| Clone Name | rbags8o03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 416 bits (210), Expect = e-113 Identities = 348/394 (88%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 1816 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 1757 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 1756 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 1697 Query: 307 accgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgat 366 ||| |||||||| ||||| || || |||| ||||||||||||||||||||||||||| | Sbjct: 1696 accatagctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgt 1637 Query: 367 tgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 |||||||||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 1636 tgcacgtttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 1577 Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 |||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 1576 tcctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 1517 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatactt 546 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1516 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatactt 1457 Query: 547 ctccttaacaagccgaccaagtttcttctcagct 580 ||||||||||||||| || ||||| ||||||||| Sbjct: 1456 ctccttaacaagccggcctagttttttctcagct 1423
>ref|XM_507519.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA Length = 2163 Score = 416 bits (210), Expect = e-113 Identities = 348/394 (88%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 1816 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 1757 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 1756 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 1697 Query: 307 accgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgat 366 ||| |||||||| ||||| || || |||| ||||||||||||||||||||||||||| | Sbjct: 1696 accatagctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgt 1637 Query: 367 tgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 |||||||||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 1636 tgcacgtttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 1577 Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 |||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 1576 tcctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 1517 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatactt 546 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1516 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatactt 1457 Query: 547 ctccttaacaagccgaccaagtttcttctcagct 580 ||||||||||||||| || ||||| ||||||||| Sbjct: 1456 ctccttaacaagccggcctagttttttctcagct 1423
>ref|XM_506897.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA Length = 2199 Score = 416 bits (210), Expect = e-113 Identities = 348/394 (88%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 1874 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 1815 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 1814 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 1755 Query: 307 accgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgat 366 ||| |||||||| ||||| || || |||| ||||||||||||||||||||||||||| | Sbjct: 1754 accatagctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgt 1695 Query: 367 tgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 |||||||||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 1694 tgcacgtttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 1635 Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 |||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 1634 tcctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 1575 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatactt 546 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1574 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatactt 1515 Query: 547 ctccttaacaagccgaccaagtttcttctcagct 580 ||||||||||||||| || ||||| ||||||||| Sbjct: 1514 ctccttaacaagccggcctagttttttctcagct 1481
>dbj|AK119608.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F07, full insert sequence Length = 2199 Score = 416 bits (210), Expect = e-113 Identities = 348/394 (88%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 1874 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 1815 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 1814 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 1755 Query: 307 accgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgat 366 ||| |||||||| ||||| || || |||| ||||||||||||||||||||||||||| | Sbjct: 1754 accatagctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgt 1695 Query: 367 tgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 |||||||||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 1694 tgcacgtttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 1635 Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 |||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 1634 tcctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 1575 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatactt 546 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1574 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatactt 1515 Query: 547 ctccttaacaagccgaccaagtttcttctcagct 580 ||||||||||||||| || ||||| ||||||||| Sbjct: 1514 ctccttaacaagccggcctagttttttctcagct 1481
>dbj|AK068513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154D06, full insert sequence Length = 2160 Score = 416 bits (210), Expect = e-113 Identities = 348/394 (88%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 1812 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 1753 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 1752 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 1693 Query: 307 accgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgat 366 ||| |||||||| ||||| || || |||| ||||||||||||||||||||||||||| | Sbjct: 1692 accatagctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgt 1633 Query: 367 tgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 |||||||||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 1632 tgcacgtttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 1573 Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 |||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 1572 tcctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 1513 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatactt 546 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1512 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatactt 1453 Query: 547 ctccttaacaagccgaccaagtttcttctcagct 580 ||||||||||||||| || ||||| ||||||||| Sbjct: 1452 ctccttaacaagccggcctagttttttctcagct 1419
>dbj|AK098984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E04, full insert sequence Length = 2140 Score = 408 bits (206), Expect = e-111 Identities = 347/394 (88%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 1815 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 1756 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 1755 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 1696 Query: 307 accgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgat 366 ||| |||||||| ||||| || || |||| ||||||||||||||||||||||||||| | Sbjct: 1695 accatagctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgt 1636 Query: 367 tgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 |||||||||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 1635 tgcacgtttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 1576 Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 |||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 1575 tcctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 1516 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatactt 546 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1515 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatactt 1456 Query: 547 ctccttaacaagccgaccaagtttcttctcagct 580 ||||||||| ||||| || ||||| ||||||||| Sbjct: 1455 ctccttaacgagccggcctagttttttctcagct 1422
>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full insert sequence Length = 2600 Score = 400 bits (202), Expect = e-108 Identities = 346/394 (87%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 2235 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 2176 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 2175 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 2116 Query: 307 accgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgat 366 ||| |||||||| ||||| || || |||| ||||||||||||||||||||||||||| | Sbjct: 2115 accatagctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgt 2056 Query: 367 tgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 |||||||||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 2055 tgcacgtttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 1996 Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 |||||||| ||||||||||||||||| ||||||||| | | || || ||||||||||| Sbjct: 1995 tcctcgaataaagacatcaaaagagttactgtaagcttggttgtcataacaaggcatggt 1936 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatactt 546 || ||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1935 gtggaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatactt 1876 Query: 547 ctccttaacaagccgaccaagtttcttctcagct 580 ||||||||||||||| || ||||| ||||||||| Sbjct: 1875 ctccttaacaagccggcctagttttttctcagct 1842
>gb|AY105608.1| Zea mays PCO070562 mRNA sequence Length = 1988 Score = 252 bits (127), Expect = 1e-63 Identities = 331/399 (82%) Strand = Plus / Minus Query: 182 gaaacttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttg 241 |||||||| ||| |||||||||| |||||||| ||||| || || ||||||||||||||| Sbjct: 1696 gaaacttacggcacgagcctctgcgggtcgcgcgggaacagggaggtcttcctgatgttg 1637 Query: 242 ttgagggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgagga 301 || ||||| ||||||||||| ||||| |||||||| || ||||| |||||||| || || Sbjct: 1636 ttcagggcacagaacagcatcaccaccctctccaaacccaccccgaaaccgccgtgtggc 1577 Query: 302 ggtgcaccgtagctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacac 361 || | || |||||||| ||||||||||| | | ||||| ||| | || ||||||||| Sbjct: 1576 ggcacgccatagctgaaggattcaatgtaggccgagatagtgctcacgtcgattccacac 1517 Query: 362 tcgattgcacgtttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatt 421 || | || || || ||| || ||||| || ||||| ||||| |||||||| || || Sbjct: 1516 tctgtcgcgcgcttggccagcagctcaggagtgtgtatcctttgtgctccagatattatc 1457 Query: 422 tcctcacctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggc 481 ||||| ||||||||||||||||||||||| ||| |||| ||||| | || || |||||| Sbjct: 1456 tcctcgcctcgaatgaagacatcaaaagaattggtgtacgctgggttgtcataacaaggc 1397 Query: 482 atggtgtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgcca 541 ||||||||||| || || |||||||||||||| ||||| ||||||||||| |||||| || Sbjct: 1396 atggtgtagaacggacgtacagccaaaggataccgatacaggatgaaaaaatctgtgtca 1337 Query: 542 tacttctccttaacaagccgaccaagtttcttctcagct 580 ||||| ||| | ||||||||||||||||| ||||||||| Sbjct: 1336 tacttttccctgacaagccgaccaagttttttctcagct 1298
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 8e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 28136866 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 28136807 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 28136806 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 28136747 Query: 307 accgtagct 315 ||| ||||| Sbjct: 28136746 accatagct 28136738 Score = 147 bits (74), Expect = 5e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 ||||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 28135866 acctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 28135807 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatac 544 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 28135806 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatac 28135749 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 314 ctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgattgcacgt 373 ||||| ||||| || || |||| ||||||||||||||||||||||||||| |||||||| Sbjct: 28136605 ctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgttgcacgt 28136546 Query: 374 ttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 ||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 28136545 ttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 28136493 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 540 catacttctccttaacaagccgaccaagtttcttctcagct 580 |||||||||||||||||||||| || ||||| ||||||||| Sbjct: 28135671 catacttctccttaacaagccggcctagttttttctcagct 28135631 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 206 gggtcgcgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataacc 265 |||||||| ||||| || || | ||||||||||||| |||| ||||||| ||||| ||| Sbjct: 2128363 gggtcgcgtgggaagagagaagccttcctgatgttgccgaggccgcagaagagcatcacc 2128304 Query: 266 actctctccaacccgac 282 || ||||||| |||||| Sbjct: 2128303 accctctccagcccgac 2128287
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 153 bits (77), Expect = 8e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 187 ttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgttgag 246 ||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 126513 ttatggcaccagcctttgtggatcgcgagggaaaagtgatgtcttcctgatgttgtttag 126454 Query: 247 ggcgcagaacagcataaccactctctccaacccgaccccaaaaccgccatgaggaggtgc 306 ||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 126453 ggcgcagaacagcattaccaccctctccaggccgacaccaaaaccaccatgaggaggtgc 126394 Query: 307 accgtagct 315 ||| ||||| Sbjct: 126393 accatagct 126385 Score = 147 bits (74), Expect = 5e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 ||||||||| ||||||||||||||||| ||||||||||| | || || ||||||||||| Sbjct: 125513 acctcgaataaagacatcaaaagagttactgtaagctgggttgtcataacaaggcatggt 125454 Query: 487 gtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattctgtgccatac 544 |||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 125453 gtagaagggacgcacagccaaaggataccgatagaggatgaaaaattctgttccatac 125396 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 314 ctgaatgattcaatgtacgatgcaatagtactcgcatcaattccacactcgattgcacgt 373 ||||| ||||| || || |||| ||||||||||||||||||||||||||| |||||||| Sbjct: 126252 ctgaacgattcgatatatgatgaaatagtactcgcatcaattccacactctgttgcacgt 126193 Query: 374 ttcctcagaagttcaggcgtatgtattctttgcgctccagaaataatttcctc 426 ||| ||| || || || |||||||||||| |||||||| || |||||||| Sbjct: 126192 ttcgtcaatagctctggtaaatgtattctttgtgctccagatattatttcctc 126140 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 540 catacttctccttaacaagccgaccaagtttcttctcagct 580 |||||||||||||||||||||| || ||||| ||||||||| Sbjct: 125318 catacttctccttaacaagccggcctagttttttctcagct 125278
>ref|NM_119268.3| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ nucleic acid binding / tRNA ligase AT4G31180 transcript variant AT4G31180.2 mRNA, complete cds Length = 2073 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 422 tcctcacctcgaatgaagacatcaaaagagttgctgtaa 460 |||||||||| ||||||||||||||||||||||||||| Sbjct: 1638 tcctcacctctgatgaagacatcaaaagagttgctgtaa 1600
>ref|NM_179227.1| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ nucleic acid binding / tRNA ligase AT4G31180 transcript variant AT4G31180.1 mRNA, complete cds Length = 2094 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 422 tcctcacctcgaatgaagacatcaaaagagttgctgtaa 460 |||||||||| ||||||||||||||||||||||||||| Sbjct: 1659 tcctcacctctgatgaagacatcaaaagagttgctgtaa 1621
>gb|AY072331.1| Arabidopsis thaliana aspartate--tRNA ligase - like protein (At4g31180) mRNA, complete cds Length = 1496 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 422 tcctcacctcgaatgaagacatcaaaagagttgctgtaa 460 |||||||||| ||||||||||||||||||||||||||| Sbjct: 1124 tcctcacctctgatgaagacatcaaaagagttgctgtaa 1086
>emb|BX827589.1|CNS0A2S7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1903 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 422 tcctcacctcgaatgaagacatcaaaagagttgctgtaa 460 |||||||||| ||||||||||||||||||||||||||| Sbjct: 1619 tcctcacctctgatgaagacatcaaaagagttgctgtaa 1581
>gb|BT002567.1| Arabidopsis thaliana aspartate--tRNA ligase - like protein (At4g31180) mRNA, complete cds Length = 1271 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 422 tcctcacctcgaatgaagacatcaaaagagttgctgtaa 460 |||||||||| ||||||||||||||||||||||||||| Sbjct: 983 tcctcacctctgatgaagacatcaaaagagttgctgtaa 945
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 431 cgaatgaagacatcaaaagagttgctgtaa 460 |||||||||||||||||||||||||||||| Sbjct: 42627 cgaatgaagacatcaaaagagttgctgtaa 42656
>ref|NM_118821.4| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ nucleic acid binding / tRNA ligase AT4G26870 mRNA, complete cds Length = 1851 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 212 cgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataaccactctc 271 |||||||| ||||| || || | |||||| |||||||| || || ||||| ||||| | | Sbjct: 1603 cgagggaatagcgaagttttgcggatgttattgagggcacataagagcattaccacacgc 1544 Query: 272 tccaacccgaccccaaaaccgccatgaggaggtgcaccgtagctgaatgattcaatgtac 331 |||| ||| || || || || || ||||| ||||||||||| ||||||| ||||||||| Sbjct: 1543 tccagccccactccgaatccaccgtgaggtggtgcaccgtacctgaatgcatcaatgtac 1484 Query: 332 g 332 | Sbjct: 1483 g 1483 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 atgaagacatcaaaagagttgctgta 459 ||||||||||| |||||||||||||| Sbjct: 1381 atgaagacatcgaaagagttgctgta 1356
>ref|XM_464087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1527 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 206 gggtcgcgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataacc 265 |||||||| ||||| || || | ||||||||||||| |||| ||||||| ||||| ||| Sbjct: 1508 gggtcgcgtgggaagagagaagccttcctgatgttgccgaggccgcagaagagcatcacc 1449 Query: 266 actctctccaacccgac 282 || ||||||| |||||| Sbjct: 1448 accctctccagcccgac 1432
>gb|BT000939.1| Arabidopsis thaliana clone C105093 putative aspartate-tRNA ligase (At4g26870) mRNA, complete cds Length = 1630 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 212 cgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataaccactctc 271 |||||||| ||||| || || | |||||| |||||||| || || ||||| ||||| | | Sbjct: 1574 cgagggaatagcgaagttttgcggatgttattgagggcacataagagcattaccacacgc 1515 Query: 272 tccaacccgaccccaaaaccgccatgaggaggtgcaccgtagctgaatgattcaatgtac 331 |||| ||| || || || || || ||||| ||||||||||| ||||||| ||||||||| Sbjct: 1514 tccagccccactccgaatccaccgtgaggtggtgcaccgtacctgaatgcatcaatgtac 1455 Query: 332 g 332 | Sbjct: 1454 g 1454 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 atgaagacatcaaaagagttgctgta 459 ||||||||||| |||||||||||||| Sbjct: 1352 atgaagacatcgaaagagttgctgta 1327
>gb|AY063809.1| Arabidopsis thaliana At4g26870 mRNA sequence Length = 1829 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 212 cgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataaccactctc 271 |||||||| ||||| || || | |||||| |||||||| || || ||||| ||||| | | Sbjct: 1599 cgagggaatagcgaagttttgcggatgttattgagggcacataagagcattaccacacgc 1540 Query: 272 tccaacccgaccccaaaaccgccatgaggaggtgcaccgtagctgaatgattcaatgtac 331 |||| ||| || || || || || ||||| ||||||||||| ||||||| ||||||||| Sbjct: 1539 tccagccccactccgaatccaccgtgaggtggtgcaccgtacctgaatgcatcaatgtac 1480 Query: 332 g 332 | Sbjct: 1479 g 1479 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 atgaagacatcaaaagagttgctgta 459 ||||||||||| |||||||||||||| Sbjct: 1377 atgaagacatcgaaagagttgctgta 1352
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 206 gggtcgcgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataacc 265 |||||||| ||||| || || | ||||||||||||| |||| ||||||| ||||| ||| Sbjct: 43056 gggtcgcgtgggaagagagaagccttcctgatgttgccgaggccgcagaagagcatcacc 42997 Query: 266 actctctccaacccgac 282 || ||||||| |||||| Sbjct: 42996 accctctccagcccgac 42980
>dbj|AK121266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D18, full insert sequence Length = 2121 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 206 gggtcgcgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataacc 265 |||||||| ||||| || || | ||||||||||||| |||| ||||||| ||||| ||| Sbjct: 1971 gggtcgcgtgggaagagagaagccttcctgatgttgccgaggccgcagaagagcatcacc 1912 Query: 266 actctctccaacccgac 282 || ||||||| |||||| Sbjct: 1911 accctctccagcccgac 1895
>dbj|AK107052.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-D03, full insert sequence Length = 780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 206 gggtcgcgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataacc 265 |||||||| ||||| || || | ||||||||||||| |||| ||||||| ||||| ||| Sbjct: 636 gggtcgcgtgggaagagagaagccttcctgatgttgccgaggccgcagaagagcatcacc 577 Query: 266 actctctccaacccgac 282 || ||||||| |||||| Sbjct: 576 accctctccagcccgac 560
>dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT16I07, TM0040, complete sequence Length = 92281 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 427 acctcgaatgaagacatcaaaagagttgctgtaagctggatcatcgtagcaaggcatggt 486 ||||| ||| ||||||||||| |||||| |||||||||||| || ||||| ||||| || Sbjct: 34849 acctctaataaagacatcaaatgagttggtgtaagctggattgtcatagcagggcattgt 34790 Query: 487 gtagaaagggcgcacagccaaagg 510 ||||| || | ||||||||||| Sbjct: 34789 atagaatggtcttacagccaaagg 34766
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 434 atgaagacatcaaaagagttgctgtaa 460 ||||||||||||||||||||||||||| Sbjct: 114799 atgaagacatcaaaagagttgctgtaa 114773
>gb|BT019019.1| Zea mays clone Contig518.F mRNA sequence Length = 1464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 183 aaacttatggcgcgagcctctgtgggtcgcgagggaaaagcgatgtcttcctgatgttgt 242 ||||||| ||| ||||||| || |||||||| ||||| || || || ||||||||||||| Sbjct: 1264 aaacttacggcccgagcctttgcgggtcgcgcgggaacagggaggttttcctgatgttgt 1205 Query: 243 tgaggg 248 | |||| Sbjct: 1204 tcaggg 1199 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 476 caaggcatggtgtagaaagggcgcacagccaaaggatatcgatagaggatgaaaaattct 535 |||||||||| ||| || || || ||||||||||||| |||| ||||| ||||| ||| Sbjct: 971 caaggcatggggtaaaacggacgtccagccaaaggataccgatccaggataaaaaaatct 912 Query: 536 gtgccatacttctccttaacaagccgaccaagtttcttctca 577 | | ||||||| ||| | ||||||| ||||| ||| |||||| Sbjct: 911 gggtcatacttttccctgacaagccaaccaatttttttctca 870
>ref|XM_744301.1| Aspergillus fumigatus Af293 aspartyl-tRNA synthetase (Afu2g02590) partial mRNA Length = 1668 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 404 tgcgctccagaaataatttcctcacctcgaatgaagacatcaaaagagtt 453 ||||||||||| || |||||||| || || ||||||| |||| ||||||| Sbjct: 1445 tgcgctccagacatgatttcctcgccacgcatgaagaaatcataagagtt 1396
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 atgaagacatcaaaagagttgctgta 459 ||||||||||| |||||||||||||| Sbjct: 11064 atgaagacatcgaaagagttgctgta 11039 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 212 cgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataaccactctc 271 |||||||| ||||| || || | |||||| |||||||| || || ||||| ||||| | | Sbjct: 11449 cgagggaatagcgaagttttgcggatgttattgagggcacataagagcattaccacacgc 11390 Query: 272 tccaacccgaccccaaaaccgccatgaggaggtgcaccgta 312 |||| ||| || || || || || ||||| ||||||||||| Sbjct: 11389 tccagccccactccgaatccaccgtgaggtggtgcaccgta 11349
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 atgaagacatcaaaagagttgctgta 459 ||||||||||| |||||||||||||| Sbjct: 55221 atgaagacatcgaaagagttgctgta 55196 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 212 cgagggaaaagcgatgtcttcctgatgttgttgagggcgcagaacagcataaccactctc 271 |||||||| ||||| || || | |||||| |||||||| || || ||||| ||||| | | Sbjct: 55606 cgagggaatagcgaagttttgcggatgttattgagggcacataagagcattaccacacgc 55547 Query: 272 tccaacccgaccccaaaaccgccatgaggaggtgcaccgta 312 |||| ||| || || || || || ||||| ||||||||||| Sbjct: 55546 tccagccccactccgaatccaccgtgaggtggtgcaccgta 55506
>emb|BX827509.1|CNS0A2VF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1781 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 atgaagacatcaaaagagttgctgta 459 ||||||||||| |||||||||||||| Sbjct: 1373 atgaagacatcgaaagagttgctgta 1348
>ref|XM_703217.1| PREDICTED: Danio rerio similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS), transcript variant 4 (LOC564987), mRNA Length = 2327 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 478 aggcatggtgtagaaagggcgcacagcca 506 |||||||||||||||||| | |||||||| Sbjct: 1447 aggcatggtgtagaaaggcctcacagcca 1419 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 540 catacttctccttaacaagccgaccaag 567 ||||||||||||| ||||| |||||||| Sbjct: 1385 catacttctcctttacaagacgaccaag 1358
>ref|XM_703216.1| PREDICTED: Danio rerio similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS), transcript variant 3 (LOC564987), mRNA Length = 1804 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 478 aggcatggtgtagaaagggcgcacagcca 506 |||||||||||||||||| | |||||||| Sbjct: 924 aggcatggtgtagaaaggcctcacagcca 896 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 540 catacttctccttaacaagccgaccaag 567 ||||||||||||| ||||| |||||||| Sbjct: 862 catacttctcctttacaagacgaccaag 835
>ref|XM_681127.1| PREDICTED: Danio rerio similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS), transcript variant 1 (LOC564987), mRNA Length = 2300 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 478 aggcatggtgtagaaagggcgcacagcca 506 |||||||||||||||||| | |||||||| Sbjct: 1420 aggcatggtgtagaaaggcctcacagcca 1392 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 540 catacttctccttaacaagccgaccaag 567 ||||||||||||| ||||| |||||||| Sbjct: 1358 catacttctcctttacaagacgaccaag 1331
>emb|BX001069.5| Zebrafish DNA sequence from clone DKEY-280J14 in linkage group 9, complete sequence Length = 146096 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 478 aggcatggtgtagaaagggcgcacagcca 506 |||||||||||||||||| | |||||||| Sbjct: 43853 aggcatggtgtagaaaggcctcacagcca 43881
>ref|NM_120403.1| Arabidopsis thaliana protein binding / signal transducer AT5G03250 mRNA, complete cds Length = 1779 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 ccgaccaagtttcttctcag 578 |||||||||||||||||||| Sbjct: 907 ccgaccaagtttcttctcag 926
>ref|XM_638091.1| Dictyostelium discoideum hypothetical protein (DDB0203816), partial mRNA Length = 2724 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tgtcttcctgatgttgttga 245 |||||||||||||||||||| Sbjct: 302 tgtcttcctgatgttgttga 283
>gb|AC163722.6| Mus musculus BAC clone RP23-447O11 from chromosome 19, complete sequence Length = 178562 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gtagctgaatgattcaatgt 329 |||||||||||||||||||| Sbjct: 88273 gtagctgaatgattcaatgt 88292
>gb|AC159257.2| Mus musculus BAC clone RP24-86H20 from chromosome 5, complete sequence Length = 202099 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgaagatgatgacaaccatg 157 |||||||||||||||||||| Sbjct: 146727 tgaagatgatgacaaccatg 146708
>gb|BC075373.1| Xenopus tropicalis aspartyl-tRNA synthetase, mRNA (cDNA clone MGC:89086 IMAGE:7006117), complete cds Length = 2024 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 479 ggcatggtgtagaaagggcgcacagcca 506 |||||||||||||| || |||||||||| Sbjct: 1377 ggcatggtgtagaagggtcgcacagcca 1350
>gb|BC064273.1| Xenopus tropicalis aspartyl-tRNA synthetase, mRNA (cDNA clone MGC:76305 IMAGE:5379725), complete cds Length = 2023 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 479 ggcatggtgtagaaagggcgcacagcca 506 |||||||||||||| || |||||||||| Sbjct: 1374 ggcatggtgtagaagggtcgcacagcca 1347
>ref|XM_756821.1| Ustilago maydis 521 hypothetical protein (UM05767.1) partial mRNA Length = 4686 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 caagccgaccaagtttcttc 574 |||||||||||||||||||| Sbjct: 342 caagccgaccaagtttcttc 361
>gb|AC140551.8| Medicago truncatula clone mth2-80i8, complete sequence Length = 135244 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 tggtgaagatgatgacaaccatgg 158 |||||| ||||||||||||||||| Sbjct: 119723 tggtgatgatgatgacaaccatgg 119700
>gb|AC148097.7| Medicago truncatula clone mth2-15a20, complete sequence Length = 125098 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 tggtgaagatgatgacaaccatgg 158 |||||| ||||||||||||||||| Sbjct: 119516 tggtgatgatgatgacaaccatgg 119493
>ref|XM_503144.1| Yarrowia lipolytica CLIB122, YALI0D22264g predicted mRNA Length = 1695 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 479 ggcatggtgtagaaagggcgcacagcca 506 ||||||||||||||||| ||||| |||| Sbjct: 1397 ggcatggtgtagaaaggtcgcacggcca 1370
>emb|AL355611.11| Human DNA sequence from clone RP11-430K22 on chromosome 13 Contains a 60S ribosomal protein L12 (RPL12) pseudogene and a pseudogene similar to part of ribosomal protein S3A (RPS3A)(FTE1), complete sequence Length = 176939 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 aatgaagacatcaaaagagt 452 |||||||||||||||||||| Sbjct: 29102 aatgaagacatcaaaagagt 29121
>ref|NM_203975.1| Xenopus tropicalis aspartyl-tRNA synthetase (dars), mRNA Length = 2023 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 479 ggcatggtgtagaaagggcgcacagcca 506 |||||||||||||| || |||||||||| Sbjct: 1374 ggcatggtgtagaagggtcgcacagcca 1347
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 ccgaccaagtttcttctcag 578 |||||||||||||||||||| Sbjct: 78921 ccgaccaagtttcttctcag 78940
>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence Length = 220137 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tgaagatgatgacaaccatg 157 |||||||||||||||||||| Sbjct: 155416 tgaagatgatgacaaccatg 155435
>gb|AC093328.3| Homo sapiens chromosome 8, clone RP11-30J20, complete sequence Length = 163640 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 atgtcttcctgatgttgttg 244 |||||||||||||||||||| Sbjct: 37405 atgtcttcctgatgttgttg 37386
>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete sequence Length = 184201 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 gccatacttctccttaacaa 557 |||||||||||||||||||| Sbjct: 7129 gccatacttctccttaacaa 7110
>gb|AC115592.2| Dictyostelium discoideum chromosome 2 map 1-125959 strain AX4, complete sequence Length = 125958 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tgtcttcctgatgttgttga 245 |||||||||||||||||||| Sbjct: 36245 tgtcttcctgatgttgttga 36264
>gb|AF522065.1| Rhizobium sp. TAL1145 fructose 1,6 bisphosphate aldolase, fructose 1,6 bisphosphatase, transcription regulator, and transcription regulator genes, complete cds; and unknown genes Length = 5527 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 ctgatgttgttgagggcgcagaacagca 260 ||||||||||||| |||||||| ||||| Sbjct: 3015 ctgatgttgttgaaggcgcagatcagca 2988
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 ccgaccaagtttcttctcag 578 |||||||||||||||||||| Sbjct: 50060 ccgaccaagtttcttctcag 50079
>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218409 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 aagatgatgacaaccatgggtgca 163 ||||||||||||||| |||||||| Sbjct: 78718 aagatgatgacaaccctgggtgca 78695
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 479 ggcatggtgtagaaagggcgcacagcca 506 ||||||||||||||||| ||||| |||| Sbjct: 2826380 ggcatggtgtagaaaggtcgcacggcca 2826353 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,353,016 Number of Sequences: 3902068 Number of extensions: 4353016 Number of successful extensions: 71268 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71107 Number of HSP's gapped (non-prelim): 150 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)