ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 97.6 bits (49), Expect = 5e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 111 taagtactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagt 170 |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 108677 taagtactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagt 108618 Query: 171 t 171 | Sbjct: 108617 t 108617 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 ||||||||| ||||||| ||||||||| ||||||||||||| |||||| |||||| Sbjct: 108588 tactccctctgtcccaaaataagtgactcaactttgtactaaagttagtataaagtt 108644
>gb|AY821694.1| Crithopsis delileana beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1521 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||||||||||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 1201 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagtt 1257
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||||||| ||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 128596 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagtt 128652 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||||| ||||||| ||| || || || ||||||||||||||||||||||||| Sbjct: 78751 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagtt 78695 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 ||||||| ||||||| ||||| || |||| ||||||||||||| ||||||||||||| Sbjct: 128684 aagtacttcctccattccaaaatagatgacccaactttgtactaaagttagtacaaagtt 128625
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||||| ||||||| ||||||||| ||||||||||||| ||||| ||||||| Sbjct: 81478 tactccctccgtcccaaaataagtgactcaactttgtactaaagttagtgcaaagtt 81534 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 139 gactgaactttgtactaactttagtacaaagtt 171 |||| ||||||| |||||||||||||||||||| Sbjct: 81539 gactcaactttgcactaactttagtacaaagtt 81507 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||||| | |||| ||| || || |||||||||||| || |||||||||||| Sbjct: 206022 tactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagtt 206078
>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds Length = 20754 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 138 tgactgaactttgtactaactttagtacaaagtt 171 ||||| |||||||||||||||||||||||||||| Sbjct: 3666 tgactcaactttgtactaactttagtacaaagtt 3699
>emb|AJ400712.1|TAE400712 Triticum aestivum vp1A gene for VIVIPAROUS1, exons 1-6 Length = 4349 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgta 152 |||||||||| ||||||||||||||||| ||||||||| Sbjct: 3428 tactccctccgtcccaaattaagtgactcaactttgta 3465 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 113 agtactccctccatcccaaattaagtgact 142 |||||||||||| ||||| ||||||||||| Sbjct: 3538 agtactccctccgtcccatattaagtgact 3509
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 107 aaaataagtactccctccatcccaaattaagtg 139 |||||||||||||||||||||||||| |||||| Sbjct: 22524006 aaaataagtactccctccatcccaaaataagtg 22524038 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 107 aaaataagtactccctccatcccaaattaagtg 139 |||||||||||||||||||||||||| |||||| Sbjct: 22495278 aaaataagtactccctccatcccaaaataagtg 22495246 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 109 aataagtactccctccatcccaaattaagtg 139 |||||||||||||||| ||||||| |||||| Sbjct: 23320454 aataagtactccctccgtcccaaaataagtg 23320484 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaa 136 |||||||||||||||| ||||||||| Sbjct: 3018523 taagtactccctccattccaaattaa 3018548 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 13925652 aagtactccctccatcccaaa 13925672 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 5963112 aagtactccctccatcccaaa 5963132 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 4205614 tactccctccatcccaaaataagtg 4205638 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 2688652 tactccctccatcccaaatta 2688632
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 107 aaaataagtactccctccatcccaaattaagtg 139 |||||||||||||||||||||||||| |||||| Sbjct: 132411 aaaataagtactccctccatcccaaaataagtg 132379
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 126 tcccaaattaagtgactgaactttgtactaacttta 161 ||||||| ||||||||| |||||||||||||||||| Sbjct: 66252 tcccaaaataagtgactcaactttgtactaacttta 66287
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtact 154 |||||||||| |||||||||||||| || ||||||||||| Sbjct: 68190 tactccctccgtcccaaattaagtgtctcaactttgtact 68229
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and complete cds Length = 3856 Score = 54.0 bits (27), Expect = 7e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaa 168 ||||||||||| ||||||| ||| || || |||||||||||| || ||||||||| Sbjct: 1002 gtactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaa 948
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaagtgac 141 |||||||||||||||||||||| |||||||| Sbjct: 13120437 taagtactccctccatcccaaaataagtgac 13120467 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 108 aaataagtactccctccatcccaaattaa 136 ||||||||||| ||||||||||||||||| Sbjct: 7045911 aaataagtactacctccatcccaaattaa 7045883 Score = 48.1 bits (24), Expect = 0.041 Identities = 27/28 (96%) Strand = Plus / Plus Query: 105 tcaaaataagtactccctccatcccaaa 132 |||||||||||||| ||||||||||||| Sbjct: 34646491 tcaaaataagtactacctccatcccaaa 34646518 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 caaaataagtactccctccat 126 ||||||||||||||||||||| Sbjct: 18496524 caaaataagtactccctccat 18496544 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 aaataagtactccctccatcccaaa 132 |||||| |||||||||||||||||| Sbjct: 9514518 aaataaatactccctccatcccaaa 9514494 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 caaaataagtactccctccat 126 ||||||||||||||||||||| Sbjct: 7377116 caaaataagtactccctccat 7377096 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 6526958 tactccctccatcccaaatta 6526938 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 6008946 aagtactccctccatcccaaa 6008926
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaagtgac 141 |||||||||||||||||||||| |||||||| Sbjct: 97014 taagtactccctccatcccaaaataagtgac 97044
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtta 172 |||||||||||||||||| |||||| | || |||||| || |||||||| ||||||| Sbjct: 117199 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagtta 117142
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 109 aataagtactccctccatcccaaatt 134 |||||||||||||||||||||||||| Sbjct: 29918 aataagtactccctccatcccaaatt 29893
>gb|AF091802.1|AF091802 Aegilops tauschii starch synthase I gene, complete cds Length = 11387 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 138 tgactgaactttgtactaactttagtacaaagttagta 175 ||||| ||||||||||||||| ||||||||| |||||| Sbjct: 2072 tgactcaactttgtactaactatagtacaaaattagta 2035 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaattaagtgactgaactttgtactaa 156 ||||||||||||| | ||||| || ||||| ||||||||||||| Sbjct: 1996 aagtactccctccgttccaaaatagatgactcaactttgtactaa 2040
>gb|U29095.1|U29095 Triticum aestivum serine-threonine protein kinase (TaPK3) gene, exons 3 through 9 and complete cds Length = 2250 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaa 156 |||||||||| |||| || ||||||||| ||||||||||||| Sbjct: 435 tactccctccgtcccgaaataagtgactcaactttgtactaa 394
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 50.1 bits (25), Expect = 0.010 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||||| ||||||| |||||| || |||||||||||| | |||||||||||| Sbjct: 50398 tactccctcc-tcccaaaataagtgtctcaactttgtactagttctagtacaaagtt 50453
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 108 aaataagtactccctccatcccaaattaa 136 ||||||||||| ||||||||||||||||| Sbjct: 49330 aaataagtactacctccatcccaaattaa 49302
>gb|AF181455.1|AF181455 Hordeum vulgare dehydrin (Dhn5) gene, complete cds Length = 3447 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaattaagtgactgaa 145 |||||||||||| ||||||| |||||||||||| Sbjct: 2996 agtactccctccgtcccaaaataagtgactgaa 3028
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 109 aataagtactccctccatcccaaa 132 |||||||||||||||||||||||| Sbjct: 115526 aataagtactccctccatcccaaa 115549
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 109 aataagtactccctccatcccaaa 132 |||||||||||||||||||||||| Sbjct: 6102 aataagtactccctccatcccaaa 6125
>gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene, complete cds Length = 2513 Score = 48.1 bits (24), Expect = 0.041 Identities = 45/52 (86%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaattaagtgactgaactttgtactaactttagta 164 |||||||||||| ||||||| ||| || || |||||||||||| || ||||| Sbjct: 1308 agtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 1359
>gb|AF509745.1| Hordeum vulgare subsp. vulgare Steptoe receptor-like kinase gene, complete cds Length = 2550 Score = 48.1 bits (24), Expect = 0.041 Identities = 45/52 (86%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaattaagtgactgaactttgtactaactttagta 164 |||||||||||| ||||||| ||| || || |||||||||||| || ||||| Sbjct: 1333 agtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 1384
>gb|AF509744.1| Hordeum vulgare subsp. vulgare Morex receptor-like kinase gene, complete cds Length = 4643 Score = 48.1 bits (24), Expect = 0.041 Identities = 45/52 (86%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaattaagtgactgaactttgtactaactttagta 164 |||||||||||| ||||||| ||| || || |||||||||||| || ||||| Sbjct: 2034 agtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 2085
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 109 aataagtactccctccatcccaaa 132 |||||||||||||||||||||||| Sbjct: 2390207 aataagtactccctccatcccaaa 2390230 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aaaataagtactccctccatc 127 ||||||||||||||||||||| Sbjct: 23686590 aaaataagtactccctccatc 23686570
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.041 Identities = 27/28 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaagt 138 |||||||||||||||||||||| ||||| Sbjct: 1803396 taagtactccctccatcccaaaataagt 1803423 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 15870689 tactccctccatcccaaaataagtg 15870713 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 14510858 aagtactccctccatcccaaa 14510878 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 11437464 aagtactccctccatcccaaa 11437484 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 9512099 tactccctccatcccaaatta 9512119 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 7847977 tactccctccatcccaaaataagtg 7848001
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 48.1 bits (24), Expect = 0.041 Identities = 27/28 (96%) Strand = Plus / Plus Query: 105 tcaaaataagtactccctccatcccaaa 132 |||||||||||||| ||||||||||||| Sbjct: 3442 tcaaaataagtactacctccatcccaaa 3469
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1227_D07 Length = 118358 Score = 48.1 bits (24), Expect = 0.041 Identities = 27/28 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaagt 138 |||||||||||||||||||||| ||||| Sbjct: 42058 taagtactccctccatcccaaaataagt 42085
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 48.1 bits (24), Expect = 0.041 Identities = 27/28 (96%) Strand = Plus / Plus Query: 105 tcaaaataagtactccctccatcccaaa 132 |||||||||||||| ||||||||||||| Sbjct: 113106 tcaaaataagtactacctccatcccaaa 113133
>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence Length = 103167 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaatt 134 ||||||||||||||||||||||| Sbjct: 37575 aagtactccctccatcccaaatt 37597 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 46185 tactccctccatcccaaatta 46205
>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence Length = 125927 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaatt 134 ||||||||||||||||||||||| Sbjct: 104308 aagtactccctccatcccaaatt 104330
>gb|AC124798.5| Homo sapiens chromosome 11, clone RP1-239B22, complete sequence Length = 141199 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaagactatgc 318 ||||||||||||||||||| ||||||| Sbjct: 43938 acacacgcacacacaaaaacactatgc 43912
>gb|AC126785.11| Medicago truncatula clone mth2-9i24, complete sequence Length = 132702 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 38922 agtactccctccatcccaaatta 38944
>emb|AL450398.9| Human DNA sequence from clone RP11-202P11 on chromosome 10 Contains the 3'end of a novel gene containing FLJ40604 and FLJ40930, complete sequence Length = 55063 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaagact 314 ||||||||||||||||||||||| Sbjct: 15655 acacacgcacacacaaaaagact 15633
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaatt 134 ||||||||||||||||||||||| Sbjct: 27062 aagtactccctccatcccaaatt 27084 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 113 agtactccctccatcccaaatt 134 |||||||||||||||||||||| Sbjct: 88720 agtactccctccatcccaaatt 88699
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaattaagt 138 ||||||||||||||||||||| ||||| Sbjct: 14135414 aagtactccctccatcccaaaataagt 14135388 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 19375600 gtactccctccatcccaaatta 19375621 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 7901503 gtactccctccatcccaaaataagtg 7901528 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaa 132 |||||||||||||||||||||| Sbjct: 6920904 taagtactccctccatcccaaa 6920925 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaattaagt 138 ||||||||||| ||||||||||||| Sbjct: 2615456 gtactccctccgtcccaaattaagt 2615480
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 16142667 agtactccctccatcccaaatta 16142689 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 16062445 agtactccctccatcccaaatta 16062467 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 15836089 agtactccctccatcccaaatta 15836111 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 106 caaaataagtactccctccatcccaaa 132 ||||| ||||||||||||||||||||| Sbjct: 5664753 caaaagaagtactccctccatcccaaa 5664727 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 aaataagtactccctccatcccaaa 132 ||||| ||||||||||||||||||| Sbjct: 27294086 aaatatgtactccctccatcccaaa 27294110 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 22693380 tactccctccatcccaaatta 22693360 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 taagtactccctccatcccaaatta 135 ||||||||||||||||| ||||||| Sbjct: 16356629 taagtactccctccatctcaaatta 16356605 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 4593046 tactccctccatcccaaatta 4593066 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 3624309 aagtactccctccatcccaaa 3624329 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 2084507 tactccctccatcccaaatta 2084527 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 agtactccctccatcccaaattaag 137 |||||||||||||||||||| |||| Sbjct: 2062195 agtactccctccatcccaaaataag 2062171
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 106 caaaataagtactccctccatcccaaa 132 |||||||| |||||||||||||||||| Sbjct: 24606949 caaaataaatactccctccatcccaaa 24606923 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaa 136 |||||||||||||||||||||| Sbjct: 13970558 tactccctccatcccaaattaa 13970537 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 9591485 gtactccctccatcccaaaataagtg 9591460 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 42793048 aagtactccctccatcccaaa 42793068 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 41086043 tactccctccatcccaaaataagtg 41086067 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 40173697 tactccctccatcccaaatta 40173717 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 33246379 tactccctccatcccaaaataagtg 33246355 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 caaaataagtactccctccatccca 130 ||||||||||||||||||| ||||| Sbjct: 31488913 caaaataagtactccctccgtccca 31488937 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 14516039 aagtactccctccatcccaaa 14516059
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 106 caaaataagtactccctccatcccaaa 132 |||||||| |||||||||||||||||| Sbjct: 32912 caaaataaatactccctccatcccaaa 32886
>dbj|AP004375.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475C12 Length = 140863 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 134484 agtactccctccatcccaaatta 134506
>dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0457B11 Length = 144015 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 109 aataagtactccctccatcccaaattaagtg 139 |||||||||||||||| ||||||| |||||| Sbjct: 39427 aataagtactccctccgtcccaaaataagtg 39457
>dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012O03 Length = 141860 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 16132 agtactccctccatcccaaatta 16154
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 106 caaaataagtactccctccatcccaaa 132 ||||| ||||||||||||||||||||| Sbjct: 120129 caaaagaagtactccctccatcccaaa 120103
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 106 caaaataagtactccctccatcccaaa 132 ||||| ||||||||||||||||||||| Sbjct: 19378 caaaagaagtactccctccatcccaaa 19352
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0404D10 Length = 155069 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 150545 agtactccctccatcccaaatta 150567
>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0028A18 Length = 151080 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 80747 agtactccctccatcccaaatta 80769 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatta 135 ||||||||||||||||||||||| Sbjct: 525 agtactccctccatcccaaatta 547
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||| ||| ||||||| |||||| || || ||| ||||||| |||||||||||| Sbjct: 3665 agtactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagtt 3723
>gb|AC003969.1|AC003969 Homo sapiens Chromosome 11p14.3 PAC clone pDJ239b22, complete sequence Length = 141190 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 292 acacacgcacacacaaaaagactatgc 318 ||||||||||||||||||| ||||||| Sbjct: 97259 acacacgcacacacaaaaacactatgc 97285
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaattaagt 138 ||||||||||||||||||||| ||||| Sbjct: 14089694 aagtactccctccatcccaaaataagt 14089668 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 19301827 gtactccctccatcccaaatta 19301848 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 7901384 gtactccctccatcccaaaataagtg 7901409 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaa 132 |||||||||||||||||||||| Sbjct: 6920783 taagtactccctccatcccaaa 6920804 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaattaagt 138 ||||||||||| ||||||||||||| Sbjct: 2615400 gtactccctccgtcccaaattaagt 2615424
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaattaagt 138 ||||||||||||||||||||| ||||| Sbjct: 61955 aagtactccctccatcccaaaataagt 61929
>gb|AF527807.1| Sorghum bicolor clone BAC SB_BBc0126P21 php200725 orthologous region Length = 75840 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 agtactccctccatcccaaatt 134 |||||||||||||||||||||| Sbjct: 58614 agtactccctccatcccaaatt 58635
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07, complete sequence Length = 157463 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 70443 gtactccctccatcccaaaataagtg 70468
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 109 aataagtactccctccatcccaaattaagt 138 |||||||||||||||| ||||||| ||||| Sbjct: 129774 aataagtactccctccgtcccaaaataagt 129745
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gtactaactttagtacaaagtt 171 |||||||||||||||||||||| Sbjct: 22325 gtactaactttagtacaaagtt 22304
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gtactaactttagtacaaagtt 171 |||||||||||||||||||||| Sbjct: 1422 gtactaactttagtacaaagtt 1401
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gtactaactttagtacaaagtt 171 |||||||||||||||||||||| Sbjct: 1423 gtactaactttagtacaaagtt 1402
>gb|AC146709.11| Medicago truncatula clone mth2-90m14, complete sequence Length = 110472 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 56042 gtactccctccatcccaaatta 56063
>gb|AC125479.16| Medicago truncatula clone mth2-7f11, complete sequence Length = 114214 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 ataagtactccctccatcccaaatta 135 ||||||||| |||||||||||||||| Sbjct: 33356 ataagtacttcctccatcccaaatta 33381 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 33685 tactccctccatcccaaatta 33665
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 tacggtccaaaggcacccacaa 271 |||||||||||||||||||||| Sbjct: 26884 tacggtccaaaggcacccacaa 26905
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 54697 gtactccctccatcccaaaataagtg 54672
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 111 taagtactccctccatcccaaattaa 136 |||||| ||||||||||||||||||| Sbjct: 2571 taagtattccctccatcccaaattaa 2546
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete sequence Length = 137366 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaa 132 |||||||||||||||||||||| Sbjct: 72056 taagtactccctccatcccaaa 72077
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaa 136 |||||| ||||||||||||||||||| Sbjct: 28664 taagtattccctccatcccaaattaa 28689
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 62498 gtactccctccatcccaaaataagtg 62473
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 17476429 gtactccctccatcccaaaataagtg 17476454 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 1158891 gtactccctccatcccaaaataagtg 1158866
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 21630594 gtactccctccatcccaaaataagtg 21630569 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 taagtactccctccatcccaaa 132 |||||||||||||||||||||| Sbjct: 19705456 taagtactccctccatcccaaa 19705435 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaa 136 |||||| ||||||||||||||||||| Sbjct: 19076093 taagtattccctccatcccaaattaa 19076118 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 11308054 tactccctccatcccaaatta 11308034 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 3093909 tactccctccatcccaaatta 3093889 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 757274 aagtactccctccatcccaaa 757294
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 27067827 gtactccctccatcccaaatta 27067806 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 20487484 tactccctccatcccaaatta 20487464 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 6860638 tactccctccatcccaaatta 6860658
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 109 aataagtactccctccatcccaaattaagt 138 |||||||||||||||| ||||||| ||||| Sbjct: 26278726 aataagtactccctccgtcccaaaataagt 26278697 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 10799243 aagtactccctccatcccaaa 10799223 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 3571778 tactccctccatcccaaatta 3571798
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 124914 gtactccctccatcccaaaataagtg 124889
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 29488 gtactccctccatcccaaaataagtg 29463
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaa 136 |||||||||||||||| ||||||||| Sbjct: 106472 taagtactccctccattccaaattaa 106497
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaa 136 |||||||||||||||||||||| Sbjct: 130860 tactccctccatcccaaattaa 130839
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaa 136 |||||||||||||||||||||| Sbjct: 46303 tactccctccatcccaaattaa 46282
>emb|BX004813.5| Zebrafish DNA sequence from clone CH211-55K22 in linkage group 8, complete sequence Length = 148955 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gggaacacacgcacacacaaaa 309 |||||||||||||||||||||| Sbjct: 31677 gggaacacacgcacacacaaaa 31698
>gb|AY946409.1| Oryza sativa microRNA MIR433-438e precursor, gene, partial sequence Length = 260 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 253 gtactccctccatcccaaaataagtg 228
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 71068 gtactccctccatcccaaatta 71047
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 186104 gtactccctccatcccaaatta 186125
>emb|BX005105.6| Zebrafish DNA sequence from clone DKEY-37M8 in linkage group 22, complete sequence Length = 171403 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 174 tagccattagcaatttagcatacagg 199 ||||||||||||||||||||| |||| Sbjct: 168419 tagccattagcaatttagcatccagg 168394
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 21642257 gtactccctccatcccaaaataagtg 21642232 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 taagtactccctccatcccaaa 132 |||||||||||||||||||||| Sbjct: 19716732 taagtactccctccatcccaaa 19716711 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 taagtactccctccatcccaaattaa 136 |||||| ||||||||||||||||||| Sbjct: 19087369 taagtattccctccatcccaaattaa 19087394 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 11314494 tactccctccatcccaaatta 11314474 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 3093830 tactccctccatcccaaatta 3093810 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 757271 aagtactccctccatcccaaa 757291
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 17570139 gtactccctccatcccaaaataagtg 17570164 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 1156612 gtactccctccatcccaaaataagtg 1156587
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 taagtactccctccatcccaaa 132 |||||||||||||||||||||| Sbjct: 41134 taagtactccctccatcccaaa 41113
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtg 139 ||||||||||||||||||| |||||| Sbjct: 98667 gtactccctccatcccaaaataagtg 98642
>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131975 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 81291 gtactccctccatcccaaatta 81312
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 gtactccctccatcccaaatta 135 |||||||||||||||||||||| Sbjct: 53294 gtactccctccatcccaaatta 53315
>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790 Length = 626829 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 602 cagcatatatctatcagcatct 623 |||||||||||||||||||||| Sbjct: 553844 cagcatatatctatcagcatct 553823
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 44.1 bits (22), Expect = 0.64 Identities = 40/46 (86%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaacttt 160 |||||||||| | ||||| || ||||| ||||||||||||||||| Sbjct: 6919 tactccctccgttccaaaatagatgactcaactttgtactaacttt 6874
>gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1653_D06, complete sequence Length = 71193 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 16175 aagtactccctccatcccaaa 16155
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 183843 aagtactccctccatcccaaa 183823
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 102606 tactccctccatcccaaatta 102586
>gb|AC005354.1| Homo sapiens chromosome 5, P1 clone 1320c6 (LBNL H59), complete sequence Length = 28065 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 cacacgcacacacaaaaagac 313 ||||||||||||||||||||| Sbjct: 367 cacacgcacacacaaaaagac 387
>gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudogene, partial sequence; SBE I pseudogene, complete sequence; and starch branching enzyme I (SBE I) gene, complete cds Length = 25187 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 1493 tactccctccatcccaaaataagtg 1517
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 38131 aagtactccctccatcccaaa 38151
>gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome 16, complete sequence Length = 232228 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaagactat 316 |||||| |||||||||||||||||| Sbjct: 140022 acacacacacacacaaaaagactat 139998
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 aactttgtactaactttagtacaaagtta 172 |||||||||||| || ||||||||||||| Sbjct: 3856 aactttgtactatctctagtacaaagtta 3828
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 137409 tactccctccatcccaaatta 137429
>gb|AC163741.3| Pan troglodytes BAC clone CH251-406E22 from chromosome unknown, complete sequence Length = 169655 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 acacacgcacacacaaaaaga 312 ||||||||||||||||||||| Sbjct: 70076 acacacgcacacacaaaaaga 70096
>emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box protein (m1 gene) Length = 1086 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 |||||||||| || |||| ||| || || ||||||||| || || |||||||||||| Sbjct: 914 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagtt 970
>gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, complete sequence Length = 183075 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaagactat 316 |||||| |||||||||||||||||| Sbjct: 127745 acacacacacacacaaaaagactat 127721
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 31285452 tactccctccatcccaaatta 31285472 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 30505974 tactccctccatcccaaaataagtg 30505998 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 tccctccatcccaaattaagtgact 142 ||||||||||||||||||| ||||| Sbjct: 4557468 tccctccatcccaaattaaatgact 4557492
>gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete sequence Length = 140523 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagt 138 ||||||||||||| ||||||||||| Sbjct: 74693 gtactccctccattccaaattaagt 74669
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 116042 tactccctccatcccaaatta 116022
>emb|AL022156.2|HS30A23 Human DNA sequence from clone RP6-30A23 on chromosome Xq25 Contains the 5' end of the BIRC4 gene for baculoviral IAP repeat-containing 4, a novel gene and a CpG island, complete sequence Length = 12610 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaaga 312 ||||||||||||||||||||| Sbjct: 11579 acacacgcacacacaaaaaga 11559
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 757274 aagtactccctccatcccaaa 757294
>gb|AC131886.5| Rattus norvegicus 4 BAC CH230-53A1 (Children's Hospital Oakland Research Institute) complete sequence Length = 222634 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 acacacgcacacacaaaaagactat 316 |||||| |||||||||||||||||| Sbjct: 148411 acacacacacacacaaaaagactat 148435
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtgactgaactttgtactaactttagtacaaagtt 171 ||||||||| | ||||| |||||| || |||||||||||| || || ||||||||| Sbjct: 7201 tactccctctcttccaaaataagtgtctcaactttgtactagctctactacaaagtt 7257
>gb|AC166327.1| Mus musculus BAC clone RP23-175K2 from chromosome 16, complete sequence Length = 188081 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaagactat 316 |||||| |||||||||||||||||| Sbjct: 19052 acacacacacacacaaaaagactat 19028
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aaaataagtactccctccatc 127 ||||||||||||||||||||| Sbjct: 7502 aaaataagtactccctccatc 7482
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aaaataagtactccctccatc 127 ||||||||||||||||||||| Sbjct: 129271 aaaataagtactccctccatc 129251
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagtgact 142 ||||||||||| ||||||| ||||||||| Sbjct: 7896 gtactccctccgtcccaaaataagtgact 7868
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 catctttttcttcatataaacattt 582 |||||||||||||| |||||||||| Sbjct: 126754 catctttttcttcaaataaacattt 126778
>gb|AC044784.11| Homo sapiens chromosome 10 clone RP11-428L9, complete sequence Length = 179711 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 aaatattttcactgaaacatctttt 565 ||||||||||| ||||||||||||| Sbjct: 30293 aaatattttcagtgaaacatctttt 30269
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 562 tttttcttcatataaacattt 582 ||||||||||||||||||||| Sbjct: 86879 tttttcttcatataaacattt 86899
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 92693 tactccctccatcccaaatta 92713
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 58401 tactccctccatcccaaatta 58421
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0091J06 from chromosome 10, complete sequence Length = 141911 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 1125 tactccctccatcccaaatta 1105
>gb|AC109454.3| Homo sapiens chromosome 5 clone RP11-215P8, complete sequence Length = 142276 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 cacacgcacacacaaaaagac 313 ||||||||||||||||||||| Sbjct: 40070 cacacgcacacacaaaaagac 40090
>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence Length = 166757 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 63541 tactccctccatcccaaatta 63521
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 37547 tactccctccatcccaaaataagtg 37571
>gb|AC149134.2| Medicago truncatula, complete sequence Length = 133336 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 99683 tactccctccatcccaaatta 99703
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 cctcacgaattccaatcttct 702 ||||||||||||||||||||| Sbjct: 3761044 cctcacgaattccaatcttct 3761064
>gb|AC011095.5|AC011095 Homo sapiens, clone RP11-1O2, complete sequence Length = 157051 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 catctttttcttcatataaacattt 582 |||||||||||||| |||||||||| Sbjct: 4189 catctttttcttcaaataaacattt 4213
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 31375968 tactccctccatcccaaatta 31375988 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 30597396 tactccctccatcccaaaataagtg 30597420 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 tccctccatcccaaattaagtgact 142 ||||||||||||||||||| ||||| Sbjct: 4557583 tccctccatcccaaattaaatgact 4557607
>gb|AC093753.2| Homo sapiens BAC clone RP11-50C12 from 4, complete sequence Length = 106383 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 ttggcattaaagggttatttc 356 ||||||||||||||||||||| Sbjct: 58147 ttggcattaaagggttatttc 58167
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 tccctccatcccaaattaagtgact 142 ||||||||||||||||||| ||||| Sbjct: 162760 tccctccatcccaaattaaatgact 162784
>dbj|AB125341.2| Staphylococcus warneri plasmid pPI-1 DNA, complete sequence Length = 30201 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 aggcccaagctcaagaatcat 422 ||||||||||||||||||||| Sbjct: 23023 aggcccaagctcaagaatcat 23043
>dbj|AB121757.2| Staphylococcus warneri genes for putative response regulator, NukA, NukM, NukT, NukF, NukE, NukG, NukH, putative plasmid replication-associated protein, putative plasmid replication-associated protein, replication protein, partial and complete cds Length = 11740 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 aggcccaagctcaagaatcat 422 ||||||||||||||||||||| Sbjct: 5700 aggcccaagctcaagaatcat 5720
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 122973 tactccctccatcccaaaataagtg 122997
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 caaaataagtactccctccatccca 130 ||||||||||||||||||| ||||| Sbjct: 1936 caaaataagtactccctccgtccca 1960
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 125813 aagtactccctccatcccaaa 125833
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 116781 tactccctccatcccaaatta 116801
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 39475 tactccctccatcccaaatta 39495
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 caaaataagtactccctccatccca 130 ||||||||||||||||||| ||||| Sbjct: 82977 caaaataagtactccctccgtccca 83001
>gb|AC159218.3| Pan troglodytes BAC clone CH251-59O2 from chromosome unknown, complete sequence Length = 178970 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaaga 312 ||||||||||||||||||||| Sbjct: 5579 acacacgcacacacaaaaaga 5559
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 116894 tactccctccatcccaaatta 116914
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 71152 aagtactccctccatcccaaa 71172
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 50835 tactccctccatcccaaaataagtg 50859
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 143993 tactccctccatcccaaatta 143973
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 100399 tactccctccatcccaaatta 100379
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 9147 aagtactccctccatcccaaa 9167
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 aaataagtactccctccatcccaaa 132 |||||| |||||||||||||||||| Sbjct: 128079 aaataaatactccctccatcccaaa 128055
>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031J07 Length = 172511 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 42872 aagtactccctccatcccaaa 42892
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 39626 tactccctccatcccaaaataagtg 39602
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 75352 aagtactccctccatcccaaa 75372
>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0064I23 Length = 161865 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 95180 tactccctccatcccaaaataagtg 95204
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 84764 aagtactccctccatcccaaa 84784
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 33815 tactccctccatcccaaaataagtg 33839
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 78037 tactccctccatcccaaatta 78057 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 agtactccctccatcccaaattaag 137 |||||||||||||||||||| |||| Sbjct: 55725 agtactccctccatcccaaaataag 55701
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 154772 tactccctccatcccaaatta 154792
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077J18 Length = 180944 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 68594 tactccctccatcccaaatta 68574
>dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1711_D06 Length = 87613 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 caaaataagtactccctccat 126 ||||||||||||||||||||| Sbjct: 20157 caaaataagtactccctccat 20137
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 29785 aagtactccctccatcccaaa 29765
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 87571 tactccctccatcccaaatta 87551
>dbj|BS000135.1| Pan troglodytes chromosome 22 clone:RP43-114M01, map 22, complete sequences Length = 73133 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 gatgaaaatgatcccagcata 608 ||||||||||||||||||||| Sbjct: 27125 gatgaaaatgatcccagcata 27145
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 75735 tactccctccatcccaaatta 75755
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 caaaataagtactccctccat 126 ||||||||||||||||||||| Sbjct: 37663 caaaataagtactccctccat 37683
>gb|AY946449.1| Oryza sativa microRNA MIR433a-26 precursor, gene, partial sequence Length = 230 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||| |||||| Sbjct: 2 tactccctccatcccaaaataagtg 26
>dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577G06 Length = 58137 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 7551 tactccctccatcccaaatta 7571
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 20022 tactccctccatcccaaatta 20002
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 62174 tactccctccatcccaaatta 62154
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 aaataagtactccctccatcccaaa 132 ||||| ||||||||||||||||||| Sbjct: 117289 aaatatgtactccctccatcccaaa 117313
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 taagtactccctccatcccaaatta 135 ||||||||||||||||| ||||||| Sbjct: 62481 taagtactccctccatctcaaatta 62457
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagtactccctccatcccaaa 132 ||||||||||||||||||||| Sbjct: 102815 aagtactccctccatcccaaa 102835
>emb|AJ303198.1|DCA303198 Daucus carota sut1a gene for sucrose/proton symporter, exons 1-6 Length = 12615 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 3937 tactccctccatcccaaatta 3917
>dbj|AK066347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065B13, full insert sequence Length = 3637 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 2670 tactccctccatcccaaatta 2690
>emb|BX470234.8| Zebrafish DNA sequence from clone DKEY-94N12 in linkage group 22, complete sequence Length = 149941 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 acacacgcacacacaaaaaga 312 ||||||||||||||||||||| Sbjct: 141488 acacacgcacacacaaaaaga 141508
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tactccctccatcccaaatta 135 ||||||||||||||||||||| Sbjct: 16893 tactccctccatcccaaatta 16913
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 cctcacgaattccaatcttct 702 ||||||||||||||||||||| Sbjct: 512949 cctcacgaattccaatcttct 512929
>dbj|AB076051.1| Petunia x hybrida gene for PMADS3, partial cds Length = 8909 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 tactccctccatcccaaattaagtg 139 |||||||||||||||||||| |||| Sbjct: 566 tactccctccatcccaaattgagtg 542
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 tagcatcaaatattttcactg 554 ||||||||||||||||||||| Sbjct: 1246466 tagcatcaaatattttcactg 1246446
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gtactccctccatcccaaattaagt 138 ||||||||||| ||||||||||||| Sbjct: 52553 gtactccctccgtcccaaattaagt 52529
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete sequence Length = 108612 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 616 cagcatctgctccaactcaat 636 ||||||||||||||||||||| Sbjct: 86692 cagcatctgctccaactcaat 86712
>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence Length = 195904 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 tgaaggccagcaacgggcaag 391 ||||||||||||||||||||| Sbjct: 128698 tgaaggccagcaacgggcaag 128718
>gb|AY886519.1| Homo sapiens baculoviral IAP repeat-containing 4 (BIRC4) gene, complete cds Length = 57320 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 acacacgcacacacaaaaaga 312 ||||||||||||||||||||| Sbjct: 12294 acacacgcacacacaaaaaga 12274
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 aactttgtactaactttagtacaaagtta 172 |||||||||||| || ||||||||||||| Sbjct: 3904 aactttgtactatctctagtacaaagtta 3876 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,078,850 Number of Sequences: 3902068 Number of extensions: 8078850 Number of successful extensions: 256167 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 248938 Number of HSP's gapped (non-prelim): 7229 length of query: 731 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 708 effective length of database: 17,143,297,704 effective search space: 12137454774432 effective search space used: 12137454774432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
