| Clone Name | rbags8o11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL445672.15| Human DNA sequence from clone RP11-66D1 on chromosome 9, complete sequence Length = 113031 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 319 ttaattttaattttctgaaagaa 341 ||||||||||||||||||||||| Sbjct: 84891 ttaattttaattttctgaaagaa 84913
>gb|AC092154.3| Homo sapiens BAC clone RP11-264K23 from 7, complete sequence Length = 11278 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 gattaattttaattttctgaa 337 ||||||||||||||||||||| Sbjct: 3600 gattaattttaattttctgaa 3580
>gb|AC145372.7| Medicago truncatula clone mth2-5f4, complete sequence Length = 94647 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 caaatatcagaagaaaaacaa 422 ||||||||||||||||||||| Sbjct: 16335 caaatatcagaagaaaaacaa 16355
>gb|AC011339.5| Homo sapiens chromosome 5 clone CTC-260J12, complete sequence Length = 152560 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 atcagaagaaaaacaacaatg 427 ||||||||||||||||||||| Sbjct: 102225 atcagaagaaaaacaacaatg 102205
>gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete sequence Length = 466370 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 ttgggataccacagtcataca 262 ||||||||||||||||||||| Sbjct: 349173 ttgggataccacagtcataca 349193
>gb|AC116917.2| Homo sapiens chromosome 5 clone RP11-756G12, complete sequence Length = 165764 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 atcagaagaaaaacaacaatg 427 ||||||||||||||||||||| Sbjct: 43883 atcagaagaaaaacaacaatg 43863
>gb|AC131036.4| Mus musculus chromosome 5, clone RP23-358D12, complete sequence Length = 197112 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 tggcaaagttagaaatatca 292 |||||||||||||||||||| Sbjct: 74229 tggcaaagttagaaatatca 74210
>ref|XM_637237.1| Dictyostelium discoideum putative basic-leucine zipper transcription factor (DDB0220090), partial mRNA Length = 2505 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gcaagattaattttaatttt 332 |||||||||||||||||||| Sbjct: 2030 gcaagattaattttaatttt 2011
>gb|AY530756.1| Myxococcus xanthus strain DK1622 ORFA, HthA (hthA), HthB (hthB), and ORFB genes, complete cds Length = 5924 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 atggcgcgctcttgggcatg 557 |||||||||||||||||||| Sbjct: 5230 atggcgcgctcttgggcatg 5211
>gb|AC163275.4| Mus musculus chromosome 5, clone RP23-458G12, complete sequence Length = 176643 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 tggcaaagttagaaatatca 292 |||||||||||||||||||| Sbjct: 119203 tggcaaagttagaaatatca 119184
>emb|AL008868.1|CEC53C7 Caenorhabditis elegans Cosmid C53C7, complete sequence Length = 33630 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 314 caagattaattttaattttctgaaagaa 341 ||||||| ||||||||||||||||||| Sbjct: 26272 caagattttttttaattttctgaaagaa 26245
>gb|AC006459.3| Homo sapiens BAC clone GS1-281N8 from 7, complete sequence Length = 186981 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttaattttaattttctgaaa 338 |||||||||||||||||||| Sbjct: 80799 ttaattttaattttctgaaa 80780
>emb|AL591605.7| Human DNA sequence from clone RP11-476G6 on chromosome 6, complete sequence Length = 137494 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 aaatatcagaagaaaaacaa 422 |||||||||||||||||||| Sbjct: 72096 aaatatcagaagaaaaacaa 72115
>gb|AC144523.2| Homo sapiens BAC clone RP11-1302F12 from UL, complete sequence Length = 190427 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 acattcggaagttgattgag 228 |||||||||||||||||||| Sbjct: 4008 acattcggaagttgattgag 4027
>gb|AC092668.2| Homo sapiens BAC clone RP11-553F8 from 4, complete sequence Length = 167570 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 315 aagattaattttaattttctgaaagaac 342 |||||| ||||| ||||||||||||||| Sbjct: 75482 aagattcattttcattttctgaaagaac 75455
>gb|AC068725.5|AC068725 Homo sapiens chromosome 2 clone RP11-737H13, complete sequence Length = 165560 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 aatgtagagatgatgtggta 489 |||||||||||||||||||| Sbjct: 92513 aatgtagagatgatgtggta 92532
>dbj|AP006724.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-17M1, complete sequence Length = 171460 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 acattcggaagttgattgag 228 |||||||||||||||||||| Sbjct: 136761 acattcggaagttgattgag 136780
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 aagaaaaacaacaatggcaa 431 |||||||||||||||||||| Sbjct: 2096568 aagaaaaacaacaatggcaa 2096549 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,296,447 Number of Sequences: 3902068 Number of extensions: 5296447 Number of successful extensions: 121643 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121585 Number of HSP's gapped (non-prelim): 58 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)