ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9a08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187407.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 172 bits (87), Expect = 1e-39 Identities = 243/295 (82%) Strand = Plus / Minus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccacc 260 |||||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | Sbjct: 1370 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcgcctccacgccg 1311 Query: 261 gcaagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccag 320 || || || || ||||| | |||||||| |||||| |||| | |||| ||||| | Sbjct: 1310 gcgagcagcgcccgtatctccgggaacagcgggtggtcgtcgacgaggaagtagttgtgg 1251 Query: 321 gccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgc 380 || ||| || |||| || ||||||| |||||| ||||| || || ||||||||||| | | Sbjct: 1250 gcgagcgtcttgaacgcgtcccagccgcagtagcccatgtagacgtgcatgtccatcctc 1191 Query: 381 cccggccgcagcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatg 440 |||||||| |||||||||| || ||||||||||| |||||||| ||||||| |||| Sbjct: 1190 cccggccggagcagcgccgcgtcgaggcgatccttgtagttggtggtgaagacgatgacc 1131 Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgaca 495 | |||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 1130 ctctcctcgccgctcgtcgaccacaagccgtcgatgaagttgagcagcccggaca 1076
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 172 bits (87), Expect = 1e-39 Identities = 243/295 (82%) Strand = Plus / Minus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccacc 260 |||||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | Sbjct: 19910007 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcgcctccacgccg 19909948 Query: 261 gcaagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccag 320 || || || || ||||| | |||||||| |||||| |||| | |||| ||||| | Sbjct: 19909947 gcgagcagcgcccgtatctccgggaacagcgggtggtcgtcgacgaggaagtagttgtgg 19909888 Query: 321 gccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgc 380 || ||| || |||| || ||||||| |||||| ||||| || || ||||||||||| | | Sbjct: 19909887 gcgagcgtcttgaacgcgtcccagccgcagtagcccatgtagacgtgcatgtccatcctc 19909828 Query: 381 cccggccgcagcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatg 440 |||||||| |||||||||| || ||||||||||| |||||||| ||||||| |||| Sbjct: 19909827 cccggccggagcagcgccgcgtcgaggcgatccttgtagttggtggtgaagacgatgacc 19909768 Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgaca 495 | |||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 19909767 ctctcctcgccgctcgtcgaccacaagccgtcgatgaagttgagcagcccggaca 19909713 Score = 157 bits (79), Expect = 6e-35 Identities = 241/295 (81%) Strand = Plus / Minus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccacc 260 |||||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | Sbjct: 19918399 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcgcctccacgccg 19918340 Query: 261 gcaagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccag 320 || || || ||| ||||| | |||||||| |||||| || | | |||| ||||| Sbjct: 19918339 gcgagcagctcccgtatctccgggaacagcgggtggtcgccgacgaggaagtagttgtgt 19918280 Query: 321 gccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgc 380 || ||| || |||| || |||| || |||||| ||||| || | ||||||||||| | | Sbjct: 19918279 gcgagcgtcttgaacgcgtccccgccgcagtagcccatgtagatgtgcatgtccatcctc 19918220 Query: 381 cccggccgcagcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatg 440 |||||||| |||||||||| || ||||||||||| |||||||| ||||| | |||| | Sbjct: 19918219 cccggccggagcagcgccgcgtcgaggcgatccttgtagttggtggtgaacacgatgacg 19918160 Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgaca 495 |||||||||||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct: 19918159 cgctcctcgccgctcgtcgaccacagcccgtcgatgaagttgagcagcccggaca 19918105 Score = 73.8 bits (37), Expect = 7e-10 Identities = 154/193 (79%) Strand = Plus / Minus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccaccg 261 |||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | | Sbjct: 19904515 cggcgtcctcgcagcgaagcagcatctccgacacctcggccggcgtcgcctccacgccgg 19904456 Query: 262 caagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccagg 321 | || || | | ||||| | |||||||| |||||| |||| | |||| ||||| || Sbjct: 19904455 cgagcagctgccgtatctccgggaacagcgggtggtcgtcgacgaggaagtagttgtggg 19904396 Query: 322 ccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgcc 381 | ||| || |||| |||||||||| |||||| ||||| || || ||||||||||| | || Sbjct: 19904395 cgagcgtcttgaacgcctcccagccgcagtagcccatgtagacgtgcatgtccatcctcc 19904336 Query: 382 ccggccgcagcag 394 ||||||| ||||| Sbjct: 19904335 ccggccggagcag 19904323 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 405 aggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccac 464 ||||| ||||| |||||||| ||||| | |||| |||||| |||| | | | ||||||| Sbjct: 19904324 aggcgctccttgtagttggtggtgaacacgatgacgcgctcgtcgctggtcgccgaccac 19904265 Query: 465 aacccgtcgatgaagttgagcagccccgacag 496 | ||||||||||| |||||||||||| ||||| Sbjct: 19904264 agcccgtcgatgaggttgagcagcccggacag 19904233 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Minus Query: 448 cgccgctagtcgaccacaacccgtcgatgaagttgagcag 487 ||||||| | |||||| | ||||||||||||||||||||| Sbjct: 5037218 cgccgctcgccgaccagagcccgtcgatgaagttgagcag 5037179 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Minus Query: 435 atgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagca 486 ||||||||||| |||||| | |||||| | |||||||||||||||||||| Sbjct: 5002779 atgatgcgctcgccgccgcacgccgaccagagcccgtcgatgaagttgagca 5002728 Score = 40.1 bits (20), Expect = 9.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 437 gatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttgag 484 ||||||||| |||||| | |||||| | |||||||||||||||||| Sbjct: 5032128 gatgcgctcgccgccgcacgccgaccagagcccgtcgatgaagttgag 5032081
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 172 bits (87), Expect = 1e-39 Identities = 243/295 (82%) Strand = Plus / Minus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccacc 260 |||||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | Sbjct: 74657 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcgcctccacgccg 74598 Query: 261 gcaagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccag 320 || || || || ||||| | |||||||| |||||| |||| | |||| ||||| | Sbjct: 74597 gcgagcagcgcccgtatctccgggaacagcgggtggtcgtcgacgaggaagtagttgtgg 74538 Query: 321 gccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgc 380 || ||| || |||| || ||||||| |||||| ||||| || || ||||||||||| | | Sbjct: 74537 gcgagcgtcttgaacgcgtcccagccgcagtagcccatgtagacgtgcatgtccatcctc 74478 Query: 381 cccggccgcagcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatg 440 |||||||| |||||||||| || ||||||||||| |||||||| ||||||| |||| Sbjct: 74477 cccggccggagcagcgccgcgtcgaggcgatccttgtagttggtggtgaagacgatgacc 74418 Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgaca 495 | |||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 74417 ctctcctcgccgctcgtcgaccacaagccgtcgatgaagttgagcagcccggaca 74363 Score = 157 bits (79), Expect = 6e-35 Identities = 241/295 (81%) Strand = Plus / Minus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccacc 260 |||||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | Sbjct: 83049 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcgcctccacgccg 82990 Query: 261 gcaagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccag 320 || || || ||| ||||| | |||||||| |||||| || | | |||| ||||| Sbjct: 82989 gcgagcagctcccgtatctccgggaacagcgggtggtcgccgacgaggaagtagttgtgt 82930 Query: 321 gccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgc 380 || ||| || |||| || |||| || |||||| ||||| || | ||||||||||| | | Sbjct: 82929 gcgagcgtcttgaacgcgtccccgccgcagtagcccatgtagatgtgcatgtccatcctc 82870 Query: 381 cccggccgcagcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatg 440 |||||||| |||||||||| || ||||||||||| |||||||| ||||| | |||| | Sbjct: 82869 cccggccggagcagcgccgcgtcgaggcgatccttgtagttggtggtgaacacgatgacg 82810 Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgaca 495 |||||||||||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct: 82809 cgctcctcgccgctcgtcgaccacagcccgtcgatgaagttgagcagcccggaca 82755 Score = 73.8 bits (37), Expect = 7e-10 Identities = 154/193 (79%) Strand = Plus / Minus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccaccg 261 |||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | | Sbjct: 69165 cggcgtcctcgcagcgaagcagcatctccgacacctcggccggcgtcgcctccacgccgg 69106 Query: 262 caagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccagg 321 | || || | | ||||| | |||||||| |||||| |||| | |||| ||||| || Sbjct: 69105 cgagcagctgccgtatctccgggaacagcgggtggtcgtcgacgaggaagtagttgtggg 69046 Query: 322 ccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgcc 381 | ||| || |||| |||||||||| |||||| ||||| || || ||||||||||| | || Sbjct: 69045 cgagcgtcttgaacgcctcccagccgcagtagcccatgtagacgtgcatgtccatcctcc 68986 Query: 382 ccggccgcagcag 394 ||||||| ||||| Sbjct: 68985 ccggccggagcag 68973 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 405 aggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccac 464 ||||| ||||| |||||||| ||||| | |||| |||||| |||| | | | ||||||| Sbjct: 68974 aggcgctccttgtagttggtggtgaacacgatgacgcgctcgtcgctggtcgccgaccac 68915 Query: 465 aacccgtcgatgaagttgagcagccccgacag 496 | ||||||||||| |||||||||||| ||||| Sbjct: 68914 agcccgtcgatgaggttgagcagcccggacag 68883
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 170 bits (86), Expect = 4e-39 Identities = 146/166 (87%) Strand = Plus / Plus Query: 331 tgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgccccggccgca 390 |||| |||||||||| |||||| ||||| || || ||||||||||| ||||||||||| | Sbjct: 46231 tgaacgcctcccagccgcagtagcccatgtagacgtgcatgtccatccgccccggccgga 46290 Query: 391 gcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgc 450 ||||||||||||| ||||| ||||| ||||| || ||||||| |||| ||||||||||| Sbjct: 46291 gcagcgccggatcgaggcgctccttgtagtttgtggtgaagacgatgacgcgctcctcgc 46350 Query: 451 cgctagtcgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||| || ||||||| |||||||||||||||||||||||| ||||| Sbjct: 46351 cgctcgtggaccacagcccgtcgatgaagttgagcagcccggacag 46396 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccac 256 |||||||||||||| || ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 46101 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcacctccac 46156
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 170 bits (86), Expect = 4e-39 Identities = 146/166 (87%) Strand = Plus / Plus Query: 331 tgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgccccggccgca 390 |||| |||||||||| |||||| ||||| || || ||||||||||| ||||||||||| | Sbjct: 21353320 tgaacgcctcccagccgcagtagcccatgtagacgtgcatgtccatccgccccggccgga 21353379 Query: 391 gcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgc 450 ||||||||||||| ||||| ||||| ||||| || ||||||| |||| ||||||||||| Sbjct: 21353380 gcagcgccggatcgaggcgctccttgtagtttgtggtgaagacgatgacgcgctcctcgc 21353439 Query: 451 cgctagtcgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||| || ||||||| |||||||||||||||||||||||| ||||| Sbjct: 21353440 cgctcgtggaccacagcccgtcgatgaagttgagcagcccggacag 21353485 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccac 256 |||||||||||||| || ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 21353190 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcacctccac 21353245 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||| ||||||||||||||| |||||||| ||||| Sbjct: 33185248 cgaccacagcccgtcgatgaagtttagcagcccggacag 33185210 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cccgtcgtcctcgtcctccaa 554 ||||||||||||||||||||| Sbjct: 15156292 cccgtcgtcctcgtcctccaa 15156312
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 170 bits (86), Expect = 4e-39 Identities = 146/166 (87%) Strand = Plus / Plus Query: 331 tgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgccccggccgca 390 |||| |||||||||| |||||| ||||| || || ||||||||||| ||||||||||| | Sbjct: 21346349 tgaacgcctcccagccgcagtagcccatgtagacgtgcatgtccatccgccccggccgga 21346408 Query: 391 gcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgc 450 ||||||||||||| ||||| ||||| ||||| || ||||||| |||| ||||||||||| Sbjct: 21346409 gcagcgccggatcgaggcgctccttgtagtttgtggtgaagacgatgacgcgctcctcgc 21346468 Query: 451 cgctagtcgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||| || ||||||| |||||||||||||||||||||||| ||||| Sbjct: 21346469 cgctcgtggaccacagcccgtcgatgaagttgagcagcccggacag 21346514 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccac 256 |||||||||||||| || ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 21346219 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcacctccac 21346274 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||| ||||||||||||||| |||||||| ||||| Sbjct: 33275758 cgaccacagcccgtcgatgaagtttagcagcccggacag 33275720 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cccgtcgtcctcgtcctccaa 554 ||||||||||||||||||||| Sbjct: 15150826 cccgtcgtcctcgtcctccaa 15150846
>dbj|AK101987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079B04, full insert sequence Length = 1408 Score = 170 bits (86), Expect = 4e-39 Identities = 146/166 (87%) Strand = Plus / Minus Query: 331 tgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgccccggccgca 390 |||| |||||||||| |||||| ||||| || || ||||||||||| ||||||||||| | Sbjct: 772 tgaacgcctcccagccgcagtagcccatgtagacgtgcatgtccatccgccccggccgga 713 Query: 391 gcagcgccggatcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgc 450 ||||||||||||| ||||| ||||| ||||| || ||||||| |||| ||||||||||| Sbjct: 712 gcagcgccggatcgaggcgctccttgtagtttgtggtgaagacgatgacgcgctcctcgc 653 Query: 451 cgctagtcgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||| || ||||||| |||||||||||||||||||||||| ||||| Sbjct: 652 cgctcgtggaccacagcccgtcgatgaagttgagcagcccggacag 607 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 201 tcggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccac 256 |||||||||||||| || ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 902 tcggcgtcctcgctgcgcagcagcatctccgacacctcggccggcgtcacctccac 847
>ref|NM_196128.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.19), mRNA Length = 747 Score = 133 bits (67), Expect = 8e-28 Identities = 178/215 (82%) Strand = Plus / Minus Query: 282 gggaacagagggtggccgtcaatgaggtgatagttccaggccagcttcctgaatgcctcc 341 |||||||| |||||| |||| | |||| ||||| | ||| ||| || |||| || ||| Sbjct: 596 gggaacagcgggtggtcgtcgacgaggaagtagttgcgggcgagcgtcgtgaaggcgtcc 537 Query: 342 cagcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccgga 401 |||| ||||| ||||| || || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 536 cagccgcagtggcccatgtagacgtgcttgtccatccgccccggccggagcagcgccggg 477 Query: 402 tcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgac 461 || ||||| ||| | |||||||| ||||||| |||| | |||||||||||| |||||| Sbjct: 476 tcgaggcgctccctgtagttggtggtgaagacgatgaccctctcctcgccgctcgtcgac 417 Query: 462 cacaacccgtcgatgaagttgagcagccccgacag 496 |||| |||||||||||||||||||||||| ||||| Sbjct: 416 cacagcccgtcgatgaagttgagcagcccggacag 382 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctc 253 ||||||||||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct: 676 cggcgtcctcgctgcgcagcagcatctcggacacctccgccggcgtcacctc 625
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 133 bits (67), Expect = 8e-28 Identities = 178/215 (82%) Strand = Plus / Minus Query: 282 gggaacagagggtggccgtcaatgaggtgatagttccaggccagcttcctgaatgcctcc 341 |||||||| |||||| |||| | |||| ||||| | ||| ||| || |||| || ||| Sbjct: 85240 gggaacagcgggtggtcgtcgacgaggaagtagttgcgggcgagcgtcgtgaaggcgtcc 85181 Query: 342 cagcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccgga 401 |||| ||||| ||||| || || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 85180 cagccgcagtggcccatgtagacgtgcttgtccatccgccccggccggagcagcgccggg 85121 Query: 402 tcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgac 461 || ||||| ||| | |||||||| ||||||| |||| | |||||||||||| |||||| Sbjct: 85120 tcgaggcgctccctgtagttggtggtgaagacgatgaccctctcctcgccgctcgtcgac 85061 Query: 462 cacaacccgtcgatgaagttgagcagccccgacag 496 |||| |||||||||||||||||||||||| ||||| Sbjct: 85060 cacagcccgtcgatgaagttgagcagcccggacag 85026 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctc 253 ||||||||||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct: 85320 cggcgtcctcgctgcgcagcagcatctcggacacctccgccggcgtcacctc 85269
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 133 bits (67), Expect = 8e-28 Identities = 178/215 (82%) Strand = Plus / Plus Query: 282 gggaacagagggtggccgtcaatgaggtgatagttccaggccagcttcctgaatgcctcc 341 |||||||| |||||| |||| | |||| ||||| | ||| ||| || |||| || ||| Sbjct: 89203 gggaacagcgggtggtcgtcgacgaggaagtagttgcgggcgagcgtcgtgaaggcgtcc 89262 Query: 342 cagcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccgga 401 |||| ||||| ||||| || || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 89263 cagccgcagtggcccatgtagacgtgcttgtccatccgccccggccggagcagcgccggg 89322 Query: 402 tcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgac 461 || ||||| ||| | |||||||| ||||||| |||| | |||||||||||| |||||| Sbjct: 89323 tcgaggcgctccctgtagttggtggtgaagacgatgaccctctcctcgccgctcgtcgac 89382 Query: 462 cacaacccgtcgatgaagttgagcagccccgacag 496 |||| |||||||||||||||||||||||| ||||| Sbjct: 89383 cacagcccgtcgatgaagttgagcagcccggacag 89417 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctc 253 ||||||||||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct: 89123 cggcgtcctcgctgcgcagcagcatctcggacacctccgccggcgtcacctc 89174
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 133 bits (67), Expect = 8e-28 Identities = 178/215 (82%) Strand = Plus / Minus Query: 282 gggaacagagggtggccgtcaatgaggtgatagttccaggccagcttcctgaatgcctcc 341 |||||||| |||||| |||| | |||| ||||| | ||| ||| || |||| || ||| Sbjct: 11277252 gggaacagcgggtggtcgtcgacgaggaagtagttgcgggcgagcgtcgtgaaggcgtcc 11277193 Query: 342 cagcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccgga 401 |||| ||||| ||||| || || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 11277192 cagccgcagtggcccatgtagacgtgcttgtccatccgccccggccggagcagcgccggg 11277133 Query: 402 tcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgac 461 || ||||| ||| | |||||||| ||||||| |||| | |||||||||||| |||||| Sbjct: 11277132 tcgaggcgctccctgtagttggtggtgaagacgatgaccctctcctcgccgctcgtcgac 11277073 Query: 462 cacaacccgtcgatgaagttgagcagccccgacag 496 |||| |||||||||||||||||||||||| ||||| Sbjct: 11277072 cacagcccgtcgatgaagttgagcagcccggacag 11277038 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctc 253 ||||||||||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct: 11277332 cggcgtcctcgctgcgcagcagcatctcggacacctccgccggcgtcacctc 11277281
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 133 bits (67), Expect = 8e-28 Identities = 178/215 (82%) Strand = Plus / Minus Query: 282 gggaacagagggtggccgtcaatgaggtgatagttccaggccagcttcctgaatgcctcc 341 |||||||| |||||| |||| | |||| ||||| | ||| ||| || |||| || ||| Sbjct: 11283692 gggaacagcgggtggtcgtcgacgaggaagtagttgcgggcgagcgtcgtgaaggcgtcc 11283633 Query: 342 cagcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccgga 401 |||| ||||| ||||| || || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 11283632 cagccgcagtggcccatgtagacgtgcttgtccatccgccccggccggagcagcgccggg 11283573 Query: 402 tcaaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgac 461 || ||||| ||| | |||||||| ||||||| |||| | |||||||||||| |||||| Sbjct: 11283572 tcgaggcgctccctgtagttggtggtgaagacgatgaccctctcctcgccgctcgtcgac 11283513 Query: 462 cacaacccgtcgatgaagttgagcagccccgacag 496 |||| |||||||||||||||||||||||| ||||| Sbjct: 11283512 cacagcccgtcgatgaagttgagcagcccggacag 11283478 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctc 253 ||||||||||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct: 11283772 cggcgtcctcgctgcgcagcagcatctcggacacctccgccggcgtcacctc 11283721
>ref|NM_192509.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 611 cgctcctcgccgctcgtcgaccacagcccgtcgatgaagttgagcagcccggacag 556 Score = 73.8 bits (37), Expect = 7e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 364 catgcatgtccatgcgccccggccgcagcagcgccggatcaaggcgatccttatagttgg 423 ||||||||||||| ||||||||||| |||||||||| || ||||| ||||| ||||||| Sbjct: 695 catgcatgtccatccgccccggccggagcagcgccgcgtcgaggcgttccttgtagttgg 636 Query: 424 tcgtgaaga 432 | ||||||| Sbjct: 635 tggtgaaga 627 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 219 agcagcatctcagacacctcggcgggcgt 247 ||||||||||| ||||||||||| ||||| Sbjct: 742 agcagcatctccgacacctcggccggcgt 714
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 22637647 cgctcctcgccgctcgtcgaccacagcccgtcgatgaagttgagcagcccggacag 22637702 Score = 73.8 bits (37), Expect = 7e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 364 catgcatgtccatgcgccccggccgcagcagcgccggatcaaggcgatccttatagttgg 423 ||||||||||||| ||||||||||| |||||||||| || ||||| ||||| ||||||| Sbjct: 22637563 catgcatgtccatccgccccggccggagcagcgccgcgtcgaggcgttccttgtagttgg 22637622 Query: 424 tcgtgaaga 432 | ||||||| Sbjct: 22637623 tggtgaaga 22637631 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 344 gcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccggatc 403 ||||||||||||||||| |||||||||||||| | || || ||||| ||||| || || Sbjct: 23836362 gcagcagtaacccatatggacatgcatgtccatcctgccaggacgcagaagcgcagggtc 23836303 Query: 404 aaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgacca 463 || | ||||| ||||| |||||||||| || || | |||||| || || || ||||| Sbjct: 23836302 gagcctctccttgtagtttgtcgtgaagacaattattctctcctccccacttgttgacca 23836243 Query: 464 caacccgtcgatgaagttgagcagccccgacagtgtta 501 | ||| || | ||||||||| ||||| || ||||||| Sbjct: 23836242 aagcccatccacgaagttgagtagcccagatagtgtta 23836205 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 10891169 cgaccagagcccgtcgatgaagttgagcaggccggacag 10891131 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 agcagcatctcagacacctcggcgggcgt 247 ||||||||||| ||||||||||| ||||| Sbjct: 22637516 agcagcatctccgacacctcggccggcgt 22637544
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 441 cgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 14359 cgctcctcgccgctcgtcgaccacagcccgtcgatgaagttgagcagcccggacag 14414 Score = 73.8 bits (37), Expect = 7e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 364 catgcatgtccatgcgccccggccgcagcagcgccggatcaaggcgatccttatagttgg 423 ||||||||||||| ||||||||||| |||||||||| || ||||| ||||| ||||||| Sbjct: 14275 catgcatgtccatccgccccggccggagcagcgccgcgtcgaggcgttccttgtagttgg 14334 Query: 424 tcgtgaaga 432 | ||||||| Sbjct: 14335 tggtgaaga 14343 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 agcagcatctcagacacctcggcgggcgt 247 ||||||||||| ||||||||||| ||||| Sbjct: 14228 agcagcatctccgacacctcggccggcgt 14256
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 7e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| ||||| |||||| | |||||||| ||| |||||||| Sbjct: 27459623 gttggtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccatcgatgaa 27459564 Query: 479 gttgagcagccccgacag 496 |||||||||||||||||| Sbjct: 27459563 gttgagcagccccgacag 27459546 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 423 gtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttg 482 ||||||||||| ||||| ||||| |||||| | |||||||| |||||||||||||||| Sbjct: 13924639 gtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccgtcgatgaagttg 13924580 Query: 483 agcagccccgacag 496 |||||||||||||| Sbjct: 13924579 agcagccccgacag 13924566 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacagtgt 499 |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 16915431 cgaccacagcccgtcgatgaagttgagcagccctgacagtgt 16915472 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| | ||| |||||| | |||||||| |||||||||||| Sbjct: 27449327 gttggtcgtgaagatgatgatcctctcgccgccgcacgccgaccacagcccgtcgatgaa 27449386 Query: 479 gttgagcag 487 ||||||||| Sbjct: 27449387 gttgagcag 27449395 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 459 gaccacaacccgtcgatgaagttgagcagccccgacagtgttat 502 ||||||| ||| || || |||||||||||||||||||| ||||| Sbjct: 16857667 gaccacagcccatcaataaagttgagcagccccgacagcgttat 16857624
>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 55237 Score = 83.8 bits (42), Expect = 7e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| ||||| |||||| | |||||||| ||| |||||||| Sbjct: 22195 gttggtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccatcgatgaa 22254 Query: 479 gttgagcagccccgacag 496 |||||||||||||||||| Sbjct: 22255 gttgagcagccccgacag 22272 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| | ||| |||||| | |||||||| |||||||||||| Sbjct: 32491 gttggtcgtgaagatgatgatcctctcgccgccgcacgccgaccacagcccgtcgatgaa 32432 Query: 479 gttgagcag 487 ||||||||| Sbjct: 32431 gttgagcag 32423
>dbj|AK110532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-A05, full insert sequence Length = 1500 Score = 83.8 bits (42), Expect = 7e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| ||||| |||||| | |||||||| ||| |||||||| Sbjct: 992 gttggtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccatcgatgaa 933 Query: 479 gttgagcagccccgacag 496 |||||||||||||||||| Sbjct: 932 gttgagcagccccgacag 915
>dbj|AK063710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B10, full insert sequence Length = 1620 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 423 gtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttg 482 ||||||||||| ||||| ||||| |||||| | |||||||| |||||||||||||||| Sbjct: 961 gtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccgtcgatgaagttg 902 Query: 483 agcagccccgacag 496 |||||||||||||| Sbjct: 901 agcagccccgacag 888
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 7e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| ||||| |||||| | |||||||| ||| |||||||| Sbjct: 27385223 gttggtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccatcgatgaa 27385164 Query: 479 gttgagcagccccgacag 496 |||||||||||||||||| Sbjct: 27385163 gttgagcagccccgacag 27385146 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 423 gtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttg 482 ||||||||||| ||||| ||||| |||||| | |||||||| |||||||||||||||| Sbjct: 13878919 gtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccgtcgatgaagttg 13878860 Query: 483 agcagccccgacag 496 |||||||||||||| Sbjct: 13878859 agcagccccgacag 13878846 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacagtgt 499 |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 16868664 cgaccacagcccgtcgatgaagttgagcagccctgacagtgt 16868705 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| | ||| |||||| | |||||||| |||||||||||| Sbjct: 27374927 gttggtcgtgaagatgatgatcctctcgccgccgcacgccgaccacagcccgtcgatgaa 27374986 Query: 479 gttgagcag 487 ||||||||| Sbjct: 27374987 gttgagcag 27374995 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 459 gaccacaacccgtcgatgaagttgagcagccccgacagtgttat 502 ||||||| ||| || || |||||||||||||||||||| ||||| Sbjct: 16810900 gaccacagcccatcaataaagttgagcagccccgacagcgttat 16810857
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 83.8 bits (42), Expect = 7e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| ||||| |||||| | |||||||| ||| |||||||| Sbjct: 35537 gttggtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccatcgatgaa 35478 Query: 479 gttgagcagccccgacag 496 |||||||||||||||||| Sbjct: 35477 gttgagcagccccgacag 35460 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| | ||| |||||| | |||||||| |||||||||||| Sbjct: 25241 gttggtcgtgaagatgatgatcctctcgccgccgcacgccgaccacagcccgtcgatgaa 25300 Query: 479 gttgagcag 487 ||||||||| Sbjct: 25301 gttgagcag 25309
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144552 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 423 gtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttg 482 ||||||||||| ||||| ||||| |||||| | |||||||| |||||||||||||||| Sbjct: 61267 gtcgtgaagatgatgatccgctcgccgccgcacgccgaccacagcccgtcgatgaagttg 61208 Query: 483 agcagccccgacag 496 |||||||||||||| Sbjct: 61207 agcagccccgacag 61194
>ref|NM_187406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 73.8 bits (37), Expect = 7e-10 Identities = 154/193 (79%) Strand = Plus / Minus Query: 202 cggcgtcctcgctccgtagcagcatctcagacacctcggcgggcgttacctccaccaccg 261 |||||||||||| || ||||||||||| ||||||||||| ||||| ||||||| | | Sbjct: 862 cggcgtcctcgcagcgaagcagcatctccgacacctcggccggcgtcgcctccacgccgg 803 Query: 262 caagtagttcctgtatccctgggaacagagggtggccgtcaatgaggtgatagttccagg 321 | || || | | ||||| | |||||||| |||||| |||| | |||| ||||| || Sbjct: 802 cgagcagctgccgtatctccgggaacagcgggtggtcgtcgacgaggaagtagttgtggg 743 Query: 322 ccagcttcctgaatgcctcccagcagcagtaacccatatatacatgcatgtccatgcgcc 381 | ||| || |||| |||||||||| |||||| ||||| || || ||||||||||| | || Sbjct: 742 cgagcgtcttgaacgcctcccagccgcagtagcccatgtagacgtgcatgtccatcctcc 683 Query: 382 ccggccgcagcag 394 ||||||| ||||| Sbjct: 682 ccggccggagcag 670 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 405 aggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccac 464 ||||| ||||| |||||||| ||||| | |||| |||||| |||| | | | ||||||| Sbjct: 671 aggcgctccttgtagttggtggtgaacacgatgacgcgctcgtcgctggtcgccgaccac 612 Query: 465 aacccgtcgatgaagttgagcagccccgacag 496 | ||||||||||| |||||||||||| ||||| Sbjct: 611 agcccgtcgatgaggttgagcagcccggacag 580
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 411 tccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccg 470 ||||||| |||||| |||||||| ||||| ||||| ||||||| | |||||| | |||| Sbjct: 14775 tccttatggttggtggtgaagatgatgatccgctcaccgccgcttgccgaccatagcccg 14834 Query: 471 tcgatgaagttgag 484 |||||||||||||| Sbjct: 14835 tcgatgaagttgag 14848 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 420 ttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaag 479 |||||||||||||| || || ||||| | |||| |||||||||| ||||||||||||| Sbjct: 12487 ttggtcgtgaagatgataatccgctcacccccgcaggtcgaccacagcccgtcgatgaag 12546 Query: 480 ttgagcag 487 |||||||| Sbjct: 12547 ttgagcag 12554
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 411 tccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccg 470 ||||||| |||||| |||||||| ||||| ||||| ||||||| | |||||| | |||| Sbjct: 17504 tccttatggttggtggtgaagatgatgatccgctcaccgccgcttgccgaccatagcccg 17563 Query: 471 tcgatgaagttgag 484 |||||||||||||| Sbjct: 17564 tcgatgaagttgag 17577 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 420 ttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaag 479 |||||||||||||| || || ||||| | |||| | |||||||| ||||||||||||| Sbjct: 15205 ttggtcgtgaagatgataatccgctcacccccgcaggccgaccacagcccgtcgatgaag 15264 Query: 480 ttgagcag 487 |||||||| Sbjct: 15265 ttgagcag 15272
>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150238 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacagtgt 499 |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 37474 cgaccacagcccgtcgatgaagttgagcagccctgacagtgt 37515
>dbj|AK122160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147F11, full insert sequence Length = 1915 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| | ||| |||||| | |||||||| |||||||||||| Sbjct: 1127 gttggtcgtgaagatgatgatcctctcgccgccgcacgccgaccacagcccgtcgatgaa 1068 Query: 479 gttgagcag 487 ||||||||| Sbjct: 1067 gttgagcag 1059
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 ||||||||||||||| ||||| | ||| |||||| | |||||||| |||||||||||| Sbjct: 117647 gttggtcgtgaagatgatgatcctctcgccgccgcacgccgaccacagcccgtcgatgaa 117706 Query: 479 gttgagcag 487 ||||||||| Sbjct: 117707 gttgagcag 117715
>gb|AY107953.1| Zea mays PCO122089 mRNA sequence Length = 643 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||| ||||||||||||||||||||| |||||||| Sbjct: 141 cgaccacagcccgtcgatgaagttgagcaggcccgacag 103
>emb|CR626932.1| Triticum turgidum Length = 19229 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 |||||| |||||||| ||||| ||||| ||||||| | |||||| | |||||||||||| Sbjct: 5400 gttggtggtgaagatgatgatccgctcaccgccgcttgccgaccatagcccgtcgatgaa 5341 Query: 479 gttgag 484 |||||| Sbjct: 5340 gttgag 5335 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 458 cgaccacaacccgtcgatgaagttgagcag 487 |||||||| ||||||||||||||||||||| Sbjct: 12490 cgaccacagcccgtcgatgaagttgagcag 12519 Score = 46.1 bits (23), Expect = 0.15 Identities = 62/75 (82%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 |||||| |||||||| ||||| ||||| | |||| || ||||| | |||||||||||| Sbjct: 18120 gttggtggtgaagatgatgatccgctcacccccgcaagcagaccatagcccgtcgatgaa 18179 Query: 479 gttgagcagccccga 493 |||||| || ||||| Sbjct: 18180 gttgaggaggcccga 18194 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 |||||| |||||||| ||||| |||| ||||||| | ||||| | |||||||||||| Sbjct: 14783 gttggtggtgaagatgatgatctgctcaccgccgcttgctgaccatagcccgtcgatgaa 14842 Query: 479 gttgag 484 |||||| Sbjct: 14843 gttgag 14848
>emb|CR626930.1| Triticum aestivum Length = 19274 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 |||||| |||||||| ||||| ||||| ||||||| | |||||| | |||||||||||| Sbjct: 5400 gttggtggtgaagatgatgatccgctcaccgccgcttgccgaccatagcccgtcgatgaa 5341 Query: 479 gttgag 484 |||||| Sbjct: 5340 gttgag 5335 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 458 cgaccacaacccgtcgatgaagttgagcag 487 |||||||| ||||||||||||||||||||| Sbjct: 12488 cgaccacagcccgtcgatgaagttgagcag 12517 Score = 46.1 bits (23), Expect = 0.15 Identities = 62/75 (82%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 |||||| |||||||| ||||| ||||| | |||| || ||||| | |||||||||||| Sbjct: 18165 gttggtggtgaagatgatgatccgctcacccccgcaagcagaccatagcccgtcgatgaa 18224 Query: 479 gttgagcagccccga 493 |||||| || ||||| Sbjct: 18225 gttgaggaggcccga 18239 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Plus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 |||||| |||||||| ||||| |||| ||||||| | ||||| | |||||||||||| Sbjct: 14812 gttggtggtgaagatgatgatctgctcaccgccgcttgctgaccatagcccgtcgatgaa 14871 Query: 479 gttgag 484 |||||| Sbjct: 14872 gttgag 14877
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 435 atgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgac 494 ||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| Sbjct: 16568478 atgatgcgctcctcgccgcagcacgaccacaggccgtcggtgaagttgagcagcccggac 16568419 Query: 495 ag 496 || Sbjct: 16568418 ag 16568417
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 435 atgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcagccccgac 494 ||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| Sbjct: 100703 atgatgcgctcctcgccgcagcacgaccacaggccgtcggtgaagttgagcagcccggac 100644 Query: 495 ag 496 || Sbjct: 100643 ag 100642
>ref|XM_469983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||| ||||||||||||||| |||||||| ||||| Sbjct: 1215 cgaccacagcccgtcgatgaagtttagcagcccggacag 1177
>ref|NM_192679.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1461 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 344 gcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccggatc 403 ||||||||||||||||| |||||||||||||| | || || ||||| ||||| || || Sbjct: 1149 gcagcagtaacccatatggacatgcatgtccatcctgccaggacgcagaagcgcagggtc 1090 Query: 404 aaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgacca 463 || | ||||| ||||| |||||||||| || || | |||||| || || || ||||| Sbjct: 1089 gagcctctccttgtagtttgtcgtgaagacaattattctctcctccccacttgttgacca 1030 Query: 464 caacccgtcgatgaagttgagcagccccgacagtgttatcttg 506 | ||| || | ||||||||| ||||| || ||||||| |||| Sbjct: 1029 aagcccatccacgaagttgagtagcccagatagtgttaccttg 987
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||||| ||||||||||||||| |||||||| ||||| Sbjct: 59307 cgaccacagcccgtcgatgaagtttagcagcccggacag 59345
>dbj|AK120157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030D19, full insert sequence Length = 1665 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 344 gcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccggatc 403 ||||||||||||||||| |||||||||||||| | || || ||||| ||||| || || Sbjct: 1191 gcagcagtaacccatatggacatgcatgtccatcctgccaggacgcagaagcgcagggtc 1132 Query: 404 aaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgacca 463 || | ||||| ||||| |||||||||| || || | |||||| || || || ||||| Sbjct: 1131 gagcctctccttgtagtttgtcgtgaagacaattattctctcctccccacttgttgacca 1072 Query: 464 caacccgtcgatgaagttgagcagccccgacagtgttatcttg 506 | ||| || | ||||||||| ||||| || ||||||| |||| Sbjct: 1071 aagcccatccacgaagttgagtagcccagatagtgttaccttg 1029
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 411 tccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccg 470 ||||||| |||||| |||||||| | ||| ||||| ||||||| | ||||| | |||| Sbjct: 70551 tccttatggttggtggtgaagatgaagatccgctcaccgccgcttgctgaccatagcccg 70492 Query: 471 tcgatgaagttgag 484 |||||||||||||| Sbjct: 70491 tcgatgaagttgag 70478 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ccgtcgatgaagttgagcag 487 |||||||||||||||||||| Sbjct: 88037 ccgtcgatgaagttgagcag 88056
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 344 gcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccggatc 403 ||||||||||||||||| |||||||||||||| | || || ||||| ||||| || || Sbjct: 116947 gcagcagtaacccatatggacatgcatgtccatcctgccaggacgcagaagcgcagggtc 116888 Query: 404 aaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgacca 463 || | ||||| ||||| |||||||||| || || | |||||| || || || ||||| Sbjct: 116887 gagcctctccttgtagtttgtcgtgaagacaattattctctcctccccacttgttgacca 116828 Query: 464 caacccgtcgatgaagttgagcagccccgacagtgtta 501 | ||| || | ||||||||| ||||| || ||||||| Sbjct: 116827 aagcccatccacgaagttgagtagcccagatagtgtta 116790
>dbj|AK110890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-H07, full insert sequence Length = 1680 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 344 gcagcagtaacccatatatacatgcatgtccatgcgccccggccgcagcagcgccggatc 403 ||||||||||||||||| |||||||||||||| | || || ||||| ||||| || || Sbjct: 548 gcagcagtaacccatatggacatgcatgtccatcctgccaggacgcagaagcgcagggtc 607 Query: 404 aaggcgatccttatagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgacca 463 || | ||||| ||||| |||||||||| || || | |||||| || || || ||||| Sbjct: 608 gagcctctccttgtagtttgtcgtgaagacaattattctctcctccccacttgttgacca 667 Query: 464 caacccgtcgatgaagttgagcagccccgacagtgtta 501 | ||| || | ||||||||| ||||| || ||||||| Sbjct: 668 aagcccatccacgaagttgagtagcccagatagtgtta 705
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 537 gtcgtcctcgtcctccaaggagtgg 561 ||||||||||||||||||||||||| Sbjct: 127 gtcgtcctcgtcctccaaggagtgg 103
>gb|AC098869.3| Homo sapiens BAC clone RP11-588L15 from 4, complete sequence Length = 188295 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 315 ttccaggccagcttcctgaatgcc 338 |||||||||||||||||||||||| Sbjct: 185897 ttccaggccagcttcctgaatgcc 185920
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Minus Query: 448 cgccgctagtcgaccacaacccgtcgatgaagttgagcag 487 ||||||| | |||||| | ||||||||||||||||||||| Sbjct: 78907 cgccgctcgccgaccagagcccgtcgatgaagttgagcag 78868 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Minus Query: 435 atgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagca 486 ||||||||||| |||||| | |||||| | |||||||||||||||||||| Sbjct: 44468 atgatgcgctcgccgccgcacgccgaccagagcccgtcgatgaagttgagca 44417 Score = 40.1 bits (20), Expect = 9.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 437 gatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttgag 484 ||||||||| |||||| | |||||| | |||||||||||||||||| Sbjct: 73817 gatgcgctcgccgccgcacgccgaccagagcccgtcgatgaagttgag 73770
>dbj|AK109791.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D09, full insert sequence Length = 1855 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Minus Query: 448 cgccgctagtcgaccacaacccgtcgatgaagttgagcag 487 ||||||| | |||||| | ||||||||||||||||||||| Sbjct: 1195 cgccgctcgccgaccagagcccgtcgatgaagttgagcag 1156
>dbj|AK065505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N01, full insert sequence Length = 1739 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Minus Query: 435 atgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaagttgagca 486 ||||||||||| |||||| | |||||| | |||||||||||||||||||| Sbjct: 1221 atgatgcgctcgccgccgcacgccgaccagagcccgtcgatgaagttgagca 1170
>emb|AL831804.5|CNS08CAH Oryza sativa chromosome 12, . BAC OSJNBb0027C15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115632 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 459 gaccacaacccgtcgatgaagttgagcagccccgacagtgttat 502 ||||||| ||| || || |||||||||||||||||||| ||||| Sbjct: 69549 gaccacagcccatcaataaagttgagcagccccgacagcgttat 69506
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 46.1 bits (23), Expect = 0.15 Identities = 62/75 (82%) Strand = Plus / Minus Query: 419 gttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatgaa 478 |||||| |||||||| ||||| ||||| | |||| || ||||| | |||||||||||| Sbjct: 23847 gttggtggtgaagatgatgatccgctcacctccgcaagcagaccatagcccgtcgatgaa 23788 Query: 479 gttgagcagccccga 493 |||||| || ||||| Sbjct: 23787 gttgaggaggcccga 23773
>ref|XM_475995.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 417 tagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatg 476 ||||| || ||||||| ||||| | |||||||||||| || ||||||| ||||||| Sbjct: 1103 tagtttgttgtgaagacgatgatcctctcctcgccgctggttgaccacagaccgtcgaca 1044 Query: 477 aagttgagcag 487 ||||||||||| Sbjct: 1043 aagttgagcag 1033
>ref|NM_183658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1584 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 1134 cgaccagagcccgtcgatgaagttgagcaggccggacag 1096
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 417 tagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatg 476 ||||| || ||||||| ||||| | |||||||||||| || ||||||| ||||||| Sbjct: 35421 tagtttgttgtgaagacgatgatcctctcctcgccgctggttgaccacagaccgtcgaca 35480 Query: 477 aagttgagcag 487 ||||||||||| Sbjct: 35481 aagttgagcag 35491
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 417 tagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatg 476 ||||| || ||||||| ||||| | |||||||||||| || ||||||| ||||||| Sbjct: 29109197 tagtttgttgtgaagacgatgatcctctcctcgccgctggttgaccacagaccgtcgaca 29109256 Query: 477 aagttgagcag 487 ||||||||||| Sbjct: 29109257 aagttgagcag 29109267
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 78185 cgaccagagcccgtcgatgaagttgagcaggccggacag 78147
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 cgccccggccgcagcagcgccgg 400 ||||||||||||||||||||||| Sbjct: 5591268 cgccccggccgcagcagcgccgg 5591246
>dbj|AK109883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D07, full insert sequence Length = 1801 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 458 cgaccacaacccgtcgatgaagttgagcagccccgacag 496 |||||| | ||||||||||||||||||||| || ||||| Sbjct: 1210 cgaccagagcccgtcgatgaagttgagcaggccggacag 1172
>dbj|AK073047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009G15, full insert sequence Length = 2835 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 417 tagttggtcgtgaagatcatgatgcgctcctcgccgctagtcgaccacaacccgtcgatg 476 ||||| || ||||||| ||||| | |||||||||||| || ||||||| ||||||| Sbjct: 622 tagtttgttgtgaagacgatgatcctctcctcgccgctggttgaccacagaccgtcgaca 681 Query: 477 aagttgagcag 487 ||||||||||| Sbjct: 682 aagttgagcag 692
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 381 cccggccgcagcagcgccggatcaag 406 ||||| |||||||||||||||||||| Sbjct: 1024853 cccggacgcagcagcgccggatcaag 1024828
>dbj|AK016348.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930584E12 product:unclassifiable, full insert sequence Length = 983 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 tctgaacacacagaccatgtct 99 |||||||||||||||||||||| Sbjct: 910 tctgaacacacagaccatgtct 889
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 tctgaacacacagaccatgtct 99 |||||||||||||||||||||| Sbjct: 199852 tctgaacacacagaccatgtct 199831
>ref|XM_515075.1| PREDICTED: Pan troglodytes galactose-3-O-sulfotransferase 1 (LOC458758), mRNA Length = 1353 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 gcagcatctcagacacctcgg 240 ||||||||||||||||||||| Sbjct: 85 gcagcatctcagacacctcgg 65
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence Length = 74841 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 ggatggacttgttggacatgt 640 ||||||||||||||||||||| Sbjct: 19880 ggatggacttgttggacatgt 19900
>gb|AC146521.2| Oryza sativa chromosome 3 B1246D11 genomic sequence, complete sequence Length = 43277 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 cccgtcgtcctcgtcctccaa 554 ||||||||||||||||||||| Sbjct: 30775 cccgtcgtcctcgtcctccaa 30755
>gb|AC146026.2| Pan troglodytes BAC clone RP43-120F17 from 7, complete sequence Length = 169511 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 309 tgatagttccaggccagcttcctga 333 ||||||||||||||||||| ||||| Sbjct: 106118 tgatagttccaggccagctccctga 106142
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 tgcgccccggccgcagcagcg 396 ||||||||||||||||||||| Sbjct: 2009233 tgcgccccggccgcagcagcg 2009253
>gb|AC154371.2| Mus musculus BAC clone RP23-102A13 from chromosome 14, complete sequence Length = 206234 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 618 aaggatggacttgttggacat 638 ||||||||||||||||||||| Sbjct: 201214 aaggatggacttgttggacat 201194
>gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172188 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 84 cacacagaccatgtctcttctctgctact 112 |||||||||||| | |||||||||||||| Sbjct: 118938 cacacagaccatctttcttctctgctact 118966
>gb|AC154832.2| Mus musculus BAC clone RP24-568D4 from chromosome 14, complete sequence Length = 134900 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 618 aaggatggacttgttggacat 638 ||||||||||||||||||||| Sbjct: 35395 aaggatggacttgttggacat 35375
>dbj|AK111042.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B05, full insert sequence Length = 1115 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 443 ctcctcgccgctagtcgaccacaacccgtcgatgaagttgagcag 487 |||||||||||| || ||||||| ||||||| ||||||||||| Sbjct: 650 ctcctcgccgctggttgaccacagaccgtcgacaaagttgagcag 694
>gb|AC126434.4| Mus musculus BAC clone RP24-574E7 from 7, complete sequence Length = 206087 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 aaggatggacttgttggacat 638 ||||||||||||||||||||| Sbjct: 139296 aaggatggacttgttggacat 139316
>gb|AC152956.1| Mus musculus 6 BAC RP23-261F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 177077 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 20906 aggatggacttgttggacat 20887
>gb|AC121261.9| Mus musculus chromosome 7, clone RP24-69L13, complete sequence Length = 163319 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 11363 aggatggacttgttggacat 11382
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence Length = 197609 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 139051 aggatggacttgttggacat 139070
>gb|AC154202.2| Mus musculus BAC clone RP24-386E14 from chromosome 14, complete sequence Length = 147957 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 104032 aggatggacttgttggacat 104013
>gb|AC159428.1| Trypanosoma brucei chromosome 8 clone RPCI93-28A12, complete sequence Length = 154096 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tctgcatttgtccttgtttt 76 |||||||||||||||||||| Sbjct: 144551 tctgcatttgtccttgtttt 144570
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tctgcatttgtccttgtttt 76 |||||||||||||||||||| Sbjct: 2471645 tctgcatttgtccttgtttt 2471664
>gb|AC151601.5| Mus musculus BAC clone RP23-241H10 from chromosome 7, complete sequence Length = 187463 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 125866 aggatggacttgttggacat 125847
>gb|AC120559.10| Mus musculus chromosome 9, clone RP24-566A4, complete sequence Length = 141300 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 97568 aggatggacttgttggacat 97587
>gb|AC124597.5| Mus musculus BAC clone RP23-21K1 from chromosome 6, complete sequence Length = 185242 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 74842 aggatggacttgttggacat 74861
>gb|AC162164.7| Mus musculus chromosome 7, clone RP23-308C18, complete sequence Length = 187253 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 127285 aggatggacttgttggacat 127304
>gb|AC140460.3| Mus musculus BAC clone RP24-151D4 from chromosome 9, complete sequence Length = 196545 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 77378 aggatggacttgttggacat 77359
>gb|DQ058625.1| Camellia japonica RNA polymerase II second largest subunit (RPB2) gene, exons 2 through 11 and partial cds Length = 2969 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtaacccatatatacatgcatgtc 373 |||||||||| ||||||||||||| Sbjct: 2447 gtaacccatagatacatgcatgtc 2424
>gb|AC090889.3| Canis familiaris clone RP81-156O18, complete sequence Length = 146276 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gctccgtagcagcatctcagacac 235 ||||||||||||||| |||||||| Sbjct: 104978 gctccgtagcagcatttcagacac 104955
>gb|AC125268.10| Mus musculus chromosome 1, clone RP23-127L7, complete sequence Length = 233529 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 73996 aggatggacttgttggacat 73977
>gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, complete sequence Length = 134739 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ctgtatccctgggaacagag 291 |||||||||||||||||||| Sbjct: 99209 ctgtatccctgggaacagag 99190
>gb|AY556469.1| Sus scrofa histone deacetylase 5 (HDAC5) gene, partial cds Length = 1024 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gaggtgatagttccaggccagctt 328 |||||||||| ||||||||||||| Sbjct: 386 gaggtgatagctccaggccagctt 409
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 74321 aggatggacttgttggacat 74302
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 115936 aggatggacttgttggacat 115917
>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence Length = 234420 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 202964 aggatggacttgttggacat 202983
>gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosome 14, complete sequence Length = 173736 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 27092 aggatggacttgttggacat 27073
>gb|AC140441.3| Mus musculus BAC clone RP23-82A21 from chromosome 5, complete sequence Length = 177052 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 139795 aggatggacttgttggacat 139814
>gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosome 8, complete sequence Length = 234158 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 40849 aggatggacttgttggacat 40868
>gb|AC115797.16| Mus musculus chromosome 17, clone RP23-405J10, complete sequence Length = 193909 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 28239 aggatggacttgttggacat 28258
>gb|AC108951.4| Mus musculus BAC clone RP24-136D23 from 3, complete sequence Length = 148219 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 21295 aggatggacttgttggacat 21276
>gb|AC107859.7| Mus musculus chromosome 15, clone RP23-19C9, complete sequence Length = 208355 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 187487 aggatggacttgttggacat 187506
>gb|AC134392.5| Mus musculus chromosome 16, clone RP24-346N12, complete sequence Length = 170666 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 147718 aggatggacttgttggacat 147699
>emb|AL603831.23| Human DNA sequence from clone RP11-486H9 on chromosome 10 Contains the 3' end of the gene for adenovirus 5 E1A binding protein (BS69), the gene for a novel protein (KIAA0934) and four CpG islands, complete sequence Length = 179755 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 cttcctgaatgcctcccagcagca 349 ||||||||||| |||||||||||| Sbjct: 34349 cttcctgaatggctcccagcagca 34326
>gb|AC157100.10| Mus musculus 6 BAC RP24-459E13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 192228 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 123663 aggatggacttgttggacat 123682
>gb|AC157577.6| Mus musculus chromosome 1, clone RP24-145K21, complete sequence Length = 169199 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 158064 aggatggacttgttggacat 158083
>emb|AL691518.9| Mouse DNA sequence from clone RP23-267K1 on chromosome 11 Contains a CpG island, complete sequence Length = 114102 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 92666 aggatggacttgttggacat 92647
>emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chromosome 13 contains two novel genes, ribosomal protein L17 (Rpl17), S19 (Rps19) and L27A (Rpl27a) pseudogenes and a CpG island, complete sequence Length = 196857 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 133799 aggatggacttgttggacat 133818
>emb|BX890575.23| Zebrafish DNA sequence from clone CH211-235C4 in linkage group 14, complete sequence Length = 204730 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ttctctgaacacacagacca 94 |||||||||||||||||||| Sbjct: 55287 ttctctgaacacacagacca 55268
>gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-336B1, complete sequence Length = 218476 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 35808 aggatggacttgttggacat 35827
>gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, complete sequence Length = 226777 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 81192 aggatggacttgttggacat 81173
>gb|AC126687.3| Mus musculus BAC clone RP23-149L23 from chromosome 12, complete sequence Length = 186742 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 72230 aggatggacttgttggacat 72211
>gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome 3, complete sequence Length = 220855 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 114554 aggatggacttgttggacat 114535
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence Length = 202651 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 102455 aggatggacttgttggacat 102436
>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02, complete sequence Length = 172479 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgttcttggaggaattcca 180 |||||||||||||||||||| Sbjct: 126068 ccgttcttggaggaattcca 126049
>gb|AC151332.2| Xenopus tropicalis clone ISB-315C6, complete sequence Length = 97419 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cccagcagcagtaacccata 359 |||||||||||||||||||| Sbjct: 88239 cccagcagcagtaacccata 88258
>gb|AC154308.3| Mus musculus BAC clone RP23-370E2 from chromosome 16, complete sequence Length = 202348 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 8609 aggatggacttgttggacat 8590
>gb|AF282515.2|AF282515 Homo sapiens clone 10ptel_c8t3 sequence Length = 673 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 cttcctgaatgcctcccagcagca 349 ||||||||||| |||||||||||| Sbjct: 638 cttcctgaatggctcccagcagca 615
>gb|AC104035.6| Homo sapiens chromosome 15, clone RP11-661P17, complete sequence Length = 200370 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tctgcatttgtccttgtttt 76 |||||||||||||||||||| Sbjct: 107312 tctgcatttgtccttgtttt 107331
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cccggccgcagcagcgccgg 400 |||||||||||||||||||| Sbjct: 2032848 cccggccgcagcagcgccgg 2032867
>emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chromosome X, complete sequence Length = 205757 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 aacccatatatacatgcatg 371 |||||||||||||||||||| Sbjct: 118416 aacccatatatacatgcatg 118435
>emb|AL731647.13| Mouse DNA sequence from clone RP23-226L1 on chromosome X, complete sequence Length = 185319 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 64431 aggatggacttgttggacat 64412
>gb|AC154699.2| Mus musculus BAC clone RP24-344D19 from 9, complete sequence Length = 150348 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 19737 aggatggacttgttggacat 19756
>gb|AC154386.2| Mus musculus BAC clone RP23-27A13 from 13, complete sequence Length = 170110 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 11808 aggatggacttgttggacat 11789
>gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, complete sequence Length = 185083 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 28882 aggatggacttgttggacat 28863
>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete sequence Length = 260027 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgttcttggaggaattcca 180 |||||||||||||||||||| Sbjct: 142980 ccgttcttggaggaattcca 142961
>gb|AC113498.9| Mus musculus chromosome 1, clone RP23-366N18, complete sequence Length = 206252 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 139222 aggatggacttgttggacat 139203
>gb|AC162941.5| Mus musculus BAC clone RP23-78N5 from chromosome 9, complete sequence Length = 230344 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 150225 aggatggacttgttggacat 150244
>gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, complete sequence Length = 169072 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 162252 aggatggacttgttggacat 162233
>emb|CT033754.8| Mouse DNA sequence from clone RP23-174E11 on chromosome 9, complete sequence Length = 165339 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 76563 aggatggacttgttggacat 76544
>emb|AL845267.2| Mouse DNA sequence from clone RP23-426D2 on chromosome 2, complete sequence Length = 216597 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 92593 aggatggacttgttggacat 92612
>emb|CT009720.16| Mouse DNA sequence from clone RP23-21J17 on chromosome 9, complete sequence Length = 216098 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 114687 aggatggacttgttggacat 114668
>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete sequence Length = 176581 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 101496 aggatggacttgttggacat 101515
>emb|AL840627.7| Zebrafish DNA sequence from clone CH211-278B16 in linkage group 17, complete sequence Length = 164375 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tctcgacatcgtgtcgaaac 595 |||||||||||||||||||| Sbjct: 4991 tctcgacatcgtgtcgaaac 5010
>emb|BX897747.8| Zebrafish DNA sequence from clone DKEY-187J14 in linkage group 14, complete sequence Length = 217125 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ttcttggaggaattccatca 183 |||||||||||||||||||| Sbjct: 124508 ttcttggaggaattccatca 124489
>gb|AC120551.5| Mus musculus chromosome 1, clone RP24-338A22, complete sequence Length = 161994 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 75546 aggatggacttgttggacat 75565 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 2199 aggatggacttgttggacat 2218
>dbj|AB075972.1| Xenopus laevis mRNA, 3' UTR, clone:308a Length = 772 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ccagcagcagtaacccatat 360 |||||||||||||||||||| Sbjct: 374 ccagcagcagtaacccatat 393
>emb|AL928638.7| Mouse DNA sequence from clone RP23-377E1 on chromosome 2, complete sequence Length = 128608 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 66421 aggatggacttgttggacat 66402
>emb|AL845442.7| Mouse DNA sequence from clone RP23-392D9 on chromosome 2, complete sequence Length = 192013 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 114284 aggatggacttgttggacat 114303
>emb|AL844223.9| Mouse DNA sequence from clone RP23-468N9 on chromosome 4, complete sequence Length = 61897 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 26995 aggatggacttgttggacat 27014
>emb|AL833780.6| Mouse DNA sequence from clone RP23-24M22 on chromosome 2, complete sequence Length = 194630 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aggatggacttgttggacat 638 |||||||||||||||||||| Sbjct: 86873 aggatggacttgttggacat 86854 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,130,337 Number of Sequences: 3902068 Number of extensions: 5130337 Number of successful extensions: 123583 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122225 Number of HSP's gapped (non-prelim): 1355 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
