| Clone Name | rbags9a10 |
|---|---|
| Clone Library Name | barley_pub |
>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase 1) Length = 494 Score = 79.3 bits (194), Expect = 9e-15 Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 3/85 (3%) Frame = -1 Query: 664 KKYPKRVHHRGASIPHNGV---KYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDI 494 ++YP+ VHHRG+S+P V C GF++ S NPNILVGA++ GPD D F D Sbjct: 404 ERYPQHVHHRGSSLPSVQVHPNSIPCNAGFQYLYSSPPNPNILVGAILGGPDNRDSFSDD 463 Query: 493 RTNYNYTEPTLAANAGLVAALISLA 419 R NY +EP NA LV AL A Sbjct: 464 RNNYQQSEPATYINAPLVGALAFFA 488
>GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase) Length = 496 Score = 78.2 bits (191), Expect = 2e-14 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 4/84 (4%) Frame = -1 Query: 661 KYPKRVHHRGASIPHNGV---KYGCKGGFK-WRESKKANPNILVGAMVAGPDKHDGFKDI 494 KYPK++HHRG+SIP V K GC G + S NPN VGA+V GPD +D F D Sbjct: 409 KYPKQLHHRGSSIPSIKVHPAKVGCNAGLSDYYNSANPNPNTHVGAIVGGPDSNDRFNDA 468 Query: 493 RTNYNYTEPTLAANAGLVAALISL 422 R++Y++ EPT NA VA++ +L Sbjct: 469 RSDYSHAEPTTYINAAFVASISAL 492
>GUN2_PERAE (P23666) Endoglucanase 2 (EC 3.2.1.4) (Endo-1,4-beta-glucanase)| (Abscission cellulase 2) (Fragment) Length = 130 Score = 78.2 bits (191), Expect = 2e-14 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 3/85 (3%) Frame = -1 Query: 664 KKYPKRVHHRGASIPH---NGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDI 494 ++YP+ VHHRG+S+P + C GF++ S NPNILVGA++ GPD D F D Sbjct: 40 ERYPQHVHHRGSSLPSVHAHPNPIPCNAGFQYLYSSSPNPNILVGAILGGPDSRDSFSDD 99 Query: 493 RTNYNYTEPTLAANAGLVAALISLA 419 R NY +EP NA LV AL A Sbjct: 100 RNNYQQSEPATYINAPLVGALAFFA 124
>GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC| 3.2.1.4) Length = 484 Score = 77.4 bits (189), Expect = 4e-14 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Frame = -1 Query: 658 YPKRVHHRGASIPHNGVK---YGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRT 488 +PKR+HHR +S+P + ++ GC GGF+ ++ NPNIL GA+V GP+++DG+ D R Sbjct: 397 FPKRIHHRASSLPSHALRSQSLGCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRD 456 Query: 487 NYNYTEPTLAANAGLVAALISLA 419 +Y++ EP NA V L A Sbjct: 457 DYSHAEPATYINAAFVGPLAYFA 479
>GUNI_CLOTM (Q02934) Endoglucanase 1 precursor (EC 3.2.1.4) (Endoglucanase I)| (EGI) (Endo-1,4-beta-glucanase) (Cellulase I) Length = 879 Score = 42.7 bits (99), Expect = 0.001 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -1 Query: 655 PKRVHHRGASIPHNGVKYGCKGGFKWRESKKANP---NILVGAMVAGPDKHDGFKDIRTN 485 PKR HHR A +G W +S+ P ++L GA+V GPD D + D +N Sbjct: 444 PKRPHHRTA--------HG-----SWADSQMEPPEHRHVLYGALVGGPDSTDNYTDDISN 490 Query: 484 YNYTEPTLAANAGLVAALISL 422 Y E NAG V L + Sbjct: 491 YTCNEVACDYNAGFVGLLAKM 511
>GUNZ_CLOSR (P23659) Endoglucanase Z precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Thermoactive cellulase) (Avicelase I) Length = 986 Score = 42.4 bits (98), Expect = 0.001 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -1 Query: 655 PKRVHHRGASIPHNGVKYGCKGGFKWRESKKA---NPNILVGAMVAGPDKHDGFKDIRTN 485 PKR HHR A H+ W +S + ++L+GA+V GP K D + D N Sbjct: 396 PKRPHHRTA---HSS----------WADSMSVPDYHRHVLIGALVGGPGKDDSYTDDINN 442 Query: 484 YNYTEPTLAANAGLVAALISL 422 Y E NAG V AL + Sbjct: 443 YINNEVACDYNAGFVGALAKM 463
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 40.4 bits (93), Expect = 0.005 Identities = 28/81 (34%), Positives = 35/81 (43%) Frame = -1 Query: 658 YPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNYN 479 YP HHR A H+ N +L GA+V GP +D + D RT+Y Sbjct: 385 YPINPHHRAA---HHSTTNDINNPVN-------NLYLLKGALVGGPGSNDEYTDDRTDYI 434 Query: 478 YTEPTLAANAGLVAALISLAD 416 E NAG V AL SL + Sbjct: 435 SNEVATDYNAGFVGALASLVN 455
>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase A) (Cellulase A) Length = 1742 Score = 38.1 bits (87), Expect = 0.024 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -1 Query: 655 PKRVHHRGASIPHNGVKYGCKGGFKWRESKKA---NPNILVGAMVAGPDKHDGFKDIRTN 485 PKR HHR A H+ W +S+ + + L GA+V GP D + D +N Sbjct: 392 PKRPHHRTA---HSS----------WADSQSIPSYHRHTLYGALVGGPGSDDSYTDDISN 438 Query: 484 YNYTEPTLAANAGLVAALISL 422 Y E NAG V AL + Sbjct: 439 YVNNEVACDYNAGFVGALAKM 459
>GUNF_CLOTM (P26224) Endoglucanase F precursor (EC 3.2.1.4) (EGF)| (Endo-1,4-beta-glucanase) (Cellulase F) Length = 739 Score = 36.6 bits (83), Expect = 0.069 Identities = 19/44 (43%), Positives = 24/44 (54%) Frame = -1 Query: 553 NILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 422 +ILVGA+V GPD D + D +Y E NAG V AL + Sbjct: 420 HILVGALVGGPDGSDSYVDRLDDYQCNEVANDYNAGFVGALAKM 463
>GUNG_CLOCE (P37700) Endoglucanase G precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase G) (Cellulase G) (EGCCG) Length = 725 Score = 35.4 bits (80), Expect = 0.15 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -1 Query: 622 PHNGVKYGCKGGFKWRE---SKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAAN 452 PH+ +G W + S + + + GA+V GPD DG+ D NY E N Sbjct: 407 PHHRTAHG-----SWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYN 461 Query: 451 AGLVAALISL 422 AG AL + Sbjct: 462 AGFTGALAKM 471
>GUN4_THEFU (P26221) Endoglucanase E-4 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-4) (Cellulase E-4) (Cellulase E4) Length = 880 Score = 33.5 bits (75), Expect = 0.58 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = -1 Query: 622 PHNGVKYGCKGGFKWRESKKA---NPNILVGAMVAGP-DKHDGFKDIRTNYNYTEPTLAA 455 PH+ +G W +S + N ++L GA+V GP +D + D R +Y E Sbjct: 421 PHHRTAHG-----SWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDY 475 Query: 454 NAGLVAALISLAD 416 NAG +AL L + Sbjct: 476 NAGFSSALAMLVE 488
>GLO3_YEAST (P38682) ADP-ribosylation factor GTPase-activating protein GLO3| Length = 493 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -2 Query: 660 STPSVFITEGHQSLITVSNMDAKEVLNGESLRKQTLISSSEQ 535 STP +T+ S++T S K VLN + +K +++SSS + Sbjct: 205 STPKTTVTKTRSSILTASRK--KPVLNSQDKKKHSILSSSRK 244
>REL_CHICK (P16236) C-Rel proto-oncogene protein (C-Rel protein) (p68)| Length = 598 Score = 29.6 bits (65), Expect = 8.4 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 Query: 384 TPSSQQFPQCSRHPHHRRQLG 322 T SSQ +P CS+ PH QLG Sbjct: 349 TSSSQMYPPCSQMPHQPAQLG 369
>COAT_POPMV (Q02106) Coat protein (Capsid protein) (CP)| Length = 321 Score = 29.6 bits (65), Expect = 8.4 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 613 GVKYGCKGGFKWRESKKAN 557 G K+GC+ G KWRESK N Sbjct: 302 GGKFGCRVGTKWRESKCDN 320 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,711,703 Number of Sequences: 219361 Number of extensions: 1828863 Number of successful extensions: 4576 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4572 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)