ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61o21 |
|---|---|
| Clone Library Name | barley_pub |
>TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein| Length = 507 Score = 93.2 bits (230), Expect = 6e-19 Identities = 43/110 (39%), Positives = 66/110 (60%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 ++ FT + A + + PL+ +SI L+ Q +LSGVA G GWQ + A NLV +Y IG+ Sbjct: 381 SKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGL 440 Query: 393 PLAILFAFKLNFYTKGLWSGLICGLTCQTSTLVVITARTKWSKIVDAMRQ 244 P+ + FK + G+W G+I G+ QT TL+V+T +T W+ V+ Q Sbjct: 441 PIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWTSEVENAAQ 490
>YAO6_SCHPO (Q10085) Hypothetical protein C11D3.06 in chromosome I| Length = 455 Score = 56.2 bits (134), Expect = 8e-08 Identities = 31/103 (30%), Positives = 47/103 (45%) Frame = -3 Query: 579 LWARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFI 400 ++ R+FT + A + PL+ + DS G + G RG G Q + A+ N+ A+Y Sbjct: 332 IYGRIFTNDPDVIQLVALVMPLVAAFQISDSLNGTMGGALRGTGRQKVGAIVNITAYYLF 391 Query: 399 GMPLAILFAFKLNFYTKGLWSGLICGLTCQTSTLVVITARTKW 271 +PL I AF GLW G + L+ + I T W Sbjct: 392 ALPLGIYLAFHGKGLV-GLWIGQVIALSIVGILELKIVMATDW 433
>YD338_YEAST (Q05497) Hypothetical 77.8 kDa protein in MRPS28-HXT7 intergenic| region Length = 695 Score = 52.8 bits (125), Expect = 8e-07 Identities = 27/91 (29%), Positives = 44/91 (48%) Frame = -3 Query: 603 CFWASATGLWARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALT 424 C L A +++ + A + PL+ I DS V RG G Q L ++ Sbjct: 546 CILVFGRNLIANIYSKDPEVIKLIAQVLPLVGIVQNFDSLNAVAGSCLRGQGMQSLGSIV 605 Query: 423 NLVAFYFIGMPLAILFAFKLNFYTKGLWSGL 331 NL+A+Y G+PLA++ ++ + GLW G+ Sbjct: 606 NLMAYYLFGIPLALILSWFFDMKLYGLWIGI 636
>NORM_RHILO (Q98D15) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/76 (31%), Positives = 39/76 (51%) Frame = -3 Query: 498 VLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGL 319 V D AQ V +G+ RG + + + ++ +G+PL +L AF F+ G+W GL GL Sbjct: 383 VFDGAQAVAAGMLRGLHDTKVPMIYAAIGYWGVGLPLGVLLAFHFGFHGVGIWIGLSSGL 442 Query: 318 TCQTSTLVVITARTKW 271 + L+ T+W Sbjct: 443 AVVAALLL-----TRW 453
>NORM_XYLFT (Q879Z5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 469 Score = 47.0 bits (110), Expect = 5e-05 Identities = 26/83 (31%), Positives = 44/83 (53%) Frame = -3 Query: 564 FTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLA 385 +T V+A+ + + I D Q + SGV RG + L +++++ +GMPL Sbjct: 365 YTDDLVVASLASKLLLFAAIFQFPDGLQMLSSGVLRGMKDTRVPMLLAMISYWGLGMPLG 424 Query: 384 ILFAFKLNFYTKGLWSGLICGLT 316 + F L + ++G+W GLI GLT Sbjct: 425 LGLGFALEWNSRGMWIGLIIGLT 447
>NORM_XYLFA (Q9PA34) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 469 Score = 47.0 bits (110), Expect = 5e-05 Identities = 26/83 (31%), Positives = 44/83 (53%) Frame = -3 Query: 564 FTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLA 385 +T V+A+ + + I D Q + SGV RG + L +++++ +GMPL Sbjct: 365 YTDDLVVASLASKLLLFAAIFQFPDGLQMLSSGVLRGMKDTRVPMLLAMISYWGLGMPLG 424 Query: 384 ILFAFKLNFYTKGLWSGLICGLT 316 + F L + ++G+W GLI GLT Sbjct: 425 LGLGFALEWNSRGMWIGLIIGLT 447
>NORM_AGRT5 (Q8UDF5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 465 Score = 46.2 bits (108), Expect = 8e-05 Identities = 25/85 (29%), Positives = 45/85 (52%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 + A +++ + I ++D Q V +G+ RG + A+ L++++ IG+ LA AF Sbjct: 367 VLAYASSLVVIAGIFQLVDGIQAVTAGLLRGLKDARIPAMLALISYWPIGLALAWTMAFP 426 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVV 292 L F +G+W G + GL+ L V Sbjct: 427 LGFGGRGVWFGFVIGLSTAAVLLTV 451
>NORM_BRUSU (Q8G2I1) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/94 (28%), Positives = 44/94 (46%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A F A+ L I +D AQ V +G+ RG + L L ++ +G+PL + AF+ Sbjct: 375 LAVTFLALAALFQI---VDGAQAVAAGMLRGLRDTRIPMLLALFGYWGVGLPLGAVLAFQ 431 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVVITARTKWSK 265 G+W GL GL +V + +W + Sbjct: 432 FGMGGVGIWLGLAAGL-----GMVAVLMTIRWRR 460
>NORM_BRUME (Q8YFD7) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/94 (28%), Positives = 44/94 (46%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A F A+ L I +D AQ V +G+ RG + L L ++ +G+PL + AF+ Sbjct: 375 LAVTFLALAALFQI---VDGAQAVAAGMLRGLRDTRIPMLLALFGYWGVGLPLGAVLAFQ 431 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVVITARTKWSK 265 G+W GL GL +V + +W + Sbjct: 432 FGMGGVGIWLGLAAGL-----GMVAVLMTIRWRR 460
>NORM_BACCR (Q81G28) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 452 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/85 (31%), Positives = 42/85 (49%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A EF L IS D+ + G RG ++A + L+A++ IG+PL + A Sbjct: 356 LAKEFLIFAILFQIS---DAIATPVQGALRGYKDVNVALIMTLIAYWIIGLPLGYILATY 412 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVV 292 + KG W GLI GL + L++ Sbjct: 413 TEWAAKGYWIGLIIGLAFGAAFLLI 437
>NORM_PSEPK (Q88CB9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 462 Score = 45.4 bits (106), Expect = 1e-04 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = -3 Query: 543 AAEFAAITPLMMISI---VLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFA 373 AA F L+M++ + D Q + G RG L LV ++ +G P A LF Sbjct: 353 AAIFQVAVQLLMVAAWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFT 412 Query: 372 FKLNFYTKGLWSGLICGLTCQTSTLVVITARTKW 271 F L G+W GL GL C V +T +W Sbjct: 413 FTLGGGAVGIWWGLALGLAC---AAVALTFGFEW 443
>NORM_BACHK (Q6HLG9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/85 (31%), Positives = 43/85 (50%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A EF L IS D+ + G RG ++A + L+A++ IG+PL + A Sbjct: 356 LAKEFLIFAILFQIS---DAIATPVQGALRGYKDVNVALIMTLIAYWVIGLPLGYILATY 412 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVV 292 ++ KG W GLI GL + L++ Sbjct: 413 TDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_BACCZ (Q63DZ4) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/85 (31%), Positives = 43/85 (50%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A EF L IS D+ + G RG ++A + L+A++ IG+PL + A Sbjct: 356 LAKEFLIFAILFQIS---DAIATPVQGALRGYKDVNVALIMTLIAYWVIGLPLGYILATY 412 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVV 292 ++ KG W GLI GL + L++ Sbjct: 413 TDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_BACAN (Q81T85) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/85 (31%), Positives = 43/85 (50%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A EF L IS D+ + G RG ++A + L+A++ IG+PL + A Sbjct: 356 LAKEFLIFAILFQIS---DAIATPVQGALRGYKDVNVALIMTLIAYWVIGLPLGYILATY 412 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVV 292 ++ KG W GLI GL + L++ Sbjct: 413 TDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_PSEAE (Q9HTR0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 488 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = -3 Query: 498 VLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGL 319 + D Q V G RG L L ++ +G+PLA L AF + G+W GL GL Sbjct: 371 LFDGTQNVAMGAIRGLKDARTTFLVGLACYWLVGVPLACLLAFAAGWGAAGVWWGLAGGL 430 Query: 318 TC 313 C Sbjct: 431 AC 432
>NORM_BACC1 (Q73BB8) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 454 Score = 44.3 bits (103), Expect = 3e-04 Identities = 26/85 (30%), Positives = 43/85 (50%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A EF L IS D+ + G RG +++ + L+A++ IG+PL + A Sbjct: 356 LAKEFLIFAILFQIS---DAIATPVQGALRGYKDVNVSLIMTLIAYWVIGLPLGYILATY 412 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVV 292 ++ KG W GLI GL + L++ Sbjct: 413 TDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_RHOPA (Q6NB79) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 474 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Frame = -3 Query: 570 RLFTGSEVIAAEFAAITPLMMIS----IVLDSAQGVLSGVARGCGWQHLAALTNLVAFYF 403 +LF G + E A +T ++I + D Q V +G RG + L ++ F+ Sbjct: 362 QLFLGDSDTSIETATLTAALLIVGASFFIADGLQVVANGALRGRNDTKVPLLFAVLGFWV 421 Query: 402 IGMPLAILFAFKLNFYTKGLWSGLICGLTCQTSTLV 295 IG P + F + G+W GL GL + LV Sbjct: 422 IGFPFCWVLGFHTDLGPFGVWIGLAVGLVVYAALLV 457
>NORM_DEIRA (Q9RY44) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 451 Score = 40.4 bits (93), Expect = 0.004 Identities = 25/83 (30%), Positives = 39/83 (46%) Frame = -3 Query: 543 AAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKL 364 A F +I L + +D Q +G RG + L +LVA++ +G+ L + + Sbjct: 359 ATGFLSIAALFQL---MDGLQVTANGALRGLQDTRVPLLVSLVAYWVVGLGLGSVLSSVA 415 Query: 363 NFYTKGLWSGLICGLTCQTSTLV 295 +GLW GL GLT +LV Sbjct: 416 GLGARGLWFGLTAGLTLAGLSLV 438
>NORM_SYNP6 (Q5MZD9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 464 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/63 (30%), Positives = 34/63 (53%) Frame = -3 Query: 507 ISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLI 328 +++VLD Q V G G + L +L+AF+ +G+ + + F+L + + GLW G Sbjct: 369 LALVLDGVQRVAMGALHGLQDTRIPLLLSLLAFWMVGVGSSAMLGFQLGWGSTGLWIGQS 428 Query: 327 CGL 319 G+ Sbjct: 429 LGV 431
>NORM_BURPS (Q63S57) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 468 Score = 40.0 bits (92), Expect = 0.006 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = -3 Query: 498 VLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGL 319 ++D Q V SG RG + L ++ ++ IG P FAF +GLW GL GL Sbjct: 381 IVDGMQTVGSGCLRGLKDTRVPMLAAMLGYWGIGFPTGYWFAFHAGLGARGLWWGLAAGL 440
>NORM_RHIME (Q92PZ0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 40.0 bits (92), Expect = 0.006 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Frame = -3 Query: 543 AAEFAAIT-PLMMIS---IVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILF 376 AAE A PL++I+ ++D Q + +G+ RG + + ++A++ IG A F Sbjct: 364 AAEVLAFAGPLIVIAGAFQLVDGLQAIAAGMLRGLKDTTIPMILAMIAYWPIGFFCAWAF 423 Query: 375 AFKLNFYTKGLWSGLICGL 319 AF L F G+W G + GL Sbjct: 424 AFPLGFGGVGVWFGFVLGL 442
>NORM_BURVI (Q9F5N7) Multidrug resistance protein norM (Multidrug-efflux| transporter) Length = 462 Score = 38.9 bits (89), Expect = 0.013 Identities = 26/95 (27%), Positives = 40/95 (42%) Frame = -3 Query: 531 AAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYT 352 A++ + + ++D Q V SG RG + L ++ IG P AF Sbjct: 369 ASLLGIAAVFQIVDGMQTVGSGALRGLRDTRIPMLAATFGYWGIGFPTGYWLAFHAGLGA 428 Query: 351 KGLWSGLICGLTCQTSTLVVITARTKWSKIVDAMR 247 +GLW GL GL + L+ K S ++ A R Sbjct: 429 RGLWWGLAAGL-ASVAVLMAWRFHLKTSSLIAAPR 462
>NORM_BURMA (Q62LW6) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 468 Score = 38.9 bits (89), Expect = 0.013 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = -3 Query: 498 VLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGL 319 ++D Q V SG RG + L + ++ IG P FAF +GLW GL GL Sbjct: 381 IVDGMQTVGSGCLRGLKDTRVPMLAATLGYWGIGFPTGYWFAFHAGLGARGLWWGLAAGL 440
>NORM_BORPA (Q7WAK9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 38.1 bits (87), Expect = 0.021 Identities = 25/92 (27%), Positives = 42/92 (45%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A + A+ L I +D AQ + +G+ RG + L + ++ +G+P AF Sbjct: 365 LATAYLAVAALFQI---VDGAQVLGAGMLRGLHDTRVPMLYAALGYWGVGLPSGAALAFW 421 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVVITARTKW 271 + G+WSGL GL LV + +W Sbjct: 422 AGWRGVGVWSGLAIGL-----ALVAVLMMQRW 448
>NORM_BORBR (Q7WJR0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 38.1 bits (87), Expect = 0.021 Identities = 25/92 (27%), Positives = 42/92 (45%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFK 367 +A + A+ L I +D AQ + +G+ RG + L + ++ +G+P AF Sbjct: 365 LATAYLAVAALFQI---VDGAQVLGAGMLRGLHDTRVPMLYAALGYWGVGLPSGAALAFW 421 Query: 366 LNFYTKGLWSGLICGLTCQTSTLVVITARTKW 271 + G+WSGL GL LV + +W Sbjct: 422 AGWRGVGVWSGLAIGL-----ALVAVLMMQRW 448
>NORM_BRAJA (Q89W72) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 466 Score = 37.7 bits (86), Expect = 0.028 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 3/94 (3%) Frame = -3 Query: 564 FTGSEVIAAEFAAITPLMMIS---IVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 F GSE AA L+++ + D Q ++ G RG + + ++ + Sbjct: 362 FGGSEASAATVELTATLLLVGATFFIADGLQTIMGGALRGINDTRMTLAFAAIGYWCVAF 421 Query: 393 PLAILFAFKLNFYTKGLWSGLICGLTCQTSTLVV 292 P+A + AF G+W G G LV+ Sbjct: 422 PVAWVLAFHTGLGAVGVWIGFSIGTFVYAGLLVL 455
>NORM_PHOLL (Q7N1G0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 37.7 bits (86), Expect = 0.028 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 5/103 (4%) Frame = -3 Query: 582 GLWARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYF 403 G + L+T + I L+ + DS Q LSG+ RG L ++ Sbjct: 337 GSFISLYTNDNGVIIIALNIIFLLCLFQFFDSCQAALSGILRGFHDTRSVFYAPLFGYWL 396 Query: 402 IGMPLAILFAFKLNFYTK-----GLWSGLICGLTCQTSTLVVI 289 +G+PL + A ++ T+ G W GL+ GL L +I Sbjct: 397 VGLPLGFILAL-TDWVTERMGIIGFWYGLVLGLFVNAILLFII 438
>NORM_GEOKA (Q5KZL2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 455 Score = 37.0 bits (84), Expect = 0.048 Identities = 24/85 (28%), Positives = 36/85 (42%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 ARL+T +AA + V D+ + G RG + + L+A++ +G+ Sbjct: 344 ARLYTNDPTVAALTGKFLLYAIFFQVSDAIAAPIQGALRGYKEVNAVFWSALLAYWGVGL 403 Query: 393 PLAILFAFKLNFYTKGLWSGLICGL 319 PL A G W GLI GL Sbjct: 404 PLGCALALLTAAGAFGYWIGLIAGL 428
>PMPM_PSEAE (Q9I3Y3) Multidrug resistance protein pmpM (H(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 477 Score = 37.0 bits (84), Expect = 0.048 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Frame = -3 Query: 546 IAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMP----LAIL 379 IAA + L S D+ Q +G RG + + L A++ IG+P L + Sbjct: 363 IAASLIVFSALFQFS---DALQVTAAGALRGYQDTRVTMIMTLFAYWGIGLPVGYSLGLT 419 Query: 378 FAFKLNFYTKGLWSGLICGLTCQTSTLVVITART 277 F+ +GLW GL+ GLT L + AR+ Sbjct: 420 DWFQEPTGPRGLWQGLVVGLTGAAIMLCIRLARS 453
>NORM_XANAC (Q8PG07) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 458 Score = 36.6 bits (83), Expect = 0.062 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = -3 Query: 552 EVIAAEFAAITPLMMISIVL-DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILF 376 +V A A++ L + D Q + +G RG + + +++ +GMP+ Sbjct: 356 DVAVAALASVLLLFAATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGVGMPIGAGL 415 Query: 375 AFKLNFYTKGLWSGLICGLT 316 L + KG+W GLI GLT Sbjct: 416 GLGLGWGPKGMWVGLILGLT 435
>NORM_BACLD (Q65IG9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 452 Score = 36.2 bits (82), Expect = 0.081 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 492 DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGL 319 D+ + G RG + +T LV+++ IG+P+ + +F G W GLI GL Sbjct: 371 DAIAAPIQGALRGYKDVNYTLVTALVSYWIIGLPVGFVIGTYTSFGAFGYWIGLITGL 428
>NORM_XANCP (Q8P4E6) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 458 Score = 35.4 bits (80), Expect = 0.14 Identities = 21/84 (25%), Positives = 37/84 (44%) Frame = -3 Query: 567 LFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPL 388 ++T +AA + + D Q + +G RG + + +++ +GMPL Sbjct: 352 VYTNDAAVAALASVLLLFAATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPL 411 Query: 387 AILFAFKLNFYTKGLWSGLICGLT 316 L + +G+W GLI GLT Sbjct: 412 GAGLGLGLGWGPQGMWIGLILGLT 435
>MDTK_ERWAM (Q7WTR3) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 33.9 bits (76), Expect = 0.40 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 4/97 (4%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 A+L+ + A + L + + DS Q + SGV RG +A++ +G+ Sbjct: 341 AQLYADDPEVITMAAQLMLLAAVYQLSDSVQVIGSGVLRGYKDTRAIFFITFIAYWILGL 400 Query: 393 PLAILFAFKLNFY----TKGLWSGLICGLTCQTSTLV 295 P+ L G W G I GLT ++ Sbjct: 401 PIGYLLGMTNLLLPAMGPAGFWIGFIIGLTSSAIMMI 437
>NORM_SYNY3 (Q55364) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 461 Score = 33.9 bits (76), Expect = 0.40 Identities = 18/70 (25%), Positives = 31/70 (44%) Frame = -3 Query: 528 AITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTK 349 +I + +VLD Q +GV +G + + +A++ IG+ + L F Sbjct: 366 SIMKIAAFGLVLDGLQRTANGVLQGLQDTRIPMVLGTIAYWGIGLTASYLLGFYTPLSGA 425 Query: 348 GLWSGLICGL 319 G+W G GL Sbjct: 426 GVWIGTYIGL 435
>NORM_SHEON (Q8EES3) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 459 Score = 33.9 bits (76), Expect = 0.40 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = -3 Query: 549 VIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAF 370 V+A + L +S DS Q V +G RG A L +++ IGM L A+ Sbjct: 351 VLAGSLMLMAALYQLS---DSVQVVAAGALRGYKDTRSAFYITLFSYWGIGMSLGYTLAY 407 Query: 369 KLNFYTK-----GLWSGLICGLT 316 +F G W+GLI GLT Sbjct: 408 T-DFIVPAMGAHGFWTGLIAGLT 429
>MDTK_ERWCT (Q6D5W6) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 33.5 bits (75), Expect = 0.53 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 A L+ ++ A + + L + + D+ Q + +GV RG VA++ +G+ Sbjct: 341 ALLYNQDPLVVAMASQLMLLAAVYQISDAVQVIGTGVLRGYKDTRSIFYITFVAYWVLGL 400 Query: 393 PLAILFAFKLNFYTK----GLWSGLICGLTCQTSTLV 295 P L A + G W G I GLT +V Sbjct: 401 PSGYLLALTDVIVPRMGPAGFWCGFIIGLTAAAVMMV 437
>MDTK_SALTY (Q8ZPP2) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 32.7 bits (73), Expect = 0.90 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 A L+ + + A A + L + + DS Q + SG+ RG A++ +G+ Sbjct: 341 ALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGL 400 Query: 393 PLAILFAFKLNFYTK----GLWSGLICGLTCQTSTLVVITARTKW 271 P + A + G W G I GL TS V++ R ++ Sbjct: 401 PSGYILALTDLVVDRMGPAGFWMGFIIGL---TSAAVLMMLRMRY 442
>MDTK_SALTI (Q8Z6N7) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 32.7 bits (73), Expect = 0.90 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 A L+ + + A A + L + + DS Q + SG+ RG A++ +G+ Sbjct: 341 ALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGL 400 Query: 393 PLAILFAFKLNFYTK----GLWSGLICGLTCQTSTLVVITARTKW 271 P + A + G W G I GL TS V++ R ++ Sbjct: 401 PSGYILALTDLVVDRMGPAGFWMGFIIGL---TSAAVLMMLRMRY 442
>MDTK_SALPA (Q5PH16) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 32.3 bits (72), Expect = 1.2 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 A L+ + + A A + L + + DS Q + SG+ RG A++ +G+ Sbjct: 341 ALLYNDNPEVVALAAQLMLLAAVYQISDSIQIIGSGILRGYKDTRSIFFITFTAYWVLGL 400 Query: 393 PLAILFAFKLNFYTK----GLWSGLICGLTCQTSTLVVITARTKW 271 P + A + G W G I GL TS V++ R ++ Sbjct: 401 PSGYILALTDLVVDRMGPAGFWMGFIIGL---TSAAVLMMLRMRY 442
>MDTK_SALCH (Q57PL1) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 32.3 bits (72), Expect = 1.2 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = -3 Query: 573 ARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTNLVAFYFIGM 394 A L+ + + A A + L + + DS Q + SG+ RG A++ +G+ Sbjct: 341 ALLYNDNPEVVALAAQLMLLAAVYQISDSIQIIGSGILRGYKDTRSIFFITFTAYWVLGL 400 Query: 393 PLAILFAFKLNFYTK----GLWSGLICGLTCQTSTLVVITARTKW 271 P + A + G W G I GL TS V++ R ++ Sbjct: 401 PSGYILALTDLVVDRMGPAGFWMGFIIGL---TSAAVLMMLRMRY 442
>NORM_OCEIH (Q8CUL5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 447 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = -3 Query: 492 DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGLT 316 D+ + G RG ++ + L++++ IG+P L A G W G+I GL+ Sbjct: 371 DAIGAPIQGALRGYKDVNMTLVIALISYWIIGLPTGYLLANYTALEPFGYWVGIIVGLS 429
>NORM_VIBPA (O82855) Multidrug resistance protein norM (Na(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 456 Score = 31.2 bits (69), Expect = 2.6 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 6/121 (4%) Frame = -3 Query: 579 LWARLFTGSEVIAAEFAAITPLMMISIVLDSAQGVLSGVARGCGWQHLAALTN--LVAFY 406 L A L+T + + + + + D+ Q + +G RG ++ + A+ N +A++ Sbjct: 338 LIAELYTNNPEVISLAMQLLLFAAVYQCTDAVQVIAAGALRG--YKDMRAIFNRTFIAYW 395 Query: 405 FIGMPLAILFA----FKLNFYTKGLWSGLICGLTCQTSTLVVITARTKWSKIVDAMRQEK 238 +G+P + +G W G I GL T+ +++ R +W RQE Sbjct: 396 ILGLPTGYILGRTDWIVEPMGAQGFWLGFIIGL---TAAALMLGVRLRWMH-----RQEP 447 Query: 237 D 235 D Sbjct: 448 D 448
>NORM_NEIMB (Q9K015) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 459 Score = 31.2 bits (69), Expect = 2.6 Identities = 19/66 (28%), Positives = 27/66 (40%) Frame = -3 Query: 492 DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGLTC 313 D Q + S RG + + AF+ G+ L A++ N G W+ LI LT Sbjct: 377 DFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFNMGIYGFWTALIASLTI 436 Query: 312 QTSTLV 295 LV Sbjct: 437 AAIALV 442
>ISPF_XYLFT (Q87DY3) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC| 4.6.1.12) (MECPS) (MECDP-synthase) Length = 176 Score = 30.8 bits (68), Expect = 3.4 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 4/100 (4%) Frame = -2 Query: 436 GGANEP--CGVLLHRHA--VGHPLCLQAQLLHQGFMVGSDLRADLPDQHAGGDHRPHEMV 269 GG P CGVL H + H LC M+G+ D+ G H P V Sbjct: 35 GGVRVPHRCGVLAHSDGDVILHALC--------DAMLGALGLGDI------GQHFPPSDV 80 Query: 268 QDRGCDAAREGQLCRLIVKYRPWLALVCTGFCEMSGACDA 149 + +G D+ + C L+++ R W C G + + C++ Sbjct: 81 RWKGADSGVFVRHCNLLLRERDW----CVGNVDATAICES 116
>ISPF_XYLFA (Q9PDT5) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC| 4.6.1.12) (MECPS) (MECDP-synthase) Length = 176 Score = 30.8 bits (68), Expect = 3.4 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 4/100 (4%) Frame = -2 Query: 436 GGANEP--CGVLLHRHA--VGHPLCLQAQLLHQGFMVGSDLRADLPDQHAGGDHRPHEMV 269 GG P CGVL H + H LC M+G+ D+ G H P V Sbjct: 35 GGVRVPHRCGVLAHSDGDVILHALC--------DAMLGALGLGDI------GQHFPPSDV 80 Query: 268 QDRGCDAAREGQLCRLIVKYRPWLALVCTGFCEMSGACDA 149 + +G D+ + C L+++ R W C G + + C++ Sbjct: 81 RWKGADSGVFVRHCHLLLRERDW----CVGNVDATAICES 116
>PRIA_LENED (Q01200) Protein priA precursor| Length = 258 Score = 25.0 bits (53), Expect(2) = 4.8 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +1 Query: 517 RGDGRKFCRDHLAPSEEPRPKARGRCPEAG 606 +G+G + R H+A + PK CP AG Sbjct: 162 KGNGHHYKRAHVARAVPACPKGLDACPIAG 191 Score = 23.9 bits (50), Expect(2) = 4.8 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +2 Query: 410 NATRFVSAARCCHPQPLATPDSTP 481 N ++S+ CC P + P STP Sbjct: 131 NGWDWISSLLCCTPSSPSKPSSTP 154
>MDTK_YERPS (Q66A27) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 30.0 bits (66), Expect = 5.8 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Frame = -3 Query: 492 DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFY------TKGLWSGL 331 D+ Q + SGV RG A++ +G+P L L Y G W G Sbjct: 368 DAVQVIGSGVLRGYKDTRSIFFITFTAYWLLGLPSGYLLG--LTDYILPAMGPAGFWIGF 425 Query: 330 ICGLTCQTSTLVVITARTKW 271 I GL T+ +++ R +W Sbjct: 426 IIGL---TAAAILMVLRIRW 442
>MDTK_YERPE (Q8ZDZ8) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 30.0 bits (66), Expect = 5.8 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Frame = -3 Query: 492 DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFY------TKGLWSGL 331 D+ Q + SGV RG A++ +G+P L L Y G W G Sbjct: 368 DAVQVIGSGVLRGYKDTRSIFFITFTAYWLLGLPSGYLLG--LTDYILPAMGPAGFWIGF 425 Query: 330 ICGLTCQTSTLVVITARTKW 271 I GL T+ +++ R +W Sbjct: 426 IIGL---TAAAILMVLRIRW 442
>Y195A_HAEIN (Q57362) MscS family protein HI0195.1 precursor| Length = 1111 Score = 30.0 bits (66), Expect = 5.8 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +2 Query: 509 IMSGVMAANSAAITSLPVKSLAQRPVADAQKQDEGESE 622 + GV+AANS + LP + + +A+AQK EGE++ Sbjct: 25 VSQGVLAANSTNV--LPTEQSLKADLANAQKMSEGEAK 60
>NORM_BACSU (O31855) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 452 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = -3 Query: 492 DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGL 319 D+ + G RG + V+++ IG+P+ + + G W GLI GL Sbjct: 371 DAVAAPIQGALRGYKDVNYTLAAAFVSYWVIGLPVGYMVGTFTSLGAFGYWIGLIAGL 428
>NORM_NEIMA (Q9JV27) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 459 Score = 29.3 bits (64), Expect = 10.0 Identities = 18/66 (27%), Positives = 27/66 (40%) Frame = -3 Query: 492 DSAQGVLSGVARGCGWQHLAALTNLVAFYFIGMPLAILFAFKLNFYTKGLWSGLICGLTC 313 D Q + S RG + + AF+ G+ L A++ + G W+ LI LT Sbjct: 377 DFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTI 436 Query: 312 QTSTLV 295 LV Sbjct: 437 AAIALV 442
>NMT_USTMA (Q4PB56) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)| (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein N-myristoyltransferase) (NMT) Length = 706 Score = 29.3 bits (64), Expect = 10.0 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +2 Query: 464 TPDSTPCAESSTIEIIMSGVMAANSAAITSLPVKSLAQRPVADAQKQDEGESEE 625 T + + SST S +A S ++T+ PVK Q D + DE E EE Sbjct: 11 TSVAASASSSSTRPAAASSSIAPPSPSLTTAPVKEQEQDDDDDQENDDEEEEEE 64
>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)| Length = 1411 Score = 29.3 bits (64), Expect = 10.0 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Frame = +2 Query: 449 PQPLATPDSTPCAESSTIEIIMSGVMAANSAAITSLPVKSL------AQRPVADAQKQDE 610 PQ A P T S+ + + G A + P S QRP D+ +E Sbjct: 562 PQTKACPKKTNTTASAKVAPVRVGTQPPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEE 621 Query: 611 GESEE 625 +SEE Sbjct: 622 SDSEE 626 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,513,225 Number of Sequences: 219361 Number of extensions: 1920438 Number of successful extensions: 5598 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 5355 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5588 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
