ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bast50g11 | 448 | BY852189 | not_full | ref|NM_185174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 | 113 | not_full | C71E1_SORBI (O48958) Cytochrome P450 71E1 (EC 1.14.13.68) (4-hydroxyphenylacetaldehyde oxime monooxygenase) Length = 531 | 317 | -- | --- | 0 | -- | --- | 0 |
| bast50g10 | 341 | BY852188 | not_full | ref|XM_474042.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 | 144 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bast50g09 | 435 | BY852187 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 51 | not_full | TGA7_ARATH (Q93ZE2) Transcription factor TGA7 (AtbZIP50) Length = 368 | 24 | -- | --- | 0 | -- | --- | 0 |
| bast50g07 | 474 | BY852186 | not_full | gb|BT009027.1| Triticum aestivum clone wdk3c.pk021.e13:fis, full insert mRNA sequence Length = 1612 | 500 | not_full | SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II) Length = 582 | 55 | -- | --- | 0 | -- | --- | 0 |
| bast50g05 | 339 | BY852185 | not_full | gb|BT016792.1| Zea mays clone Contig625 mRNA sequence Length = 1862 | 11 | not_full | PACC_ASPFU (Q4WY67) pH-response transcription factor pacC/RIM101 Length = 676 | 96 | -- | --- | 0 | -- | --- | 0 |
| bast50g03 | 35 | BY852184 | not_full | gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence Length = 177967 | 9 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bast50g02 | 395 | BY852183 | not_full | ref|XM_469071.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1712 | 157 | not_full | LEU32_ARATH (P93832) 3-isopropylmalate dehydrogenase 2, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase 2) (IMDH 2) (3-IPM-DH 2) Length = 405 | 272 | -- | --- | 0 | -- | --- | 0 |
| bast50f12 | 323 | BY852182 | full | gb|AF161718.1|AF161718 Triticum aestivum Sec61p (sec61) mRNA, complete cds Length = 1630 | 244 | full | SC61A_HEMAM (Q8AY34) Protein transport protein Sec61 alpha subunit Length = 475 | 63 | -- | --- | 0 | -- | --- | 0 |
| bast50f11 | 423 | BY852181 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 36 | not_full | AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related protein complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 | 7 | -- | --- | 0 | -- | --- | 0 |
| bast50f10 | 377 | BY852180 | not_full | gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 | 92 | not_full | PQQE_METCA (Q608P0) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone biosynthesis protein E) Length = 373 | 6 | -- | --- | 0 | -- | --- | 0 |
| bast50f09 | 432 | BY852179 | not_full | gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 | 57 | not_full | CJ095_HUMAN (Q9H7T3) Protein C10orf95 Length = 257 | 4 | -- | --- | 0 | -- | --- | 0 |
| bast50f08 | 381 | BY852178 | not_full | ref|XM_493821.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 | 103 | not_full | KADC1_ARATH (Q9ZUU1) Probable adenylate kinase 1, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) Length = 284 | 126 | -- | --- | 0 | -- | --- | 0 |
| bast50f03 | 466 | BY852177 | not_full | gb|AY105627.1| Zea mays PCO089890 mRNA sequence Length = 1249 | 107 | not_full | LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4 precursor (LTBP-4) Length = 1666 | 67 | -- | --- | 0 | -- | --- | 0 |
| bast50f01 | 441 | BY852176 | not_full | dbj|AK109420.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D07, full insert sequence Length = 1257 | 52 | not_full | APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor Length = 534 | 19 | -- | --- | 0 | -- | --- | 0 |
| bast50e12 | 459 | BY852175 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | not_full | L_VSVJH (P13615) Large structural protein (L protein) (Transcriptase) (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2109 | 9 | -- | --- | 0 | -- | --- | 0 |
| bast50e11 | 353 | BY852174 | not_full | emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 | 140 | full | TIP11_ORYSA (P50156) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) Length = 250 | 56 | -- | --- | 0 | -- | --- | 0 |
| bast50e10 | 434 | BY852173 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 51 | not_full | RSBQ_BACSU (O07015) Sigma factor sigB regulation protein rsbQ Length = 269 | 34 | -- | --- | 0 | -- | --- | 0 |
| bast50e09 | 432 | BY852172 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 132 | not_full | COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin O-glucosyltransferase 2) Length = 489 | 31 | -- | --- | 0 | -- | --- | 0 |
| bast50e07 | 384 | BY852171 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | not_full | ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1) Length = 802 | 122 | -- | --- | 0 | -- | --- | 0 |
| bast50e04 | 436 | BY852170 | full | gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence Length = 1782 | 132 | not_full | FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor Length = 254 | 27 | -- | --- | 0 | -- | --- | 0 |
| bast50e03 | 417 | BY852169 | not_full | ref|XM_468529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1272 | 225 | not_full | PI4KA_HUMAN (P42356) Phosphatidylinositol 4-kinase alpha (EC 2.7.1.67) (PI4-kinase alpha) (PtdIns-4-kinase alpha) (PI4K-alpha) Length = 2044 | 5 | -- | --- | 0 | -- | --- | 0 |
| bast50e02 | 122 | BY852168 | not_full | emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chromosome 11 Contains the 5NULL end of a novel gene, three novel genes, the Slc6a4 gene for solute carrier family 6 (neurotransmitter transporter, serotonin) member 4, the Blmh gene for bleomycin | 91 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bast50e01 | 320 | BY852167 | not_full | ref|XM_478753.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 | 181 | not_full | PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 | 9 | -- | --- | 0 | -- | --- | 0 |
| bast50d12 | 423 | BY852166 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | not_full | CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor Length = 1745 | 68 | -- | --- | 0 | -- | --- | 0 |
| bast50d11 | 463 | BY852165 | not_full | dbj|AK071256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082L22, full insert sequence Length = 1717 | 88 | full | SYP61_ARATH (Q946Y7) Syntaxin-61 (AtSYP61) (Osmotic stress-sensitive mutant 1) Length = 245 | 29 | -- | --- | 0 | -- | --- | 0 |
| bast50d08 | 310 | BY852164 | not_full | gb|AF104107.1| Triticum aestivum small heat shock protein Hsp23.5 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 878 | 74 | not_full | RNF25_BOVIN (Q5E9N3) RING finger protein 25 (EC 6.3.2.-) Length = 458 | 28 | -- | --- | 0 | -- | --- | 0 |
| bast50d07 | 487 | BY852163 | not_full | gb|BT016808.1| Zea mays clone Contig641 mRNA sequence Length = 1417 | 500 | not_full | LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog Length = 152 | 17 | -- | --- | 0 | -- | --- | 0 |
| bast50d06 | 452 | BY852162 | full | emb|AJ536667.1|HVU536667 Hordeum vulgare mRNA for putative WRKY1 protein Length = 1454 | 75 | not_full | WRK40_ARATH (Q9SAH7) Probable WRKY transcription factor 40 (WRKY DNA-binding protein 40) Length = 302 | 46 | -- | --- | 0 | -- | --- | 0 |
| bast50d05 | 156 | BY852161 | not_full | gb|M27303.1|BLYCAMA Barley cam gene encoding calmodulin, complete cds Length = 1086 | 105 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bast50d04 | 442 | BY852160 | not_full | dbj|AB110192.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 21C4BG001 Length = 1460 | 53 | not_full | SEC9_KLULA (Q6CSD1) Protein transport protein SEC9 Length = 556 | 39 | -- | --- | 0 | -- | --- | 0 |
| bast50d03 | 172 | BY852159 | not_full | gb|U76744.1|TAU76744 Triticum aestivum beta-tubulin 1 (tubb1) mRNA, complete cds Length = 1485 | 500 | full | TBB1_MAIZE (P18025) Tubulin beta-1 chain (Beta-1 tubulin) Length = 446 | 371 | -- | --- | 0 | -- | --- | 0 |
| bast50d02 | 471 | BY852158 | not_full | gb|J00184.1|HUMHBA3 Homo sapiens HBZP pseudogene, exons 1, 3, 2 and complete cds Length = 2685 | 177 | not_full | EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein) Length = 283 | 145 | -- | --- | 0 | -- | --- | 0 |
| bast50d01 | 369 | BY852157 | not_full | ref|XM_482924.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 | 172 | not_full | GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-) (GID1-like protein 3) Length = 344 | 15 | -- | --- | 0 | -- | --- | 0 |
| bast50c12 | 455 | BY852156 | not_full | ref|NM_185174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 | 129 | not_full | C71E1_SORBI (O48958) Cytochrome P450 71E1 (EC 1.14.13.68) (4-hydroxyphenylacetaldehyde oxime monooxygenase) Length = 531 | 321 | -- | --- | 0 | -- | --- | 0 |
| bast50c11 | 454 | BY852155 | not_full | emb|AJ277097.1|HVU277097 Hordeum vulgare mRNA for putative kinetochore protein (cbf5 gene) Length = 1265 | 98 | not_full | DKC1_ARATH (Q9LD90) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140-associated protein of 57 kDa homolog) (AtNAP57) Length = 565 | 302 | -- | --- | 0 | -- | --- | 0 |
| bast50c10 | 274 | BY852154 | not_full | gb|AF467918.1| Danio rerio cardiac troponin T mRNA, complete cds, alternatively spliced Length = 1008 | 63 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bast50c09 | 345 | BY852153 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 27 | not_full | POLG_LANVT (P29837) Genome polyprotein [Contains: Capsid protein C (Core protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; | 15 | -- | --- | 0 | -- | --- | 0 |
| bast50c07 | 427 | BY852152 | not_full | dbj|AB044747.1| Phyllostachys edulis BA-ACO mRNA for 1-aminocyclopropane-1-carboxylate oxidase, complete cds Length = 1375 | 173 | not_full | ACCO1_ORYSA (Q40634) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 322 | 87 | -- | --- | 0 | -- | --- | 0 |
| bast50c06 | 430 | BY852151 | not_full | emb|AL590483.32| Human DNA sequence from clone RP11-278H7 on chromosome 1 Contains the 3NULL end of a novel gene (LOC339529), the ZNF238 gene for zinc finger protein 238, a novel gene and a CpG island, complete sequence Length = 98228 | 210 | not_full | DEND_HUMAN (O94850) Dendrin Length = 657 | 13 | -- | --- | 0 | -- | --- | 0 |
| bast50c05 | 482 | BY852150 | not_full | emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33 Length = 1277 | 62 | not_full | ANX4_FRAAN (P51074) Annexin-like protein RJ4 Length = 314 | 74 | -- | --- | 0 | -- | --- | 0 |
| bast50c04 | 433 | BY852149 | not_full | emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA Length = 1114 | 500 | not_full | RL5A_ORYSA (P49625) 60S ribosomal protein L5-1 Length = 304 | 93 | -- | --- | 0 | -- | --- | 0 |
| bast50c03 | 386 | BY852148 | not_full | gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds Length = 1704 | 124 | not_full | CHLP_SYNY3 (Q55087) Geranylgeranyl hydrogenase Length = 407 | 20 | -- | --- | 0 | -- | --- | 0 |
| bast50c02 | 374 | BY852147 | not_full | gb|BT009107.1| Triticum aestivum clone wkm2n.pk009.f17:fis, full insert mRNA sequence Length = 629 | 500 | not_full | THG_PETIN (Q40901) Gamma-thionin homolog PPT precursor Length = 78 | 35 | -- | --- | 0 | -- | --- | 0 |
| bast50c01 | 360 | BY852146 | not_full | gb|AF262984.1|AF262984 Triticum aestivum cyclophilin A-3 (CyP3) mRNA, complete cds Length = 869 | 398 | not_full | CYPH_MAIZE (P21569) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) Length = 172 | 280 | -- | --- | 0 | -- | --- | 0 |
| bast50b12 | 446 | BY852145 | not_full | gb|AY596554.1| Saccharum officinarum clone SCRFLR1012E12, complete sequence Length = 1197 | 239 | not_full | GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC 3.2.1.4) Length = 484 | 3 | -- | --- | 0 | -- | --- | 0 |
| bast50b11 | 454 | BY852144 | not_full | gb|AY339377.1| Oryza sativa (japonica cultivar-group) Ap24 mRNA, complete cds Length = 1089 | 330 | not_full | CD4_RABIT (P46630) T-cell surface glycoprotein CD4 precursor (T-cell surface antigen T4/Leu-3) Length = 459 | 5 | -- | --- | 0 | -- | --- | 0 |
| bast50b09 | 232 | BY852143 | not_full | ref|XM_469706.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1731 | 17 | not_full | YYAP1_HUMAN (Q9H869) YY1-associated protein 1 (Hepatocellular carcinoma susceptibility protein) (Hepatocellular carcinoma-associated protein 2) Length = 796 | 3 | -- | --- | 0 | -- | --- | 0 |
| bast50b08 | 454 | BY852142 | not_full | emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR) Length = 1490 | 96 | not_full | PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 | 40 | -- | --- | 0 | -- | --- | 0 |
| bast50b07 | 457 | BY852141 | not_full | ref|NM_188429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1896 | 26 | not_full | KCNN3_PIG (P58392) Small conductance calcium-activated potassium channel protein 3 (SK3) Length = 724 | 12 | -- | --- | 0 | -- | --- | 0 |
| bast50b06 | 400 | BY852140 | not_full | ref|XM_480938.1| Oryza sativa (japonica cultivar-group), mRNA Length = 606 | 44 | not_full | PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 | 392 | -- | --- | 0 | -- | --- | 0 |
