQDR 270 +GR+ ++G+ ++ +GA GG AVG G+ RD RAAA G G G+ Sbjct: 158 KGREVDEEGNPVNGSSSGAGRATGGNPAVGAGVGGVGPIRTRDSRAAAAAGARPGGGRRP 217 Query: 269 GGAP 258 AP Sbjct: 218 NAAP 221
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 32.7 bits (73), Expect = 0.39 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = -2 Query: 382 SEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 218 SE A+ ID V+++ +AY+ A + + +R I E LL+ ETL + ++ Sbjct: 577 SEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSL 631
>PYRD_RALSO (Q8XYY7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 344 Score = 32.3 bits (72), Expect = 0.51 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -1 Query: 404 DDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGE 252 DD ++G+A RHR+ G A IR A AG H ++ GG G+ Sbjct: 229 DDDQIANIGDALLRHRMDGVIATNTTIRREAVAG----LPHAEEAGGLSGQ 275
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 32.0 bits (71), Expect = 0.67 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 240 G G + GG G G +R++ G EPRG G RGG G G ++ Sbjct: 199 GYGGGQQDRGGRGRGGGGGYNRSSGGY-EPRGRGGGRGGRGGMGGSD 244
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 32.0 bits (71), Expect = 0.67 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 240 G G + GG G G +R++ G EPRG G RGG G G ++ Sbjct: 206 GYGGGQQDRGGRGRGGGGGYNRSSGGY-EPRGRGGGRGGRGGMGGSD 251
>SALA_DROOR (P21748) Protein spalt-accessory precursor| Length = 142 Score = 32.0 bits (71), Expect = 0.67 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 398 GSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAP 258 G +L VG+ G GG AA GP ++ G G P G G GG P Sbjct: 59 GGQLGVGQGGVSPGQGGFAAQGP--PNQYQPGYGSPVGSGHFHGGNP 103
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = -2 Query: 361 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILS 212 ID+ + ++ ++Y+ A + + + E LLE ETLS DE + ++S Sbjct: 589 IDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADEVKRVIS 638
>GRP2_PHAVU (P10496) Glycine-rich cell wall structural protein 1.8 precursor| (GRP 1.8) Length = 465 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Frame = -1 Query: 419 GRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRG--HGQDRGGAPGEG 249 G +H G G AG + GGE G G AG G G HG GG G G Sbjct: 202 GGEHGGGGGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGG 260 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G AG + GGE +G G G G G G + GGA G G Sbjct: 125 GGAGGGYGAGGEHGIGYG----GGGGSGAGGGGGYNAGGAQGGG 164 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G+ GA + GG + G G+ A G GE G+G +GG G G Sbjct: 90 GDQGAGYGGGGGSGGGGGV---AYGGGGERGGYGGGQGGGAGGG 130 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 2/59 (3%) Frame = -1 Query: 419 GRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRG--HGQDRGGAPGEG 249 G +H G AG + GGE G G AG G G HG GG G G Sbjct: 246 GGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGG 304 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 2/59 (3%) Frame = -1 Query: 419 GRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRG--HGQDRGGAPGEG 249 G +H G AG + GGE G G AG G G HG GG G G Sbjct: 224 GGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGG 282 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/57 (31%), Positives = 21/57 (36%) Frame = -1 Query: 419 GRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G +H G AG + GGE G G AG G G GG G+G Sbjct: 268 GGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGGGGGQG 324
>LYAR_MOUSE (Q08288) Cell growth-regulating nucleolar protein| Length = 388 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/46 (41%), Positives = 22/46 (47%) Frame = -1 Query: 377 EAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 240 EAG G EAA G ++ A G+ G DR G PGE AE Sbjct: 225 EAG-HEAAGEEAAEASGPPEKKKAQGGQASEEGADRNGGPGEDAAE 269
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = -1 Query: 422 RGRDHADDGSELHVGEAGARHRLGGEAAVGP--GIRDRAAAGEGEPRGHGQDRGGAPGEG 249 RG D G + G G +R GG G GIR+ + RG G GG G G Sbjct: 157 RGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDRGGGNRFGGGGGFG 216 Query: 248 D 246 D Sbjct: 217 D 217
>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor| Length = 1901 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -1 Query: 422 RGRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRG----GAPG 255 RG D D S L +G +G GG+ G G G G+G D G GA G Sbjct: 1000 RGGDGGDGASGLGLGLSGFDGGQGGQGGAGGSAGAGGINGAGGAGGNGGDGGDGATGAAG 1059 Query: 254 EGD 246 GD Sbjct: 1060 LGD 1062 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -1 Query: 422 RGRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRG----GAPG 255 RG D D S L +G +G GG+ G G G G+G D G GA G Sbjct: 799 RGGDGGDGASGLGLGLSGFDGGQGGQGGAGGSAGAGGINGAGGAGGNGGDGGDGATGAAG 858 Query: 254 EGD 246 GD Sbjct: 859 LGD 861 Score = 29.6 bits (65), Expect = 3.3 Identities = 21/57 (36%), Positives = 27/57 (47%) Frame = -1 Query: 419 GRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G+ A L VG +G GG+A G G AAG+ G+G RGG G+G Sbjct: 952 GKGGAGGAGTLGVGGSGGTGGDGGDAGSGGGGGFGGAAGKAGGGGNG-GRGGDGGDG 1007
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 30.4 bits (67), Expect = 1.9 Identities = 23/58 (39%), Positives = 27/58 (46%) Frame = -1 Query: 425 ERGRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGE 252 E G+D A G+ GEAGA GE PG + AAAGE E G + P E Sbjct: 191 EGGKDEASGGAAAAAGEAGA---APGEPTAAPG--EEAAAGE-EGAAGGDPQEAKPEE 242
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 30.0 bits (66), Expect = 2.5 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = -2 Query: 361 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSE 209 IDS V ++ + ++ + ++E ++KI +VLL+KE L+ ++ +L + Sbjct: 735 IDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGK 785
>PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)| (p21-activated kinase 4) (PAK-4) Length = 591 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAG-EGEPRGHGQDRGG 264 G+AG+R R G + G G DR AG E P+ + GG Sbjct: 130 GKAGSRGRFAGHSEAGGGSGDRRRAGPEKRPKSSREGSGG 169
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 30.0 bits (66), Expect = 2.5 Identities = 13/49 (26%), Positives = 26/49 (53%) Frame = -2 Query: 361 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAIL 215 +D V ++ + Y + + E + ++ I LLE+ET+ DEF ++ Sbjct: 530 VDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEFEEVI 578
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/52 (30%), Positives = 30/52 (57%) Frame = -2 Query: 406 RMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEK 251 +M + S A +DS V++L ++AYE A Q + + + K+ ++L+EK Sbjct: 611 QMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662
>B028_CAEEL (P41996) Cytokinesis protein B0280.5 precursor| Length = 524 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -1 Query: 383 VGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 240 +G G+ G + G G A+GEG G+ G A GEG E Sbjct: 74 IGCEGSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEASGEGSGE 121
>PO4F1_HUMAN (Q01851) POU domain, class 4, transcription factor 1| (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1) Length = 423 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/42 (42%), Positives = 18/42 (42%) Frame = -1 Query: 374 AGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 AGA G AA G G G G P G G GG PG G Sbjct: 129 AGAGGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGGPGGG 170
>K2C2_XENLA (P04265) Keratin, type II cytoskeletal I (Clone PUF164) (Fragment)| Length = 419 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = -1 Query: 398 GSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 GS ++ GA +GG +G G+ G G G G GG G G Sbjct: 291 GSSVYTALGGAAGGMGGGGGMGGGMGGGMGMGGGMGMGGGMGMGGGMGMG 340
>FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fibroin)| Length = 5263 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/44 (38%), Positives = 18/44 (40%) Frame = -1 Query: 374 AGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDA 243 AGA G A G G A AG G G+G G G G A Sbjct: 4471 AGAGSGAGAGAGSGAGAGSGAGAGSGAGAGYGAGYGAGAGSGAA 4514 Score = 29.3 bits (64), Expect = 4.3 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 374 AGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 AGA + G A G G AA+G G G G G G G Sbjct: 479 AGAGYGAGAGAGYGAGAGSGAASGAGAGSGAGAGSGAGAGSG 520 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 374 AGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 AGA + G A G G + G G G G GGA G G Sbjct: 307 AGAGYGAGAGAGAGAGYGAASGTGAGYGAGAGAGYGGASGAG 348 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 374 AGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 AGA + G A G G + AG G G G G A G G Sbjct: 245 AGAGYGAGAGAGAGAGYGAASGAGAGAGYGQGVGSGAASGAG 286 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/42 (38%), Positives = 16/42 (38%) Frame = -1 Query: 374 AGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 AGA G A G G A AG G G G G G G Sbjct: 2537 AGAGSGAGAGAGSGAGAGSGAGAGSGAGAGSGAGSGAGAGSG 2578 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/42 (38%), Positives = 17/42 (40%) Frame = -1 Query: 374 AGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 AGA + G A G G A AG G G G G G G Sbjct: 2208 AGAGYGAGAGAGYGAGYGAGAGAGYGAGAGSGAGSGAGAGSG 2249
>DNAK_HALMA (Q01100) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 635 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -1 Query: 368 ARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGD 246 A+ GG A GPG AAG G G G GGA +G+ Sbjct: 582 AQQAAGGAAGAGPG----GAAGPGGAAGPGGAAGGAAEQGE 618
>AL2S8_BOVIN (Q58CW6) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 8 protein homolog Length = 703 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%) Frame = -2 Query: 298 ENRVAMDKIVEV--LLEKETLSGDEFRAILSEFTEIPVE 188 +N VA+D++VEV + + ETL G+ R +L IP++ Sbjct: 636 QNLVAVDQLVEVEDVEDTETLEGNVHRILLGNVQTIPIQ 674
>SALA_DROSI (P21749) Protein spalt-accessory precursor| Length = 139 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -1 Query: 398 GSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGE 252 G ++ +G+ G GG A G G ++ G G P G G GG P E Sbjct: 56 GGQVGIGQGGVHPGQGGFA--GQGSPNQYQPGYGNPVGSGHFHGGNPVE 102
>Y2350_VIBVY (Q7MJ13) UPF0229 protein VV2350| Length = 423 Score = 29.3 bits (64), Expect = 4.3 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = -1 Query: 428 TERGRD----HADDGSEL-HVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGG 264 TE G D H D L H G+ G R R V PG D+ G+ R G GG Sbjct: 46 TETGEDVAIPHKDIKEPLFHQGKGGLRER------VHPG-NDQFITGDKIERPKGGQGGG 98 Query: 263 APGEGDA 243 G+GDA Sbjct: 99 GAGDGDA 105
>Y2091_VIBVU (P59353) UPF0229 protein VV1_2091| Length = 423 Score = 29.3 bits (64), Expect = 4.3 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = -1 Query: 428 TERGRD----HADDGSEL-HVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGG 264 TE G D H D L H G+ G R R V PG D+ G+ R G GG Sbjct: 46 TETGEDVAIPHKDIKEPLFHQGKGGLRER------VHPG-NDQFITGDKIERPKGGQGGG 98 Query: 263 APGEGDA 243 G+GDA Sbjct: 99 GAGDGDA 105
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 29.3 bits (64), Expect = 4.3 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = -1 Query: 425 ERGRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRG--HGQDRGGAPGE 252 +RG D + G+ G GG+ + G G DR+ G G RG +G DRGG G+ Sbjct: 518 DRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYG-GDRSGGGYGGDRGGGYGGDRGGYGGK 576
>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo| red hypersensitive protein 1) Length = 507 Score = 29.3 bits (64), Expect = 4.3 Identities = 22/61 (36%), Positives = 31/61 (50%) Frame = +3 Query: 189 STGISVNSDRMARNSSPLSVSFSRSTSTILSMATRFSLTCCSAISYAWSDSCFTAESMSS 368 S +V+S + SS SVS S STS S AT S+++ + S S F +S SS Sbjct: 331 SASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTATSSKTLASSSVTTSSSISSFEKQSSSS 390 Query: 369 A 371 + Sbjct: 391 S 391
>CLPB_CLOPE (Q8XKG8) Chaperone clpB| Length = 866 Score = 29.3 bits (64), Expect = 4.3 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = -2 Query: 310 QQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPV 191 ++++E +M+K E L KE ++ +E I+S++T IPV Sbjct: 516 RKIKEQEASMEKDNENALLKEEVTENEISEIISKWTGIPV 555
>RASA1_BOVIN (P09851) Ras GTPase-activating protein 1 (GTPase-activating| protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP) Length = 1044 Score = 29.3 bits (64), Expect = 4.3 Identities = 18/41 (43%), Positives = 21/41 (51%) Frame = -1 Query: 383 VGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGA 261 + EAG LGG AA+G G A + G P G G GGA Sbjct: 53 LAEAGVAATLGGGAALGSGFLG-AGSVAGTPGGVGLSAGGA 92
>FADJ_VIBCH (Q9KT58) Fatty acid oxidation complex alpha subunit [Includes:| Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)] Length = 708 Score = 29.3 bits (64), Expect = 4.3 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = -2 Query: 385 MSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVL---LEKETLSGDEFRA 221 + EKL + D K + DQA + Q+ R N A I+EV+ LEK +G E+ A Sbjct: 218 IKEKLLANTDLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEA 275
>CLPB_WOLPM (Q73IE4) Chaperone clpB| Length = 853 Score = 29.3 bits (64), Expect = 4.3 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = -2 Query: 313 LQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVEN 185 + Q+ +K+ + L+KE ++GD+ I+S++T IPV+N Sbjct: 508 IPQLENELKNQEKVTDSFLKKE-VTGDDIANIVSKWTGIPVDN 549
>WFS1_HUMAN (O76024) Wolframin| Length = 890 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = -1 Query: 353 GGEAAVGPGIRDRAAAGEGE---PRGHGQDRGGAPGEGDAE 240 G +A GPG+RD AA E + R + G P +GD E Sbjct: 45 GPQAGPGPGVRDAAAPAEPQAQHTRSRERADGTGPTKGDME 85
>RS2_BOVIN (O18789) 40S ribosomal protein S2 (Fragment)| Length = 286 Score = 28.9 bits (63), Expect = 5.7 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 240 G G R G G G+R G G RG G+ RGG G AE Sbjct: 8 GGPGMGGRGGFRGGFGSGVR-----GRGRGRGRGRGRGGGARGGKAE 49
>GCFC_HUMAN (Q9Y5B6) GC-rich sequence DNA-binding factor homolog| Length = 917 Score = 28.9 bits (63), Expect = 5.7 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 10/69 (14%) Frame = -1 Query: 425 ERGRDHADD--------GSELHVGEAGARHRLGGEAAVGPGIRDRAA--AGEGEPRGHGQ 276 ER RD + G+ G G GGE+ +GPG +A G G G G Sbjct: 20 ERERDEEQEPPPLLPPPGTGEEAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGF 79 Query: 275 DRGGAPGEG 249 G PG G Sbjct: 80 PGGAEPGNG 88
>BCHJ_RHOS4 (Q9Z5D7) Bacteriochlorophyll synthase 23 kDa chain (4-vinyl| reductase) Length = 206 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = -1 Query: 347 EAAVGPGIRDRAAAGEGEPRGHGQDRGGAP 258 EAA GPG DRA A G PR G + G P Sbjct: 31 EAAFGPGAADRALAAAGVPR-PGPESGMLP 59
>GRP1_PHAVU (P10495) Glycine-rich cell wall structural protein 1.0 precursor| (GRP 1.0) Length = 252 Score = 28.9 bits (63), Expect = 5.7 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 10/62 (16%) Frame = -1 Query: 404 DDGSELHVGEA-------GARHRLGGEAAV---GPGIRDRAAAGEGEPRGHGQDRGGAPG 255 +D LHVG G GG AAV G G + A GEG G+G GG G Sbjct: 31 EDRVNLHVGTVVGGYGGGGGSGGGGGGAAVELGGGGYGEGAGGGEGAGAGYGAAGGGHGG 90 Query: 254 EG 249 G Sbjct: 91 GG 92
>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)| Length = 1669 Score = 28.9 bits (63), Expect = 5.7 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +3 Query: 234 SPLSVSFSRSTSTILSMATRFSLTCCSAISYAWSDSCFTAESMSSAS 374 SPL ++ S S ST S T S T S+ S + S SC ++ S S+ + Sbjct: 662 SPLPIASSISGSTPASSITSTSCTSSSSSSASMSSSCSSSNSGSTTT 708
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 28.9 bits (63), Expect = 5.7 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 13/59 (22%) Frame = -1 Query: 380 GEAG-ARHRLGGEAAVGPGIRDRAAAGEGE------------PRGHGQDRGGAPGEGDA 243 G+ G R+ G + GPG AAAG G+ P G+GQ + G G G A Sbjct: 54 GQQGPGRYGPGQQGPSGPGSAAAAAAGSGQQGPGGYGPRQQGPGGYGQGQQGPSGPGSA 112
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)| Length = 1147 Score = 28.9 bits (63), Expect = 5.7 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -1 Query: 350 GEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G GPG+ G G P G G RGG G G Sbjct: 1004 GAGRGGPGMGGPGGPGRGGPGGPGAGRGGPGGPG 1037
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 28.9 bits (63), Expect = 5.7 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 20/67 (29%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEG--------------------EPRGHGQDRGGA 261 G G + + GG + G G +DR G G EPRG G RGG Sbjct: 192 GGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGR 251 Query: 260 PGEGDAE 240 G G ++ Sbjct: 252 GGMGGSD 258
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 28.9 bits (63), Expect = 5.7 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = -1 Query: 419 GRDHA--DDGSELHVGEAGARHRLGGEAAVGPG--IRDRAAAGE-GEPRGHGQDRGGAPG 255 G+D A D G+ GEAG G GPG +R G G P HG+D GAPG Sbjct: 269 GKDGAKGDSGAPGPKGEAGQPGANGSPGQPGPGGPTGERGRPGNPGGPGAHGKD--GAPG 326
>Y97_ADE07 (P05668) Hypothetical 9.7 kDa early protein| Length = 91 Score = 28.5 bits (62), Expect = 7.4 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -1 Query: 434 RCTERGRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAG 303 +C R +DG LH+GE G + EA VGPG+ A G Sbjct: 47 KCQLRYNPFGEDGL-LHLGEGGLKVVKVHEAVVGPGVDCVGAVG 89
>NLAL2_ARATH (Q9FK53) Putative H/ACA ribonucleoprotein complex subunit 1-like| protein 2 Length = 189 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -1 Query: 353 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 GG + G G RD G G RG G+ GG EG Sbjct: 6 GGGSFRGRGGRDNGGRGRGRGRGRGRFGGGNYDEG 40
>COAE_OCEIH (Q8EPE7) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 199 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = -2 Query: 412 IMRMMARNSMSEKLALDIDSAVKQLSDQA--YEIAL---QQVRENRVAMDKIVE 266 + R+M RN SEK ALD A L ++A +I + Q V E ++ +D +++ Sbjct: 141 LTRLMKRNEYSEKEALDRIKAQMSLKEKADLADIVIDNNQSVEETKLQLDNVLQ 194
>IF2_PROMT (Q46J13) Translation initiation factor IF-2| Length = 1183 Score = 28.5 bits (62), Expect = 7.4 Identities = 21/74 (28%), Positives = 37/74 (50%) Frame = -2 Query: 433 AAQSGDVIMRMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLE 254 AA SG VI+ + K A D + + + YE+ + + + ++AM+ ++E + Sbjct: 1029 AAASGAVIVGFNTSMASGAKRAADANG----VDVREYEVIYKLLEDIQLAMEGLLEPEMI 1084 Query: 253 KETLSGDEFRAILS 212 +E L E RAI S Sbjct: 1085 EEALGVAEVRAIFS 1098
>CCDC9_MOUSE (Q8VC31) Coiled-coil domain-containing protein 9| Length = 543 Score = 28.5 bits (62), Expect = 7.4 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%) Frame = -1 Query: 419 GRDHADDGSELHVGEA--GARHRLGGEAAVGPGIRDRAAAGEGEP 291 GR H G VG A G G + GPG R R G G P Sbjct: 92 GRTHPQQGGRAGVGRASQGWEDGAGEQLRGGPGGRGRRGRGRGSP 136
>ZCHC3_HUMAN (Q9NUD5) Zinc finger CCHC domain-containing protein 3| Length = 404 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -1 Query: 380 GEAGARHRLGGEAAVG-PGIRDRAAAGEGEPRGHGQDRGG 264 G G LGG A + P + D AG G+P+G +D G Sbjct: 67 GGGGGSAGLGGPAGLAAPDLGDFPPAGRGDPKGRRRDPAG 106
>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;| Lipovitellin LV-1C; Lipovitellin LV-2] Length = 1823 Score = 28.5 bits (62), Expect = 7.4 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +3 Query: 195 GISVNSDRMARNSSPLSVSFSRSTSTILSMATRFSLTCCSAISYAWSDSCFTAESMSSAS 374 G +S + +SS S S S+S ST+ TR S+ S + SDS ++ S SS+S Sbjct: 1214 GPQSHSSSSSSSSSSSSSSASKSFSTVKPPMTRKPRPARSSSSSSSSDSSSSSSSSSSSS 1273 Query: 375 FS 380 S Sbjct: 1274 SS 1275
>UBP47_MOUSE (Q8BY87) Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15)| (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) Length = 1376 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -2 Query: 361 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVEN 185 +D K S I ++ R + +D E++LE ++ DE R LSE + IP+E+ Sbjct: 1214 LDGVEKMKSMSQLAILTRRWRPAEMKLDPFQELVLESNSV--DELREKLSEISGIPLED 1270
>EXON_HHV2 (P06489) Alkaline exonuclease (EC 3.1.11.-)| Length = 620 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/41 (43%), Positives = 19/41 (46%) Frame = -1 Query: 365 RHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDA 243 RHR G E G+ R G G P G RGGAPG A Sbjct: 519 RHRAGAEE----GVTFRLEDGRGAPAG----RGGAPGPAKA 551
>CLPB_CHLPN (Q7AJA9) Chaperone clpB| Length = 866 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -2 Query: 409 MRMMARNSMSEKLALDID-SAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGD 233 MR +A+ + ++ L D S + LS+Q Y+ A R+ K+V +LL K L GD Sbjct: 783 MRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVV-ILLSKALLKGD 841
>IF2_PROMA (Q7VA20) Translation initiation factor IF-2| Length = 1134 Score = 28.5 bits (62), Expect = 7.4 Identities = 21/74 (28%), Positives = 38/74 (51%) Frame = -2 Query: 433 AAQSGDVIMRMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLE 254 AA SG VI+ + K A D +S + + YE+ + + + ++AM+ ++E L Sbjct: 980 AAASGAVIIGFNTSMASGAKKAADANS----VDVRDYEVIYKLLEDIQLAMEGLLEPDLV 1035 Query: 253 KETLSGDEFRAILS 212 +E + E RAI + Sbjct: 1036 EEKIGEAEVRAIFT 1049
>ERME_SACER (P07287) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (Erythromycin resistance protein) (NMT) Length = 370 Score = 28.5 bits (62), Expect = 7.4 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -1 Query: 419 GRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDR-GGAPGE 252 GRDH D G + R G G RDR A+G G+ R G++R G GE Sbjct: 291 GRDHGDR-------RTGGQDR-GDRRTGGRDHRDRQASGHGDRRSSGRNRDDGRTGE 339
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.5 bits (62), Expect = 7.4 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGE--PRGHGQDRG-----GAPG 255 G+AG R G AVGP +D A +G P G +RG G+PG Sbjct: 582 GKAGERGLPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPG 630
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 28.5 bits (62), Expect = 7.4 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGH--GQDRGGAPGEG 249 G AGA G A G G A G G RG G+ RGG+ G G Sbjct: 301 GGAGAGGAGGAGAGGGAGAGGAGAGGGGRGRGGSGGRGRGGSGGRG 346
>K2C6G_MOUSE (Q9R0H5) Keratin, type II cytoskeletal 6G (Cytokeratin-6G) (CK 6G)| (K6g keratin) (Keratin-K6irs) (mK6irs1/Krt2-6g) Length = 524 Score = 28.5 bits (62), Expect = 7.4 Identities = 22/78 (28%), Positives = 32/78 (41%) Frame = -2 Query: 430 AQSGDVIMRMMARNSMSEKLALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEK 251 AQ I M SM LD+DS + ++ Q EIAL+ E + L Sbjct: 275 AQIQSHISDMSVILSMDNNRNLDLDSIIDEVRAQYEEIALKSKAEAEALYQTKFQELQLA 334 Query: 250 ETLSGDEFRAILSEFTEI 197 GD+ + +E TE+ Sbjct: 335 AGRHGDDLKNTKNEITEL 352
>GRP1_ARATH (P27483) Glycine-rich cell wall structural protein precursor| Length = 349 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G AG +GG A G G AG G GHG GG G G Sbjct: 73 GGAGGGGGIGGGAGGGAGGGLGGGAGGGLGGGHGGGIGGGAGGG 116
>HCLS1_MOUSE (P49710) Hematopoietic lineage cell-specific protein (Hematopoietic| cell-specific LYN substrate 1) (LckBP1) Length = 486 Score = 28.5 bits (62), Expect = 7.4 Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 12/68 (17%) Frame = -1 Query: 416 RDHADDGS---------ELHVGEAGARHRLGGEAAVGPGIRDRAAAG---EGEPRGHGQD 273 RD AD + E H + H GG V RD+AA G +GE H Sbjct: 128 RDRADKSAVGFDYKGEVEKHASQKDYSHGFGGRYGVEKDKRDKAALGYDYKGETEKHESQ 187 Query: 272 RGGAPGEG 249 R A G G Sbjct: 188 RDYAKGFG 195
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGE--PRGHGQDRG-----GAPG 255 G+AG R G AVGP +D A +G P G +RG G+PG Sbjct: 589 GKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPG 637
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGE--PRGHGQDRG-----GAPG 255 G+AG R G AVGP +D A +G P G +RG G+PG Sbjct: 158 GKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPG 206
>GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1 precursor| Length = 384 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/44 (38%), Positives = 17/44 (38%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 249 G AG LGG G G A G G G G GG G G Sbjct: 93 GGAGGGGGLGGGGGAGGGFGGGAGGGAGGGLGGGGGLGGGGGGG 136
>VP10_BPPRD (P28732) Protein P10| Length = 203 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -1 Query: 419 GRDHADDGSELHVGEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAP 258 G+ DG + +AG+ + + G A + PG A+ G G G G D G P Sbjct: 3 GKSSNGDGVKF-ADDAGSGNSIDGIAIIDPGTVTSASGGSGSDAGSG-DSGNTP 54
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)| (Protein kinase A interference protein) Length = 376 Score = 28.1 bits (61), Expect = 9.7 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = +3 Query: 189 STGISVNSDRMARNSSPLSVSFSRSTSTILSMATRFSLTCCSAISYAWSDSCFTAESMSS 368 ST I+ S SS S S S S S+ S ++ FS++ SA S + + S T+ S SS Sbjct: 87 STSIASISFTSFSFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSS 146 Query: 369 ASFSDMEFRAIIRMITS 419 + S + ITS Sbjct: 147 SLSSTPSSSSSPSTITS 163
>AFRP_STRGR (Q9ZN78) A-factor receptor protein (A-factor-binding protein)| Length = 276 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -1 Query: 353 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 240 G +AA G R + G G G GGA EGD E Sbjct: 226 GSDAATDSGSRSGGSGLRGGGSGRGPRAGGAGDEGDEE 263
>GAR1_ASHGO (Q757V8) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein| GAR1) Length = 212 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = -1 Query: 380 GEAGARHRLGGEAAV--GPGIRDRAAAGEGEPRGHGQDRGGAPGEGDA 243 G G+R GG G G R A G G G G RGG G G A Sbjct: 152 GRGGSRGGFGGRGGARGGFGGRGGARGGFGGFGGRGGSRGGFGGRGGA 199
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +3 Query: 189 STGISVNSDRMARNSSPLSVSFSRSTSTILSMATRFSLTCCSAISYAWSDSCFTAESMSS 368 +T S++S + SS S S S STS+ S +T S ++ + S S ++ +S Sbjct: 352 TTSSSISSTTSSTTSSTSSSSTSSSTSSTTSSSTTSSQISTTSTAPTSSTSLSSSTISTS 411 Query: 369 ASFSD 383 AS SD Sbjct: 412 ASTSD 416
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGD 246 G AG R G E+ P A G P G G GG+PG G+ Sbjct: 69 GTAGEPRRPGAESRRSPAAA-APAPGAPVPGGGGGGGGGSPGRGE 112
>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) Length = 477 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -1 Query: 377 EAGARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 240 +AG R G VGP +++ A GE + G GG GEG E Sbjct: 115 KAGGCCRPGELGPVGPDEKEKGAGAGGEEK-KGAGEGGKDGEGGKE 159
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGE--PRGHGQDRG-----GAPG 255 G+AG R G AVGP +D A +G P G +RG G+PG Sbjct: 582 GKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPG 630
>AL2S8_HUMAN (Q8N187) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 8 protein (Calcium-response factor) (CaRF) (Protein NYD-SP24) Length = 725 Score = 28.1 bits (61), Expect = 9.7 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%) Frame = -2 Query: 403 MMARNSM--SEKLALDIDSAVKQLSDQAYEIA-LQQVRENRVAMDKIVEVLLEKET--LS 239 +M NS+ + +L D+ + Q + A + L + +N VAMD++VEV ++T L Sbjct: 602 VMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLE 661 Query: 238 GDEFRAILSEFTEIPVE 188 G R +L + IP++ Sbjct: 662 GTVHRILLGDVQTIPIQ 678
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Frame = -1 Query: 380 GEAGARHRLGGEAAVGPGIRDRAAAGEGE--PRGHGQDRG-----GAPG 255 G+AG R G AVGP +D A +G P G +RG G+PG Sbjct: 593 GKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPG 641 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,170,943 Number of Sequences: 219361 Number of extensions: 727587 Number of successful extensions: 5495 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 4177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5396 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
