>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24
              map C535, complete sequence
          Length = 174759

 Score =  172 bits (87), Expect = 7e-40
 Identities = 126/139 (90%)
 Strand = Plus / Plus

                                                                          
Query: 326    atcatcttctgcttggagcagcaattggcgccctttgtgctggagctcgaccctgccctc 385
              |||||||||| |||||||||||| |||| |||||||| |||  || | | ||||||||||
Sbjct: 112340 atcatcttctccttggagcagcatttggtgccctttgagctccaggttggccctgccctc 112399

                                                                          
Query: 386    cagcttgctcctccggtatgttggctgctgccgtgacggcgttcatgacaatgagaccaa 445
              |||||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 112400 cagcttgctcctccggcatgttcgctgctgccgtgacagcattcatgacaatgagaccaa 112459

                                 
Query: 446    gaggaatgatgtacatcca 464
              |||||||||||||||||||
Sbjct: 112460 gaggaatgatgtacatcca 112478

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  172 bits (87), Expect = 7e-40
 Identities = 126/139 (90%)
 Strand = Plus / Minus

                                                                           
Query: 326     atcatcttctgcttggagcagcaattggcgccctttgtgctggagctcgaccctgccctc 385
               |||||||||| |||||||||||| |||| |||||||| |||  || | | ||||||||||
Sbjct: 8905887 atcatcttctccttggagcagcatttggtgccctttgagctccaggttggccctgccctc 8905828

                                                                           
Query: 386     cagcttgctcctccggtatgttggctgctgccgtgacggcgttcatgacaatgagaccaa 445
               |||||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 8905827 cagcttgctcctccggcatgttcgctgctgccgtgacagcattcatgacaatgagaccaa 8905768

                                  
Query: 446     gaggaatgatgtacatcca 464
               |||||||||||||||||||
Sbjct: 8905767 gaggaatgatgtacatcca 8905749

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  172 bits (87), Expect = 7e-40
 Identities = 126/139 (90%)
 Strand = Plus / Minus

                                                                           
Query: 326     atcatcttctgcttggagcagcaattggcgccctttgtgctggagctcgaccctgccctc 385
               |||||||||| |||||||||||| |||| |||||||| |||  || | | ||||||||||
Sbjct: 8977550 atcatcttctccttggagcagcatttggtgccctttgagctccaggttggccctgccctc 8977491

                                                                           
Query: 386     cagcttgctcctccggtatgttggctgctgccgtgacggcgttcatgacaatgagaccaa 445
               |||||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 8977490 cagcttgctcctccggcatgttcgctgctgccgtgacagcattcatgacaatgagaccaa 8977431

                                  
Query: 446     gaggaatgatgtacatcca 464
               |||||||||||||||||||
Sbjct: 8977430 gaggaatgatgtacatcca 8977412

>gb|AY105890.1| Zea mays PCO111077 mRNA sequence
          Length = 1356

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                       
Query: 394 tcctccggtatgttggctgctgcc-gtgacggcgttcatgacaatgagaccaagaggaat 452
           ||||| ||||||||||| |||||| || || || ||||||||||| |||||||| |||||
Sbjct: 954 tcctctggtatgttggcagctgcccgtaacagcattcatgacaataagaccaagcggaat 895

                                     
Query: 453 gatgtacatccaatatttagcccaga 478
           ||||||||||||||||||||||||||
Sbjct: 894 gatgtacatccaatatttagcccaga 869

>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence
          Length = 113361

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 418    gtgacggcgttcatgacaatgagaccaagaggaatgatgtacatcca 464
              |||||||| ||||| |||||||| |||||||| || |||||||||||
Sbjct: 111784 gtgacggcattcattacaatgagtccaagagggatcatgtacatcca 111830

>gb|BC084304.1| Xenopus laevis cDNA clone IMAGE:6863324, partial cds
          Length = 1626

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 448 ggaatgatgtacatccaatatttagc 473
           ||||||||||||||||||||||||||
Sbjct: 686 ggaatgatgtacatccaatatttagc 661

>gb|BC042237.1| Xenopus laevis hypothetical protein LOC398481, mRNA (cDNA clone
           IMAGE:5570892), partial cds
          Length = 1802

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 448 ggaatgatgtacatccaatatttagc 473
           ||||||||||||||||||||||||||
Sbjct: 698 ggaatgatgtacatccaatatttagc 673

>ref|XM_541478.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 2310044H10,
           transcript variant 1 (LOC484362), mRNA
          Length = 859

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 448 ggaatgatgtacatccaatattt 470
           |||||||||||||||||||||||
Sbjct: 765 ggaatgatgtacatccaatattt 743

>emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in linkage group 21,
             complete sequence
          Length = 180154

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 34    tgatattggtataaattaagct 55
             ||||||||||||||||||||||
Sbjct: 26951 tgatattggtataaattaagct 26972

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 351     tggcgccctttgtgctggagctcga 375
               |||||||||||||||||| ||||||
Sbjct: 1689496 tggcgccctttgtgctggggctcga 1689520

>ref|XM_584351.2| PREDICTED: Bos taurus similar to RIKEN cDNA 2310044H10, transcript
           variant 1 (LOC507692), mRNA
          Length = 1926

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 759 gatgtacatccaatatttagc 739

>emb|CR718307.2|CNS0GH6X Tetraodon nigroviridis full-length cDNA
          Length = 749

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 546 gatgtacatccaatatttagc 526

>emb|CR716957.2|CNS0GG5I Tetraodon nigroviridis full-length cDNA
          Length = 892

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 694 gatgtacatccaatatttagc 674

>emb|CR697233.2|CNS0G0XP Tetraodon nigroviridis full-length cDNA
          Length = 730

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 532 gatgtacatccaatatttagc 512

>emb|CR690057.2|CNS0FVED Tetraodon nigroviridis full-length cDNA
          Length = 729

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 531 gatgtacatccaatatttagc 511

>emb|CR689631.2|CNS0FV2J Tetraodon nigroviridis full-length cDNA
          Length = 741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 543 gatgtacatccaatatttagc 523

>emb|CR686754.2|CNS0FSUM Tetraodon nigroviridis full-length cDNA
          Length = 729

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 531 gatgtacatccaatatttagc 511

>emb|CR663743.2|CNS0FB45 Tetraodon nigroviridis full-length cDNA
          Length = 730

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 gatgtacatccaatatttagc 473
           |||||||||||||||||||||
Sbjct: 531 gatgtacatccaatatttagc 511

>emb|BX053891.1|CNS09DQV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC31DC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 931

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 376 ccctgccctccagcttgctcc 396
           |||||||||||||||||||||
Sbjct: 161 ccctgccctccagcttgctcc 141

>gb|AC093801.3| Homo sapiens BAC clone RP11-313E19 from 4, complete sequence
          Length = 126929

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 54     ctagttctgaatattaaagcatgca 78
              ||||||||||||||||||| |||||
Sbjct: 102850 ctagttctgaatattaaagtatgca 102874

>ref|NM_075406.2| Caenorhabditis elegans Y43F8C.7 (Y43F8C.7) mRNA, complete cds
          Length = 779

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 454 atgtacatccaatatttagcc 474
           |||||||||||||||||||||
Sbjct: 636 atgtacatccaatatttagcc 616

>dbj|AP002512.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-3051L14, complete
              sequences
          Length = 175031

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 437    tgagaccaagaggaatgatgtacat 461
              |||||||||||||||||| ||||||
Sbjct: 100842 tgagaccaagaggaatgaggtacat 100866

>ref|XM_415833.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 4930563A03 gene
           (LOC417587), mRNA
          Length = 4042

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 catccgctgtccattctttg 292
           ||||||||||||||||||||
Sbjct: 700 catccgctgtccattctttg 681

>gb|AY454809.1| Papio papio clone 5 olfactory receptor gene, partial cds
          Length = 658

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 aagaagccatcatcttctgc 337
           ||||||||||||||||||||
Sbjct: 257 aagaagccatcatcttctgc 238

>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete
             sequence
          Length = 121720

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   aagaagccatcatcttctgc 337
             ||||||||||||||||||||
Sbjct: 62827 aagaagccatcatcttctgc 62808

>emb|AL358073.24| Human DNA sequence from clone RP11-458I7 on chromosome 1 Contains the
             5' end of the ZA20D1 gene for zinc finger, A20 domain
             containing 1, a ribosomal protein L6 (RPL6) pseudogene,
             the VPS45A gene for vacuolar protein sorting 45A (yeast),
             the gene for CK2 interacting protein 1; HQ0024c protein
             (CKIP-1), a novel gene and a CpG island, complete sequence
          Length = 188211

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 14    tgagcaaaacatataatgtttgatattg 41
             ||||||||||| ||| ||||||||||||
Sbjct: 57353 tgagcaaaacaaatattgtttgatattg 57326

>ref|XM_786536.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S ribosomal
           protein L17 (L23) (Amino acid starvation-induced
           protein) (ASI) (LOC586769), mRNA
          Length = 631

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 agccatcatcttctgcttgg 341
           ||||||||||||||||||||
Sbjct: 556 agccatcatcttctgcttgg 537

>ref|XM_793923.1| PREDICTED: Strongylocentrotus purpuratus similar to RIKEN cDNA
           2310044H10 (LOC594486), mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 447 aggaatgatgtacatccaatattt 470
           ||||| ||||||||||||||||||
Sbjct: 321 aggaacgatgtacatccaatattt 298

>emb|AL031852.1|SPBC1709 S.pombe chromosome II cosmid c1709
          Length = 39489

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    taatgtttgatattggtata 46
             ||||||||||||||||||||
Sbjct: 24858 taatgtttgatattggtata 24839

>emb|CR523927.1| Gallus gallus finished cDNA, clone ChEST672l24
          Length = 1741

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 catccgctgtccattctttg 292
           ||||||||||||||||||||
Sbjct: 223 catccgctgtccattctttg 204

>emb|BX572621.7| Zebrafish DNA sequence from clone DKEY-34B22 in linkage group 5,
             complete sequence
          Length = 196336

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tgttctggagaggtcaagca 268
             ||||||||||||||||||||
Sbjct: 42137 tgttctggagaggtcaagca 42156

>dbj|AK086332.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930021N14 product:unclassifiable, full
            insert sequence
          Length = 2283

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  acaatgagaccaagaggaat 452
            ||||||||||||||||||||
Sbjct: 1671 acaatgagaccaagaggaat 1690

>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191463

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   atgacaatgagaccaagagg 449
             ||||||||||||||||||||
Sbjct: 75621 atgacaatgagaccaagagg 75640

>dbj|AP004497.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029b,
             complete sequence
          Length = 34910

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tatgagcaaaacatataatg 31
             ||||||||||||||||||||
Sbjct: 27407 tatgagcaaaacatataatg 27426

>emb|AL807804.16| Mouse DNA sequence from clone RP23-134H12 on chromosome 4, complete
             sequence
          Length = 206748

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   acaatgagaccaagaggaat 452
             ||||||||||||||||||||
Sbjct: 76935 acaatgagaccaagaggaat 76916


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,074,754
Number of Sequences: 3902068
Number of extensions: 4074754
Number of successful extensions: 76515
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76427
Number of HSP's gapped (non-prelim): 87
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)