ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags8o12 |
|---|---|
| Clone Library Name | barley_pub |
>MKTX1_MESMA (P56569) Makatoxin-1 (Makatoxin I) (MkTx I)| Length = 64 Score = 31.2 bits (69), Expect = 1.4 Identities = 13/47 (27%), Positives = 19/47 (40%) Frame = +3 Query: 279 LSILCESMACKECKKPSSSAWSSNWRPLCWSSTLPSSLLLRYVGCCR 419 L+ C + K K W+ + CW LP + +R G CR Sbjct: 18 LNPYCNDLCTKNGAKSGYCQWAGRYGNACWCIDLPDKVPIRISGSCR 64
>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated| protein 5.11) (Ultrahigh sulfur keratin-associated protein 5.11) Length = 156 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 Query: 219 SESCCR*YCPCSGEVKQIHPLSILCESMACKECKKPSSSAWSSNWRPLCWSST 377 S S C +C S K S C+S CK C SS SS ++P C S+ Sbjct: 93 SSSGCGSFCCQSSCSKPCCCQSSCCQSSCCKPCCCQSSCCQSSCFKPCCCQSS 145
>CQ028_HUMAN (Q8IV36) Protein C17orf28 (Down-regulated in multiple cancers-1)| Length = 788 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Frame = +3 Query: 297 SMACKECKKPSSSAWSSNWRP-----LCWSSTLPSSLLLR 401 S A +E ++PS+S+ S W P L W S LP ++R Sbjct: 660 SQAWREQRRPSTSSASGQWSPTPEWVLSWKSKLPLQTIMR 699
>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein| 5.3) (Ultrahigh sulfur keratin-associated protein 5.3) (Keratin-associated protein 5-9) (Keratin-associated protein 5.9) (UHS KerB-like) Length = 238 Score = 30.4 bits (67), Expect = 2.5 Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 7/81 (8%) Frame = +3 Query: 198 CEKKKSPSESCCR*YCPCSGEVKQIHPL-------SILCESMACKECKKPSSSAWSSNWR 356 C K SCC+ PC + P S C+S CK C SS + Sbjct: 150 CCKPSCSQSSCCK---PCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCC-----K 201 Query: 357 PLCWSSTLPSSLLLRYVGCCR 419 P C SS SS CC+ Sbjct: 202 PCCCSSGCGSSCC--QSSCCK 220
>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I| Length = 926 Score = 29.3 bits (64), Expect = 5.5 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = +3 Query: 279 LSILCESMACKECKKPSSSAWSSNWRP--LCWSSTLPSSLLLRYVGCCRDGVHD 434 L +LC ++ K SS SS+ R LC+ STLP+ LL+RY+ +HD Sbjct: 728 LPLLCLALT-KHTGFRRSSHISSDLRSIALCYLSTLPTPLLMRYIYPTLYSLHD 780
>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Frame = -1 Query: 169 TSERLCDPIASTRVFLPVDRNH------HQSLTWYKLHALIFRTSLIYTNIKH 29 T+E LC F P RNH HQ ++ +L+ ++S Y NI++ Sbjct: 640 TTEELCRRWMQLGAFYPFSRNHNADGFEHQDPAFFGQDSLLVKSSRHYLNIRY 692
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 28.9 bits (63), Expect = 7.2 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Frame = +3 Query: 198 CEKKKSPS---ESCCR*YCPCSGEVKQIHPLSILCESMACKE-CKKPSSS-AWSSNWRPL 362 C +PS +S C+ C S +Q + + C+++ CK C + SSS S+ +P Sbjct: 200 CISSCTPSCCQQSSCQPACCTSSSCQQACCVPVCCKTVCCKPVCSEDSSSCCQQSSCQPA 259 Query: 363 CWSSTLPSSLLLRYVGCCR 419 C +S+ P CC+ Sbjct: 260 CCTSS-PCQQACCVPVCCK 277
>SCM2_MESMA (P58488) Neurotoxin BmK-M2 (BmK M2) (BmKM2)| Length = 64 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/42 (28%), Positives = 18/42 (42%) Frame = +3 Query: 291 CESMACKECKKPSSSAWSSNWRPLCWSSTLPSSLLLRYVGCC 416 C ++ K K WS + CW LP ++ +R G C Sbjct: 22 CNNLCTKNGAKSGYCQWSGKYGNGCWCIELPDNVPIRVPGKC 63
>YBBP_ECOLI (P77504) Hypothetical protein ybbP| Length = 804 Score = 28.5 bits (62), Expect = 9.4 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -3 Query: 275 MDLLDLSRTGAVLAATRLTWAFFF 204 M+L D+ +TGAV +R+TW + F Sbjct: 176 MNLADVDKTGAVQPGSRVTWRYKF 199
>ENV_HV1BN (P12488) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 852 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +1 Query: 163 LR*FYNKVNFWNARKKKAQVSLVAASTAPVLERSSRSI 276 L+ ++N + +W+ K + VSL+ A+ V ER+ R+I Sbjct: 789 LKYWWNLLQYWSQELKNSAVSLLNATAIAVGERTDRAI 826
>NEL_CHICK (Q90827) Protein NEL precursor (93 kDa protein)| Length = 816 Score = 28.5 bits (62), Expect = 9.4 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = +3 Query: 195 ECEKKKS---PSESCCR*YCPCSGEVKQIHPLSILCESMACKECKKPSSSAWSSNWRPLC 365 EC+ K P +SC CP S ++ PLS C CK CK N C Sbjct: 360 ECKDHKMQRIPKDSCATLNCPESQQI----PLSHSC----CKICKGHDFCTEGHN----C 407 Query: 366 WSSTLPSSLLLRYVGCCRDG 425 ++ +L R V CRDG Sbjct: 408 MEHSVCRNLDDRAVCSCRDG 427
>PPCE_MOUSE (Q9QUR6) Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving| enzyme) (PE) Length = 710 Score = 28.5 bits (62), Expect = 9.4 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 8/99 (8%) Frame = -1 Query: 391 KLEGRVELQHKGRQLLLQA-EDDGFLHSLHAIDSQRMDSG------WICLTSPEQGQY*R 233 K G EL GR +LL E ++ L D Q+ +G W+ L +G+Y Sbjct: 233 KWMGGAELSDDGRYVLLSIWEGCDPVNRLWYCDLQQEPNGITGILKWVKLIDNFEGEYDY 292 Query: 232 QQDSLGLFFFSHSKNSPCCRITSERLCDPIAST-RVFLP 119 + +F F ++NSP R+ + DP S +V +P Sbjct: 293 VTNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWKVLVP 331
>SCX28_BUTSI (P84614) Alpha toxin Bs-Tx28| Length = 65 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/43 (27%), Positives = 16/43 (37%) Frame = +3 Query: 291 CESMACKECKKPSSSAWSSNWRPLCWSSTLPSSLLLRYVGCCR 419 C + K + W W CW LP + +R G CR Sbjct: 23 CNTECTKNGAESGYCQWFGRWGNGCWCIKLPDKVPIRIPGKCR 65
>SCA3_MESMA (Q9GUA7) Alpha-toxin 3 precursor (BmKalpha3)| Length = 85 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Frame = +3 Query: 312 ECKKPSSSA----WSSNWRPLCWSSTLPSSLLLRYVGCCRDG 425 ECKK + + W+ + CW LP + +R G C G Sbjct: 44 ECKKKGAESGYCQWAGVYGNACWCYKLPDKVPIRVPGKCNGG 85
>MKTX3_MESMA (P59853) Makatoxin-3 precursor (Makatoxin III) (MkTx III)| Length = 85 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/46 (26%), Positives = 18/46 (39%) Frame = +3 Query: 279 LSILCESMACKECKKPSSSAWSSNWRPLCWSSTLPSSLLLRYVGCC 416 L+ C + K K W+ + CW LP + +R G C Sbjct: 37 LNPYCNDLCTKNGAKSGYCQWAGRYGNACWCIDLPDKVPIRIPGPC 82
>MKTX2_MESMA (Q86BW9) Makatoxin-2 precursor (Makatoxin II) (MkTx II)| Length = 85 Score = 28.5 bits (62), Expect = 9.4 Identities = 11/43 (25%), Positives = 17/43 (39%) Frame = +3 Query: 291 CESMACKECKKPSSSAWSSNWRPLCWSSTLPSSLLLRYVGCCR 419 C + + K W+ + CW LP + +R G CR Sbjct: 41 CNDLCTENGAKSGYCQWAGRYGNACWCIDLPDKVPIRIPGPCR 83 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,662,785 Number of Sequences: 219361 Number of extensions: 1291738 Number of successful extensions: 3455 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3375 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3452 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
