>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 493     acctttagtcctgcattctgcacaagttcacgaactt 529
               |||| ||| |||||||||||||| |||||||||||||
Sbjct: 2886230 acctctaggcctgcattctgcacgagttcacgaactt 2886194



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 459     gaaccggcctatccgaacacgtttcaa 485
               ||||| |||||||||||||||||||||
Sbjct: 2887076 gaacctgcctatccgaacacgtttcaa 2887050

>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0016I15, complete sequence
          Length = 166282

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 493   acctttagtcctgcattctgcacaagttcacgaactt 529
             |||| ||| |||||||||||||| |||||||||||||
Sbjct: 23717 acctctaggcctgcattctgcacgagttcacgaactt 23681



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 459   gaaccggcctatccgaacacgtttcaa 485
             ||||| |||||||||||||||||||||
Sbjct: 24563 gaacctgcctatccgaacacgtttcaa 24537

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 493     acctttagtcctgcattctgcacaagttcacgaactt 529
               |||| ||| |||||||||||||| |||||||||||||
Sbjct: 2886341 acctctaggcctgcattctgcacgagttcacgaactt 2886305



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 459     gaaccggcctatccgaacacgtttcaa 485
               ||||| |||||||||||||||||||||
Sbjct: 2887187 gaacctgcctatccgaacacgtttcaa 2887161

>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 493    acctttagtcctgcattctgcacaagttcacgaactt 529
              |||| ||| |||||||||||||| |||||||||||||
Sbjct: 158186 acctctaggcctgcattctgcacgagttcacgaactt 158150



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 459    gaaccggcctatccgaacacgtttcaa 485
              ||||| |||||||||||||||||||||
Sbjct: 159032 gaacctgcctatccgaacacgtttcaa 159006

>dbj|AK067387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099O15, full
            insert sequence
          Length = 3247

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 493  acctttagtcctgcattctgcacaagttcacgaactt 529
            |||| ||| |||||||||||||| |||||||||||||
Sbjct: 1187 acctctaggcctgcattctgcacgagttcacgaactt 1151



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 459  gaaccggcctatccgaacacgtttcaa 485
            ||||| |||||||||||||||||||||
Sbjct: 2033 gaacctgcctatccgaacacgtttcaa 2007

>gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, complete sequence
          Length = 166581

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 333    caccgctgtcagaaacagagcc 354
              ||||||||||||||||||||||
Sbjct: 126132 caccgctgtcagaaacagagcc 126111

>gb|AC156984.9| Mus musculus chromosome 5, clone RP23-418H8, complete sequence
          Length = 171080

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 333    caccgctgtcagaaacagagcc 354
              ||||||||||||||||||||||
Sbjct: 136267 caccgctgtcagaaacagagcc 136288

>gb|AC018366.39| Mus musculus strain 129/SvJ chromosome 5 clone mgs1-458e5, complete
             sequence
          Length = 126143

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 333   caccgctgtcagaaacagagcc 354
             ||||||||||||||||||||||
Sbjct: 25210 caccgctgtcagaaacagagcc 25189

>gb|AC018365.49| Mus musculus strain 129/SvJ clone mgs1-461b11 map 5, complete sequence
          Length = 117052

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 333   caccgctgtcagaaacagagcc 354
             ||||||||||||||||||||||
Sbjct: 57379 caccgctgtcagaaacagagcc 57400

>gb|AC141563.3| Mus musculus BAC clone RP23-410M22 from chromosome 6, complete sequence
          Length = 186983

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 386   tgccatctagtgccttgatgtcagc 410
             |||||||| ||||||||||||||||
Sbjct: 54536 tgccatcttgtgccttgatgtcagc 54512

>emb|AL109917.22|HSDJ140A9 Human DNA sequence from clone RP1-140A9 on chromosome 1p36.2-36.33
             Contains the 5' end of the GNB1 gene for guanine
             nucleotide binding protein (G protein) beta polypeptide 1,
             a novel gene, the gene for calmodulin-like protein
             (LOC163688), a novel gene (LOC339456), a novel gene
             (LOC348524), a novel gene (LOC339458, FLJ37323) , a novel
             gene ( LOC339459) similar to KIAA1751 and three CpG
             islands, complete sequence
          Length = 165191

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     caaaactgttggtaactgttt 24
             |||||||||||||||||||||
Sbjct: 81070 caaaactgttggtaactgttt 81090

>gb|AY332722.1| Homo sapiens insulin-like growth factor 1 receptor (IGF1R) gene,
             complete cds
          Length = 309626

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   ttatattcatccgcccacacc 336
             |||||||||||||||||||||
Sbjct: 35248 ttatattcatccgcccacacc 35228

>gb|AC118660.5| Homo sapiens chromosome 15, clone RP11-631H11, complete sequence
          Length = 167851

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 316    ttatattcatccgcccacacc 336
              |||||||||||||||||||||
Sbjct: 143856 ttatattcatccgcccacacc 143836

>gb|AF497794.1| Coleochaete nitellarum 18S ribosomal RNA gene, partial sequence
          Length = 1761

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 62 tttcacagtataaatcagttgatac 86
          |||||||||||||||||||| ||||
Sbjct: 66 tttcacagtataaatcagtttatac 42

>gb|AY211905.1| Coleochaete divergens 18S small subunit ribosomal RNA gene, partial
            sequence
          Length = 1743

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 62   tttcacagtataaatcagttgatac 86
            |||||||||||||||||||| ||||
Sbjct: 1682 tttcacagtataaatcagtttatac 1706

>gb|AY211901.1| Coleochaete sp. 18b3 18S small subunit ribosomal RNA gene, partial
            sequence
          Length = 1745

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 62   tttcacagtataaatcagttgatac 86
            |||||||||||||||||||| ||||
Sbjct: 1683 tttcacagtataaatcagtttatac 1707

>gb|AY211900.1| Coleochaete sp. 18a1 18S small subunit ribosomal RNA gene,
          partial sequence
          Length = 1747

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 62 tttcacagtataaatcagttgatac 86
          |||||||||||||||||||| ||||
Sbjct: 63 tttcacagtataaatcagtttatac 39

>gb|AY211896.1| Coleochaete sp. 327d3 18S small subunit ribosomal RNA gene, partial
            sequence
          Length = 1747

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 62   tttcacagtataaatcagttgatac 86
            |||||||||||||||||||| ||||
Sbjct: 1685 tttcacagtataaatcagtttatac 1709

>gb|AC159294.2| Mus musculus BAC clone RP23-287I15 from chromosome 12, complete sequence
          Length = 226841

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    gctagctagcctagctgaacatat 140
              ||||||||| ||||||||||||||
Sbjct: 214052 gctagctagactagctgaacatat 214029

>gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, complete sequence
          Length = 176662

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    atttcacagtataaatcagt 80
             ||||||||||||||||||||
Sbjct: 89067 atttcacagtataaatcagt 89048

>gb|AC154831.2| Mus musculus BAC clone RP24-556A11 from chromosome 12, complete
             sequence
          Length = 199712

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   gctagctagcctagctgaacatat 140
             ||||||||| ||||||||||||||
Sbjct: 21847 gctagctagactagctgaacatat 21824

>gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, complete sequence
          Length = 182420

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tttacatttcacagtataaa 75
             ||||||||||||||||||||
Sbjct: 62962 tttacatttcacagtataaa 62981


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,801,432
Number of Sequences: 3902068
Number of extensions: 3801432
Number of successful extensions: 59787
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59714
Number of HSP's gapped (non-prelim): 73
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)