ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61p02 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 193 bits (491), Expect = 2e-49 Identities = 94/101 (93%), Positives = 97/101 (96%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN SSSTG ITLSVT+ Sbjct: 232 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQ 291 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 292 SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 192 bits (487), Expect = 6e-49 Identities = 98/103 (95%), Positives = 99/103 (96%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEEELAKENVKNASSSTGNITLSVTK Sbjct: 225 LVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTK 284 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 170 SKPETGEVIGVFESVQPSDTDL +APKDVKIQGVWYAQLESN Sbjct: 285 SKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLESN 325
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 191 bits (486), Expect = 8e-49 Identities = 92/101 (91%), Positives = 97/101 (96%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRGDEEEL KEN+K+ SSSTG ITLSVTK Sbjct: 229 LVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTK 288 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 SKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+WYAQLE Sbjct: 289 SKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 190 bits (482), Expect = 2e-48 Identities = 92/101 (91%), Positives = 96/101 (95%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN +S TG ITLSVT+ Sbjct: 229 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQ 288 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 289 SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 187 bits (476), Expect = 1e-47 Identities = 91/101 (90%), Positives = 94/101 (93%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN ++S G ITL VTK Sbjct: 232 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTK 291 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY QLE Sbjct: 292 SKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 187 bits (475), Expect = 2e-47 Identities = 90/102 (88%), Positives = 95/102 (93%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN +S TG IT +VTK Sbjct: 232 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTK 291 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 173 S P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLES Sbjct: 292 SNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 187 bits (475), Expect = 2e-47 Identities = 92/102 (90%), Positives = 97/102 (95%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRG STGYDNAVALPAGGRGDEEEL KEN K+A+SS G ITLSVT+ Sbjct: 228 LVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQ 287 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 173 +KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGVWYAQLES Sbjct: 288 TKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 187 bits (474), Expect = 2e-47 Identities = 89/101 (88%), Positives = 95/101 (94%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL+KENVKN ++S G ITL +TK Sbjct: 231 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITK 290 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY Q+E Sbjct: 291 SKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 184 bits (467), Expect = 1e-46 Identities = 90/101 (89%), Positives = 94/101 (93%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN KN +SS G ITLSVT Sbjct: 230 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTS 289 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GVWYAQLE Sbjct: 290 SKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 147 bits (372), Expect = 1e-35 Identities = 73/101 (72%), Positives = 81/101 (80%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 LVPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KENVK + G+ SV K Sbjct: 193 LVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAK 250 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+ Sbjct: 251 VDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 144 bits (363), Expect = 2e-34 Identities = 71/100 (71%), Positives = 79/100 (79%) Frame = -2 Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299 +VPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KENVK+ + G+ SV K Sbjct: 194 VVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAK 251 Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 179 TGE+ GVFES+QPSDTDLGAK PKD+KI G+WY QL Sbjct: 252 VNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 142 bits (357), Expect = 8e-34 Identities = 67/99 (67%), Positives = 79/99 (79%) Frame = -2 Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296 VPSYRG++FLDPKGRGG++GYD AVALPA G D+EE AKEN K+ ++S G I V K Sbjct: 238 VPSYRGATFLDPKGRGGASGYDTAVALPASG--DDEEYAKENSKSTAASVGTIAFKVAKV 295 Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 179 ETGE+ GVFES+QPSDTDLGAK PKD+K GVWYAQ+ Sbjct: 296 NAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 121 bits (304), Expect = 1e-27 Identities = 59/100 (59%), Positives = 76/100 (76%) Frame = -2 Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296 VPSYRG++FLDPKGRG +GYDNAVALPA + D+E+L + NVK A G I+L + K Sbjct: 176 VPSYRGAAFLDPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKV 233 Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 +GE+ G FES QPSDTDLGA PK+VKI+G++YA++E Sbjct: 234 DSSSGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 117 bits (293), Expect = 2e-26 Identities = 61/99 (61%), Positives = 76/99 (76%) Frame = -2 Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296 VPSYRG++FLDPKGRG +TGYDNAVALPA D+E+ A NVK G+I+L VTK Sbjct: 177 VPSYRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKV 232 Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 179 TGE+ GVF+S QPSDTDLGAK P +VKI+G++YA++ Sbjct: 233 DQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 110 bits (276), Expect = 2e-24 Identities = 57/100 (57%), Positives = 73/100 (73%) Frame = -2 Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296 VPSYR ++FLDPKGRG ++GYD+A+ALP + EEELA+ NVK S + G I+L+V K Sbjct: 174 VPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKV 230 Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 TGE+ G FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 231 DGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 110 bits (276), Expect = 2e-24 Identities = 57/100 (57%), Positives = 73/100 (73%) Frame = -2 Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296 VPSYR ++FLDPKGRG ++GYD+A+ALP + EEELA+ NVK S + G I+L+V K Sbjct: 174 VPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKV 230 Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 TGE+ G FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 231 DGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 110 bits (274), Expect = 3e-24 Identities = 55/100 (55%), Positives = 73/100 (73%) Frame = -2 Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296 VPSYR S+FLDPK RG +TGY++AVA+P+ G D E+L KENVK + G I+L+V+K Sbjct: 176 VPSYRTSNFLDPKARGLTTGYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLAVSKV 233 Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176 TGEV GVF ++QPSDTD+G K DVK+ G +Y ++E Sbjct: 234 DGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 106 bits (265), Expect = 4e-23 Identities = 52/102 (50%), Positives = 70/102 (68%) Frame = -2 Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296 VPSYRG+ FLDPK RG TGYDNAVALP+ + + N K G ++L VT+ Sbjct: 177 VPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQV 231 Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 170 TGE+ G+FES QPSDTDLGAK P DVK++G++Y +++++ Sbjct: 232 DGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 439 KGRGGSTGYDNAVALPAGGR 380 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.22 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = -2 Query: 364 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 203 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 1.9 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 403 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 227 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 226 KAP 218 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 2.5 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 385 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 251 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 4.2 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 253 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 122 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +3 Query: 129 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 308 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 309 LRV---MLPVEEDAFFTF 353 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 29.3 bits (64), Expect = 7.2 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = -2 Query: 463 RGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNITLSVTK 299 R S L G G + G A L AGGRGD +E+ E KNA + IT + + Sbjct: 435 RVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEE 494 Query: 298 SKP 290 P Sbjct: 495 PMP 497
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 7.2 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = +3 Query: 69 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 248 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 249 GCTLSKTPITSPVSGLL 299 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 7.2 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 253 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 128 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 29.3 bits (64), Expect = 7.2 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = -2 Query: 463 RGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNITLSVTK 299 R S L G G + G A L AGGRGD +E+ E KNA + IT + + Sbjct: 435 RVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEE 494 Query: 298 SKP 290 P Sbjct: 495 PMP 497
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 7.2 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = -2 Query: 463 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 284 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 283 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 197 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 28.9 bits (63), Expect = 9.3 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Frame = -2 Query: 460 GSSFLDPKGRGG---STGYDNAVALPAGG----RGDEEELAKENVKNASSSTGN 320 G ++ G GG STG N+ + PAGG G ++ ++ + + SSS+GN Sbjct: 170 GGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGN 223
>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 330 Score = 28.9 bits (63), Expect = 9.3 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = -2 Query: 316 TLSVTKSKPETGEVIGVFESVQPSD 242 +LSV+K+K E EV+GV E VQ SD Sbjct: 52 SLSVSKAKKEGFEVLGVKELVQQSD 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,489,989 Number of Sequences: 219361 Number of extensions: 1090314 Number of successful extensions: 4245 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4234 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
