| Clone Name | rbags8o11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VLDLR_CHICK (P98165) Very low-density lipoprotein receptor precu... | 30 | 5.4 |
|---|
>VLDLR_CHICK (P98165) Very low-density lipoprotein receptor precursor (VLDL| receptor) (VLDL-R) (Vitellogenin receptor) (VTG receptor) Length = 863 Score = 30.0 bits (66), Expect = 5.4 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +2 Query: 512 KHSREVAPRWRALGHGCGARRWCPLPR 592 + SR+ R A G GCGARRW LPR Sbjct: 2 RSSRQRGDRSAATGGGCGARRWA-LPR 27 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,806,460 Number of Sequences: 219361 Number of extensions: 1707098 Number of successful extensions: 4863 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4863 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)