ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbags9a13 | 624 | AV920038 | not_full | ref|XM_469569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1540 | 500 | not_full | ACT_GOSHI (O81221) Actin Length = 377 | 403 | -- | --- | - | -- | --- | - |
| rbags9a12 | 643 | AV920037 | not_full | gb|AF079318.1|AF079318 Triticum aestivum MAP kinase homolog (WCK-1) mRNA, complete cds Length = 1452 | 82 | not_full | MAPK_PEA (Q06060) Mitogen-activated protein kinase homolog D5 (EC 2.7.11.24) Length = 394 | 468 | -- | --- | - | -- | --- | - |
| rbags9a11 | 500 | AV920036 | not_full | ref|XM_480480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1185 | 74 | not_full | LGUL_ORYSA (Q948T6) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) Length = 291 | 24 | -- | --- | - | -- | --- | - |
| rbags9a10 | 664 | AV920035 | not_full | gb|AY091512.1| Triticum aestivum endo-1,4-beta-glucanase mRNA, complete cds Length = 2196 | 74 | not_full | GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo-1,4-beta-glucanase) (Abscission cellulase 1) Length = 494 | 14 | -- | --- | - | -- | --- | - |
| rbags9a09 | 490 | AV920034 | not_full | dbj|AK070862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E23, full insert sequence Length = 3546 | 73 | not_full | EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex component Sec8) Length = 1053 | 7 | -- | --- | - | -- | --- | - |
| rbags9a08 | 683 | AV920033 | not_full | ref|NM_187407.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 | 132 | not_full | BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein) Length = 418 | 200 | -- | --- | - | -- | --- | - |
| rbags9a06 | 731 | AV920032 | not_full | gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 | 175 | not_full | MDE7_SCHPO (O59784) RNA-binding protein mde7 (Mei4-dependent protein 7) Length = 761 | 14 | -- | --- | - | -- | --- | - |
| rbags9a05 | 736 | AV920031 | not_full | ref|XM_483631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 | 51 | not_full | FAF1_HUMAN (Q9UNN5) FAS-associated factor 1 (Protein FAF1) (hFAF1) Length = 650 | 10 | -- | --- | - | -- | --- | - |
| rbags9a04 | 691 | AV920030 | not_full | gb|AY106414.1| Zea mays PCO109372 mRNA sequence Length = 1863 | 80 | not_full | LEU21_METKA (Q8TVF2) 3-isopropylmalate dehydratase large subunit 1 (EC 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 418 | 256 | -- | --- | - | -- | --- | - |
| rbags9a03 | 691 | AV920029 | not_full | gb|AY220735.1| Hordeum vulgare ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 758 | 283 | not_full | UBC4_LYCES (P35135) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) Length = 148 | 187 | -- | --- | - | -- | --- | - |
| rbags9a02 | 669 | AV920028 | not_full | ref|XM_483366.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1878 | 23 | not_full | TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein) Length = 375 | 85 | -- | --- | - | -- | --- | - |
| rbags9a01 | 649 | AV920027 | not_full | gb|BT016586.1| Zea mays clone Contig419 mRNA sequence Length = 1548 | 30 | not_full | CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2) (hPc2) Length = 558 | 18 | -- | --- | - | -- | --- | - |
| rbags8p24 | 47 | AV834268 | not_full | gb|BT017338.1| Zea mays clone EL01N0321D06.c mRNA sequence Length = 620 | 19 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8p22 | 413 | AV920026 | not_full | gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 | 198 | not_full | R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4 Length = 206 | 36 | -- | --- | - | -- | --- | - |
| rbags8p19 | 634 | AV920025 | not_full | gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 | 86 | not_full | Y209_ENCCU (Q8SWH3) Hypothetical protein ECU02_0090 Length = 258 | 3 | -- | --- | - | -- | --- | - |
| rbags8p18 | 675 | AV920024 | not_full | ref|NM_194962.1| Oryza sativa (japonica cultivar-group) putative alcohol dehydrogenase (OSJNAa0036D19.15), mRNA Length = 429 | 58 | not_full | ADHX_ARATH (Q96533) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) Length = 379 | 119 | -- | --- | - | -- | --- | - |
| rbags8p16 | 624 | AV920023 | not_full | dbj|AK061948.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E07, full insert sequence Length = 1803 | 98 | not_full | THIK2_ARATH (Q56WD9) 3-ketoacyl-CoA thiolase 2, peroxisomal precursor (EC 2.3.1.16) (Beta-ketothiolase 2) (Acetyl-CoA acyltransferase 2) (Peroxisomal 3-oxoacyl-CoA thiolase 2) (Peroxisome defective protein 1) Length = 462 | 152 | -- | --- | - | -- | --- | - |
| rbags8p14 | 652 | AV920022 | not_full | emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 | 144 | not_full | NLT43_HORVU (Q42842) Nonspecific lipid-transfer protein 4.3 precursor (LTP 4.3) Length = 115 | 84 | -- | --- | - | -- | --- | - |
| rbags8p12 | 521 | AV920021 | not_full | dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041H12, full insert sequence Length = 1930 | 28 | not_full | YLIF_ECOLI (P75801) Hypothetical membrane protein yliF Length = 442 | 3 | -- | --- | - | -- | --- | - |
| rbags8p11 | 199 | AV920020 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 16 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8p10 | 600 | AV920019 | not_full | gb|BT009568.1| Triticum aestivum clone wre1n.pk0015.d2:fis, full insert mRNA sequence Length = 1165 | 63 | not_full | THTM_HUMAN (P25325) 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2) (MST) Length = 296 | 56 | -- | --- | - | -- | --- | - |
| rbags8p09 | 318 | AV920018 | not_full | gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 map 14, complete sequence Length = 204267 | 1 | not_full | CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 | 8 | -- | --- | - | -- | --- | - |
| rbags8p08 | 563 | AV920017 | not_full | gb|BT009604.1| Triticum aestivum clone wre1n.pk0082.c6:fis, full insert mRNA sequence Length = 1676 | 40 | not_full | MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) Length = 504 | 33 | -- | --- | - | -- | --- | - |
| rbags8p07 | 541 | AV920016 | not_full | gb|AF475129.1| Triticum aestivum elongation factor mRNA, partial cds Length = 504 | 316 | not_full | EF2_BETVU (O23755) Elongation factor 2 (EF-2) Length = 843 | 385 | -- | --- | - | -- | --- | - |
| rbags8p06 | 561 | AV920015 | not_full | dbj|AK061950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E10, full insert sequence Length = 1759 | 29 | not_full | MA2B1_HUMAN (O00754) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24) (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) [Contains: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase | 20 | -- | --- | - | -- | --- | - |
| rbags8p05 | 591 | AV920014 | not_full | emb|X82830.1|HVCIIIO H.vulgare mRNA for coproporphyrinogen oxidase Length = 1456 | 95 | not_full | HEM6_HORVU (Q42840) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 391 | 71 | -- | --- | - | -- | --- | - |
| rbags8p04 | 615 | AV920013 | not_full | gb|AY103818.1| Zea mays PCO124949 mRNA sequence Length = 1251 | 40 | not_full | PSD8_DICDI (P02889) Probable 26S proteasome non-ATPase regulatory subunit 8 (Vegetative cell protein X) (M4 protein) Length = 263 | 23 | -- | --- | - | -- | --- | - |
| rbags8p03 | 431 | AV920012 | not_full | gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full insert mRNA sequence Length = 1768 | 500 | not_full | H4_SILLA (Q76H85) Histone H4 Length = 102 | 138 | -- | --- | - | -- | --- | - |
| rbags8p02 | 616 | AV920011 | not_full | emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 | 128 | not_full | NLT43_HORVU (Q42842) Nonspecific lipid-transfer protein 4.3 precursor (LTP 4.3) Length = 115 | 83 | -- | --- | - | -- | --- | - |
| rbags8o24 | 658 | AV920010 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 51 | not_full | COBL7_ARATH (Q8GZ17) COBRA-like protein 7 precursor Length = 661 | 13 | -- | --- | - | -- | --- | - |
| rbags8o22 | 540 | AV920009 | not_full | ref|XM_469569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1540 | 500 | not_full | ACT1_ORYSA (P13362) Actin-1 Length = 377 | 407 | -- | --- | - | -- | --- | - |
| rbags8o21 | 604 | AV920008 | not_full | gb|AY846821.1| Triticum aestivum ribosomal protein L10A mRNA, complete cds Length = 788 | 500 | not_full | R10AA_ARATH (Q8VZB9) 60S ribosomal protein L10a-1 Length = 216 | 79 | -- | --- | - | -- | --- | - |
| rbags8o20 | 615 | AV920007 | not_full | gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump ATPase (Ha1) mRNA, complete cds Length = 3446 | 199 | not_full | PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump) Length = 951 | 28 | -- | --- | - | -- | --- | - |
| rbags8o12 | 478 | AV834267 | not_full | gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 | 35 | not_full | MKTX1_MESMA (P56569) Makatoxin-1 (Makatoxin I) (MkTx I) Length = 64 | 16 | -- | --- | - | -- | --- | - |
| rbags8o11 | 602 | AV834266 | not_full | emb|AL445672.15| Human DNA sequence from clone RP11-66D1 on chromosome 9, complete sequence Length = 113031 | 18 | not_full | VLDLR_CHICK (P98165) Very low-density lipoprotein receptor precursor (VLDL receptor) (VLDL-R) (Vitellogenin receptor) (VTG receptor) Length = 863 | 1 | -- | --- | - | -- | --- | - |
| rbags8o10 | 595 | AV920006 | not_full | ref|NM_193765.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 | 28 | not_full | PSD13_HUMAN (Q9UNM6) 26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) Length = 376 | 17 | -- | --- | - | -- | --- | - |
| rbags8o09 | 650 | AV920005 | not_full | dbj|AK102721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105G07, full insert sequence Length = 914 | 271 | not_full | RL19C_ARATH (P49693) 60S ribosomal protein L19-3 Length = 208 | 25 | -- | --- | - | -- | --- | - |
| rbags8o07 | 456 | AV920004 | not_full | gb|AY104225.1| Zea mays PCO144800 mRNA sequence Length = 939 | 37 | not_full | SEM5B_HUMAN (Q9P283) Semaphorin-5B precursor Length = 1093 | 9 | -- | --- | - | -- | --- | - |
| rbags8o06 | 651 | AV920003 | not_full | gb|AY669072.1| Oryza sativa dual-specificity phosphatase protein mRNA, complete cds Length = 1119 | 23 | not_full | Y1500_ARATH (Q9ZVN4) Probable tyrosine-protein phosphatase At1g05000 (EC 3.1.3.48) Length = 215 | 8 | -- | --- | - | -- | --- | - |
| rbags8o05 | 652 | AV920002 | not_full | dbj|AK064856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H11, full insert sequence Length = 1588 | 75 | not_full | PAHX_HUMAN (O14832) Phytanoyl-CoA dioxygenase, peroxisomal precursor (EC 1.14.11.18) (Phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid oxidase) Length = 338 | 18 | -- | --- | - | -- | --- | - |
| rbags8o03 | 580 | AV920001 | not_full | ref|XM_467194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 | 55 | not_full | SYD_RAT (P15178) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS) Length = 501 | 500 | -- | --- | - | -- | --- | - |
| rbags8o02 | 625 | AV920000 | not_full | gb|BT009299.1| Triticum aestivum clone wlm1.pk0008.c11:fis, full insert mRNA sequence Length = 1344 | 172 | not_full | NAM8_YEAST (Q00539) Protein NAM8 Length = 523 | 4 | -- | --- | - | -- | --- | - |
| rbags8o01 | 130 | AV919999 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 59 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8n24 | 151 | AV919998 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8n23 | 651 | AV919997 | not_full | dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135E20, full insert sequence Length = 1413 | 72 | not_full | ATPG3_IPOBA (P26360) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) Length = 326 | 232 | -- | --- | - | -- | --- | - |
| rbags8n22 | 613 | AV919996 | not_full | emb|AJ420778.1|TAE420778 Triticum aestivum partial mRNA for putative fructose 1-,6- biphosphate aldolase (ald gene) Length = 1093 | 500 | not_full | ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) Length = 358 | 60 | -- | --- | - | -- | --- | - |
| rbags8n21 | 613 | AV919995 | not_full | gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full insert mRNA sequence Length = 936 | 46 | not_full | YFGH_ECOLI (P65290) Hypothetical lipoprotein yfgH precursor Length = 172 | 5 | -- | --- | - | -- | --- | - |
| rbags8n20 | 598 | AV919994 | not_full | ref|XM_472371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 | 125 | not_full | CALX_SOYBN (Q39817) Calnexin homolog precursor Length = 546 | 8 | -- | --- | - | -- | --- | - |
| rbags8n19 | 363 | AV919993 | not_full | emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 | 59 | not_full | RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subunit beta, chloroplast (60 kDa chaperonin subunit beta) (CPN-60 beta) (Fragment) Length = 499 | 398 | -- | --- | - | -- | --- | - |
| rbags8n18 | 529 | AV919992 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 22 | not_full | RLUB_XANCP (Q8P8M6) Ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 492 | 5 | -- | --- | - | -- | --- | - |
