ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8o07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY104225.1| Zea mays PCO144800 mRNA sequence 78 3e-11
2ref|XM_470484.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
3dbj|AK098951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
4dbj|AK062137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
5ref|XM_507596.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.006
6ref|XM_483430.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
7ref|XM_507301.2| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.006
8dbj|AK121104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
9dbj|AK104593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
10dbj|AK070382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
11dbj|AK061736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
12dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CC... 46 0.100
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.39
14gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 44 0.39
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
17dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
18dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
19ref|XM_481498.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
20gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
21dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22ref|NM_179091.1| Arabidopsis thaliana unknown protein AT4G22890 ... 40 6.1
23ref|NM_179092.1| Arabidopsis thaliana unknown protein AT4G22890 ... 40 6.1
24ref|NM_118418.2| Arabidopsis thaliana unknown protein AT4G22890 ... 40 6.1
25gb|BT000905.1| Arabidopsis thaliana clone C105179 unknown protei... 40 6.1
26emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20... 40 6.1
27gb|AY050904.1| Arabidopsis thaliana At4g22890 mRNA sequence 40 6.1
28emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
29emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
30dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
32gb|AY088992.1| Arabidopsis thaliana clone 13264 mRNA, complete s... 40 6.1
33dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
34dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
35emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.1
36emb|BX544885.3| Mouse DNA sequence from clone RP23-402E14 on chr... 40 6.1
37gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.1

>gb|AY104225.1| Zea mays PCO144800 mRNA sequence
          Length = 939

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 128/158 (81%)
 Strand = Plus / Minus

                                                                       
Query: 246 agtgtgatcagccgagtttttgagtcgtataccatcacggttttgcaatttgcgcacttc 305
           |||||||||| ||||| ||||||||| ||| ||| | ||||  |||||||||| || |||
Sbjct: 561 agtgtgatcacccgagattttgagtcatattccagctcggtactgcaatttgcacatttc 502

                                                                       
Query: 306 acgttgttcgtcgcaccgccgctctcgatcgacagtattgtcccgtagaaggaaagattt 365
           || ||||| || | |||||| ||   ||  |||||||| |||||  |||||||||| |||
Sbjct: 501 actttgtttgttgtaccgccactggagactgacagtatagtcccaaagaaggaaaggttt 442

                                                 
Query: 366 tcagtaccgcaattcggacaaggtcccttcangattaa 403
           |||||||| ||||| ||||| || ||||| | ||||||
Sbjct: 441 tcagtaccacaattaggacatggccccttaaggattaa 404



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>ref|XM_470484.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1318

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 336 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
           ||||| || |||||| |||||||||| |||||||  || ||||||||||| || ||||| 
Sbjct: 933 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggacatggccccttg 874

                     
Query: 396 angattaaga 405
           | ||||||||
Sbjct: 873 aggattaaga 864



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>dbj|AK098951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N16, full
           insert sequence
          Length = 1342

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 336 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
           ||||| || |||||| |||||||||| |||||||  || ||||||||||| || ||||| 
Sbjct: 957 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggacatggccccttg 898

                     
Query: 396 angattaaga 405
           | ||||||||
Sbjct: 897 aggattaaga 888



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>dbj|AK062137.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F08, full
           insert sequence
          Length = 1358

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 336 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
           ||||| || |||||| |||||||||| |||||||  || ||||||||||| || ||||| 
Sbjct: 954 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggacatggccccttg 895

                     
Query: 396 angattaaga 405
           | ||||||||
Sbjct: 894 aggattaaga 885



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>ref|XM_507596.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1191_A10.128 mRNA
          Length = 1442

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 336  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 396  a 396
            |
Sbjct: 988  a 988



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>ref|XM_483430.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1442

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 336  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 396  a 396
            |
Sbjct: 988  a 988



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>ref|XM_507301.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1191_A10.128 mRNA
          Length = 1445

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 336  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 396  a 396
            |
Sbjct: 988  a 988



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>dbj|AK121104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069O17, full
            insert sequence
          Length = 3855

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 336  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 3490 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 3431

             
Query: 396  a 396
            |
Sbjct: 3430 a 3430



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>dbj|AK104593.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B08, full
           insert sequence
          Length = 1378

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 336 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
           |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 984 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 925

            
Query: 396 a 396
           |
Sbjct: 924 a 924



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>dbj|AK070382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D06, full
            insert sequence
          Length = 1445

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 336  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 396  a 396
            |
Sbjct: 988  a 988



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>dbj|AK061736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D09, full
           insert sequence
          Length = 1378

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 336 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 395
           |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 984 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 925

            
Query: 396 a 396
           |
Sbjct: 924 a 924



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>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7,
             LRRC2), complete cds, clone: 0475A03
          Length = 165558

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 100   atatctacagcaaaatcatacta 122
             |||||||||||||||||||||||
Sbjct: 79051 atatctacagcaaaatcatacta 79073



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 336      gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggaca 385
                ||||| || |||||| |||||||||| |||||||  || |||||||||||
Sbjct: 35877237 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggaca 35877286



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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 336   gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggaca 385
             ||||| || |||||| |||||||||| |||||||  || |||||||||||
Sbjct: 83888 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggaca 83839



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 336      gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtccct 393
                |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||
Sbjct: 26176707 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtccct 26176650



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 336      gacagtattgtcccgtagaaggaaagattttca 368
                |||||||| |||||  |||||||||||||||||
Sbjct: 13094986 gacagtatagtcccaaagaaggaaagattttca 13095018



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 336      gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggaca 385
                ||||| || |||||| |||||||||| |||||||  || |||||||||||
Sbjct: 35967367 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggaca 35967416



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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1191_A10
          Length = 140643

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                        
Query: 336    gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtccct 393
              |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||
Sbjct: 120638 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtccct 120581



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>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1014_E06
          Length = 112241

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 336  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtccct 393
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||
Sbjct: 9632 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtccct 9575



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>ref|XM_481498.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 612

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 336 gacagtattgtcccgtagaaggaaagattttca 368
           |||||||| |||||  |||||||||||||||||
Sbjct: 500 gacagtatagtcccaaagaaggaaagattttca 468



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>gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0003M24,
             complete sequence
          Length = 150085

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 336   gacagtattgtcccgtagaaggaaagattttca 368
             |||||||| |||||  |||||||||||||||||
Sbjct: 88465 gacagtatagtcccaaagaaggaaagattttca 88433



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>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone: B1100F03
          Length = 139217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 336   gacagtattgtcccgtagaaggaaagattttca 368
             |||||||| |||||  |||||||||||||||||
Sbjct: 75506 gacagtatagtcccaaagaaggaaagattttca 75538



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>ref|NM_179091.1| Arabidopsis thaliana unknown protein AT4G22890 transcript variant
           AT4G22890.2 mRNA, complete cds
          Length = 1092

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 375 caattcggacaaggtcccttcangattaaga 405
           |||||||||||||| ||||||| ||| ||||
Sbjct: 910 caattcggacaaggacccttcaagatcaaga 880



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>ref|NM_179092.1| Arabidopsis thaliana unknown protein AT4G22890 transcript variant
           AT4G22890.3 mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 375 caattcggacaaggtcccttcangattaaga 405
           |||||||||||||| ||||||| ||| ||||
Sbjct: 995 caattcggacaaggacccttcaagatcaaga 965



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>ref|NM_118418.2| Arabidopsis thaliana unknown protein AT4G22890 transcript variant
           AT4G22890.1 mRNA, complete cds
          Length = 1417

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 375 caattcggacaaggtcccttcangattaaga 405
           |||||||||||||| ||||||| ||| ||||
Sbjct: 995 caattcggacaaggacccttcaagatcaaga 965



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>gb|BT000905.1| Arabidopsis thaliana clone C105179 unknown protein (At4g22890)
           mRNA, complete cds
          Length = 1006

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 375 caattcggacaaggtcccttcangattaaga 405
           |||||||||||||| ||||||| ||| ||||
Sbjct: 824 caattcggacaaggacccttcaagatcaaga 794



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>emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20 on chromosome Xq22.2-22.3,
             complete sequence
          Length = 167943

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   ttgcagacttgacaattcca 168
             ||||||||||||||||||||
Sbjct: 58135 ttgcagacttgacaattcca 58116



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>gb|AY050904.1| Arabidopsis thaliana At4g22890 mRNA sequence
          Length = 1327

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 375 caattcggacaaggtcccttcangattaaga 405
           |||||||||||||| ||||||| ||| ||||
Sbjct: 888 caattcggacaaggacccttcaagatcaaga 858



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>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
             complete sequence
          Length = 150416

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   caaaatcatactacaacaca 129
             ||||||||||||||||||||
Sbjct: 54501 caaaatcatactacaacaca 54520



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>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   caaaatcatactacaacaca 129
             ||||||||||||||||||||
Sbjct: 90087 caaaatcatactacaacaca 90106



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 110      caaaatcatactacaacaca 129
                ||||||||||||||||||||
Sbjct: 32695066 caaaatcatactacaacaca 32695085



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      agtttcattcatgccaatca 81
               ||||||||||||||||||||
Sbjct: 4333839 agtttcattcatgccaatca 4333820



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>gb|AY088992.1| Arabidopsis thaliana clone 13264 mRNA, complete sequence
          Length = 1321

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 375 caattcggacaaggtcccttcangattaaga 405
           |||||||||||||| ||||||| ||| ||||
Sbjct: 993 caattcggacaaggacccttcaagatcaaga 963



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>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1279D09
          Length = 134793

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    agtttcattcatgccaatca 81
             ||||||||||||||||||||
Sbjct: 36657 agtttcattcatgccaatca 36638



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>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0523B07
          Length = 170510

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     agtttcattcatgccaatca 81
              ||||||||||||||||||||
Sbjct: 157598 agtttcattcatgccaatca 157579



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>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete
             sequence
          Length = 76529

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   caaaatcatactacaacaca 129
             ||||||||||||||||||||
Sbjct: 27316 caaaatcatactacaacaca 27335



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>emb|BX544885.3| Mouse DNA sequence from clone RP23-402E14 on chromosome 4, complete
             sequence
          Length = 49635

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    ctaggttttctatacatgca 62
             ||||||||||||||||||||
Sbjct: 17575 ctaggttttctatacatgca 17556



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    acttcacgttgttcgtcgca 320
              ||||||||||||||||||||
Sbjct: 701595 acttcacgttgttcgtcgca 701576


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,528,749
Number of Sequences: 3902068
Number of extensions: 3528749
Number of successful extensions: 147291
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147147
Number of HSP's gapped (non-prelim): 144
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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