ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61o14 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 268 bits (685), Expect = 7e-72 Identities = 130/133 (97%), Positives = 131/133 (98%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV Sbjct: 332 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 391 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 165 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP Sbjct: 392 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 451 Query: 164 TARSDDGSCLYTF 126 TARSDDGSCLYTF Sbjct: 452 TARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 209 bits (531), Expect = 5e-54 Identities = 100/133 (75%), Positives = 116/133 (87%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV Sbjct: 342 IDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLV 401 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 165 EQ+NVKRVQLA+TY+SQAALGDAN DA+ G+FYGKGAQQ LPVPEGCTD A+N+DP Sbjct: 402 MEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDP 461 Query: 164 TARSDDGSCLYTF 126 TARSDDG+C+Y F Sbjct: 462 TARSDDGTCVYNF 474
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 207 bits (526), Expect = 2e-53 Identities = 96/131 (73%), Positives = 114/131 (87%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVY DEVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLV Sbjct: 340 IDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLV 399 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 165 QEQ+NVKRVQLAD YMS AALGDAN+DA+ G+F+GK AQQ +LPV +GCTD AKNYDP Sbjct: 400 QEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDP 459 Query: 164 TARSDDGSCLY 132 TARSDDGSC Y Sbjct: 460 TARSDDGSCTY 470
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 201 bits (512), Expect = 8e-52 Identities = 97/135 (71%), Positives = 112/135 (82%), Gaps = 2/135 (1%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVY DEVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLV Sbjct: 342 IDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLV 401 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNY 171 QEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG A Q G +PVPEGCTD A NY Sbjct: 402 QEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNY 461 Query: 170 DPTARSDDGSCLYTF 126 DPTARSDDGSC+Y F Sbjct: 462 DPTARSDDGSCVYKF 476
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 166 bits (421), Expect = 3e-41 Identities = 78/97 (80%), Positives = 88/97 (90%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLV Sbjct: 329 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 388 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 234 QEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYGK Sbjct: 389 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 164 bits (414), Expect = 2e-40 Identities = 77/96 (80%), Positives = 88/96 (91%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV Sbjct: 332 IDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLV 391 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 237 +EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG Sbjct: 392 KEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 158 bits (399), Expect = 1e-38 Identities = 73/96 (76%), Positives = 87/96 (90%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLV Sbjct: 342 IDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLV 401 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 237 QEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG Sbjct: 402 QEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 155 bits (393), Expect = 5e-38 Identities = 71/95 (74%), Positives = 87/95 (91%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV Sbjct: 338 IDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLV 397 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240 EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+ Sbjct: 398 AEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 151 bits (382), Expect = 1e-36 Identities = 70/94 (74%), Positives = 85/94 (90%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV Sbjct: 342 IDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLV 401 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 243 +EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F Sbjct: 402 EEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 150 bits (379), Expect = 2e-36 Identities = 73/94 (77%), Positives = 83/94 (88%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLV Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLV 405 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 243 QEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F Sbjct: 406 QEQENVKRVQLAETYLKEAALGDANADAINTGNF 439
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 150 bits (379), Expect = 2e-36 Identities = 72/95 (75%), Positives = 82/95 (86%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLV Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLV 405 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240 QEQ+NVKRVQLAD Y+ +AALGDAN DA+ GSF+ Sbjct: 406 QEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 150 bits (378), Expect = 3e-36 Identities = 72/92 (78%), Positives = 83/92 (90%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLV Sbjct: 341 IDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLV 400 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTG 249 QEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG Sbjct: 401 QEQENVKRVQLAETYLKEAALGDANADAINTG 432
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 144 bits (362), Expect = 2e-34 Identities = 64/95 (67%), Positives = 86/95 (90%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLV Sbjct: 344 IDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLV 403 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240 QEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+ Sbjct: 404 QEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 143 bits (360), Expect = 3e-34 Identities = 64/95 (67%), Positives = 85/95 (89%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Y MLV Sbjct: 346 IDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLV 405 Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240 QEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+ Sbjct: 406 QEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 108 bits (270), Expect = 9e-24 Identities = 50/71 (70%), Positives = 60/71 (84%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDDEVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV Sbjct: 339 IDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLV 398 Query: 344 QEQDNVKRVQL 312 EQ+NVKRV+L Sbjct: 399 MEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 87.4 bits (215), Expect = 2e-17 Identities = 44/81 (54%), Positives = 58/81 (71%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F GALRARVYDD VR+W+ TG++ IG++LVN+R V + M + L++YG LV Sbjct: 315 IDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLV 373 Query: 344 QEQDNVKRVQLADTYMSQAAL 282 EQ+NVKRVQLAD Y+S A L Sbjct: 374 DEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 68.6 bits (166), Expect = 1e-11 Identities = 29/75 (38%), Positives = 48/75 (64%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F ALR+R+YD+++R ++ G EN+ R+VNS +GP F++P T+ L+E + +V Sbjct: 215 IDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMV 274 Query: 344 QEQDNVKRVQLADTY 300 EQ ++ QL D Y Sbjct: 275 AEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 62.0 bits (149), Expect = 1e-09 Identities = 28/75 (37%), Positives = 46/75 (61%) Frame = -1 Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345 + F ALR+R+YD ++R ++ G E I R+VNS + P F++P ++ L+E G++++ Sbjct: 215 IDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVL 274 Query: 344 QEQDNVKRVQLADTY 300 EQ V QL D Y Sbjct: 275 GEQQRVDNSQLVDEY 289
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 2.5 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +1 Query: 199 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 375 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 376 STVI 387 I Sbjct: 302 QAFI 305
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 30.8 bits (68), Expect = 2.5 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 419 RDGPVTFEQPKMTVEK 372 R+GP TFEQP MT+EK Sbjct: 17 REGPPTFEQPAMTIEK 32
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 4.2 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +1 Query: 304 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 408 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial| protein Length = 442 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -3 Query: 252 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 145 +FL R RS R AR R K Q LRPNG E+RR Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169
>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier| family 20 member 1-B) Length = 685 Score = 29.6 bits (65), Expect = 5.5 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +3 Query: 129 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 302 G++ ++AP W++VLG ++ F G + + SF GT++ +V++ Q+C+ Sbjct: 15 GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69 Query: 303 GVSKLHTLDIVLL 341 S T+ VLL Sbjct: 70 -ASIFETVGSVLL 81
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 5.5 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1 Query: 470 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 363 W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 7.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 7.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 7.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 7.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 7.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 7.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 7.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 7.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>PBPB_BACSU (Q07868) Penicillin-binding protein 2B (PBP-2B)| Length = 716 Score = 28.9 bits (63), Expect = 9.3 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -1 Query: 488 DDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPK 387 D+E + G+ G+E + + + RDG VT+E K Sbjct: 186 DEETNEISGAMGLEKVLDKYLKERDGYVTYESDK 219
>PTPRZ_HUMAN (P23471) Receptor-type tyrosine-protein phosphatase zeta precursor| (EC 3.1.3.48) (R-PTP-zeta) Length = 2314 Score = 28.9 bits (63), Expect = 9.3 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 12/106 (11%) Frame = -1 Query: 485 DEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQE---QDNVKRVQ 315 +E+ + V S+ EN+ N VT+E+P++ + ++E +L Q+ +D K Sbjct: 304 EEIHEAVCSSEPENVQADPENYTSLLVTWERPRVVYDTMIEKFAVLYQQLDGEDQTKHEF 363 Query: 314 LADTYMSQAALGD---ANQD------AMKTGSFYGKGAQQGTLPVP 204 L D Y A+ + N A+ T YGK + Q + +P Sbjct: 364 LTDGYQDLGAILNNLLPNMSYVLQIVAICTNGLYGKYSDQLIVDMP 409 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,122,188 Number of Sequences: 219361 Number of extensions: 1435662 Number of successful extensions: 4112 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4011 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4110 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
