>gb|AY398372.1| Danio rerio clone RK138A4C07 charged multivesicular body protein
            1/chromatin modifying protein 1 (KM0004) mRNA, complete
            cds
          Length = 1569

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 146  tgatgtgtgtttctgtcatcaa 167
            ||||||||||||||||||||||
Sbjct: 1502 tgatgtgtgtttctgtcatcaa 1523

>gb|AY391433.1| Danio rerio karyopherin alpha 3 (KPNA3) mRNA, complete cds
          Length = 2236

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 146  tgatgtgtgtttctgtcatcaa 167
            ||||||||||||||||||||||
Sbjct: 2164 tgatgtgtgtttctgtcatcaa 2185

>ref|NM_201320.1| Danio rerio karyopherin (importin) alpha 3 (kpna3), mRNA
          Length = 2236

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 146  tgatgtgtgtttctgtcatcaa 167
            ||||||||||||||||||||||
Sbjct: 2164 tgatgtgtgtttctgtcatcaa 2185

>gb|BT019230.1| Zea mays clone Contig903.F mRNA sequence
          Length = 727

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 106/134 (79%)
 Strand = Plus / Minus

                                                                       
Query: 269 cttctcgccattgaccaggatgagggggacgtattctagaaccattctcttacactcctg 328
           |||||| || || |||| ||||||||| | |||||  |||||||  ||||| |||| |||
Sbjct: 725 cttctcaccgttcaccaagatgaggggaatgtattgcagaaccagcctcttgcactgctg 666

                                                                       
Query: 329 cacatgaccgtgaaccttgttgcactccttgatgagaagttgaagtatctcaaactgcga 388
            || ||||| |  | ||| |||||||||||||  ||||  |||| ||||||||||| || 
Sbjct: 665 gacgtgaccttcgatcttattgcactccttgacaagaatctgaattatctcaaactccgc 606

                         
Query: 389 gtcaggatctttca 402
            || ||||||||||
Sbjct: 605 atctggatctttca 592

>gb|BC067665.1| Danio rerio procollagen (type III) N-endopeptidase, mRNA (cDNA clone
            MGC:85863 IMAGE:6965846), complete cds
          Length = 1604

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 146  tgatgtgtgtttctgtcatcaa 167
            ||||||||||||||||||||||
Sbjct: 1534 tgatgtgtgtttctgtcatcaa 1555

>gb|BC056577.1| Danio rerio procollagen (type III) N-endopeptidase, mRNA (cDNA clone
            MGC:65914 IMAGE:6789243), complete cds
          Length = 1380

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 146  tgatgtgtgtttctgtcatcaa 167
            ||||||||||||||||||||||
Sbjct: 1232 tgatgtgtgtttctgtcatcaa 1253

>ref|NM_200563.2| Danio rerio procollagen (type III) N-endopeptidase (pcoln3), mRNA
          Length = 1569

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 146  tgatgtgtgtttctgtcatcaa 167
            ||||||||||||||||||||||
Sbjct: 1502 tgatgtgtgtttctgtcatcaa 1523

>gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, complete sequence
          Length = 179782

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 151  tgtgtttctgtcatcaagcat 171
            |||||||||||||||||||||
Sbjct: 7802 tgtgtttctgtcatcaagcat 7822

>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence
          Length = 188569

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    tgtgtttctgtcatcaagcat 171
              |||||||||||||||||||||
Sbjct: 180772 tgtgtttctgtcatcaagcat 180792

>ref|XM_369824.1| Magnaporthe grisea 70-15 hypothetical protein (MG06339.4) partial
           mRNA
          Length = 2748

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 259 tctcaaggagcttctcgccattga 282
           |||||||||| |||||||||||||
Sbjct: 295 tctcaaggaggttctcgccattga 272

>emb|CR376756.10| Zebrafish DNA sequence from clone CH211-87A15 in linkage group 23,
              complete sequence
          Length = 203373

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    ttgatgagaagttgaagtat 376
              ||||||||||||||||||||
Sbjct: 118508 ttgatgagaagttgaagtat 118489

>gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC T22K18 genomic sequence,
             complete sequence
          Length = 96232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ttccaaagaacagagacaag 94
             ||||||||||||||||||||
Sbjct: 33984 ttccaaagaacagagacaag 33965

>emb|CR361545.10| Zebrafish DNA sequence from clone DKEY-45K13 in linkage group 23,
             complete sequence
          Length = 112007

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   ttgatgagaagttgaagtat 376
             ||||||||||||||||||||
Sbjct: 13904 ttgatgagaagttgaagtat 13923

>gb|AC113272.11| Mus musculus chromosome 1, clone RP23-379C24, complete sequence
          Length = 170622

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    ttctgtcatcaagcatcact 175
              ||||||||||||||||||||
Sbjct: 144308 ttctgtcatcaagcatcact 144327

>gb|AC163009.2| Mus musculus chromosome 1, clone RP23-268A12, complete sequence
          Length = 147135

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   ttctgtcatcaagcatcact 175
             ||||||||||||||||||||
Sbjct: 61063 ttctgtcatcaagcatcact 61082

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    aacaatcacctcatcaccct 125
              ||||||||||||||||||||
Sbjct: 245382 aacaatcacctcatcaccct 245363

>emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in linkage group 14 Contains
              part of a novel gene similar to ATP8B1 (ATPase, Class I,
              type 8B, member 1), part of a novel gene similar to MCF2
              (MCF.2 cell line derived transforming sequence) and two CpG
              islands, complete sequence
          Length = 174521

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    ttgatgagaagttgaagtat 376
              ||||||||||||||||||||
Sbjct: 143270 ttgatgagaagttgaagtat 143251

>gb|AY128505.1| Drosophila melanogaster SD07147 full insert cDNA
          Length = 5356

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  gccattgaccaggatgaggg 294
            ||||||||||||||||||||
Sbjct: 2383 gccattgaccaggatgaggg 2402

>gb|AC011378.7| Homo sapiens chromosome 5 clone CTB-128B4, complete sequence
          Length = 112357

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ttccaaagaacagagacaag 94
             ||||||||||||||||||||
Sbjct: 31070 ttccaaagaacagagacaag 31051

>ref|NM_169440.1| Drosophila melanogaster Cad87A CG6977-RA (Cad87A), mRNA
          Length = 6673

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  gccattgaccaggatgaggg 294
            ||||||||||||||||||||
Sbjct: 3709 gccattgaccaggatgaggg 3728

>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 265     ggagcttctcgccattgacc 284
               ||||||||||||||||||||
Sbjct: 1232631 ggagcttctcgccattgacc 1232612

>gb|AC158515.2| Mus musculus BAC clone RP24-487D11 from chromosome 9, complete sequence
          Length = 176590

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 387    gagtcaggatctttcatttttgag 410
              |||||||| |||||||||||||||
Sbjct: 104822 gagtcagggtctttcatttttgag 104799

>gb|AC008307.7|AC008307 Drosophila melanogaster, chromosome 3R, region 86F-87A, BAC clone
              BACR03D22, complete sequence
          Length = 157189

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    gccattgaccaggatgaggg 294
              ||||||||||||||||||||
Sbjct: 123602 gccattgaccaggatgaggg 123583

>emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in linkage group 14,
              complete sequence
          Length = 166194

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    ttgatgagaagttgaagtat 376
              ||||||||||||||||||||
Sbjct: 112864 ttgatgagaagttgaagtat 112883

>gb|AC007725.5|AC007725 Drosophila melanogaster, chromosome 3R, region 87A-87A, BAC clone
             BACR03N24, complete sequence
          Length = 144152

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   gccattgaccaggatgaggg 294
             ||||||||||||||||||||
Sbjct: 73321 gccattgaccaggatgaggg 73302

>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 154     gtttctgtcatcaagcatcactcc 177
               ||||||||||||||||| ||||||
Sbjct: 2497122 gtttctgtcatcaagcaccactcc 2497145

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    aacaatcacctcatcaccct 125
              ||||||||||||||||||||
Sbjct: 295216 aacaatcacctcatcaccct 295197

>emb|AJ336430.1|HSA336430 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-4AF6RS
          Length = 732

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 attgaccaggatgagggggacgta 301
           |||||||||||||||| |||||||
Sbjct: 338 attgaccaggatgaggcggacgta 361

>emb|AJ336226.1|HSA336226 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-EF13RS
          Length = 708

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 attgaccaggatgagggggacgta 301
           |||||||||||||||| |||||||
Sbjct: 338 attgaccaggatgaggcggacgta 361

>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the complete
              sequence
          Length = 226782

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    gccattgaccaggatgaggg 294
              ||||||||||||||||||||
Sbjct: 145681 gccattgaccaggatgaggg 145662

>emb|AL929117.7| Mouse DNA sequence from clone RP23-442K5 on chromosome 2, complete
              sequence
          Length = 161940

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    aggatctttcatttttgaga 411
              ||||||||||||||||||||
Sbjct: 151923 aggatctttcatttttgaga 151942

>emb|CT010509.10| Mouse DNA sequence from clone RP23-63E8 on chromosome 9, complete
             sequence
          Length = 258170

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 387   gagtcaggatctttcatttttgag 410
             |||||||| |||||||||||||||
Sbjct: 30587 gagtcagggtctttcatttttgag 30610


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,370,222
Number of Sequences: 3902068
Number of extensions: 4370222
Number of successful extensions: 77744
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77647
Number of HSP's gapped (non-prelim): 97
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)