ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags8p06 |
|---|---|
| Clone Library Name | barley_pub |
>MA2B1_HUMAN (O00754) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) [Contains: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase Length = 1010 Score = 63.5 bits (153), Expect = 4e-10 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Frame = -1 Query: 414 LPENVALLTLEELEDGSVLLRLAHLYEAGEH--KDLSALASVDLKRVFPDKKVGKIIETS 241 LP +V LLTL VLLRL H + GE ++LSA +++L+ +F + ++ ET+ Sbjct: 895 LPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRLQETT 954 Query: 240 LSANQERAAMEKKRLKWKV-AGPPPKENVARGGPVDPSKLVVELAPMEIRTFVIS 79 L ANQ R A RLKW GP P + + +DP+ + +E PMEIRTF+ S Sbjct: 955 LVANQLREA--ASRLKWTTNTGPTPHQTPYQ---LDPANITLE--PMEIRTFLAS 1002
>MA2B1_CAVPO (Q8VHC8) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1007 Score = 63.2 bits (152), Expect = 5e-10 Identities = 56/155 (36%), Positives = 83/155 (53%), Gaps = 8/155 (5%) Frame = -1 Query: 519 QELYSPLLLAFAEQDGGNWANSHVSS-----FSAMDPTYSLPENVALLTLEELEDGSVLL 355 +EL +P L+ A G ++ + H + FS + LP +V LLTL ++LL Sbjct: 856 KELLAPQLV-LAPGQGPSYHHDHHEAVPRKQFSGL--RRQLPPSVRLLTLARWGPDTLLL 912 Query: 354 RLAHLYEAGE--HKDLSALASVDLKRVFPDKKVGKIIETSLSANQERAAMEKKRLKWKV- 184 RL H + GE ++LS ++DL+ +F + ++ ET+L+ANQ RA+ RLKW Sbjct: 913 RLEHQFALGEDSSRNLSLPVTLDLQDLFSTFTITRLQETTLAANQLRAS--ASRLKWTTE 970 Query: 183 AGPPPKENVARGGPVDPSKLVVELAPMEIRTFVIS 79 P + V R +DPS + L PMEIRTFV S Sbjct: 971 IDPISRPAVPR---LDPSS--ITLQPMEIRTFVAS 1000
>MA2B1_FELCA (O46432) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1007 Score = 62.8 bits (151), Expect = 6e-10 Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 2/114 (1%) Frame = -1 Query: 414 LPENVALLTLEELEDGSVLLRLAHLYEAGEHK-DLSALASVDLKRVFPDKKVGKIIETSL 238 LP +V LLTL + ++LLRL H + GE +LS+ ++DL +F + + ET+L Sbjct: 894 LPPSVHLLTLARWDQKTLLLRLEHQFAVGEDSGNLSSPVTLDLTDLFSAFTITYLQETTL 953 Query: 237 SANQERAAMEKKRLKWKV-AGPPPKENVARGGPVDPSKLVVELAPMEIRTFVIS 79 ANQ RA+ RLKW GP P + +R +DP+ + L PMEIRTF+ S Sbjct: 954 VANQLRAS--ASRLKWTPNTGPTPLPSPSR---LDPA--TITLQPMEIRTFLAS 1000
>MA2B1_MACFA (Q60HE9) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1012 Score = 62.4 bits (150), Expect = 8e-10 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Frame = -1 Query: 414 LPENVALLTLEELEDGSVLLRLAHLYEAGEH--KDLSALASVDLKRVFPDKKVGKIIETS 241 LP +V LLTL +LLRL H + GE ++LSA +++L+ +F + ++ ET+ Sbjct: 897 LPPSVHLLTLASWGPEMLLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRLQETT 956 Query: 240 LSANQERAAMEKKRLKWKV-AGPPPKENVARGGPVDPSKLVVELAPMEIRTFVIS 79 L ANQ R A RLKW GP P + + +DP+ + +E PMEIRTF+ S Sbjct: 957 LVANQLREA--ASRLKWTTNTGPTPHQTPYQ---LDPANITLE--PMEIRTFLAS 1004
>MA2B1_BOVIN (Q29451) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) [Contains: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase Length = 999 Score = 60.1 bits (144), Expect = 4e-09 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 3/115 (2%) Frame = -1 Query: 414 LPENVALLTLEELEDGSVLLRLAHLYEAGEH--KDLSALASVDLKRVFPDKKVGKIIETS 241 LP +V LLTL ++LLRL H + GE ++LS+ ++DL +F + + ET+ Sbjct: 885 LPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETT 944 Query: 240 LSANQERAAMEKKRLKWKV-AGPPPKENVARGGPVDPSKLVVELAPMEIRTFVIS 79 L+ANQ A RL+W GP P + +R P + L PMEIRTF+ S Sbjct: 945 LAANQLLA--YASRLQWTTDTGPTPHPSPSR-----PVSATITLQPMEIRTFLAS 992
>MA2B1_MOUSE (O09159) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1013 Score = 52.0 bits (123), Expect = 1e-06 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Frame = -1 Query: 543 ARWRRTFGQELYSP-LLLAFAEQDGGNWANSHVSSFSAMDPTYSLPENVALLTLEELEDG 367 AR R QE+ +P ++L+ + + + FS + LP V LLTL Sbjct: 855 ARHRLLAEQEVLAPQVVLSLGGSSPYHSRATPKTQFSGL--RQELPPQVHLLTLARWGPK 912 Query: 366 SVLLRLAHLYEAGEHKD--LSALASVDLKRVFPDKKVGKIIETSLSANQERAAMEKKRLK 193 +LLRL H + E D LS+ +++++ +F + + ET+L+ANQ + RLK Sbjct: 913 MLLLRLEHQFALKEDSDRNLSSPVTLNVQNLFQTFTINYLQETTLAANQPLS--RASRLK 970 Query: 192 WKVAGPPPKENVARGGPVDPSKLVVELAPMEIRTFVIS 79 W P + +DP+ V L PMEIRTF+ S Sbjct: 971 WMTNTGP--TSFPEPSKLDPTS--VTLKPMEIRTFLAS 1004
>MA2B2_MOUSE (O54782) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1018 Score = 48.5 bits (114), Expect = 1e-05 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 7/103 (6%) Frame = -1 Query: 363 VLLRLAHLYEAGEHKDLSALASVDLKRVFPDKKVGKII---ETSLSANQERAAMEKKRLK 193 VLLRL HLYEAGE LS A+VDLK V + +G ++ E SL+ + ++ R Sbjct: 923 VLLRLRHLYEAGEDPVLSRPATVDLKVVL--RGLGSVVAVEERSLTGTWDVQMLQ--RWH 978 Query: 192 WKVAGPPPKENVARGGPVDPSK----LVVELAPMEIRTFVISF 76 W K + +G P P + ++ + P EIRTF I F Sbjct: 979 WST-----KTDHLKGHPTSPPRPPGGSIITVYPKEIRTFFIKF 1016
>MA2B2_PIG (Q28949) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) (AMAN) Length = 995 Score = 43.9 bits (102), Expect = 3e-04 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 4/100 (4%) Frame = -1 Query: 363 VLLRLAHLYEAGEHKDLSALASVDLKRVFPDKKVGKII---ETSLSANQERAAMEKKRLK 193 VLLRL HLYEAGEH+ LS +++L+ V + +G ++ E SL+ + ++ R Sbjct: 898 VLLRLHHLYEAGEHQALSRPVTLNLQSVL--RGLGSVVAVEERSLTGTWDVNSLH--RWS 953 Query: 192 WKVAGPPPKENVARGGPVDPSK-LVVELAPMEIRTFVISF 76 WK +R P+ P + V + P EIRTF I F Sbjct: 954 WKTEDGHHHRGSSR-RPLPPLRGPNVTIHPKEIRTFFIHF 992
>MA2B2_HUMAN (Q9Y2E5) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1009 Score = 42.7 bits (99), Expect = 7e-04 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 3/99 (3%) Frame = -1 Query: 363 VLLRLAHLYEAGEHKDLSALASVDLKRVFPDKKVGKII---ETSLSANQERAAMEKKRLK 193 VLLRL HLYE GE LS +V+L+ V + +G ++ E SL+ + + + R Sbjct: 913 VLLRLYHLYEVGEDPVLSQPVTVNLQAVL--QALGSVVAVEERSLTGTWDLSMLH--RWS 968 Query: 192 WKVAGPPPKENVARGGPVDPSKLVVELAPMEIRTFVISF 76 W+ GP P ++ + P EIRTF I F Sbjct: 969 WR-TGPGRHRGDTTSPSRPPGGPIITVHPKEIRTFFIHF 1006
>MA2B2_PONPY (Q5RDJ3) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1009 Score = 41.2 bits (95), Expect = 0.002 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 7/103 (6%) Frame = -1 Query: 363 VLLRLAHLYEAGEHKDLSALASVDLKRVFPDKKVGKII---ETSLSANQERAAMEKKRLK 193 VLLRL HLYE GE LS +V+L+ V + +G ++ E SL+ + + + R Sbjct: 913 VLLRLHHLYEVGEDPVLSQPVTVNLEAVL--QALGSVVAVEERSLTGTWDVSMLH--RWS 968 Query: 192 WKVAGPPPKENVARGGPVDPSK----LVVELAPMEIRTFVISF 76 W+ RG PS+ ++ + P EIRTF I F Sbjct: 969 WRTG-----SGRRRGDTTSPSRPPGGPIITVHPKEIRTFFIHF 1006
>LEF_BACAN (P15917) Lethal factor precursor (EC 3.4.24.83) (LF) (Anthrax| lethal toxin endopeptidase component) Length = 809 Score = 33.9 bits (76), Expect = 0.32 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 14/99 (14%) Frame = -1 Query: 369 GSVLLRLAHLYEAGEHKDLSALASVDLKRVFPDKKVGKII--------ETSLSAN----- 229 GS L +LYE +L+A DL + K+ + I + S+S+N Sbjct: 461 GSTLYNKIYLYENMNINNLTATLGADLVDSTDNTKINRGIFNEFKKNFKYSISSNYMIVD 520 Query: 228 -QERAAMEKKRLKWKVAGPPPKENVARGGPVDPSKLVVE 115 ER A++ +RLKW++ P R G ++ KL+++ Sbjct: 521 INERPALDNERLKWRIQLSPD----TRAGYLENGKLILQ 555
>PDR1_YEAST (P12383) Transcription factor PDR1 (Pleiotropic drug resistance| protein 1) Length = 1063 Score = 30.8 bits (68), Expect = 2.7 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = +3 Query: 345 EPTEGEHFHLQVPQA*ATRHFQEDCKLDPLQRKMKHVNSPSCLHPAL 485 EP + FHL V Q R FQE + ++MKH NS L+P L Sbjct: 869 EPVQKSGFHLTVSQMLKNRKFQEPLMSNEDNKQMKH-NSGKNLNPDL 914
>NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)| Length = 2498 Score = 30.4 bits (67), Expect = 3.6 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +2 Query: 272 SGNTLLRSTLARAERSLCSPASYR*ANRRRT 364 SG ++LRSTL A +S SP Y N RRT Sbjct: 1510 SGPSVLRSTLHEASKSQLSPGIYEDNNARRT 1540
>KNIR_DROVI (Q24753) Zygotic gap protein knirps| Length = 481 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +2 Query: 11 KCYNVGNHRHGAQIGRVASRWVK---LMTNVRISMGASSTTSLEGSTGPPRATFSFG 172 KCYNVG + G++ GR S W K L+ + A++ + +TG P ++ FG Sbjct: 65 KCYNVGMSKGGSRYGR-RSNWFKIHCLLQEHEQAAAAAAGKAPGHATGSPMSSPGFG 120
>KNIR_DROME (P10734) Zygotic gap protein knirps| Length = 429 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = +2 Query: 11 KCYNVGNHRHGAQIGRVASRWVKLMTNVRISMGASSTTSLEGSTGPPRATFSFGGGPA 184 KCYNVG + G++ GR S W K+ ++ A++ G P S GG P+ Sbjct: 65 KCYNVGMSKGGSRYGR-RSNWFKIHCLLQEHEQAAAAA---GKAPPLAGGVSVGGAPS 118
>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)| Length = 2494 Score = 30.4 bits (67), Expect = 3.6 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +2 Query: 272 SGNTLLRSTLARAERSLCSPASYR*ANRRRT 364 SG ++LRSTL A +S SP Y N RRT Sbjct: 1513 SGPSVLRSTLHEASKSQLSPGVYEDNNARRT 1543
>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 85 kDa subunit) (p85) (TAFII-80) Length = 704 Score = 30.0 bits (66), Expect = 4.6 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 64 ESVGEADDECADLHGRQLNDELGGVHGSSTGHIFFWWRPCHLPFQPLLL 210 +S+ E D E AD++ R L+D G V S GH +R P LLL Sbjct: 418 DSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLL 466
>ERYA3_SACER (Q03133) Erythronolide synthase, modules 5 and 6 (EC 2.3.1.94) (ORF| 3) (6-deoxyerythronolide B synthase III) (DEBS 3) Length = 3171 Score = 29.6 bits (65), Expect = 6.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -1 Query: 480 QDGGNWANSHVSSFSAMDPTYSLPENVALLTLEELEDG 367 + GG + +FSA + LPE VA++ L+ L DG Sbjct: 1701 RQGGLAVDGRCKAFSAEADGFGLPEGVAVVQLQRLSDG 1738
>RAG2_XENLA (Q91830) V(D)J recombination-activating protein 2 (RAG-2)| Length = 520 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/59 (27%), Positives = 24/59 (40%) Frame = -1 Query: 549 DGARWRRTFGQELYSPLLLAFAEQDGGNWANSHVSSFSAMDPTYSLPENVALLTLEELE 373 D W + EL P ++ F +DGG+W +S S Y N+ E +E Sbjct: 419 DRNTWEPFYSTELNKPSMI-FCSKDGGHWVHSQCMDLSETMLKYLSQNNIKYFCNEHVE 476
>KPCD2_HUMAN (Q9BZL6) Serine/threonine-protein kinase D2 (EC 2.7.11.13)| (nPKC-D2) Length = 878 Score = 29.3 bits (64), Expect = 7.9 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Frame = +3 Query: 276 GIPS*GRHSP----ELRDPYALQPRIGEPTEGEHFHLQVPQA*ATRHFQEDCKLDPLQRK 443 G P G P EL+ P L P+I P G FH+Q+ TR F L P + Sbjct: 13 GSPGPGSPPPPGGLELQSPPPLLPQIPAPGSGVSFHIQIG---LTREF----VLLPAASE 65 Query: 444 MKHVNSPSC 470 + HV +C Sbjct: 66 LAHVKQLAC 74 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,440,492 Number of Sequences: 219361 Number of extensions: 1868499 Number of successful extensions: 5785 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 5563 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5772 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
