>COBL7_ARATH (Q8GZ17) COBRA-like protein 7 precursor|
          Length = 661

 Score =  120 bits (302), Expect = 3e-27
 Identities = 63/112 (56%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
 Frame = -2

Query: 657 FAAMVMDKAYDGFEKAYSFNATAEG----NNTIFMQGLEGLNYLVKQTNMSG--SDYLVP 496
           F A+ M  A  GFEKAYSFNA+  G    NNTIFM+GL GLNYLV + +      +  +P
Sbjct: 532 FTAVQMKNAAPGFEKAYSFNASTIGINGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIP 591

Query: 495 GKQQSVLSFTKKPTPDIDVVAGDGFPTKVFFNGDECAMPQRFPIKSDGFRTH 340
           GKQQSV+SFTKK TP I+V  GDGFP+KVFFNG+EC++P   P++S   R H
Sbjct: 592 GKQQSVMSFTKKLTPGINVPGGDGFPSKVFFNGEECSLPTILPMRSSQHRKH 643

>CBL10_ARATH (Q9LJU0) COBRA-like protein 10 precursor|
          Length = 672

 Score =  114 bits (284), Expect = 3e-25
 Identities = 59/108 (54%), Positives = 72/108 (66%), Gaps = 4/108 (3%)
 Frame = -2

Query: 657 FAAMVMDKAYDGFEKAYSFNATA--EGNNTIFMQGLEGLNYLVKQTNMSGS--DYLVPGK 490
           F A+ M KA  G+E  YSFN T     N T+  QGL G+NYLV Q N +    D  VPGK
Sbjct: 543 FVAIDMGKAGPGYENVYSFNGTRVPPSNRTVIFQGLPGMNYLVGQVNGTNPLRDPPVPGK 602

Query: 489 QQSVLSFTKKPTPDIDVVAGDGFPTKVFFNGDECAMPQRFPIKSDGFR 346
           QQSV+SFTKK    +++  GDGFPTK+FFNG+ECA+P+ FP KS G R
Sbjct: 603 QQSVISFTKKNIKGLNIPEGDGFPTKLFFNGEECALPKHFPKKSSGHR 650

>CBL11_ARATH (Q9T045) COBRA-like protein 11 precursor|
          Length = 668

 Score =  103 bits (258), Expect = 3e-22
 Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
 Frame = -2

Query: 657 FAAMVMDKAYDGFEKAYSFNATA--EGNNTIFMQGLEGLNYLVKQTNMSGS--DYLVPGK 490
           F A+ + KA  G+E  YSFN +     N TIF QGL G+NYL+  TN +    D  +PGK
Sbjct: 533 FGALDLGKAGLGYENIYSFNGSRVPPKNQTIFFQGLPGMNYLIGITNGTNPARDPQIPGK 592

Query: 489 QQSVLSFTKKPTPDIDVVAGDGFPTKVFFNGDECAMPQRFPIKSDGFR 346
            QSV+SF KK    ++++ GDGFP +VFFNG+EC +P+ FP KS G R
Sbjct: 593 MQSVISFKKKNLGSLNIIGGDGFPKRVFFNGEECELPKYFPKKSSGMR 640

>COBL8_ARATH (Q9LIB6) COBRA-like protein 8 precursor|
          Length = 653

 Score =  103 bits (256), Expect = 6e-22
 Identities = 57/112 (50%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
 Frame = -2

Query: 657 FAAMVMDKAYDGFEKAYSFN----ATAEGNNTIFMQGLEGLNYLV--KQTNMSGSDYLVP 496
           F A+ +  A  GF+KAYSFN    A    N T+ M+GL GLNYL+  K       D+ +P
Sbjct: 524 FTAVELRNAAPGFQKAYSFNGSIIAVNGKNTTVLMEGLPGLNYLLAEKDGKNPSEDFRIP 583

Query: 495 GKQQSVLSFTKKPTPDIDVVAGDGFPTKVFFNGDECAMPQRFPIKSDGFRTH 340
           GKQQSV+SFTKK TP I V + DGFPTKV FNG EC++P   P  S+  R H
Sbjct: 584 GKQQSVISFTKKLTPGIKVGSKDGFPTKVLFNGQECSLPSVLP-TSNSHRKH 634

>COBL9_ARATH (Q9FJ13) COBRA-like protein 9 precursor|
          Length = 663

 Score =  102 bits (255), Expect = 8e-22
 Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
 Frame = -2

Query: 657 FAAMVMDK-AYDGFEKAYSFNAT---AEG--NNTIFMQGLEGLNYLVKQTNMSG---SDY 505
           F A+ M K A  GFEKAYSFNA+    +G  NNTIFM+GL GL+YLV + +       + 
Sbjct: 530 FLAVQMKKPALLGFEKAYSFNASLLSVDGGVNNTIFMEGLPGLDYLVAEADEKDPKKKNI 589

Query: 504 LVPGKQQSVLSFTKKPTPDIDVVAGDGFPTKVFFNGDECAMPQRFPIKSDGFR 346
            +PGKQQSV+ F+KK TP I+V   DGFP KV FNG+EC +P   P+ S G R
Sbjct: 590 RIPGKQQSVIQFSKKLTPGINVAERDGFPAKVIFNGEECLLPDLLPMASGGRR 642

>COBL2_ARATH (Q8L8Q7) COBRA-like protein 2 precursor|
          Length = 441

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
 Frame = -2

Query: 648 MVMDKAYDGFEKAYSFNATAEG-----NNTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQ 484
           +V    +D   K +SFN          N+T  + G++  N  + Q    G+        Q
Sbjct: 321 VVQHPNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGN-------VQ 373

Query: 483 SVLSFTKKPTPDIDVVAGDGFPTKVFFNGDECAMP 379
           S L F K P  +     G  FP +++FNGD C MP
Sbjct: 374 SELLFQKNPL-EFTFEKGWAFPRRIYFNGDNCVMP 407

>COBL1_ARATH (Q9SRT7) COBRA-like protein 1 precursor|
          Length = 452

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
 Frame = -2

Query: 648 MVMDKAYDGFEKAYSFNAT-----AEGNNTIFMQGLEGLNYLVKQTNMSGS--DYLVPGK 490
           +V    +D   + +SFN       A  N+T  + G++  N L+ Q    G+    L+  K
Sbjct: 330 VVQHPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQK 389

Query: 489 QQSVLSFTKKPTPDIDVVAGDGFPTKVFFNGDECAMP 379
           + S  +F K          G  FP +++FNGD C MP
Sbjct: 390 EASAFTFEK----------GWAFPRRIYFNGDNCVMP 416

>COBRA_ARATH (Q94KT8) COBRA protein precursor (Cell expansion protein)|
          Length = 456

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
 Frame = -2

Query: 627 DGFEKAYSFNAT-----AEGNNTIFMQGLEGLNYLVKQTNMSGS--DYLVPGKQQSVLSF 469
           D   + +SFN       A  N+T  + G++  N  + +    G+    ++  K QS  +F
Sbjct: 342 DNITQIFSFNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTF 401

Query: 468 TKKPTPDIDVVAGDGFPTKVFFNGDECAMP 379
            K          G  FP +++FNGD C MP
Sbjct: 402 EK----------GWAFPRRIYFNGDNCVMP 421

>COBL4_ARATH (Q9LFW3) COBRA-like protein 4 precursor|
          Length = 431

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = -2

Query: 582 NNTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKPTPDIDVVAGDGFPTKVFF 403
           N+T    G +  N L+ +   SG+       Q+   +FT K         G  FP KV+F
Sbjct: 340 NDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQ--------GWAFPRKVYF 391

Query: 402 NGDECAMP 379
           NGDEC +P
Sbjct: 392 NGDECMLP 399

>COBL6_ARATH (O04500) COBRA-like protein 6 precursor|
          Length = 454

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 465 KKPTPDIDVVAGDGFPTKVFFNGDECAMP 379
           KK   +     G  FP ++ FNGDEC MP
Sbjct: 386 KKDMGNFTFREGWAFPRRILFNGDECVMP 414

>BCCP_CHLPN (Q9Z901) Biotin carboxyl carrier protein of acetyl-CoA carboxylase|
           (BCCP)
          Length = 167

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 392 SSPLKKTFVGNPSPATTSISGVGFLVNESTDCC 490
           SSPL  TF G+P+P + S    G +V+E T  C
Sbjct: 91  SSPLVGTFYGSPAPDSPSFVKPGDIVSEDTIVC 123

>MTN4_NEILA (P50182) Modification methylase NlaIV (EC 2.1.1.37)|
           (Cytosine-specific methyltransferase NlaIV) (M.NlaIV)
          Length = 423

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
 Frame = -2

Query: 576 TIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSV-----------LSFTKKPTPDIDVVAG 430
           T+ ++ LE L Y V    ++  D+ +P  ++ +           LSF   P+P +  +  
Sbjct: 140 TVILETLEALGYYVSWKVLNAKDFGIPQNRKRIYLTGSLKSKPDLSFETTPSPKLKNILE 199

Query: 429 DGFPTK 412
            G PT+
Sbjct: 200 SGLPTE 205

>RBL_CHLRE (P00877) Ribulose bisphosphate carboxylase large chain precursor|
           (EC 4.1.1.39) (RuBisCO large subunit)
          Length = 475

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
 Frame = -2

Query: 540 LVKQTNMSGSDYLVPGKQQSVLSFTKKPTPDIDVVAGDGFPTK-----VFFNGDECAMPQ 376
           L K   MSG D+L  G     L   ++ T     +  D +  K     ++F  D C+MP 
Sbjct: 314 LAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPG 373

Query: 375 RFPIKSDG 352
             P+ S G
Sbjct: 374 VMPVASGG 381


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,483,058
Number of Sequences: 219361
Number of extensions: 1864704
Number of successful extensions: 4675
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4665
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)